Pregenerated sensors for TBC1D19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039178Ensembl transcript IDs: ENSMUST00000037337.10, ENSMUST00000201958.4, ENSMUST00000202528.4, ENSMUST00000202599.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTCAGCTCTCAGTGCTGTGGGACTTCCTTGTCGGATGTACTGCTaGGCAGCAGCGCTGTCCTGCTGCGCTAGAACTTTCTGCCCAATA | + |
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Preference number: 1 (lower is better) Translates to: SSALSAVGLPCRMYC*AAALSCCARTFCPI Trigger: TATTGGGCAGAAAGTTCTAGCGCAGCAGGACAGCGCTGCTGCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR GCA 90 bp | CTGACTGGAGATATTCAGAATGAGCGCCCAGAGCTCAGCTCTCAGTaGTGTGGGACTTCCTTGTCGGATGTACTGCTGAGCAGCAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: LTGDIQNERPELSSQ*CGTSLSDVLLSSSA Trigger: AGCGCTGCTGCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTGAGCTCTGGGCGCTCATTCTGAATATCTCCAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR GCA 90 bp | TGCTTTCCTCATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAAAGGAAACCTTGGCCTTATGCTTCG | + |
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Preference number: 1 (lower is better) Translates to: CFPHVHQRFFEMLRG*RRMTWQRKPWPYAS Trigger: CGAAGCATAAGGCCAAGGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATGAGGAAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
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| 3UTR GCA 90 bp | GGGATCTGCATGGAGGATGCTCGCTTCAGCAGAACTGATGTCTATTaGTTCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GICMEDARFSRTDVY*FSLDNHQHASAVFG Trigger: ACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGAAGCAATAGACATCAGTTCTGCTGAAGCGAGCATCCTCCATGCAGATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR TCA 90 bp | TGGGCGGATAGAAAACAGCATATTCTTCTAATCCTAGTTTTCCTCTaGTGTATGACTTCGGCGGTGAAGCACTGTTGTATGCAAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: WADRKQHILLILVFL*CMTSAVKHCCMQSG Trigger: GCCACTTTGCATACAACAGTGCTTCACCGCCGAAGTCATACATCAGAGGAAAACTAGGATTAGAAGAATATGCTGTTTTCTATCCGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR GCA 90 bp | GCTGTGTTACTTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTaGATATATGGTACGAGCCTGTTACCAGTTAGGGATCTGCATGGA | + |
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Preference number: 1 (lower is better) Translates to: AVLLLQVYYSVVSSY*IYGTSLLPVRDLHG Trigger: TCCATGCAGATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAAGTAACACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGCCAGAACTGCTTCAGCTGCAGCCAGTGATGTCACCTCCATCAGGTTCACGGAGGAGGGAACATaGTCTTTATTGGCTTATGTG | + |
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Preference number: 2 (lower is better) Translates to: RSARTASAAASDVTSIRFTEEGT*SLLAYV Trigger: CACATAAGCCAATAAAGATCATGTTCCCTCCTCCGT...GAACCTGATGGAGGTGACATCACTGGCTGCAGCTGAAGCAGTTCTGGCTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCGTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGGGGGGTGCAGAAGGATaGCTTGGCAAAGGAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: IRSHLIPLIEKLFLLHSWGGAEG*LGKGNL Trigger: AAGGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCC...CCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGAT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: VPISFHLLRSSFCSIAGLEMLRG*RRMTWQ Trigger: TTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTC...GAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| 3UTR-3UTR GCA 90 bp | TCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCTTTCGTGCTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: SFHLLRSSFCSIAGLFRAEMLRG*RRMTWQ Trigger: TTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTC...AGCACGAAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| 3UTR CAA 90 bp | AATCCTAGTTTTCCTCTGATGTATGACTTCGGCGGTGAAGCACTGTaGTATGCAAAGTGGCCCAGTACAGACGTATCCCGTGAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: NPSFPLMYDFGGEAL*YAKWPSTDVSREKQ Trigger: TTGCTTTTCACGGGATACGTCTGTACTGGGCCACTTTGCATACAACAGTGCTTCACCGCCGAAGTCATACATCAGAGGAAAACTAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGCTGACTGGAGATATTCAGAATGAGCGCCCAGAGCTCAGCTCTCAGTGCAGAACTGATGTCTATTaGTTCTCTCTTGACAATCAT | + |
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Preference number: 2 (lower is better) Translates to: LRLTGDIQNERPELSSQCRTDVY*FSLDNH Trigger: ATGATTGTCAAGAGAGAAGCAATAGACATCAGTTCT...GCACTGAGAGCTGAGCTCTGGGCGCTCATTCTGAATATCTCCAGTCAGCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTCAGCTCTCAGTGCTGTaGGACTTCCTTGTCGGATGT | + |
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Preference number: 2 (lower is better) Translates to: SLLTIISMQAQYLVCRVIQLSVL*DFLVGC Trigger: ACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTG...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTTCTGCTCCATAGCTGGTCTCTTTCGTGCTAGTGGGATACTCAGTTCTTGCAGAAGGATGACTTaGCAAAGGAAACAAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: SSFCSIAGLFRASGILSSCRRMT*QRKQSK Trigger: CTTACTTTGTTTCCTTTGCCAAGTCATCCTTCTGCA...AGAACTGAGTATCCCACTAGCACGAAAGAGACCAGCTATGGAGCAGAAAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202528.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAATGAGTCCTAAAACTAAGAGAATCACCATTTTCATAATTTGGGTTGCGGGGGGTGCAGAAGGATaGCTTGGCAAAGGAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: TQMSPKTKRITIFIIWVAGGAEG*LGKGNK Trigger: TTTGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCC...CGCAACCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000202528.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGGTCGTGCTGGATCACATTGGTCTTAAGCTGCTCATAATACAGGATATCTTGAGAAGCTCTTTCTaGTCCATAGCTGGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QKVVLDHIGLKLLIIQDILRSSF*SIAGLF Trigger: AAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAA...GATATCCTGTATTATGAGCAGCTTAAGACCAATGTGATCCAGCACGACCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTTACATGGAAAACCCATaGAAAGGGATGACACCATTG | + |
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Preference number: 2 (lower is better) Translates to: SLLTIISMQAQYLVCRVIYMENP*KGMTPL Trigger: CAATGGTGTCATCCCTTTCCATGGGTTTTCCATGTA...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR CAA 90 bp | TATCCGAAGTGGTTGAGCTCCAATTTCTCGCAGATGATAAAAGAGTaGGGGAAGATACGTTTGAAGAAGAGTTTCAAACAGCAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: YPKWLSSNFSQMIKE*GKIRLKKSFKQQTE Trigger: CTCTGTTTGCTGTTTGAAACTCTTCTTCAAACGTATCTTCCCCAACTCTTTTATCATCTGCGAGAAATTGGAGCTCAACCACTTCGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAATGAGTCCTAAAACTAAGAGAATCACCATTTTCATAATTTGGGTTGCGAAAGGTTCTTTGAGATaGTCAGGGGGTGCAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TQMSPKTKRITIFIIWVAKGSLR*SGGAEG Trigger: TCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTT...CGCAACCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCACGGAGGAGGGAACATaGTCTTTATTGGCTTATGTG | + |
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Preference number: 2 (lower is better) Translates to: FFKFITVSLVLIAYMVRATEEGT*SLLAYV Trigger: CACATAAGCCAATAAAGATCATGTTCCCTCCTCCGT...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCCTATTGCTTCTCTCTTaGCAATCATCAGCATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: FFKFITVSLVLIAYMVRALLLLS*QSSACK Trigger: CTTGCATGCTGATGATTGTCAAGAGAGAAGCAATAG...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR TCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGCTATTGCTTCTCTCTTaGCAATCATCAGCATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKLLLLS*QSSACK Trigger: CTTGCATGCTGATGATTGTCAAGAGAGAAGCAATAG...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTATCACATCTTTATAAATaGGACTGTCCACCAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ITVSLVLIAYMVRACYQLSHLYK*DCPPKG Trigger: ACCTTTTGGTGGACAGTCTCATTTATAAAGATGTGA...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCAGAACTGATGTCTATTaGTTCTCTCTTGACAATCAT | + |
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Preference number: 2 (lower is better) Translates to: FFKFITVSLVLIAYMVRARTDVY*FSLDNH Trigger: ATGATTGTCAAGAGAGAAGCAATAGACATCAGTTCT...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | CTCAGTGCTGTGGGACTTCCTTGTCGGATGTACTGCTaGGCAGCAGCGCTGTCCTGCTGCGCTAGAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: LSAVGLPCRMYC*AAALSCCARTF Trigger: GAAAGTTCTAGCGCAGCAGGACAGCGCTGCTGCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | AGAAAGGTCAGCCAGAACTGCTTCAGCTGCAGCCAGTaGTGTCACCTCCATCAGGTTCACTGCTCGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: RKVSQNCFSCSQ*CHLHQVHCSES Trigger: GCTTTCCGAGCAGTGAACCTGATGGAGGTGACATCACTGGCTGCAGCTGAAGCAGTTCTGGCTGACCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR GCA 72 bp | GATATTCAGAATGAGCGCCCAGAGCTCAGCTCTCAGTaGTGTGGGACTTCCTTGTCGGATGTACTGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: DIQNERPELSSQ*CGTSLSDVLLS Trigger: GCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTGAGCTCTGGGCGCTCATTCTGAATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CAA 90 bp | GTGATGTCACCTCCATCAGGTTCACTGCTCGGAAAGCAAACACGGCAGCTGCCAAAGTTCAGGAGGCACTaGTGTAGAATCATCTATTCC | + |
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Preference number: 3 (lower is better) Translates to: VMSPPSGSLLGKQTRQLPKFRRH*CRIIYS Trigger: GGAATAGATGATTCTACACAAGTGCCTCCTGAACTT...TGGCAGCTGCCGTGTTTGCTTTCCGAGCAGTGAACCTGATGGAGGTGACATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | AAAGGTTCTTTGAGATGCTCAGGGGGTGCAGAAGGATaGCTTGGCAAAGGAAACCTTGGCCTTATGCTTCGG | + |
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Preference number: 3 (lower is better) Translates to: KGSLRCSGGAEG*LGKGNLGLMLR Trigger: CCGAAGCATAAGGCCAAGGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
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| 3UTR GCA 72 bp | GCATATATGGTACGAGCCTGTTACCAGTTAGGGATCTaGATGGAGGATGCTCGCTTCAGCAGAACTGATGTC | + |
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Preference number: 3 (lower is better) Translates to: AYMVRACYQLGI*MEDARFSRTDV Trigger: GACATCAGTTCTGCTGAAGCGAGCATCCTCCATGCAGATCCCTAACTGGTAACAGGCTCGTACCATATATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR GCA 72 bp | CATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAAAGGAAACCTTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: HVHQRFFEMLRG*RRMTWQRKPWP Trigger: AGGCCAAGGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
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| 3UTR-3UTR CAA 90 bp | TATCCGAAGTGGTTGAGCTCCAATTTCTCGCAGATGATAAAAGAGTTGGGGAAGTGCTGTGGGACTTCCTaGTCGGATGTACTGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: YPKWLSSNFSQMIKELGKCCGTS*SDVLLS Trigger: GCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCA...CTTCCCCAACTCTTTTATCATCTGCGAGAAATTGGAGCTCAACCACTTCGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR GCA 72 bp | CATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAAAGGAAACAAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: HVHQRFFEMLRG*RRMTWQRKQSK Trigger: CTTACTTTGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202528.4 |
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| 3UTR GCA 72 bp | GTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTaGTCCATAGCTGGTCTCTTTCGTGCTAGTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: VPISFHLLRSSF*SIAGLFRASGI Trigger: TATCCCACTAGCACGAAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTCAGCGACCTCGAAGATCAGGTGACGGTAGCAAACAGAAAAATTTGAAGATCTCATTCCACTTATaGAGAAGCTCTTTCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: CCQRPRRSGDGSKQKNLKISFHL*RSSFCS Trigger: GGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGAT...CTTCAAATTTTTCTGTTTGCTACCGTCACCTGATCTTCGAGGTCGCTGACAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | ATGGTGCAACATACATGGAAAACCCATGGAAAGGGATaGCACCATTGGGCGGATAGAAAACAGCATATTCTT | + |
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Preference number: 3 (lower is better) Translates to: MVQHTWKTHGKG*HHWADRKQHIL Trigger: AAGAATATGCTGTTTTCTATCCGCCCAATGGTGTCATCCCTTTCCATGGGTTTTCCATGTATGTTGCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CAA 90 bp | AGGTGTTGTCAGCGACCTCGAAGATCAGGTGACGGTAGCAAACAGAAAAATTTGAGTATTTCCAGAGAGTaGTATCCTAGAATTCTATCC | + |
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Preference number: 3 (lower is better) Translates to: RCCQRPRRSGDGSKQKNLSISRE*YPRILS Trigger: GGATAGAATTCTAGGATACAACTCTCTGGAAATACT...CAAATTTTTCTGTTTGCTACCGTCACCTGATCTTCGAGGTCGCTGACAACACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | ATACGTTTGAAGAAGAGTTTCAAACAGCAAACAGAGTaGCACAATACCAGAAGGATGAGAGGAGATGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: IRLKKSFKQQTE*HNTRRMRGDGV Trigger: CACTCCATCTCCTCTCATCCTTCTGGTATTGTGTCACTCTGTTTGCTGTTTGAAACTCTTCTTCAAACGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR-3UTR CAA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCTCTATTGCTTCTCTCTaGACAATCATCAGCATGCAA | + |
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Preference number: 3 (lower is better) Translates to: VSLVLIAYMVRACYQLGISIASL*TIISMQ Trigger: TTGCATGCTGATGATTGTCAAGAGAGAAGCAATAGA...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCTACAAAGCATTCTTTCAATTCAGGGATGTCTTTTACTTTCAGAGGAACTTTACACCAAAGGTTCTTaGAGATGCTCAGGGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: VLQSILSIQGCLLLSEELYTKGS*RCSGGA Trigger: TGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTA...AAGTTCCTCTGAAAGTAAAAGACATCCCTGAATTGAAAGAATGCTTTGTAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202528.4 |
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| 3UTR GCA 72 bp | CTTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTaGATATATGGTACGAGCCTGTTACCAGTTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LLQVYYSVVSSY*IYGTSLLPVRD Trigger: ATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCTACAAAGCATTCTTTCAATTCAGGGATGTCTTTTACTTTCAGAGGAACTTTCTATTGCTTCTCTCTaGACAATCATCAGCATGCAA | + |
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Preference number: 3 (lower is better) Translates to: VLQSILSIQGCLLLSEELSIASL*TIISMQ Trigger: TTGCATGCTGATGATTGTCAAGAGAGAAGCAATAGA...AAGTTCCTCTGAAAGTAAAAGACATCCCTGAATTGAAAGAATGCTTTGTAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR TCA 72 bp | AGTGAAAACTTCTTAGGTTTAACGGAGGAGGGAACATaGTCTTTATTGGCTTATGTGCAAAGTTTAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SENFLGLTEEGT*SLLAYVQSLIL Trigger: CAGAATTAAACTTTGCACATAAGCCAATAAAGATCATGTTCCCTCCTCCGTTAAACCTAAGAAGTTTTCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| 3UTR CCA 72 bp | ATACAATTTGTAAGGTTCATGATACAGAAAACACAATaGTGCAACATACATGGAAAACCCATGGAAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: IQFVRFMIQKTQ*CNIHGKPMERD Trigger: ATCCCTTTCCATGGGTTTTCCATGTATGTTGCACCATTGTGTTTTCTGTATCATGAACCTTACAAATTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| 3UTR CAA 72 bp | CGCCCAGAGCTCAGCTCTCAGTGCTGTGGGACTTCCTaGTCGGATGTACTGCTGAGCAGCAGCGCTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RPELSSQCCGTS*SDVLLSSSAVL Trigger: CAGGACAGCGCTGCTGCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTGAGCTCTGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTGACTGGAGATATTCAGAATGAGCGCCCAGAGCTCAGCTCTCAGTGCAGTTTCTGGACGATCTaGGCAATGATGAGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LRLTGDIQNERPELSSQCSFWTI*AMMRDR Trigger: CCTGTCCCTCATCATTGCCCAGATCGTCCAGAAACT...GCACTGAGAGCTGAGCTCTGGGCGCTCATTCTGAATATCTCCAGTCAGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
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| CDS-3UTR TCA 90 bp | ATCCGTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGCTGATCTCGGGTCTCTaGAGACAGGACCAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSHLIPLIEKLFLLHSWLISGL*RQDQAC Trigger: GCAGGCCTGGTCCTGTCTTCAGAGACCCGAGATCAG...CCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | CTCATCCGTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCCTGATCTCGGGTCTCTaGAGACAGGACCAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIRSHLIPLIEKLFLLHSLISGL*RQDQAC Trigger: GCAGGCCTGGTCCTGTCTTCAGAGACCCGAGATCAG...GCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR CCA 90 bp | CTCATCCGTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCGTCCACCTGCTGTCTTaGTCCCCACCAAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRSHLIPLIEKLFLLHSVHLLS*SPPRWP Trigger: TGGCCATCTTGGTGGGGACCAAGACAGCAGGTGGAC...GCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | GTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTGCAGAAGGATGACTTGGCAAACAAATTGGAGCCCTTaGGTTTCTGGACGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHQRFFEMLRGCRRMTWQTNWSP*VSGRSG Trigger: CCCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGT...TTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTTCCTCATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTGCAGAAACAAATTGGAGCCCTTaGGTTTCTGGACGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CAFLMYTKGSLRCSGGAETNWSP*VSGRSG Trigger: CCCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGT...TTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATGAGGAAAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTGCCTGCCGTTCCAGCTaGGCATACAAATTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIACRSS*AYKLEP Trigger: GGGCTCCAATTTGTATGCTCAGCTGGAACGGCAGGC...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
||
| CDS-3UTR TCA 90 bp | GTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCACAAATTGGAGCCCTTaGGTTTCTGGACGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPISFHLLRSSFCSIAGLTNWSP*VSGRSG Trigger: CCCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGT...GAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTGAGCTCAGCTCTCAGTaGTGTGGGACTTCCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIELSSQ*CGTSLS Trigger: CGACAAGGAAGTCCCACAGCACTGAGAGCTGAGCTC...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | ACCCAAATGAGTCCTAAAACTAAGAGAATCACCATTTTCATAATTTGGGTTGCGCTGATCTCGGGTCTCTaGAGACAGGACCAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQMSPKTKRITIFIIWVALISGL*RQDQAC Trigger: GCAGGCCTGGTCCTGTCTTCAGAGACCCGAGATCAG...CGCAACCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCACACCAAAGGTTCTTTaGGATGCTCAGGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGITPKVL*DAQGVQ Trigger: CTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGT...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGIEMLRG*RRMTWQ Trigger: TTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTC...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCACAAATTGGAGCCCTTaGGTTTCTGGACGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGITNWSP*VSGRSG Trigger: CCCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGT...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
||
| CDS-3UTR TCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCCTGATCTCGGGTCTCTaGAGACAGGACCAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFKFITVSLVLIAYMVRALISGL*RQDQAC Trigger: GCAGGCCTGGTCCTGTCTTCAGAGACCCGAGATCAG...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
||
| CDS-3UTR GCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCAGCAAACACGGCAGCTaGCAGCACAGCAAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGISKHGS*QHSKYF Trigger: GAAATACTTGCTGTGCTGGCAGCTGCCGTGTTTGCT...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTAGATGGAGTGGAGTCTaGAGAAAAAGCGGACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIRWSGV*RKSGRT Trigger: TGTACGTCCGCTTTTTCTTCAGACTCCACTCCATCT...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTAAAGGTTCTTTGAGATaGTCAGGGGGTGCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIKGSLR*SGGAEG Trigger: TCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTT...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| 3UTR CAA 72 bp | AAATCTGGCTCATCCGTTCCCATCTCATTCCACTTATaGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSGSSVPISFHL*RSSFCSIAGLF Trigger: AAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGATGAGCCAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR TCA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTATTCAGCTGCAGCCAGTaGTGTCACCTCCATCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITVSLVLIAYMVRACYQLFSCSQ*CHLHQV Trigger: AACCTGATGGAGGTGACATCACTGGCTGCAGCTGAA...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGGGGGGTGCAGAAGGATaGCTTGGCAAAGGAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKGGAEG*LGKGNT Trigger: TGTGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCC...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCTCTCATTCCACTTATTaGGAAGCTCTTTCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGISHSTY*EALSAP Trigger: TGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGA...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGTGGAGATATTCAGAATaGGCGCCCAGAGCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKWRYSE*APRAQL Trigger: GAGCTGAGCTCTGGGCGCTCATTCTGAATATCTCCA...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTTGGGGAAGATACGTTTaGAGAAGAGTTTCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIWGRYV*RRVSNS Trigger: GCTGTTTGAAACTCTTCTTCAAACGTATCTTCCCCA...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR TCA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGGGTGCAGAAGGATaGCTTGGCAAAGGAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: ITVSLVLIAYMVRACYQLGGAEG*LGKGNI Trigger: AATGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCC...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTTTGAGAAGCTCTTTCTaGTCCATAGCTGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVILRSSF*SIAGLF Trigger: AAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAA...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR GCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGCTCCATCAGGTTCACTaGTCGGAAAGCAAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKLHQVH*SESKHG Trigger: GCCGTGTTTGCTTTCCGAGCAGTGAACCTGATGGAG...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CCA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAAGTTTCTGGACGATCTaGGCAATGATGAGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITVSLVLIAYMVRACYQLSFWTI*AMMRDR Trigger: CCTGTCCCTCATCATTGCCCAGATCGTCCAGAAACT...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| CDS-3UTR CCA 90 bp | ACCCAAATGAGTCCTAAAACTAAGAGAATCACCATTTTCATAATTTGGGTTGCGAGTTTCTGGACGATCTaGGCAATGATGAGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQMSPKTKRITIFIIWVASFWTI*AMMRDR Trigger: CCTGTCCCTCATCATTGCCCAGATCGTCCAGAAACT...CGCAACCCAAATTATGAAAATGGTGATTCTCTTAGTTTTAGGACTCATTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| CDS-3UTR CCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCCAGCTCTCAGTGCTGTaGGACTTCCTTGTCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FFKFITVSLVLIAYMVRAQLSVL*DFLVGC Trigger: ACATCCGACAAGGAAGTCCCACAGCACTGAGAGCTG...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTATGGTGCAACATACATaGAAAACCCATGGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLTIISMQAQYLVCRVIMVQHT*KTHGKG Trigger: TCCCTTTCCATGGGTTTTCCATGTATGTTGCACCAT...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCATTCTTTCAATTCAGGGATGTCTTTTACTTTCAGAGGAACTTGGATAGTTTCTGGACGATCTaGGCAATGATGAGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKAFFQFRDVFYFQRNLDSFWTI*AMMRDR Trigger: CCTGTCCCTCATCATTGCCCAGATCGTCCAGAAACT...ATCCAAGTTCCTCTGAAAGTAAAAGACATCCCTGAATTGAAAGAATGCTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCGAGCCCTTGAGTTTCTaGACGATCTGGGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: FFKFITVSLVLIAYMVRAEPLSF*TIWAMM Trigger: CATCATTGCCCAGATCGTCCAGAAACTCAAGGGCTC...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
||
| 3UTR CAA 72 bp | TGGTTGAGCTCCAATTTCTCGCAGATGATAAAAGAGTaGGGGAAGATACGTTTGAAGAAGAGTTTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: WLSSNFSQMIKE*GKIRLKKSFKQ Trigger: CTGTTTGAAACTCTTCTTCAAACGTATCTTCCCCAACTCTTTTATCATCTGCGAGAAATTGGAGCTCAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
||
| CDS-3UTR GCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGTCCACCAAAAGGTCGTaGTGGATCACATTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKSTKRS*WITLVL Trigger: TAAGACCAATGTGATCCAGCACGACCTTTTGGTGGA...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCAATAGTAATCATCATTaGTTGCTGTCAGCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLVLIAYMVRACYQLGINSNHH*LLSASH Trigger: ATGTGAAGCTGACAGCAAGCAATGATGATTACTATT...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCACCAAAAGGTCGTGCTaGATCACATTGGTCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFKFITVSLVLIAYMVRATKRSC*ITLVLS Trigger: GCTTAAGACCAATGTGATCCAGCACGACCTTTTGGT...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR GCA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTACAGAAAACACAATGGTaGAACATACATGGAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: ITVSLVLIAYMVRACYQLQKTQW*NIHGKP Trigger: GGGTTTTCCATGTATGTTGCACCATTGTGTTTTCTG...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGCAGAAGGATGACTTaGCAAAGGAAACACATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFKFITVSLVLIAYMVRACRRMT*QRKHIQ Trigger: CTGAATGTGTTTCCTTTGCCAAGTCATCCTTCTGCA...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGTACATGGAAAACCCATaGAAAGGGATGACACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKYMENP*KGMTPL Trigger: CAATGGTGTCATCCCTTTCCATGGGTTTTCCATGTA...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGTGCAGAAGGATGACTTaGCAAAGGAAACATTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKCRRMT*QRKHSV Trigger: AACTGAATGTTTCCTTTGCCAAGTCATCCTTCTGCA...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
||
| CDS-3UTR TCA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGTCACATCTTTATAAATaGGACTGTCCACCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKSHLYK*DCPPKG Trigger: ACCTTTTGGTGGACAGTCTCATTTATAAAGATGTGA...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CAA 90 bp | TCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCTTTCGTGCTAGTCCACCTGCTGTCTaGGTCCCCACCAAGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFHLLRSSFCSIAGLFRASPPAV*VPTKMA Trigger: GGCCATCTTGGTGGGGACCAAGACAGCAGGTGGACT...AGCACGAAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCTGCTGTGGGACTTCCTaGTCGGATGTACTGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLVLIAYMVRACYQLGICCGTS*SDVLLS Trigger: GCTCAGCAGTACATCCGACAAGGAAGTCCCACAGCA...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
||
| CDS-3UTR CAA 90 bp | CTCATCCGTTCCCATCTCATTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTACAAATTGGAGCCCTaGAGTTTCTGGACGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LIRSHLIPLIEKLFLLHSYKLEP*SFWTIW Trigger: CCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGTA...GCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGATGGGAACGGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAGGTCGTGCTGGATCACATTGGTCTTAAGCTGCTCATAATACAGGATTACAAATTGGAGCCCTaGAGTTTCTGGACGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HQKVVLDHIGLKLLIIQDYKLEP*SFWTIW Trigger: CCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGTA...ATCCTGTATTATGAGCAGCTTAAGACCAATGTGATCCAGCACGACCTTTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201958.4 |
||
| CDS-3UTR CAA 90 bp | TTCCACTTATTGAGAAGCTCTTTCTGCTCCATAGCTGGTCTCTTTCGTGCTAGTTACAAATTGGAGCCCTaGAGTTTCTGGACGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: FHLLRSSFCSIAGLFRASYKLEP*SFWTIW Trigger: CCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGTA...ACTAGCACGAAAGAGACCAGCTATGGAGCAGAAAGAGCTTCTCAATAAGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201958.4 ENSMUST00000202528.4 ENSMUST00000202599.4 |
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| CDS GCA 90 bp | TGCTTTCCTCATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAAAGGAAACACATTCAGTTCACTATA | + |
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Preference number: 5 (lower is better) Translates to: CFPHVHQRFFEMLRG*RRMTWQRKHIQFTI Trigger: TATAGTGAACTGAATGTGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATGAGGAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | GTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAGGGATCTACAAATTGGAGCCCTaGAGTTTCTGGACGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSLVLIAYMVRACYQLGIYKLEP*SFWTIW Trigger: CCAGATCGTCCAGAAACTCAAGGGCTCCAATTTGTA...GATCCCTAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAGTTTATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTACACCAAAGGTTCTTaGAGATGCTCAGGGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: FFKFITVSLVLIAYMVRAYTKGS*RCSGGA Trigger: TGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTA...GGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAATAAACTTGAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTTTGGGGAAGATACGTTaGAAGAAGAGTTTCAAACAG | + |
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Preference number: 5 (lower is better) Translates to: SLLTIISMQAQYLVCRVILGKIR*KKSFKQ Trigger: CTGTTTGAAACTCTTCTTCAAACGTATCTTCCCCAA...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | TCTCTCTTGACAATCATCAGCATGCAAGCGCAGTATTTGGTGTGTAGGGTTATTTCCTTAATATCTTCTTaGAGTGATTCGAGTCTGATC | + |
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Preference number: 5 (lower is better) Translates to: SLLTIISMQAQYLVCRVISLISS*SDSSLI Trigger: GATCAGACTCGAATCACTCAAAGAAGATATTAAGGA...AATAACCCTACACACCAAATACTGCGCTTGCATGCTGATGATTGTCAAGAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037337.10 ENSMUST00000201958.4 |
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| CDS-3UTR CAA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGATCTCATTCCACTTATaGAGAAGCTCTTTCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKISFHL*RSSFCS Trigger: GGAGCAGAAAGAGCTTCTCAATAAGTGGAATGAGAT...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGAAGTTCAGGAGGCACTaGTGTAGAATCATCTATTCC | + |
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Preference number: 5 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKKFRRH*CRIIYS Trigger: GGAATAGATGATTCTACACAAGTGCCTCCTGAACTT...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | ATTACAGTGTCGTTAGTTCTTATTGCATATATGGTACGAGCCTGTTACCAGTTAAGTAATCATCATTGCTaGCTGTCAGCTTCACATCTT | + |
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Preference number: 5 (lower is better) Translates to: ITVSLVLIAYMVRACYQLSNHHC*LSASHL Trigger: AAGATGTGAAGCTGACAGCAAGCAATGATGATTACT...TAACTGGTAACAGGCTCGTACCATATATGCAATAAGAACTAACGACACTGTAAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS-3UTR CAA 90 bp | TATTATCTAGGGAGAAGTTTACAAACTGACAAGAAGCTGTGTTACTTCTTCAAGAGTATTTCCAGAGAGTaGTATCCTAGAATTCTATCC | + |
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Preference number: 5 (lower is better) Translates to: YYLGRSLQTDKKLCYFFKSISRE*YPRILS Trigger: GGATAGAATTCTAGGATACAACTCTCTGGAAATACT...CTTGAAGAAGTAACACAGCTTCTTGTCAGTTTGTAAACTTCTCCCTAGATAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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| CDS CAA 72 bp | CTATTACTCCAACACTGTGCCAGTCCACCTGCTGTCTaGGTCCCCACCAAGATGGCCATGAACTCGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLLQHCASPPAV*VPTKMAMNSPS Trigger: CGAGGGCGAGTTCATGGCCATCTTGGTGGGGACCAAGACAGCAGGTGGACTGGCACAGTGTTGGAGTAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202599.4 |
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| CDS GCA 72 bp | CATGTACACCAAAGGTTCTTTGAGATGCTCAGGGGGTaGAGAAGGATGACTTGGCAAAGGAAACACATTCAG | + |
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Preference number: 6 (lower is better) Translates to: HVHQRFFEMLRG*RRMTWQRKHIQ Trigger: CTGAATGTGTTTCCTTTGCCAAGTCATCCTTCTGCACCCCCTGAGCATCTCAAAGAACCTTTGGTGTACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037337.10 |
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