RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039813

Ensembl transcript IDs: ENSMUST00000084621.12, ENSMUST00000107750.2

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTaGTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGC +
Preference number: 1 (lower is better)
Translates to: GCLPTGSGEPSGLLP*SPPKPTLLAPQARC
Trigger: GCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp AGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTaGCCCCACAGGCCAGATGCAGGCCAGAGTGGATGCTTGCTCCAG +
Preference number: 1 (lower is better)
Translates to: SRVGCCPAPLPSLPC*PHRPDAGQSGCLLQ
Trigger: CTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 90 bp CCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATaGAGGCCAGAGTGGATGCTTGCTCCAGGTCCACTGTCCAGTCCA +
Preference number: 1 (lower is better)
Translates to: PCSPPKPTLLAPQAR*RPEWMLAPGPLSSP
Trigger: TGGACTGGACAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 90 bp TGTAAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTaGCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCA +
Preference number: 1 (lower is better)
Translates to: CKAAYQLALVSRVGC*PAPLPSLPCWPHRP
Trigger: TGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 90 bp AGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTGGATaGTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGG +
Preference number: 1 (lower is better)
Translates to: SLPCWPHRPDAGQSG*LLQVHCPVHIRFLR
Trigger: CCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp CCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTaGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCT +
Preference number: 1 (lower is better)
Translates to: PKPTLLAPQARCRPE*MLAPGPLSSPHQVP
Trigger: AGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp CCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATCAGGCTTaGCAGCAAGCACGCTTTCCTGCTGAGCCAGCTCACCAGCCCGAA +
Preference number: 1 (lower is better)
Translates to: PPLSVSQGSNSGHQA*QQARFPAEPAHQPE
Trigger: TTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTGATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR CCA 90 bp GAGAGGGCAAAGGCCTGGTCCAGGGTCACACACACCTCCCGCCCATaGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGAAAGGCTTTG +
Preference number: 1 (lower is better)
Translates to: ERAKAWSRVTHTSRP*LNSIFLPAKVRKAL
Trigger: CAAAGCCTTTCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTGTGTGTGACCCTGGACCAGGCCTTTGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 90 bp TCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTaGCACATAATGGTGACCAAGGCCTGGAGCCAGAGGGTGCCAGCG +
Preference number: 1 (lower is better)
Translates to: SGKTDALKMQALNLG*HIMVTKAWSQRVPA
Trigger: CGCTGGCACCCTCTGGCTCCAGGCCTTGGTCACCATTATGTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp GCTTGGCAGAGTTCTCCTCTAGGGAGAGTTGAGGAAGAGGAGAGGTaGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTT +
Preference number: 1 (lower is better)
Translates to: AWQSSPLGRVEEEER*GLWLGGGVVERALF
Trigger: AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTCTTCCTCAACTCTCCCTAGAGGAGAACTCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR TCA 90 bp ATCGAACTCAGGTCATCAGGCTTGGCAGCAAGCACGCTTTCCTGCTaGGCCAGCTCACCAGCCCGAAACTGTTCTGAAAGATCCAGTCTG +
Preference number: 1 (lower is better)
Translates to: IELRSSGLAASTLSC*ASSPARNCSERSSL
Trigger: CAGACTGGATCTTTCAGAACAGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTGATGACCTGAGTTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR GCA 90 bp GCAAGGATGTTGCTTTATGTCATCATGGCTCTGACAGGAGGATCCTaGATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: ARMLLYVIMALTGGS*MESEVSLSSSRPGQ
Trigger: CTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCATGCAGGATCCTCCTGTCAGAGCCATGATGACATAAAGCAACATCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp AGACGAAATCCAAACGGAATGGAAATGGTGGTGCCTCTCAGAGACTaGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGT +
Preference number: 1 (lower is better)
Translates to: RRNPNGMEMVVPLRD*SGDPACIPASCPVC
Trigger: ACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGAGAGGCACCACCATTTCCATTCCGTTTGGATTTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 90 bp GAAACTTGGGTAGGGGAGAAAAGGATTGTGGGTTCACTGATCAGTTaGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGC +
Preference number: 1 (lower is better)
Translates to: ETWVGEKRIVGSLIS*HLRVPPPLPQRNCS
Trigger: GCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTGATCAGTGAACCCACAATCCTTTTCTCCCCTACCCAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR TCA 90 bp GCTTTATGTCATCATGGCTCTGACAGGAGGATCCTGCATGGAGTCTaGGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATC +
Preference number: 1 (lower is better)
Translates to: ALCHHGSDRRILHGV*GQPEFLETWSEDEI
Trigger: GATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCATGCAGGATCCTCCTGTCAGAGCCATGATGACATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 90 bp GAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTaGGCCCCACAGGCCAGATGCAGGCCAGAGTGGATGCTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: EPSGLLPCSPPKPTL*APQARCRPEWMLAP
Trigger: TGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR TCA 90 bp GCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTATCCTGCATGGAGTCTaGGGTCAGCCTGAGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ALVSRVGCCPAPLPSLPCILHGV*GQPEFL
Trigger: GAGGAACTCAGGCTGACCTCAGACTCCATGCAGGAT...ACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR GCA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCGCCCCACAGGCCAGATaGAGGCCAGAGTGGATGCTT +
Preference number: 2 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPAPQAR*RPEWML
Trigger: AAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGC...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp CAGGCTTGGCAGCAAGCACGCTTTCCTGCTGAGCCAGCTCACCAGCCCGAAACTGGACCCCTGACTTCCTaGGCTGGCTGTGGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: QAWQQARFPAEPAHQPETGPLTS*AGCGAV
Trigger: CACTGCCCCACAGCCAGCCCAGGAAGTCAGGGGTCC...AGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CCA 90 bp CAGGCTTGGCAGCAAGCACGCTTTCCTGCTGAGCCAGCTCACCAGCCCGAAACTTTCCTGGGCTGGCTGTaGGGCAGTGGGCTGTGCACA +
Preference number: 2 (lower is better)
Translates to: QAWQQARFPAEPAHQPETFLGWL*GSGLCT
Trigger: TGTGCACAGCCCACTGCCCCACAGCCAGCCCAGGAA...AGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTATGGTGACCAAGGCCTaGAGCCAGAGGGTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: EERWGLWLGGGVVERALFMVTKA*SQRVPA
Trigger: CGCTGGCACCCTCTGGCTCCAGGCCTTGGTCACCAT...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp CCAAGAGTAGCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAGGCAGGGGCTCCCCTaGGATGACCCAGTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: PRVAEHKAQHCWNTVQLGRQGLP*DDPVGC
Trigger: ACAGCCCACTGGGTCATCCCAGGGGAGCCCCTGCCT...ACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGCTACTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR TCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTCTCCTGTCCTGTGTGTaGAAGTGCTCTGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: EERWGLWLGGGVVERALFLLSCV*KCSVGQ
Trigger: CTGCCCCACAGAGCACTTTCACACACAGGACAGGAG...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 90 bp GCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAAGAAAGCTGCGTaGGTCCCCCAAGGAGAAGCGCAAGTGCTTGGCAGAGTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AQHCWNTVQLGKKAA*VPQGEAQVLGRVLL
Trigger: GAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACCAACGCAGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR TCA 90 bp TGGGGGAGTAGTAGAAAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCACCTCCCGCCCATGGCTaGACTCTATCTTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: WGSSRKGTVYPAACAHSSPPAHG*TLSSCQ
Trigger: CTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGG...TGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTTTCTACTACTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp GGTCCCCCAAGGAGAAGCGCAAGTGCTTGGCAGAGTTCTCCTCTAGGGAGAGTTGTGCCTCTCAGAGACTaGTCAGGTGACCCAGCATGT +
Preference number: 2 (lower is better)
Translates to: GPPRRSASAWQSSPLGRVVPLRD*SGDPAC
Trigger: ACATGCTGGGTCACCTGACCAGTCTCTGAGAGGCAC...AACTCTCCCTAGAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp AGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTGCTGGCTGTGGGGCAGTaGGCTGTGCACAGACAGCCT +
Preference number: 2 (lower is better)
Translates to: SASSLASEELQQLFFRYLLAVGQ*AVHRQP
Trigger: AGGCTGTCTGTGCACAGCCCACTGCCCCACAGCCAG...CAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CCA 90 bp CCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTGCAGAACTGTCCAGGGACCTGACTTCCTGGGCTaGCTGTGGGGCAGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: PQRNCSNSSSDTCRTVQGPDFLG*LWGSGL
Trigger: CAGCCCACTGCCCCACAGCCAGCCCAGGAAGTCAGG...TCCCTGGACAGTTCTGCAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR GCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTGAATGGAAATGGTGGTaGCTCTCAGAGACTGGTCAG +
Preference number: 2 (lower is better)
Translates to: EERWGLWLGGGVVERALFEWKWW*LSETGQ
Trigger: CTGACCAGTCTCTGAGAGGCACCACCATTTCCATTC...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp TGGGGGAGTAGTAGAAAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCATGGGAGACTAAGGCCTaGAGAGGGCAAAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: WGSSRKGTVYPAACAHSSWETKA*RGQRPG
Trigger: ACCAGGCCTTTGCCCTCTCCAGGCCTTAGTCTCCCA...TGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTTTCTACTACTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTAGGCAGTGACACAGGCTaGCAAGCCTGGGAGACTAAG +
Preference number: 2 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLGSDTG*QAWETK
Trigger: CTTAGTCTCCCAGGCTTGCCAGCCTGTGTCACTGCC...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 90 bp CTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTaGGGGTGCCACATAATGGTGACCAAGGCCTGGAGCCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LLSGKTDALKMQALN*GCHIMVTKAWSQRV
Trigger: CACCCTCTGGCTCCAGGCCTTGGTCACCATTATGTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR GCA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCAAGGAGAAGCGCAAGTaGTTGGCAGAGTTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: PFLFLELTLWVCPQAVTAKEKRK*LAEFSS
Trigger: AGAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTT...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTACAGGCTGGCAAGCCTaGGAGACTAAGGCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLTGWQA*ETKAWR
Trigger: TCTCCAGGCCTTAGTCTCCCAGGCTTGCCAGCCTGT...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp CAGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCCGCAACCACCATGCCTaGCCCTTATTATCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: QLAPQSASSLASEELQQLRNHHA*PLLSFL
Trigger: CAAAAAGGATAATAAGGGCCAGGCATGGTGGTTGCG...GAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR TCA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTTCCTGCCAGCAAAGGTaGGAAAGGCTTTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLSCQQR*ERLWGQ
Trigger: CTGTCCCCAAAGCCTTTCTCACCTTTGCTGGCAGGA...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CCA 90 bp GTGGGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTTGTGAAAGTGCTCTGTaGGGCAGTGACACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: VGCKQKASFRHEAVEIVPCESAL*GSDTGW
Trigger: CCAGCCTGTGTCACTGCCCCACAGAGCACTTTCACA...AGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR TCA 90 bp AGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTAGGATCCTAAAACCCTaGCCTTGCATTTGGCTATTA +
Preference number: 2 (lower is better)
Translates to: SWHLRVPPPLPQRNCSNSRILKP*PCIWLL
Trigger: TAATAGCCAAATGCAAGGTCAGGGTTTTAGGATCCT...AGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR TCA 90 bp TCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTTCTTCAGATAAGCCCGAAACTGTTCTaGAAGATCCAGTCTGCTCGT +
Preference number: 2 (lower is better)
Translates to: SECLLPCLRGIAATLLQISPKLF*KIQSAR
Trigger: ACGAGCAGACTGGATCTTTCAGAACAGTTTCGGGCT...TATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR CAA 90 bp ATTCACGTATATGCCAGGTCAGAGAACACTTTTGGGAATCTGTTCTaGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATCAG +
Preference number: 2 (lower is better)
Translates to: IHVYARSENTFGNLF*PPLSVSQGSNSGHQ
Trigger: CTGATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCCAAAAGTGTTCTCTGACCTGGCATATACGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR GCA 72 bp CCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTaGTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAG +
Preference number: 3 (lower is better)
Translates to: PTGSGEPSGLLP*SPPKPTLLAPQ
Trigger: CTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp GGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTaGCCCCACAGGCCAGATGCAGGCCAGAGTGGATGC +
Preference number: 3 (lower is better)
Translates to: GCCPAPLPSLPC*PHRPDAGQSGC
Trigger: GCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 72 bp CCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATaGAGGCCAGAGTGGATGCTTGCTCCAGGTCCACTG +
Preference number: 3 (lower is better)
Translates to: PPKPTLLAPQAR*RPEWMLAPGPL
Trigger: CAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 72 bp GGCCCCACAGGCCAGATGCAGGCCAGAGTGGATGCTTaGTCCAGGTCCACTGTCCAGTCCACATCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: GPTGQMQARVDA*SRSTVQSTSGS
Trigger: GGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp ACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTaGATGCTTGCTCCAGGTCCACTGTCCAGTCCACAT +
Preference number: 3 (lower is better)
Translates to: TLLAPQARCRPE*MLAPGPLSSPH
Trigger: ATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp GTGTGTGAAAGTGCTCTGTGGGGCAGTGACACAGGCTaGCAAGCCTGGGAGACTAAGGCCTGGAGAGGGCAA +
Preference number: 3 (lower is better)
Translates to: VCESALWGSDTG*QAWETKAWRGQ
Trigger: TTGCCCTCTCCAGGCCTTAGTCTCCCAGGCTTGCCAGCCTGTGTCACTGCCCCACAGAGCACTTTCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp AAGGCCTGGTCCAGGGTCACACACACCTCCCGCCCATaGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: KAWSRVTHTSRP*LNSIFLPAKVR
Trigger: TCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTGTGTGTGACCCTGGACCAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp AGTGTGTCCCAGGGATCGAACTCAGGTCATCAGGCTTaGCAGCAAGCACGCTTTCCTGCTGAGCCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: SVSQGSNSGHQA*QQARFPAEPAH
Trigger: GTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTGATGACCTGAGTTCGATCCCTGGGACACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CAA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTCCCAAGCCTACCCTGTaGGCCCCACAGGCCAGATGC +
Preference number: 3 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLPKPTL*APQARC
Trigger: GCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGG...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp AGCTGCGTTGGTCCCCCAAGGAGAAGCGCAAGTGCTTaGCAGAGTTCTCCTCTAGGGAGAGTTGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: SCVGPPRRSASA*QSSPLGRVEEE
Trigger: CTCTTCCTCAACTCTCCCTAGAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACCAACGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp GCTGGAACACAGTGCAGCTTGGTAAGAAAGCTGCGTTaGTCCCCCAAGGAGAAGCGCAAGTGCTTGGCAGAG +
Preference number: 3 (lower is better)
Translates to: AGTQCSLVRKLR*SPKEKRKCLAE
Trigger: CTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACCAACGCAGCTTTCTTACCAAGCTGCACTGTGTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CAA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCTCAACTGCAAGGATGTaGCTTTATGTCATCATGGCT +
Preference number: 3 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPSTARM*LYVIMA
Trigger: AGCCATGATGACATAAAGCAACATCCTTGCAGTTGA...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR TCA 72 bp AATGGAAATGGTGGTGCCTCTCAGAGACTGGTCAGGTaGCCCAGCATGTATCCCTGCCTCCTGTCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: NGNGGASQRLVR*PSMYPCLLSCV
Trigger: CACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGAGAGGCACCACCATTTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR TCA 72 bp CATCATGGCTCTGACAGGAGGATCCTGCATGGAGTCTaGGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: HHGSDRRILHGV*GQPEFLETWSE
Trigger: TTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCATGCAGGATCCTCCTGTCAGAGCCATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR TCA 72 bp AGGTCATCAGGCTTGGCAGCAAGCACGCTTTCCTGCTaGGCCAGCTCACCAGCCCGAAACTGTTCTGAAAGA +
Preference number: 3 (lower is better)
Translates to: RSSGLAASTLSC*ASSPARNCSER
Trigger: TCTTTCAGAACAGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTGATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR CCA 72 bp GTAGGGGAGAAAAGGATTGTGGGTTCACTGATCAGTTaGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: VGEKRIVGSLIS*HLRVPPPLPQR
Trigger: CCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTGATCAGTGAACCCACAATCCTTTTCTCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR TCA 72 bp TTCCTGCTGAGCCAGCTCACCAGCCCGAAACTGTTCTaGAAGATCCAGTCTGCTCGTTTTGGGGTTCAGGAT +
Preference number: 3 (lower is better)
Translates to: FLLSQLTSPKLF*KIQSARFGVQD
Trigger: ATCCTGAACCCCAAAACGAGCAGACTGGATCTTTCAGAACAGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CAA 90 bp GCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAAGAAAGCTCTGAAAATGCAGGCCTaGAACTTGGGGTGCCACATA +
Preference number: 3 (lower is better)
Translates to: AEHKAQHCWNTVQLGKKALKMQA*NLGCHI
Trigger: TATGTGGCACCCCAAGTTCAAGGCCTGCATTTTCAG...AGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 72 bp TTGCTTTATGTCATCATGGCTCTGACAGGAGGATCCTaGATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGA +
Preference number: 3 (lower is better)
Translates to: LLYVIMALTGGS*MESEVSLSSSR
Trigger: TCTCGAGGAACTCAGGCTGACCTCAGACTCCATGCAGGATCCTCCTGTCAGAGCCATGATGACATAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR GCA 72 bp CCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTaGAGAACTGTCCAGGGAGGCCATCTGACCCTTTCA +
Preference number: 3 (lower is better)
Translates to: PQRNCSNSSSDT*RTVQGGHLTLS
Trigger: TGAAAGGGTCAGATGGCCTCCCTGGACAGTTCTGCAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CAA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGCAGTTCAACCTGTTTTaGGCTTTTTGGTGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLQFNLF*AFWWWL
Trigger: AAGCCACCACCAAAAAGCCAAAAACAGGTTGAACTG...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR-3UTR CAA 90 bp AGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTAAGAAAAGAATGGGGTaGTATTTCCATGGGCTGACA +
Preference number: 3 (lower is better)
Translates to: SWHLRVPPPLPQRNCSNSKKRMG*YFHGLT
Trigger: TGTCAGCCCATGGAAATACAACCCCATTCTTTTCTT...AGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR CCA 72 bp GTTTTTGAGACACTGTTTGGCTGTGTAGTCCAGTGTTaGAACTGCTGGGATCTGAAGTGTGTACCCCACACC +
Preference number: 3 (lower is better)
Translates to: VFETLFGCVVQC*NCWDLKCVPHT
Trigger: GGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAGCCAAACAGTGTCTCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CCA 72 bp GAGTCAGGGACTGAACCTGATAACGGTTGTGAAACTTaGGTAGGGGAGAAAAGGATTGTGGGTTCACTGATC +
Preference number: 3 (lower is better)
Translates to: ESGTEPDNGCET*VGEKRIVGSLI
Trigger: GATCAGTGAACCCACAATCCTTTTCTCCCCTACCCAAGTTTCACAACCGTTATCAGGTTCAGTCCCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR-3UTR CAA 90 bp AGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTGCCTAAAACCCTGACCTaGCATTTGGCTATTAAGACT +
Preference number: 3 (lower is better)
Translates to: SASSLASEELQQLFFRYLPKTLT*HLAIKT
Trigger: AGTCTTAATAGCCAAATGCAAGGTCAGGGTTTTAGG...CAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
3UTR GCA 72 bp AACCCTGAACTCAGAATCTTCTTGTCGCAACCACCATaGCTGGCCCTTATTATCCTTTTTGGTTCTGTAAGG +
Preference number: 3 (lower is better)
Translates to: NPELRIFLSQPP*LALIILFGSVR
Trigger: CCTTACAGAACCAAAAAGGATAATAAGGGCCAGGCATGGTGGTTGCGACAAGAAGATTCTGAGTTCAGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp GCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTGGAGCGCCTGCACCTaGTGCTCCCGCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ALVSRVGCCPAPLPSLPCWSACT*CSRRPA
Trigger: GGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCA...ACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTCCACCTCGGGCTCCCTaGCCAAGCCCGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: APLPSLPCWPHRPDAGQSPPRAP*PSPEAV
Trigger: CACAGCCTCCGGGCTTGGCCAGGGAGCCCGAGGTGG...ACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACACACTGCAGGGCCTCCTaGATCAGCTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEWAAALLPSQAYPVGPTHCRAS*ISCCSS
Trigger: GCTGCTGCAGCAGCTGATCCAGGAGGCCCTGCAGTG...TGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTATCTGCCGCACCTTGTaGCGGACCAGCTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: ALVSRVGCCPAPLPSLPCICRTL*RTSSNR
Trigger: CCGGTTGGAGCTGGTCCGGCACAAGGTGCGGCAGAT...ACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTGGATGCTTGCTCCTCGCTCTCGGTGGGCTaGCCGCAGCTGCCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AYPVGPTGQMQARVDACSSLSVG*PQLPQL
Trigger: CAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGA...GGAGCAAGCATCCACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTGCACAGACAGCCTGGTCTCCAGTCGAGCAAAGGTCTGGAATCCCGGGGACGGGCGGCAGCAGGGGTaGCGGGAAGTGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LCTDSLVSSRAKVWNPGDGRQQG*REVQVG
Trigger: GCCCACCTGCACTTCCCGCCACCCCTGCTGCCGCCC...GTCCCCGGGATTCCAGACCTTTGCTCGACTGGAGACCAGGCTGTCTGTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCAGCCTCGGCTCCTGCTaGCTCCTGCAGCCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPSLGSC*LLQPPK
Trigger: CTTCGGAGGCTGCAGGAGGCAGCAGGAGCCGAGGCT...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTCACAGAGGACCTGGGTaGAGACTTGGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ALVSRVGCCPAPLPSLPCHRGPG*RLGRIL
Trigger: GAGGATCCTGCCAAGTCTGCACCCAGGTCCTCTGTG...ACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACACGCAGCTGCCGCAGTTaGTTCATGGGAAATGGGTTC +
Preference number: 4 (lower is better)
Translates to: AEWAAALLPSQAYPVGPTRSCRS*FMGNGF
Trigger: GAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCG...TGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGAAAGGCGGGCGGCAGCAGGGGTaGCGGGAAGTGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLPPMAELYLPASKGEKGGRQQG*REVQVG
Trigger: GCCCACCTGCACTTCCCGCCACCCCTGCTGCCGCCC...GCCTTTCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTAGGGCACAGAGGACCTaGGTGCAGACTTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ALVSRVGCCPAPLPSLPCRAQRT*VQTWQD
Trigger: ATCCTGCCAAGTCTGCACCCAGGTCCTCTGTGCCCT...ACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCAGGTCCAGCTCGATCTaGCGAGCCGCAGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPRSSSI*RAAGCS
Trigger: TGAGCATCCTGCGGCTCGTCAGATCGAGCTGGACCT...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCAGGGGTGGCGGGAAGTaGAGGTGGGCTGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPRGGGK*RWAVVE
Trigger: TTCCACAACAGCCCACCTGCACTTCCCGCCACCCCT...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CAGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCCCACCTCGGGCTCCCTaGCCAAGCCCGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLAPQSASSLASEELQQLPPRAP*PSPEAV
Trigger: CACAGCCTCCGGGCTTGGCCAGGGAGCCCGAGGTGG...GAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCGTCGGGCAGGTGAAGTaGTTGTTGGTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPVGQVK*LLVGKV
Trigger: GACCTTCCCCACCAACAAGCACTTCACCTGCCCGAC...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAAGTCAAAGACCGCACTaGAGAGATCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AEWAAALLPSQAYPVGPTSQRPH*RDRCCP
Trigger: TGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACT...TGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTCTCTCCACAGCCTCGTaGGCCAGCAGGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EERWGLWLGGGVVERALFLSTAS*ASRWWE
Trigger: CTCCCACCACCTGCTGGCCCACGAGGCTGTGGAGAG...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTGATGTTCTGAAGGGCTaGGGGCACGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EERWGLWLGGGVVERALFDVLKG*GHGRDR
Trigger: CCTGTCCCTGCCGTGCCCTCAGCCCTTCAGAACATC...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp GCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTCACCAGCTCCTTCTGTaGCTTGAGCTCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: APLPSLPCWPHRPDAGQSHQLLL*LELFGE
Trigger: CTCACCAAAGAGCTCAAGTCACAGAAGGAGCTGGTG...ACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCAGCTGCACGTGCTGCTaGAGCGCCTGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSSCTCC*SACTCC
Trigger: GCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCT...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGAAAGGCTCCGAGAGGAGGTCCTaGAGCACCCGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: HLPPMAELYLPASKGEKGSERRS*STRWST
Trigger: GGTGGACCAGCGGGTGCTCCAGGACCTCCTCTCGGA...GCCTTTCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCATGAGCAGCTGCACGTaGTGCTGGAGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSMSSCT*CWSACT
Trigger: GGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCAT...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp AATGAGACGGCTTCTGTCCTAAAGGTGGAGCGCCATCAACTGCAAGGATGTTGCCCGGGAGCCTGCAGGTaGCTGACACGGCGGTGGACC +
Preference number: 4 (lower is better)
Translates to: NETASVLKVERHQLQGCCPGACR*LTRRWT
Trigger: GGTCCACCGCCGTGTCAGGCACCTGCAGGCTCCCGG...GCAACATCCTTGCAGTTGATGGCGCTCCACCTTTAGGACAGAAGCCGTCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCCAGGGTCACACACACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAGCTTGGGTTTCTGCGTaGGACCTGAGGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SRVTHTSRPWLNSIFLPAAWVSA*DLRAQR
Trigger: CCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGC...TGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTGTGTGTGACCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp CAGGCTTGGCAGCAAGCACGCTTTCCTGCTGAGCCAGCTCACCAGCCCGAAACTTTTAGGGAGATGTTCTaGAGGGCTGAGGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: QAWQQARFPAEPAHQPETFREMF*RAEGTA
Trigger: TGCCGTGCCCTCAGCCCTTCAGAACATCTCCCTAAA...AGTTTCGGGCTGGTGAGCTGGCTCAGCAGGAAAGCGTGCTTGCTGCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp CAGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCAGGGGTGGCGGGAAGTaGAGGTGGGCTGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QLAPQSASSLASEELQQLRGGGK*RWAVVE
Trigger: TTCCACAACAGCCCACCTGCACTTCCCGCCACCCCT...GAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CCA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCCTGCCAGGTAGGCACTaGAGGCTCGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSLPGRH*RLASPA
Trigger: AGCAGGAGAAGCGAGCCTCCAGTGCCTACCTGGCAG...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTATCGTGGGCCAGCAGGTaGTGGGAGCGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLSWASR*WERTSK
Trigger: CTTGGAGGTGCGCTCCCACCACCTGCTGGCCCACGA...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp TCAGAGACTGGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGTGGGTGGATCTCAGAGTTaGGGAAGCGGTTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SETGQVTQHVSLPPVLCVGGSQS*GSGSGS
Trigger: GGACCCAGAACCGCTTCCTCAACTCTGAGATCCACC...CACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCTGGGGAAGGTCCGGTTaGGGTCCAGCTCGATCTGAC +
Preference number: 4 (lower is better)
Translates to: PFLFLELTLWVCPQAVTAWGRSG*GPARSD
Trigger: GTCAGATCGAGCTGGACCTCAACCGGACCTTCCCCA...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp TGGGGGAGTAGTAGAAAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAGCTGTCCAAGGGGTTTaGATCCTGCGCGGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: WGSSRKGTVYPAACAHSSAVQGV*ILRGAR
Trigger: TCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGC...TGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTTTCTACTACTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTATCTCCGGCTTCCCACTaGAGGGCCTCCTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLSPASH*RASWIS
Trigger: GCTGATCCAGGAGGCCCTGCAGTGGGAAGCCGGAGA...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGAAAGGCGTAGCCAGTAGAGCATaGCCTGCTTGGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HLPPMAELYLPASKGEKGVASRA*PAWWQP
Trigger: AGGCTGCCACCAAGCAGGCCATGCTCTACTGGCTAC...GCCTTTCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTCCGTGGGCTGCCGCTTaGGCCTGCTTGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLPWAAA*ACLLPR
Trigger: CCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGG...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCCAGGGTCACACACACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAACCTGGGTGCAGACTTaGCAGGATCCTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRVTHTSRPWLNSIFLPATWVQT*QDPLAL
Trigger: AAGAGCCAGAGGATCCTGCCAAGTCTGCACCCAGGT...TGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTGTGTGTGACCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAAGAAAGCTGGTCTCTGTCCTCGGTaGCTGCCAGGTAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AEHKAQHCWNTVQLGKKAGLCPR*LPGRHW
Trigger: CCAGTGCCTACCTGGCAGCCACCGAGGACAGAGACC...AGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGTCCTGGAGCACCCGCTaGTCCACCTGGGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLSWSTR*STWDAV
Trigger: GACTGCATCCCAGGTGGACCAGCGGGTGCTCCAGGA...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp GGGAATCTGTTCTTGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATGATGTTCTGAAGGGCTaGGGGCACGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GNLFLPPLSVSQGSNSGHDVLKG*GHGRDR
Trigger: CCTGTCCCTGCCGTGCCCTCAGCCCTTCAGAACATC...ATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR TCA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCTGGAGGTCGGGCAGGTaGAGTGCTTGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSWRSGR*SACWWG
Trigger: TCCCCACCAACAAGCACTTCACCTGCCCGACCTCCA...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GGGAATCTGTTCTTGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATGCTGTCCAAGGGGTTTaGATCCTGCGCGGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: GNLFLPPLSVSQGSNSGHAVQGV*ILRGAR
Trigger: TCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGC...ATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp GGGGCTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGTGCTCCATCCTCTCCTaGTGGCTCAGGAAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: GATVWKDRCPENAGLELGCSILS*WLRKSP
Trigger: CGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCA...CCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCGGCGGGAAGTGCAGGTaGGCTGTTGTGGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSGGKCR*AVVELP
Trigger: TGGGAGTTCCACAACAGCCCACCTGCACTTCCCGCC...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCTCCTCCGTGAGCTTCTaGGTGAGCTTGCAGATGACC +
Preference number: 4 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSSSVSF*VSLQMT
Trigger: GGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGA...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCGGCAGTAGCCAATGGTaGGGTTCTGCCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PFLFLELTLWVCPQAVTAGSSQW*GSARRR
Trigger: CCTTCTCCTGGCAGAACCCCACCATTGGCTACTGCC...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GTGGGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTGGACCAACAGGGCGATaGCCGCCAGCCTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VGCKQKASFRHEAVEIVPGPTGR*PPACSG
Trigger: GCCTGAACAGGCTGGCGGCCATCGCCCTGTTGGTCC...AGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCAGAGACTGGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGTGGTATGGTCTCCACAATaGCCACCAGGCACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SETGQVTQHVSLPPVLCVVWSPQ*PPGTRR
Trigger: CCTTCTGGTGCCTGGTGGCCATTGTGGAGACCATAC...CACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCAGAGACTGGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGTGACTCAGCCGGCAGTATaGTCTCCACAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SETGQVTQHVSLPPVLCVTQPAV*SPQWPP
Trigger: TGGTGGCCATTGTGGAGACCATACTGCCGGCTGAGT...CACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTAGGCATTTCCAGCCCTTaGTGGGTCCTTTGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLGISSP*WVLCRQ
Trigger: TTGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCC...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCAGCTCGGCCTCCTCTTaGTCTAGTTTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PFLFLELTLWVCPQAVTASSASS*SSLRCR
Trigger: CCTGCACCTCAAACTAGAGCAAGAGGAGGCCGAGCT...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp CCAAGAGTAGCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTCTTGGGCCTGCTTGTTaGCACGGATGTTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: PRVAEHKAQHCWNTVQLGLGPAC*HGCCAW
Trigger: CCATGCACAACATCCGTGGCAACAAGCAGGCCCAAG...ACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGCTACTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GTGGGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTCCTTCTCCTGGGCTGTaGGGCTCCGAGCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VGCKQKASFRHEAVEIVPPSPGL*GSEPVH
Trigger: ATGGACTGGCTCGGAGCCGCACAGCCCAGGAGAAGG...AGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACTTATCCATGAGCAGCTaGACGTGCTGCTGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHLSMSS*TCCWSA
Trigger: GGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAA...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GAGGAGAGGTGGGGGCTGTGGCTTGGTGGGGGAGTAGTAGAAAGGGCACTGTTTATGTCATCCTTCAGATaGTCCATCCTCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EERWGLWLGGGVVERALFMSSFR*SILSCW
Trigger: CCAGCAGGAGAGGATGGAGCATCTGAAGGATGACAT...AAACAGTGCCCTTTCTACTACTCCCCCACCAAGCCACAGCCCCCACCTCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GGTCCCCCAAGGAGAAGCGCAAGTGCTTGGCAGAGTTCTCCTCTAGGGAGAGTTCTTTTTCTGGAAGGCTaGGGTCAGAGATCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPPRRSASAWQSSPLGRVLFLEG*GQRSRA
Trigger: AGCCCTCGATCTCTGACCCCAGCCTTCCAGAAAAAG...AACTCTCCCTAGAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GGGGCTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGTCCATCCTCTCCTGCTaGCTCAGGAAGTCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GATVWKDRCPENAGLELGSILSC*LRKSPL
Trigger: CAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGA...CCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCGCAGGTAGGCGCACTTaGTCAGCAGGGCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSAGRRT*SAGLSP
Trigger: AGGAGAAAGCCCTGCTGACCAAGTGCGCCTACCTGC...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACCTACCTGGCAGTTCCTaGCTTGCAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHLPGSS*LAGRRT
Trigger: AGTGCGCCTACCTGCAAGCCAGGAACTGCCAGGTAG...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCCAGGGTCACACACACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCATACTTGCTTTCTACCTaGCAGTTCCTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRVTHTSRPWLNSIFLPAYLLST*QFLACR
Trigger: CCTGCAAGCCAGGAACTGCCAGGTAGAAAGCAAGTA...TGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTGTGTGTGACCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCCTTGGCAGTAGCCAATaGTGGGGTTCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PFLFLELTLWVCPQAVTALGSSQ*WGSARR
Trigger: TCTCCTGGCAGAACCCCACCATTGGCTACTGCCAAG...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 72 bp AACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTaGGTAAGAAAGCTGCGTTGGTCCCCCAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTRPSTAGTQCS*VRKLRWSPKEK
Trigger: CTTCTCCTTGGGGGACCAACGCAGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 72 bp GGTAGGGGAGAAAAGGATTGTGGGTTCACTGATCAGTaGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRGEKDCGFTDQ*APQSASSLASE
Trigger: CTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACTGATCAGTGAACCCACAATCCTTTTCTCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR TCA 90 bp AGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTGGGCATTTCCAGCCCTTaGTGGGTCCTTTGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SASSLASEELQQLFFRYLGISSP*WVLCRQ
Trigger: TTGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCC...CAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR TCA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGCCCGGCTGGGAGTCTTaGTTTCAAAAGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLPGWES*FQKCPP
Trigger: AGGAGGGCACTTTTGAAATCAAGACTCCCAGCCGGG...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp AATGAGACGGCTTCTGTCCTAAAGGTGGAGCGCCATCAACTGCAAGGATGTTGCCCTCTTGCTCTAGTTTaGGGTGCAGGGTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: NETASVLKVERHQLQGCCPLALV*GAGWAH
Trigger: ATGGGCCCACCCTGCACCTCAAACTAGAGCAAGAGG...GCAACATCCTTGCAGTTGATGGCGCTCCACCTTTAGGACAGAAGCCGTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCTTTAGGGAGATGTTCTaGAGGGCTGAGGGCACGGCA +
Preference number: 4 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSFREMF*RAEGTA
Trigger: TGCCGTGCCCTCAGCCCTTCAGAACATCTCCCTAAA...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTGCTGCCGCTTGGGCCTaGTTGTTGCCACGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLAAAWA*LLPRML
Trigger: CAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGC...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GGGGCTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGTCCTGGATCAGCTGCTaGAGCAGCTCAGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GATVWKDRCPENAGLELGSWISC*SSSGKS
Trigger: TGACTTCCCTGAGCTGCTGCAGCAGCTGATCCAGGA...CCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACCTGCAGAACTGTCCAGGGAGGCGGGAAGTGCAGGTaGGCTGTTGTGGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: PQRNCSNSSSDTCRTVQGGGKCR*AVVELP
Trigger: TGGGAGTTCCACAACAGCCCACCTGCACTTCCCGCC...TCCCTGGACAGTTCTGCAGGTATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACCACCCACGAGTCCAGTaGGTGTTTTCACAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHHPRVQ*VFSQGT
Trigger: TGTGCCCTGTGAAAACACCCACTGGACTCGTGGGTG...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp TGGGGGAGTAGTAGAAAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCATCCTCCAGATCTTGGTaGCCTGGTGGATCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: WGSSRKGTVYPAACAHSSSSRSW*PGGSQS
Trigger: ACTCTGAGATCCACCAGGTCACCAAGATCTGGAGGA...TGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTTTCTACTACTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTATGCTCTAGTTTGAGGTaGAGGGTGGGCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLCSSLR*RVGPFS
Trigger: TGAGAATGGGCCCACCCTGCACCTCAAACTAGAGCA...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp GGGAATCTGTTCTTGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATAGCTCGGCCTCCTCTTaGTCTAGTTTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GNLFLPPLSVSQGSNSGHSSASS*SSLRCR
Trigger: CCTGCACCTCAAACTAGAGCAAGAGGAGGCCGAGCT...ATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGTGCCGCTTGGGTTTCTaGGTGGGACCTGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMCRLGF*VGPEGT
Trigger: TGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCA...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTGCCCGGCCAGGTACTTaGTTTCTACCTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLARPGT*FLPGSS
Trigger: GGAACTGCCAGGTAGAAAGCAAGTACCTGGCCGGGC...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp AGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTAGTCAAAGACCGCACTaGAGAGATCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SWHLRVPPPLPQRNCSNSSQRPH*RDRCCP
Trigger: TGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACT...AGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CCA 90 bp AATTGCAGCAACTCTTCTTCAGATACCTGCAGAACTGTCCAGGGAGGCCATCTGGCAGGTGGGCTGTTGTaGAACTCCCAGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: NCSNSSSDTCRTVQGGHLAGGLL*NSQRFI
Trigger: GATGAAGCGCTGGGAGTTCCACAACAGCCCACCTGC...CAGATGGCCTCCCTGGACAGTTCTGCAGGTATCTGAAGAAGAGTTGCTGCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CCA 90 bp GGTCCCCCAAGGAGAAGCGCAAGTGCTTGGCAGAGTTCTCCTCTAGGGAGAGTTATCTTGGTGACCTGGTaGATCTCAGAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPPRRSASAWQSSPLGRVILVTW*ISELRK
Trigger: CTTCCTCAACTCTGAGATCCACCAGGTCACCAAGAT...AACTCTCCCTAGAGGAGAACTCTGCCAAGCACTTGCGCTTCTCCTTGGGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCAGAGACTGGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGTGCCAAGGCCTGGATCTTaGCTAGCAGTTTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SETGQVTQHVSLPPVLCVPRPGS*LAVLGL
Trigger: AAGACCTAAAACTGCTAGCCAAGATCCAGGCCTTGG...CACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACCGCACCTCCAAGGCCTaGATCTTGGCTAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHRTSKA*ILASSF
Trigger: AAAACTGCTAGCCAAGATCCAGGCCTTGGAGGTGCG...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 72 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTaGAACTTGGGGTGCCACATAATGGTGACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQA*NLGCHIMVTKA
Trigger: GGCCTTGGTCACCATTATGTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR TCA 90 bp AATTGCAGCAACTCTTCTTCAGATACCTGCAGAACTGTCCAGGGAGGCCATCTGCCCGGCTGGGAGTCTTaGTTTCAAAAGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NCSNSSSDTCRTVQGGHLPGWES*FQKCPP
Trigger: AGGAGGGCACTTTTGAAATCAAGACTCCCAGCCGGG...CAGATGGCCTCCCTGGACAGTTCTGCAGGTATCTGAAGAAGAGTTGCTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp TCAGAGACTGGTCAGGTGACCCAGCATGTATCCCTGCCTCCTGTCCTGTGTGTGTTGCAGATGACCTGTTaGTTGGCATGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: SETGQVTQHVSLPPVLCVLQMTC*LAWFLS
Trigger: GGATAAGAACCATGCCAAGCAACAGGTCATCTGCAA...CACACACAGGACAGGAGGCAGGGATACATGCTGGGTCACCTGACCAGTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp CCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATCAGGCTTGGCAGCAACAGCCTGTATTTCAGTaGCCAGATGCTTTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPLSVSQGSNSGHQAWQQQPVFQ*PDALGR
Trigger: TCTCCCTAAAGCATCTGGGCACTGAAATACAGGCTG...TTGCTGCCAAGCCTGATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp AGCTCACCAGCCCGAAACTGTTCTGAAAGATCCAGTCTGCTCGTTTTGGGGTTCCGTCTCCTGGACTCCTaGTCCTGTCGAAGTTACTAC +
Preference number: 4 (lower is better)
Translates to: SSPARNCSERSSLLVLGFRLLDS*SCRSYY
Trigger: GTAGTAACTTCGACAGGAGCAGGAGTCCAGGAGACG...GAACCCCAAAACGAGCAGACTGGATCTTTCAGAACAGTTTCGGGCTGGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CCA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGGCAGGTGGGCTGTTGTaGAACTCCCAGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMAGGLL*NSQRFI
Trigger: GATGAAGCGCTGGGAGTTCCACAACAGCCCACCTGC...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp TCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTTCTTCAGATACACCCACGAGTCCAGTaGGTGTTTTCACAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SECLLPCLRGIAATLLQIHPRVQ*VFSQGT
Trigger: TGTGCCCTGTGAAAACACCCACTGGACTCGTGGGTG...TATCTGAAGAAGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGGGGAAGGTGTTGCTTTaGCGCTTGGGTTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMGKVLL*RLGFCV
Trigger: CACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCC...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGGTTCTGGGTCCGATATaGTTCCATGTCATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLVLGPI*FHVILQ
Trigger: CTGAAGGATGACATGGAAGCATATCGGACCCAGAAC...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CACCTCCCGCCCATGGCTGAACTCTATCTTCCTGCCAGCAAAGGTGAGAAAGGCCACGGATGTTGTGCATaGTGTTTTGTATTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLPPMAELYLPASKGEKGHGCCA*CFVFQC
Trigger: GCACTGAAATACAAAACACCATGCACAACATCCGTG...GCCTTTCTCACCTTTGCTGGCAGGAAGATAGAGTTCAGCCATGGGCGGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGTCCATCGGAAAAGAATaGGAAGGTGTTGCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLSIGKE*EGVALP
Trigger: CGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGA...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGATCTCCAGGCTGTCCTaGAGTTGCAGGATCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMISRLS*SCRIAS
Trigger: GGAAGCGATCCTGCAACTCCAGGACAGCCTGGAGAT...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACGCCGCAGTTGCTTCATaGGAAATGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHAAVAS*EMGSCH
Trigger: ATGACATGAACCCATTTCCCATGAAGCAACTGCGGC...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR GCA 90 bp AATGAGACGGCTTCTGTCCTAAAGGTGGAGCGCCATCAACTGCAAGGATGTTGCAGAATGGGAAGGTGTTaGTTTGCCGCTTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NETASVLKVERHQLQGCCRMGRC*FAAWVS
Trigger: AGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCT...GCAACATCCTTGCAGTTGATGGCGCTCCACCTTTAGGACAGAAGCCGTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 72 bp TGTCCTAAAGGTGGAGCGCCATCAACTGCAAGGATGTaGCTTTATGTCATCATGGCTCTGACAGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: CPKGGAPSTARM*LYVIMALTGGS
Trigger: GGATCCTCCTGTCAGAGCCATGATGACATAAAGCAACATCCTTGCAGTTGATGGCGCTCCACCTTTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGTTCCATCTCGTAGTCTaGCACCGTCAGGAAGCCATA +
Preference number: 4 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMFHLVV*HRQEAI
Trigger: TATGGCTTCCTGACGGTGCCAGACTACGAGATGGAA...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CCA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGTTGCTTCATGGGAAATaGGTTCATGTCATTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLLLHGK*VHVIEG
Trigger: GCCTTCAATGACATGAACCCATTTCCCATGAAGCAA...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
3UTR CAA 72 bp TATGCCAGGTCAGAGAACACTTTTGGGAATCTGTTCTaGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCA +
Preference number: 4 (lower is better)
Translates to: YARSENTFGNLF*PPLSVSQGSNS
Trigger: TGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCCAAAAGTGTTCTCTGACCTGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR GCA 90 bp CTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGGTGCCACTTGCCACGGATGTTGTaGATGGTGTTTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: LSGKTDALKMQALNLGCHLPRML*MVFCIS
Trigger: TGAAATACAAAACACCATGCACAACATCCGTGGCAA...GTGGCACCCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TGCTGCTGGAGCGCCTGCACCTGCTGCTCCCGCAGGCCGGCCTCATaGGCCAGGCGCTCGCGGCCCTGCTCCAGAGCCTCCACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CCWSACTCCSRRPAS*ARRSRPCSRASTLW
Trigger: CCAGAGGGTGGAGGCTCTGGAGCAGGGCCGCGAGCGCCTGGCGCATGAGGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCAGCAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TTCTTATCCATGAGCAGCTGCACGTGCTGCTGGAGCGCCTGCACCTaGTGCTCCCGCAGGCCGGCCTCATGCGCCAGGCGCTCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: FLSMSSCTCCWSACT*CSRRPASCARRSRP
Trigger: GGGCCGCGAGCGCCTGGCGCATGAGGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 90 bp CCCGGGCTAGAAGCTCTTGGTAGCAGCCGGGAGCCTGCAGGTGCCTaGCACGGCGGTGGACCAGCCACCTCCAGACTCGGGGACGGTGCT +
Preference number: 5 (lower is better)
Translates to: PGLEALGSSREPAGA*HGGGPATSRLGDGA
Trigger: AGCACCGTCCCCGAGTCTGGAGGTGGCTGGTCCACCGCCGTGTCAGGCACCTGCAGGCTCCCGGCTGCTACCAAGAGCTTCTAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp AGCCCCACGCTGTCCGCCTCTCCGGCTTCCCACTGCAGGGCCTCCTaGATCAGCTGCTGCAGCAGCTCAGGGAAGTCACCAGCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SPTLSASPASHCRAS*ISCCSSSGKSPASA
Trigger: AGCCGAGGCTGGTGACTTCCCTGAGCTGCTGCAGCAGCTGATCCAGGAGGCCCTGCAGTGGGAAGCCGGAGAGGCGGACAGCGTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CACCTTGTGCCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTGGCTaGCAGGTAGGCACTGGAGGCTCGCTTCTCCTGCTGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HLVPDQLQPVSVLGG*QVGTGGSLLLLGSL
Trigger: GAGGCTGCCCAGCAGGAGAAGCGAGCCTCCAGTGCCTACCTGGCAGCCACCGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp AGAGCCTCCACCCTCTGGTTCAGCTCAGCGATCTGCCGCACCTTGTaGCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTGGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: RASTLWFSSAICRTL*RTSSNRSLSSVAAR
Trigger: CCTGGCAGCCACCGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACAAGGTGCGGCAGATCGCTGAGCTGAACCAGAGGGTGGAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTGCCGCTTGGGCCTGCTaGTTGCCACGGATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: APLPSLPCWPHRPDAGQSAAWAC*LPRMLC
Trigger: GCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGC...ACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 90 bp TCTCGTAGTCTGGCACCGTCAGGAAGCCATAGTCGTCGTACTCGCTaGCGGGGCTCAGCCCCACGCTGTCCGCCTCTCCGGCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: SRSLAPSGSHSRRTR*RGSAPRCPPLRLPT
Trigger: AGTGGGAAGCCGGAGAGGCGGACAGCGTGGGGCTGAGCCCCGTCAGCGAGTACGACGACTATGGCTTCCTGACGGTGCCAGACTACGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TGCAGCAGCTCAGGGAAGTCACCAGCCTCGGCTCCTGCTGCCTCCTaGAGCCTCCGAAGCCCGGCCAGGTACTTGCTTTCTACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CSSSGKSPASAPAAS*SLRSPARYLLSTWQ
Trigger: CTGCCAGGTAGAAAGCAAGTACCTGGCCGGGCTTCGGAGGCTGCAGGAGGCAGCAGGAGCCGAGGCTGGTGACTTCCCTGAGCTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp CGGCAGGGACAGGCTGTAAGGCAGCTGCCGCACCCACGAGTCCAGTaGGTGTTTTCACAGGGCACAGGAACTCCTCCAGCTCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RQGQAVRQLPHPRVQ*VFSQGTGTPPARPP
Trigger: AGGAGGCCGAGCTGGAGGAGTTCCTGTGCCCTGTGAAAACACCCACTGGACTCGTGGGTGCGGCAGCTGCCTTACAGCCTGTCCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 90 bp TTCCCCGCTTTGAGGCTCTCCACCCTGAGGCGAGTCTTCCACGAGTaGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTTGCCACGGATGTT +
Preference number: 5 (lower is better)
Translates to: FPALRLSTLRRVFHE*PVGCRLGLLVATDV
Trigger: AACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCTCAGGGTGGAGAGCCTCAAAGCGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp TGTTGCTTGGCATGGTTCTTATCCATGAGCAGCTGCACGTGCTGCTaGAGCGCCTGCACCTGCTGCTCCCGCAGGCCGGCCTCATGCGCC +
Preference number: 5 (lower is better)
Translates to: CCLAWFLSMSSCTCC*SACTCCSRRPASCA
Trigger: GGCGCATGAGGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp TTCAGCAGCTCTAGCTCGCGCAGCTCCGCCTCCAGTCGCTCTCGGTaGGCTGCCCGCAGCTGCCGCAGTTGCTTCATGGGAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: FSSSSSRSSASSRSR*AARSCRSCFMGNGF
Trigger: GAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGAGCTGCGCGAGCTAGAGCTGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 90 bp AAGTGCTTGTTGGTGGGGAAGGTCCGGTTGAGGTCCAGCTCGATCTaGCGAGCCGCAGGATGCTCACATGCCCGGCCCCGGGCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: KCLLVGKVRLRSSSI*RAAGCSHARPRARS
Trigger: GCTTCTAGCCCGGGGCCGGGCATGTGAGCATCCTGCGGCTCGTCAGATCGAGCTGGACCTCAACCGGACCTTCCCCACCAACAAGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp AGGCTCTCCACCCTGAGGCGAGTCTTCCACGAGTGGCCCGTGGGCTaGCGCTTGGGCCTGCTTGTTGCCACGGATGTTGTGCATGGTGTT +
Preference number: 5 (lower is better)
Translates to: RLSTLRRVFHEWPVG*RLGLLVATDVVHGV
Trigger: AACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCTCAGGGTGGAGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp GCTGTCGCCTTCTCCTTCGTCCTCGCTGACGCAGCCCTCTGGCGGTaGTCTGCCCAGGGATGCCCGTCTCTGCAAGTACTCCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: AVAFSFVLADAALWR*SAQGCPSLQVLHFQ
Trigger: CTGAAAGTGGAGTACTTGCAGAGACGGGCATCCCTGGGCAGAGCACCGCCAGAGGGCTGCGTCAGCGAGGACGAAGGAGAAGGCGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCAGTGCAGGTGGGCTGTaGTGGAACTCCCAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPSAGGL*WNSQRF
Trigger: GAAGCGCTGGGAGTTCCACAACAGCCCACCTGCACT...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTAGCCCGGCCAGGTACTaGCTTTCTACCTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: APLPSLPCWPHRPDAGQSSPARY*LSTWQF
Trigger: GAACTGCCAGGTAGAAAGCAAGTACCTGGCCGGGCT...ACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp ATGACCTGTTGCTTGGCATGGTTCTTATCCATGAGCAGCTGCACGTaGTGCTGGAGCGCCTGCACCTGCTGCTCCCGCAGGCCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: MTCCLAWFLSMSSCT*CWSACTCCSRRPAS
Trigger: TGAGGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TCGCGCAGCTCCGCCTCCAGTCGCTCTCGGTGGGCTGCCCGCAGCTaGCGCAGTTGCTTCATGGGAAATGGGTTCATGTCATTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SRSSASSRSRWAARS*RSCFMGNGFMSLKA
Trigger: AGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGAGCTGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TTGCAGATGACCTGTTGCTTGGCATGGTTCTTATCCATGAGCAGCTaGACGTGCTGCTGGAGCGCCTGCACCTGCTGCTCCCGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LQMTCCLAWFLSMSS*TCCWSACTCCSRRP
Trigger: CGGCCTGCGGGAGCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp TTGGTGAGCATCAGCACCTGCTGCTCCAAGGCCGCCACCTTCTCCTaGGCTGTGCGGCTCCGAGCCAGTCCATCGGAAAAGAATGGGAAG +
Preference number: 5 (lower is better)
Translates to: LVSISTCCSKAATFS*AVRLRASPSEKNGK
Trigger: CTTCCCATTCTTTTCCGATGGACTGGCTCGGAGCCGCACAGCCCAGGAGAAGGTGGCGGCCTTGGAGCAGCAGGTGCTGATGCTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCTGCTGTCCAAGGGGTTaGCATCCTGCGCGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSCCPRG*HPARCA
Trigger: CGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCA...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAAGAAAGCTCCCGTGGGCTGCCGCTaGGGCCTGCTTGTTGCCACG +
Preference number: 5 (lower is better)
Translates to: AEHKAQHCWNTVQLGKKAPVGCR*GLLVAT
Trigger: CGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGG...AGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGCTCCTTCTGTGACTaGAGCTCTTTGGTGAGCATC +
Preference number: 5 (lower is better)
Translates to: PAPLPSLPCWPHRPDAGQSSFCD*SSLVSI
Trigger: GATGCTCACCAAAGAGCTCAAGTCACAGAAGGAGCT...CTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GCCGAGTGGGCTGCTGCCCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACACTTGCAGATGACCTGTaGCTTGGCATGGTTCTTATC +
Preference number: 5 (lower is better)
Translates to: AEWAAALLPSQAYPVGPTLADDL*LGMVLI
Trigger: GATAAGAACCATGCCAAGCAACAGGTCATCTGCAAG...TGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGGGCAGCAGCCCACTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCTGGTGGATCTCAGAGTaGAGGAAGCGGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPWWISE*RKRFWV
Trigger: GACCCAGAACCGCTTCCTCAACTCTGAGATCCACCA...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 90 bp GAATGGGAAGGTGTTGCTTTGCCGCTTGGGTTTCTGCGTGGGACCTaGGGGCACAGAGGACCTGGGTGCAGACTTGGCAGGATCCTCTGG +
Preference number: 5 (lower is better)
Translates to: EWEGVALPLGFLRGT*GHRGPGCRLGRILW
Trigger: CCAGAGGATCCTGCCAAGTCTGCACCCAGGTCCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CGGCTCCGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTTGCTTTaGCGCTTGGGTTTCTGCGTGGGACCTGAGGGCACAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: RLRASPSEKNGKVLL*RLGFCVGPEGTEDL
Trigger: CAGGTCCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CTGTGCGGCTCCGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTTaGTTTGCCGCTTGGGTTTCTGCGTGGGACCTGAGGGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: LCGSEPVHRKRMGRC*FAAWVSAWDLRAQR
Trigger: CCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGAGCCGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp GTCCGATATGCTTCCATGTCATCCTTCAGATGCTCCATCCTCTCCTaGTGGCTCAGGAAGTCGCCGTTGGTAGCGTCGGCGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VRYASMSSFRCSILS*WLRKSPLVASAGWA
Trigger: TGCCCAGCCCGCCGACGCTACCAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCATCTGAAGGATGACATGGAAGCATATCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CTTCTCCGAGAGGAGGTCCTGGAGCACCCGCTGGTCCACCTGGGATaGAGTCAGTGTCTTGCTGTAGTACTCAGCCGGCAGTATGGTCTC +
Preference number: 5 (lower is better)
Translates to: LLREEVLEHPLVHLG*SQCLAVVLSRQYGL
Trigger: GAGACCATACTGCCGGCTGAGTACTACAGCAAGACACTGACTGCATCCCAGGTGGACCAGCGGGTGCTCCAGGACCTCCTCTCGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp AAGTGCCCTCCTCCTCAGCGTCCGCCTTACAGTCAAAGACCGCACTaGAGAGATCGATGCTGTCCAAGGGGTTTGCATCCTGCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: KCPPPQRPPYSQRPH*RDRCCPRGLHPARC
Trigger: GCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACTGTAAGGCGGACGCTGAGGAGGAGGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 90 bp CCGTTGGTAGCGTCGGCGGGCTGGGCAAGGTCCTCCGTGAGCTTCTaGGTGAGCTTGCAGATGACCTGTTGCTTGGCATGGTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: PLVASAGWARSSVSF*VSLQMTCCLAWFLS
Trigger: GGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGACCTTGCCCAGCCCGCCGACGCTACCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp CGATATGCTTCCATGTCATCCTTCAGATGCTCCATCCTCTCCTGCTaGCTCAGGAAGTCGCCGTTGGTAGCGTCGGCGGGCTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RYASMSSFRCSILSC*LRKSPLVASAGWAR
Trigger: CCTTGCCCAGCCCGCCGACGCTACCAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCATCTGAAGGATGACATGGAAGCATATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp GCCTCCGAAGCCCGGCCAGGTACTTGCTTTCTACCTGGCAGTTCCTaGCTTGCAGGTAGGCGCACTTGGTCAGCAGGGCTTTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: ASEARPGTCFLPGSS*LAGRRTWSAGLSPS
Trigger: AGAAGGAGAAAGCCCTGCTGACCAAGTGCGCCTACCTGCAAGCCAGGAACTGCCAGGTAGAAAGCAAGTACCTGGCCGGGCTTCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AAGGCTGCTTACCAACTGGCTCTGGTGAGCCGAGTGGGCTGCTGCCCTGCTCCCAGCTTCTGGGTGAGCTaGCAGATGACCTGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: KAAYQLALVSRVGCCPAPSFWVS*QMTCCL
Trigger: CAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCT...GGGAGCAGGGCAGCAGCCCACTCGGCTCACCAGAGCCAGTTGGTAAGCAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp TCCGCCTCCAGTCGCTCTCGGTGGGCTGCCCGCAGCTGCCGCAGTTaGTTCATGGGAAATGGGTTCATGTCATTGAAGGCTATGCTCATG +
Preference number: 5 (lower is better)
Translates to: SASSRSRWAARSCRS*FMGNGFMSLKAMLM
Trigger: CATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCGCGATCTGCCGCACCTaGTGCCGGACCAGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSAICRT*CRTSSN
Trigger: GTTGGAGCTGGTCCGGCACAAGGTGCGGCAGATCGC...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTAAGAAAGCTGCCCGAAGCAGCTGCTaGAGCTCAGCTGAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: AEHKAQHCWNTVQLGKKAARSSC*SSAEGV
Trigger: CACGCCCTCAGCTGAGCTCAAGCAGCTGCTTCGGGC...AGCTTTCTTACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCCAGCCTGTTCAGGCCTaGGCAGTAGCCAATGGTGGG +
Preference number: 5 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSQPVQA*AVANGG
Trigger: CCCACCATTGGCTACTGCCAAGGCCTGAACAGGCTG...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp TCCGTGAGCTTCTGGGTGAGCTTGCAGATGACCTGTTGCTTGGCATaGTTCTTATCCATGAGCAGCTGCACGTGCTGCTGGAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: SVSFWVSLQMTCCLA*FLSMSSCTCCWSAC
Trigger: GCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp CTCTCGGTGGGCTGCCCGCAGCTGCCGCAGTTGCTTCATGGGAAATaGGTTCATGTCATTGAAGGCTATGCTCATGAGCTTCCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LSVGCPQLPQLLHGK*VHVIEGYAHELPAV
Trigger: GACAGCCGGAAGCTCATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTCGGCATTTCCAGCCCTaGATGGGTCCTTTGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SWHLRVPPPLPQRNCSNSRHFQP*MGPLPP
Trigger: TGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCCG...AGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CAA 90 bp GCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGAGTGTTGTGCATGGTGTTTaGTATTTCAGTGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: APLPSLPCWPHRPDAGQSVVHGV*YFSAQM
Trigger: CATCTGGGCACTGAAATACAAAACACCATGCACAAC...ACTCTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CCTGCTCCCCTCCCAAGCCTACCCTGTTGGCCCCACAGGCCAGATGCAGGCCAGTTGTTGCCACGGATGTaGTGCATGGTGTTTTGTATT +
Preference number: 5 (lower is better)
Translates to: PAPLPSLPCWPHRPDAGQLLPRM*CMVFCI
Trigger: AATACAAAACACCATGCACAACATCCGTGGCAACAA...CTGGCCTGCATCTGGCCTGTGGGGCCAACAGGGTAGGCTTGGGAGGGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCGCTTGGGCCTGCTTGTaGCCACGGATGTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSAWACL*PRMLCM
Trigger: CATGCACAACATCCGTGGCAACAAGCAGGCCCAAGC...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp TGGATGCTTGCTCCAGGTCCACTGTCCAGTCCACATCAGGTTCCTCAGGGTAGCCAGGTGAAGTGCTTGTaGGTGGGGAAGGTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: WMLAPGPLSSPHQVPQGSQVKCL*VGKVRL
Trigger: CAACCGGACCTTCCCCACCAACAAGCACTTCACCTG...GCTACCCTGAGGAACCTGATGTGGACTGGACAGTGGACCTGGAGCAAGCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCGGGCAGGTGAAGTGCTaGTTGGTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSGQVKC*LVGKVR
Trigger: CCGGACCTTCCCCACCAACAAGCACTTCACCTGCCC...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CCTCAGCGTCCGCCTTACAGTCAAAGACCGCACTGGAGAGATCGATaGTGTCCAAGGGGTTTGCATCCTGCGCGGTGCGCGAATAATACA +
Preference number: 5 (lower is better)
Translates to: PQRPPYSQRPHWRDR*CPRGLHPARCANNT
Trigger: TGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACTGTAAGGCGGACGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS GCA 90 bp AGTCTTCCACGAGTGGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTTaGCACGGATGTTGTGCATGGTGTTTTGTATTTCAGTGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SLPRVARGLPLGPAC*HGCCAWCFVFQCPD
Trigger: ATCTGGGCACTGAAATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp GCAAGGTCCTCCGTGAGCTTCTGGGTGAGCTTGCAGATGACCTGTTaGTTGGCATGGTTCTTATCCATGAGCAGCTGCACGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ARSSVSFWVSLQMTC*LAWFLSMSSCTCCW
Trigger: CCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GGGGCTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGCGGCATTTCCAGCCCTaGATGGGTCCTTTGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GATVWKDRCPENAGLELGRHFQP*MGPLPP
Trigger: TGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCCG...CCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTAGACCTGGGTGCAGACTaGGCAGGATCCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLDLGAD*AGSSGS
Trigger: AGAGCCAGAGGATCCTGCCAAGTCTGCACCCAGGTC...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGCTGGCAGTTCCTGGCTaGCAGGTAGGCGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLLAVPG*QVGALG
Trigger: ACCAAGTGCGCCTACCTGCAAGCCAGGAACTGCCAG...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp ACAGTCAAAGACCGCACTGGAGAGATCGATGCTGTCCAAGGGGTTTaGATCCTGCGCGGTGCGCGAATAATACAGGTGGCACTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TVKDRTGEIDAVQGV*ILRGARIIQVALPL
Trigger: GAGAGGAAGTGCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 90 bp GCTTTCTCCTTCTCCGCCACCTTCCTCCAGATCTTGGTGACCTGGTaGATCTCAGAGTTGAGGAAGCGGTTCTGGGTCCGATATGCTTCC +
Preference number: 5 (lower is better)
Translates to: AFSFSATFLQILVTW*ISELRKRFWVRYAS
Trigger: GGAAGCATATCGGACCCAGAACCGCTTCCTCAACTCTGAGATCCACCAGGTCACCAAGATCTGGAGGAAGGTGGCGGAGAAGGAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GGGAATCTGTTCTTGCCTCCACTAAGTGTGTCCCAGGGATCGAACTCAGGTCATAGTGCAGGTGGGCTGTaGTGGAACTCCCAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: GNLFLPPLSVSQGSNSGHSAGGL*WNSQRF
Trigger: GAAGCGCTGGGAGTTCCACAACAGCCCACCTGCACT...ATGACCTGAGTTCGATCCCTGGGACACACTTAGTGGAGGCAAGAACAGATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CAA 90 bp CCTTTTCTTTTCCTAGAGTTGACCCTGTGGGTATGCCCACAGGCAGTCACGGCCTGGGAAGGTGTTGCTTaGCCGCTTGGGTTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PFLFLELTLWVCPQAVTAWEGVA*PLGFLR
Trigger: ACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCA...GGCCGTGACTGCCTGTGGGCATACCCACAGGGTCAACTCTAGGAAAAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 90 bp CACTGGAGAGATCGATGCTGTCCAAGGGGTTTGCATCCTGCGCGGTaGGCGAATAATACAGGTGGCACTTCCTCTCATCGTAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: HWRDRCCPRGLHPAR*ANNTGGTSSHRRRT
Trigger: GGTTCTTCTACGATGAGAGGAAGTGCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS GCA 90 bp GACCTGGTGGATCTCAGAGTTGAGGAAGCGGTTCTGGGTCCGATATaGTTCCATGTCATCCTTCAGATGCTCCATCCTCTCCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: DLVDLRVEEAVLGPI*FHVILQMLHPLLLA
Trigger: AGCCAGCAGGAGAGGATGGAGCATCTGAAGGATGACATGGAAGCATATCGGACCCAGAACCGCTTCCTCAACTCTGAGATCCACCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp TCAGTGTCTTGCTGTAGTACTCAGCCGGCAGTATGGTCTCCACAATaGCCACCAGGCACCAGAAGGCACTCTCCTCATCTTCTAGGACCA +
Preference number: 5 (lower is better)
Translates to: SVSCCSTQPAVWSPQ*PPGTRRHSPHLLGP
Trigger: TGGTCCTAGAAGATGAGGAGAGTGCCTTCTGGTGCCTGGTGGCCATTGTGGAGACCATACTGCCGGCTGAGTACTACAGCAAGACACTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CCAAGAGTAGCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTTGTGACTTGAGCTCTTaGGTGAGCATCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: PRVAEHKAQHCWNTVQLGCDLSS*VSISTC
Trigger: GCAGGTGCTGATGCTCACCAAAGAGCTCAAGTCACA...ACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGCTACTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GAGCTTGGCCTGCTCGTTCAGGGCTGGAGGAGGCAATTAATCCCAGAACACTTACAGGCTGTCCTGGAGTaGCAGGATCGCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: ELGLLVQGWRRQLIPEHLQAVLE*QDRFLI
Trigger: AATGAGGAAGCGATCCTGCAACTCCAGGACAGCCTG...TAAGTGTTCTGGGATTAATTGCCTCCTCCAGCCCTGAACGAGCAGGCCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CTGTGTAGTCCAGTGTTGGAACTGCTGGGATCTGAAGTGTGTACCCCACACCTGACCTTCCTCCAGATCTaGGTGACCTGGTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: LCSPVLELLGSEVCTPHLTFLQI*VTWWIS
Trigger: TGAGATCCACCAGGTCACCAAGATCTGGAGGAAGGT...CAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGGACTACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp GTGGGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTCCGCAGCTGCCGCAGTaGCTTCATGGGAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: VGCKQKASFRHEAVEIVPPQLPQ*LHGKWV
Trigger: AACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGG...AGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 90 bp CAGATCTTGGTGACCTGGTGGATCTCAGAGTTGAGGAAGCGGTTCTaGGTCCGATATGCTTCCATGTCATCCTTCAGATGCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: QILVTWWISELRKRF*VRYASMSSFRCSIL
Trigger: GAGGATGGAGCATCTGAAGGATGACATGGAAGCATATCGGACCCAGAACCGCTTCCTCAACTCTGAGATCCACCAGGTCACCAAGATCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AGTTGGCACCTCAGAGTGCCTCCTCCCTTGCCTCAGAGGAATTGCAGCAACTCTCCCTTGATGGGTCCTTaGCCGCCAAACTTACTTAAA +
Preference number: 5 (lower is better)
Translates to: SWHLRVPPPLPQRNCSNSPLMGP*PPNLLK
Trigger: TTTAAGTAAGTTTGGCGGCAAAGGACCCATCAAGGG...AGAGTTGCTGCAATTCCTCTGAGGCAAGGGAGGAGGCACTCTGAGGTGCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS-3UTR CAA 90 bp GGGGCTACTGTCTGGAAAGACAGATGCCCTGAAAATGCAGGCCTTGAACTTGGGAAGAATGGGAAGGTGTaGCTTTGCCGCTTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GATVWKDRCPENAGLELGKNGKV*LCRLGF
Trigger: GAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTT...CCCAAGTTCAAGGCCTGCATTTTCAGGGCATCTGTCTTTCCAGACAGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp CCAAGAGTAGCTGAACACAAGGCCCAGCACTGCTGGAACACAGTGCAGCTTGGTCAGATGACCTGTTGCTaGGCATGGTTCTTATCCATG +
Preference number: 5 (lower is better)
Translates to: PRVAEHKAQHCWNTVQLGQMTCC*AWFLSM
Trigger: CATGGATAAGAACCATGCCAAGCAACAGGTCATCTG...ACCAAGCTGCACTGTGTTCCAGCAGTGCTGGGCCTTGTGTTCAGCTACTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp ATGGAGTCTGAGGTCAGCCTGAGTTCCTCGAGACCTGGTCAGAAGACGAAATCCCCCTTGATGGGTCCTTaGCCGCCAAACTTACTTAAA +
Preference number: 5 (lower is better)
Translates to: MESEVSLSSSRPGQKTKSPLMGP*PPNLLK
Trigger: TTTAAGTAAGTTTGGCGGCAAAGGACCCATCAAGGG...GGATTTCGTCTTCTGACCAGGTCTCGAGGAACTCAGGCTGACCTCAGACTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS-3UTR CAA 90 bp AAGGGCACTGTTTATCCAGCAGCCTGTGCCCACAGTTCAACCTGTTTTTGGCTTCTGTCGCAGATGGTCTaGGTGAAGAAACGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: KGTVYPAACAHSSTCFWLLSQMV*VKKRRY
Trigger: GTACCTGCGTTTCTTCACCAAGACCATCTGCGACAG...AAGCCAAAAACAGGTTGAACTGTGGGCACAGGCTGCTGGATAAACAGTGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 90 bp GGCACTTCCTCTCATCGTAGAAGAACCAGCGGCATTTCCAGCCCTTaGTGGGTCCTTTGCCGCCAAACTTACTTAAATACCCACAGAGTT +
Preference number: 5 (lower is better)
Translates to: GTSSHRRRTSGISSP*WVLCRQTYLNTHRV
Trigger: AACTCTGTGGGTATTTAAGTAAGTTTGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCCGCTGGTTCTTCTACGATGAGAGGAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS-3UTR CAA 90 bp GGCTGTAAACAGAAGGCAAGCTTTAGGCATGAGGCTGTAGAGATAGTCCCTATGGCTTCCTCATTGTACTaGAAGATGGCCAGAGCATAT +
Preference number: 5 (lower is better)
Translates to: GCKQKASFRHEAVEIVPMASSLY*KMARAY
Trigger: ATATGCTCTGGCCATCTTCAAGTACAATGAGGAAGC...CATAGGGACTATCTCTACAGCCTCATGCCTAAAGCTTGCCTTCTGTTTACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp AGCGCCTGCACCTGCTGCTCCCGCAGGCCGGCCTCATaGGCCAGGCGCTCGCGGCCCTGCTCCAGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SACTCCSRRPAS*ARRSRPCSRAS
Trigger: GGAGGCTCTGGAGCAGGGCCGCGAGCGCCTGGCGCATGAGGCCGGCCTGCGGGAGCAGCAGGTGCAGGCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 72 bp GGGCACCCCTGCCCGAAGCAGCTGCTTGAGCTCAGCTaGGGGCGTGAGCTCCGTCAGGGTAGCCCAGCGGTC +
Preference number: 6 (lower is better)
Translates to: GHPCPKQLLELS*GRELRQGSPAV
Trigger: GACCGCTGGGCTACCCTGACGGAGCTCACGCCCTCAGCTGAGCTCAAGCAGCTGCTTCGGGCAGGGGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp AGGCGCTCGCGGCCCTGCTCCAGAGCCTCCACCCTCTaGTTCAGCTCAGCGATCTGCCGCACCTTGTGCCGG +
Preference number: 6 (lower is better)
Translates to: RRSRPCSRASTL*FSSAICRTLCR
Trigger: CCGGCACAAGGTGCGGCAGATCGCTGAGCTGAACCAGAGGGTGGAGGCTCTGGAGCAGGGCCGCGAGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 72 bp CTGGCACCGTCAGGAAGCCATAGTCGTCGTACTCGCTaGCGGGGCTCAGCCCCACGCTGTCCGCCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: LAPSGSHSRRTR*RGSAPRCPPLR
Trigger: CCGGAGAGGCGGACAGCGTGGGGCTGAGCCCCGTCAGCGAGTACGACGACTATGGCTTCCTGACGGTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 72 bp GAAGCTCTTGGTAGCAGCCGGGAGCCTGCAGGTGCCTaGCACGGCGGTGGACCAGCCACCTCCAGACTCGGG +
Preference number: 6 (lower is better)
Translates to: EALGSSREPAGA*HGGGPATSRLG
Trigger: CCCGAGTCTGGAGGTGGCTGGTCCACCGCCGTGTCAGGCACCTGCAGGCTCCCGGCTGCTACCAAGAGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp CTCGCGCAGCTCCGCCTCCAGTCGCTCTCGGTGGGCTaGCCGCAGCTGCCGCAGTTGCTTCATGGGAAATGG +
Preference number: 6 (lower is better)
Translates to: LAQLRLQSLSVG*PQLPQLLHGKW
Trigger: CCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGAGCTGCGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp CCTCCGAATCCCCGGGAGATACCACCTCGGGCTCCCTaGCCAAGCCCGGAGGCTGTGTGGACTCCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: PPNPREIPPRAP*PSPEAVWTPRK
Trigger: CTTCCTCGGAGTCCACACAGCCTCCGGGCTTGGCCAGGGAGCCCGAGGTGGTATCTCCCGGGGATTCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 72 bp ACCGGTCTCTGTCCTCGGTGGCTGCCAGGTAGGCACTaGAGGCTCGCTTCTCCTGCTGGGCAGCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: TGLCPRWLPGRH*RLASPAGQPPG
Trigger: CCCTGGAGGCTGCCCAGCAGGAGAAGCGAGCCTCCAGTGCCTACCTGGCAGCCACCGAGGACAGAGACCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp TCTAGCTCGCGCAGCTCCGCCTCCAGTCGCTCTCGGTaGGCTGCCCGCAGCTGCCGCAGTTGCTTCATGGGA +
Preference number: 6 (lower is better)
Translates to: SSSRSSASSRSR*AARSCRSCFMG
Trigger: TCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGAGCTGCGCGAGCTAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp CGGTGCTCTCGGGGCACCCCTGCCCGAAGCAGCTGCTaGAGCTCAGCTGAGGGCGTGAGCTCCGTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: RCSRGTPARSSC*SSAEGVSSVRV
Trigger: TACCCTGACGGAGCTCACGCCCTCAGCTGAGCTCAAGCAGCTGCTTCGGGCAGGGGTGCCCCGAGAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS TCA 72 bp TTGGTGGGGAAGGTCCGGTTGAGGTCCAGCTCGATCTaGCGAGCCGCAGGATGCTCACATGCCCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LVGKVRLRSSSI*RAAGCSHARPR
Trigger: CCGGGGCCGGGCATGTGAGCATCCTGCGGCTCGTCAGATCGAGCTGGACCTCAACCGGACCTTCCCCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp CCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTGGCTaGCAGGTAGGCACTGGAGGCTCGCTTCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: PDQLQPVSVLGG*QVGTGGSLLLL
Trigger: CAGCAGGAGAAGCGAGCCTCCAGTGCCTACCTGGCAGCCACCGAGGACAGAGACCGGTTGGAGCTGGTCCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp AGCCAGGGCGGCAGCAGGGGTGGCGGGAAGTGCAGGTaGGCTGTTGTGGAACTCCCAGCGCTTCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: SQGGSRGGGKCR*AVVELPALHLQ
Trigger: CTGCAGATGAAGCGCTGGGAGTTCCACAACAGCCCACCTGCACTTCCCGCCACCCCTGCTGCCGCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 72 bp TTGAGGCTCTCCACCCTGAGGCGAGTCTTCCACGAGTaGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: LRLSTLRRVFHE*PVGCRLGLLVA
Trigger: GGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCTCAGGGTGGAGAGCCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GTCGCCTTCTCCTTCGTCCTCGCTGACGCAGCCCTCTaGCGGTGCTCTGCCCAGGGATGCCCGTCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: VAFSFVLADAAL*RCSAQGCPSLQ
Trigger: TTGCAGAGACGGGCATCCCTGGGCAGAGCACCGCCAGAGGGCTGCGTCAGCGAGGACGAAGGAGAAGGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp TGCTCCATCCTCTCCTGCTGGCTCAGGAAGTCGCCGTaGGTAGCGTCGGCGGGCTGGGCAAGGTCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: CSILSCWLRKSP*VASAGWARSSV
Trigger: CACGGAGGACCTTGCCCAGCCCGCCGACGCTACCAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp TCCAGAGCCTCCACCCTCTGGTTCAGCTCAGCGATCTGCCGCACCTaGTGCCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SRASTLWFSSAICRT*CRTSSNRSLSSVAA
Trigger: GGCAGCCACCGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACAAGGTGCGGCAGATCGCTGAGCTGAACCAGAGGGTGGAGGCTCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp ACCCTGAGGCGAGTCTTCCACGAGTGGCCCGTGGGCTaGCGCTTGGGCCTGCTTGTTGCCACGGATGTTGTG +
Preference number: 6 (lower is better)
Translates to: TLRRVFHEWPVG*RLGLLVATDVV
Trigger: CACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCTCAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GGCGAGTCTTCCACGAGTGGCCCGTGGGCTGCCGCTTaGGCCTGCTTGTTGCCACGGATGTTGTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: GESSTSGPWAAA*ACLLPRMLCMV
Trigger: CACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp TGTGCCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTaGCTGCCAGGTAGGCACTGGAGGCTCGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: CAGPAPTGLCPR*LPGRHWRLASP
Trigger: AGGAGAAGCGAGCCTCCAGTGCCTACCTGGCAGCCACCGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp TGGCTCAGGAAGTCGCCGTTGGTAGCGTCGGCGGGCTaGGCAAGGTCCTCCGTGAGCTTCTGGGTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: WLRKSPLVASAG*ARSSVSFWVSL
Trigger: CAAGCTCACCCAGAAGCTCACGGAGGACCTTGCCCAGCCCGCCGACGCTACCAACGGCGACTTCCTGAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp ACCCTCTGGTTCAGCTCAGCGATCTGCCGCACCTTGTaGCGGACCAGCTCCAACCGGTCTCTGTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: TLWFSSAICRTL*RTSSNRSLSSV
Trigger: CACCGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACAAGGTGCGGCAGATCGCTGAGCTGAACCAGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp TTCTCCTTCGTCCTCGCTGACGCAGCCCTCTGGCGGTaGTCTGCCCAGGGATGCCCGTCTCTGCAAGTACTC +
Preference number: 6 (lower is better)
Translates to: FSFVLADAALWR*SAQGCPSLQVL
Trigger: GAGTACTTGCAGAGACGGGCATCCCTGGGCAGAGCACCGCCAGAGGGCTGCGTCAGCGAGGACGAAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp ATCAGCACCTGCTGCTCCAAGGCCGCCACCTTCTCCTaGGCTGTGCGGCTCCGAGCCAGTCCATCGGAAAAG +
Preference number: 6 (lower is better)
Translates to: ISTCCSKAATFS*AVRLRASPSEK
Trigger: CTTTTCCGATGGACTGGCTCGGAGCCGCACAGCCCAGGAGAAGGTGGCGGCCTTGGAGCAGCAGGTGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp AGGCGAGTCTTCCACGAGTGGCCCGTGGGCTGCCGCTaGGGCCTGCTTGTTGCCACGGATGTTGTGCATGGT +
Preference number: 6 (lower is better)
Translates to: RRVFHEWPVGCR*GLLVATDVVHG
Trigger: ACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp TCCACCCTCTGGTTCAGCTCAGCGATCTGCCGCACCTaGTGCCGGACCAGCTCCAACCGGTCTCTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: STLWFSSAICRT*CRTSSNRSLSS
Trigger: CGAGGACAGAGACCGGTTGGAGCTGGTCCGGCACAAGGTGCGGCAGATCGCTGAGCTGAACCAGAGGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp TCCGCCTCCAGTCGCTCTCGGTGGGCTGCCCGCAGCTaGCGCAGTTGCTTCATGGGAAATGGGTTCATGTCA +
Preference number: 6 (lower is better)
Translates to: SASSRSRWAARS*RSCFMGNGFMS
Trigger: TGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp CCGAAGCCCGGCCAGGTACTTGCTTTCTACCTGGCAGTTCCTGGCTaGCAGGTAGGCGCACTTGGTCAGCAGGGCTTTCTCCTTCTCCGC +
Preference number: 6 (lower is better)
Translates to: PKPGQVLAFYLAVPG*QVGALGQQGFLLLR
Trigger: GCGGAGAAGGAGAAAGCCCTGCTGACCAAGTGCGCCTACCTGCAAGCCAGGAACTGCCAGGTAGAAAGCAAGTACCTGGCCGGGCTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp CCGCCTTACAGTCAAAGACCGCACTGGAGAGATCGATaGTGTCCAAGGGGTTTGCATCCTGCGCGGTGCGCG +
Preference number: 6 (lower is better)
Translates to: PPYSQRPHWRDR*CPRGLHPARCA
Trigger: CGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACTGTAAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 72 bp CAGGCTGTAAGGCAGCTGCCGCACCCACGAGTCCAGTaGGTGTTTTCACAGGGCACAGGAACTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: QAVRQLPHPRVQ*VFSQGTGTPPA
Trigger: AGCTGGAGGAGTTCCTGTGCCCTGTGAAAACACCCACTGGACTCGTGGGTGCGGCAGCTGCCTTACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 72 bp TCCATGTCATCCTTCAGATGCTCCATCCTCTCCTGCTaGCTCAGGAAGTCGCCGTTGGTAGCGTCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SMSSFRCSILSC*LRKSPLVASAG
Trigger: GCCCGCCGACGCTACCAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCATCTGAAGGATGACATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GCCCGGCCAGGTACTTGCTTTCTACCTGGCAGTTCCTaGCTTGCAGGTAGGCGCACTTGGTCAGCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: ARPGTCFLPGSS*LAGRRTWSAGL
Trigger: AAGCCCTGCTGACCAAGTGCGCCTACCTGCAAGCCAGGAACTGCCAGGTAGAAAGCAAGTACCTGGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp TCCACCCTGAGGCGAGTCTTCCACGAGTGGCCCGTGGGCTGCCGCTaGGGCCTGCTTGTTGCCACGGATGTTGTGCATGGTGTTTTGTAT +
Preference number: 6 (lower is better)
Translates to: STLRRVFHEWPVGCR*GLLVATDVVHGVLY
Trigger: ATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTCGCCTCAGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GCTGTGCGGCTCCGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTaGCTTTGCCGCTTGGGTTTCTGCGTGGGACCTGAGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: AVRLRASPSEKNGKV*LCRLGFCVGPEGTE
Trigger: CTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGAGCCGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GCGTCGGCGGGCTGGGCAAGGTCCTCCGTGAGCTTCTGGGTGAGCTaGCAGATGACCTGTTGCTTGGCATGGTTCTTATCCATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASAGWARSSVSFWVS*QMTCCLAWFLSMSS
Trigger: GCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGACCTTGCCCAGCCCGCCGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp ACAGGGCACAGGAACTCCTCCAGCTCGGCCTCCTCTTaGTCTAGTTTGAGGTGCAGGGTGGGCCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: TGHRNSSSSASS*SSLRCRVGPFS
Trigger: TGAGAATGGGCCCACCCTGCACCTCAAACTAGAGCAAGAGGAGGCCGAGCTGGAGGAGTTCCTGTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS GCA 72 bp TCTTCCACGAGTGGCCCGTGGGCTGCCGCTTGGGCCTaGTTGTTGCCACGGATGTTGTGCATGGTGTTTTGT +
Preference number: 6 (lower is better)
Translates to: SSTSGPWAAAWA*LLPRMLCMVFC
Trigger: ACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp ACCTGTTGCTTGGCATGGTTCTTATCCATGAGCAGCTaGACGTGCTGCTGGAGCGCCTGCACCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TCCLAWFLSMSS*TCCWSACTCCS
Trigger: GGAGCAGCAGGTGCAGGCGCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp GCTTCCATGTCATCCTTCAGATGCTCCATCCTCTCCTaGTGGCTCAGGAAGTCGCCGTTGGTAGCGTCGGCG +
Preference number: 6 (lower is better)
Translates to: ASMSSFRCSILS*WLRKSPLVASA
Trigger: CGCCGACGCTACCAACGGCGACTTCCTGAGCCAGCAGGAGAGGATGGAGCATCTGAAGGATGACATGGAAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp AGCTTGTCAGGGAAACTGGAGGTCGGGCAGGTGAAGTaGTTGTTGGTGGGGAAGGTCCGGTTGAGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLSGKLEVGQVK*LLVGKVRLRSS
Trigger: GCTGGACCTCAACCGGACCTTCCCCACCAACAAGCACTTCACCTGCCCGACCTCCAGTTTCCCTGACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GGGTGCAGACTTGGCAGGATCCTCTGGCTCTTTTTCTaGAAGGCTGGGGTCAGAGATCGAGGGCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: GCRLGRILWLFF*KAGVRDRGLFP
Trigger: GGGGAACAGCCCTCGATCTCTGACCCCAGCCTTCCAGAAAAAGAGCCAGAGGATCCTGCCAAGTCTGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp TGGGACCTGAGGGCACAGAGGACCTGGGTGCAGACTTaGCAGGATCCTCTGGCTCTTTTTCTGGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: WDLRAQRTWVQT*QDPLALFLEGW
Trigger: CCAGCCTTCCAGAAAAAGAGCCAGAGGATCCTGCCAAGTCTGCACCCAGGTCCTCTGTGCCCTCAGGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp TCAGGGAAACTGGAGGTCGGGCAGGTGAAGTGCTTGTaGGTGGGGAAGGTCCGGTTGAGGTCCAGCTCGATC +
Preference number: 6 (lower is better)
Translates to: SGKLEVGQVKCL*VGKVRLRSSSI
Trigger: GATCGAGCTGGACCTCAACCGGACCTTCCCCACCAACAAGCACTTCACCTGCCCGACCTCCAGTTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp CGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTTGCTTTGCCGCTaGGGTTTCTGCGTGGGACCTGAGGGCACAGAGGACCTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: RASPSEKNGKVLLCR*GFCVGPEGTEDLGA
Trigger: TGCACCCAGGTCCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GCCTCCAGGGCCTTGTGTAGGATGATCACCAGCTCCTTCTGTGACTaGAGCTCTTTGGTGAGCATCAGCACCTGCTGCTCCAAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: ASRALCRMITSSFCD*SSLVSISTCCSKAA
Trigger: GGCGGCCTTGGAGCAGCAGGTGCTGATGCTCACCAAAGAGCTCAAGTCACAGAAGGAGCTGGTGATCATCCTACACAAGGCCCTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp CTCCGCCTCCAGTCGCTCTCGGTGGGCTGCCCGCAGCTGCCGCAGTaGCTTCATGGGAAATGGGTTCATGTCATTGAAGGCTATGCTCAT +
Preference number: 6 (lower is better)
Translates to: LRLQSLSVGCPQLPQ*LHGKWVHVIEGYAH
Trigger: ATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCCCACCGAGAGCGACTGGAGGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GAGTCTTCCACGAGTGGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTaGCCACGGATGTTGTGCATGGTGTTTTGTATTTCAGTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: ESSTSGPWAAAWACL*PRMLCMVFCISVPR
Trigger: TCTGGGCACTGAAATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGTGGAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp GACCGCACTGGAGAGATCGATGCTGTCCAAGGGGTTTaGATCCTGCGCGGTGCGCGAATAATACAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: DRTGEIDAVQGV*ILRGARIIQVA
Trigger: TGCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS GCA 72 bp CGAGTGGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTTaGCACGGATGTTGTGCATGGTGTTTTGTATTTCAG +
Preference number: 6 (lower is better)
Translates to: RVARGLPLGPAC*HGCCAWCFVFQ
Trigger: CTGAAATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp GCACCCGCTGGTCCACCTGGGATGCAGTCAGTGTCTTaGTGTAGTACTCAGCCGGCAGTATGGTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: APAGPPGMQSVS*CSTQPAVWSPQ
Trigger: TTGTGGAGACCATACTGCCGGCTGAGTACTACAGCAAGACACTGACTGCATCCCAGGTGGACCAGCGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GGCTGTGCGGCTCCGAGCCAGTCCATCGGAAAAGAATaGGAAGGTGTTGCTTTGCCGCTTGGGTTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: GCAAPSQSIGKE*EGVALPLGFLR
Trigger: ACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGAGCCGCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp AGACCGCACTGGAGAGATCGATGCTGTCCAAGGGGTTaGCATCCTGCGCGGTGCGCGAATAATACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: RPHWRDRCCPRG*HPARCANNTGG
Trigger: GCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CAA 72 bp GGCCAGGTACTTGCTTTCTACCTGGCAGTTCCTGGCTaGCAGGTAGGCGCACTTGGTCAGCAGGGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: GQVLAFYLAVPG*QVGALGQQGFL
Trigger: GAGAAAGCCCTGCTGACCAAGTGCGCCTACCTGCAAGCCAGGAACTGCCAGGTAGAAAGCAAGTACCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GCCTGCTTGGTGGCAGCCTTGAGGGTAATAACCCGGCTGGGAGTCTaGATTTCAAAAGTGCCCTCCTCCTCAGCGTCCGCCTTACAGTCA +
Preference number: 6 (lower is better)
Translates to: ACLVAALRVITRLGV*ISKVPSSSASALQS
Trigger: TGACTGTAAGGCGGACGCTGAGGAGGAGGGCACTTTTGAAATCAAGACTCCCAGCCGGGTTATTACCCTCAAGGCTGCCACCAAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CAA 90 bp GCCTTGTGTAGGATGATCACCAGCTCCTTCTGTGACTTGAGCTCTTaGGTGAGCATCAGCACCTGCTGCTCCAAGGCCGCCACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ALCRMITSSFCDLSS*VSISTCCSKAATFS
Trigger: GGAGAAGGTGGCGGCCTTGGAGCAGCAGGTGCTGATGCTCACCAAAGAGCTCAAGTCACAGAAGGAGCTGGTGATCATCCTACACAAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp AGGTCCTCCGTGAGCTTCTGGGTGAGCTTGCAGATGACCTGTTGCTaGGCATGGTTCTTATCCATGAGCAGCTGCACGTGCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RSSVSFWVSLQMTCC*AWFLSMSSCTCCWS
Trigger: GCTCCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp TTGGTCAGCAGGGCTTTCTCCTTCTCCGCCACCTTCCTCCAGATCTaGGTGACCTGGTGGATCTCAGAGTTGAGGAAGCGGTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LVSRAFSFSATFLQI*VTWWISELRKRFWV
Trigger: GACCCAGAACCGCTTCCTCAACTCTGAGATCCACCAGGTCACCAAGATCTGGAGGAAGGTGGCGGAGAAGGAGAAAGCCCTGCTGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp GCCAGTCCATCGGAAAAGAATGGGAAGGTGTTGCTTTaGCGCTTGGGTTTCTGCGTGGGACCTGAGGGCACA +
Preference number: 6 (lower is better)
Translates to: ASPSEKNGKVLL*RLGFCVGPEGT
Trigger: TGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp TCCGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTTaGTTTGCCGCTTGGGTTTCTGCGTGGGACCTGAGG +
Preference number: 6 (lower is better)
Translates to: SEPVHRKRMGRC*FAAWVSAWDLR
Trigger: CCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GCAGGTGGTGGGAGCGCACCTCCAAGGCCTGGATCTTaGCTAGCAGTTTTAGGTCTTCCATCTCGTAGTCTG +
Preference number: 6 (lower is better)
Translates to: AGGGSAPPRPGS*LAVLGLPSRSL
Trigger: CAGACTACGAGATGGAAGACCTAAAACTGCTAGCCAAGATCCAGGCCTTGGAGGTGCGCTCCCACCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp CAGTCAGTGTCTTGCTGTAGTACTCAGCCGGCAGTATaGTCTCCACAATGGCCACCAGGCACCAGAAGGCAC +
Preference number: 6 (lower is better)
Translates to: QSVSCCSTQPAV*SPQWPPGTRRH
Trigger: GTGCCTTCTGGTGCCTGGTGGCCATTGTGGAGACCATACTGCCGGCTGAGTACTACAGCAAGACACTGACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp ACGAGTGGCCCGTGGGCTGCCGCTTGGGCCTGCTTGTaGCCACGGATGTTGTGCATGGTGTTTTGTATTTCA +
Preference number: 6 (lower is better)
Translates to: TSGPWAAAWACL*PRMLCMVFCIS
Trigger: TGAAATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCACGGGCCACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp CCATCGGAAAAGAATGGGAAGGTGTTGCTTTGCCGCTaGGGTTTCTGCGTGGGACCTGAGGGCACAGAGGAC +
Preference number: 6 (lower is better)
Translates to: PSEKNGKVLLCR*GFCVGPEGTED
Trigger: GTCCTCTGTGCCCTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp CTCCGAGCCAGTCCATCGGAAAAGAATGGGAAGGTGTaGCTTTGCCGCTTGGGTTTCTGCGTGGGACCTGAG +
Preference number: 6 (lower is better)
Translates to: LRASPSEKNGKV*LCRLGFCVGPE
Trigger: CTCAGGTCCCACGCAGAAACCCAAGCGGCAAAGCAACACCTTCCCATTCTTTTCCGATGGACTGGCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp GGCTGGGCAAGGTCCTCCGTGAGCTTCTGGGTGAGCTaGCAGATGACCTGTTGCTTGGCATGGTTCTTATCC +
Preference number: 6 (lower is better)
Translates to: GWARSSVSFWVS*QMTCCLAWFLS
Trigger: GGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAGGACCTTGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GCCCGCAGCTGCCGCAGTTGCTTCATGGGAAATGGGTTCATGTCATaGAAGGCTATGCTCATGAGCTTCCGGCTGTCGCAGATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: ARSCRSCFMGNGFMS*KAMLMSFRLSQMVL
Trigger: CAAGACCATCTGCGACAGCCGGAAGCTCATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp GATCGATGCTGTCCAAGGGGTTTGCATCCTGCGCGGTaGGCGAATAATACAGGTGGCACTTCCTCTCATCGT +
Preference number: 6 (lower is better)
Translates to: DRCCPRGLHPAR*ANNTGGTSSHR
Trigger: ACGATGAGAGGAAGTGCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS GCA 72 bp GGGATGGAAGGTGTTCGACCACGTCTCCTGGACTCCTaGTCCTGTCGAAGTTACTACTCCCACAGCCTGTAT +
Preference number: 6 (lower is better)
Translates to: GMEGVRPRLLDS*SCRSYYSHSLY
Trigger: ATACAGGCTGTGGGAGTAGTAACTTCGACAGGAGCAGGAGTCCAGGAGACGTGGTCGAACACCTTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS CAA 72 bp TGGGCTGCCGCTTGGGCCTGCTTGTTGCCACGGATGTaGTGCATGGTGTTTTGTATTTCAGTGCCCAGATGC +
Preference number: 6 (lower is better)
Translates to: WAAAWACLLPRM*CMVFCISVPRC
Trigger: GCATCTGGGCACTGAAATACAAAACACCATGCACAACATCCGTGGCAACAAGCAGGCCCAAGCGGCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp TACAGTCAAAGACCGCACTGGAGAGATCGATGCTGTCCAAGGGGTTaGCATCCTGCGCGGTGCGCGAATAATACAGGTGGCACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: YSQRPHWRDRCCPRG*HPARCANNTGGTSS
Trigger: AGAGGAAGTGCCACCTGTATTATTCGCGCACCGCGCAGGATGCAAACCCCTTGGACAGCATCGATCTCTCCAGTGCGGTCTTTGACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CCA 72 bp TTCTGGGTGAGCTTGCAGATGACCTGTTGCTTGGCATaGTTCTTATCCATGAGCAGCTGCACGTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: FWVSLQMTCCLA*FLSMSSCTCCW
Trigger: CCAGCAGCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CCA 72 bp GGCTGCCCGCAGCTGCCGCAGTTGCTTCATGGGAAATaGGTTCATGTCATTGAAGGCTATGCTCATGAGCTT +
Preference number: 6 (lower is better)
Translates to: GCPQLPQLLHGK*VHVIEGYAHEL
Trigger: AAGCTCATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCAGCTGCGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp GTGAGCTTCTGGGTGAGCTTGCAGATGACCTGTTGCTaGGCATGGTTCTTATCCATGAGCAGCTGCACGTGC +
Preference number: 6 (lower is better)
Translates to: VSFWVSLQMTCC*AWFLSMSSCTC
Trigger: GCACGTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp CTCCGTGAGCTTCTGGGTGAGCTTGCAGATGACCTGTaGCTTGGCATGGTTCTTATCCATGAGCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LRELLGELADDL*LGMVLIHEQLH
Trigger: GTGCAGCTGCTCATGGATAAGAACCATGCCAAGCAACAGGTCATCTGCAAGCTCACCCAGAAGCTCACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp TACTTGAAGATGGCCAGAGCATATCGGAACACCACCTaGGTCCCTTCATACAGGAAGGCATCCCAGACCCGC +
Preference number: 6 (lower is better)
Translates to: YLKMARAYRNTT*VPSYRKASQTR
Trigger: GCGGGTCTGGGATGCCTTCCTGTATGAAGGGACCAAGGTGGTGTTCCGATATGCTCTGGCCATCTTCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp ACGCAGGTACTGGTAGATCTCCAGGCTGTCCTGGAGTaGCAGGATCGCTTCCTCATTGTACTTGAAGATGGC +
Preference number: 6 (lower is better)
Translates to: TQVLVDLQAVLE*QDRFLIVLEDG
Trigger: GCCATCTTCAAGTACAATGAGGAAGCGATCCTGCAACTCCAGGACAGCCTGGAGATCTACCAGTACCTGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp TGCCGCAGTTGCTTCATGGGAAATGGGTTCATGTCATaGAAGGCTATGCTCATGAGCTTCCGGCTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: CRSCFMGNGFMS*KAMLMSFRLSQ
Trigger: CTGCGACAGCCGGAAGCTCATGAGCATAGCCTTCAATGACATGAACCCATTTCCCATGAAGCAACTGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp ATCTCCAGGCTGTCCTGGAGTTGCAGGATCGCTTCCTCATTGTACTaGAAGATGGCCAGAGCATATCGGAACACCACCTTGGTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: ISRLSWSCRIASSLY*KMARAYRNTTLVPS
Trigger: TGAAGGGACCAAGGTGGTGTTCCGATATGCTCTGGCCATCTTCAAGTACAATGAGGAAGCGATCCTGCAACTCCAGGACAGCCTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 90 bp GGTGAAGAAACGCAGGTACTGGTAGATCTCCAGGCTGTCCTGGAGTaGCAGGATCGCTTCCTCATTGTACTTGAAGATGGCCAGAGCATA +
Preference number: 6 (lower is better)
Translates to: GEETQVLVDLQAVLE*QDRFLIVLEDGQSI
Trigger: TATGCTCTGGCCATCTTCAAGTACAATGAGGAAGCGATCCTGCAACTCCAGGACAGCCTGGAGATCTACCAGTACCTGCGTTTCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS CAA 72 bp CTGTCCTGGAGTTGCAGGATCGCTTCCTCATTGTACTaGAAGATGGCCAGAGCATATCGGAACACCACCTTG +
Preference number: 6 (lower is better)
Translates to: LSWSCRIASSLY*KMARAYRNTTL
Trigger: CAAGGTGGTGTTCCGATATGCTCTGGCCATCTTCAAGTACAATGAGGAAGCGATCCTGCAACTCCAGGACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084621.12
CDS GCA 72 bp CTGTCGAAGTTACTACTCCCACAGCCTGTATTTCAGTaGCCAGATGCTTTAGGGAGATGTTCTGAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LSKLLLPQPVFQ*PDALGRCSEGL
Trigger: CAGCCCTTCAGAACATCTCCCTAAAGCATCTGGGCACTGAAATACAGGCTGTGGGAGTAGTAACTTCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107750.2
CDS TCA 72 bp TCTCATCGTAGAAGAACCAGCGGCATTTCCAGCCCTTaGTGGGTCCTTTGCCGCCAAACTTACTTAAATACC +
Preference number: 6 (lower is better)
Translates to: SHRRRTSGISSP*WVLCRQTYLNT
Trigger: GGTATTTAAGTAAGTTTGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCCGCTGGTTCTTCTACGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2
CDS CAA 72 bp AAGAACCAGCGGCATTTCCAGCCCTTGATGGGTCCTTaGCCGCCAAACTTACTTAAATACCCACAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: KNQRHFQPLMGP*PPNLLKYPQSF
Trigger: GAAACTCTGTGGGTATTTAAGTAAGTTTGGCGGCAAAGGACCCATCAAGGGCTGGAAATGCCGCTGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084621.12
ENSMUST00000107750.2