RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029192

Ensembl transcript IDs: ENSMUST00000031094.15, ENSMUST00000124036.8, ENSMUST00000126077.8, ENSMUST00000130417.8, ENSMUST00000136189.8, ENSMUST00000136490.8, ENSMUST00000139182.8, ENSMUST00000140179.3, ENSMUST00000140607.8, ENSMUST00000141017.2, ENSMUST00000144997.2, ENSMUST00000146430.8, ENSMUST00000150813.2, ENSMUST00000171385.8, ENSMUST00000173532.2, ENSMUST00000173757.2

Found 747 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAAGGGCTCCCCCACAGCTCTCAGAAACACAGAGATGGAAAGGGTaGGTTCTGGGGGTGGGAGGTACGGCTGTGGAGGGCTGTGGACTA +
Preference number: 1 (lower is better)
Translates to: SRAPPQLSETQRWKG*VLGVGGTAVEGCGL
Trigger: TAGTCCACAGCCCTCCACAGCCGTACCTCCCACCCCCAGAACTCACCCTTTCCATCTCTGTGTTTCTGAGAGCTGTGGGGGAGCCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp TACACTGGACGGTCACCAACAGGCATAGCAGATGAAGGGAACCCATaGAAACACAGCGCCATGAGGCTGACCCCAAGCCTCCCTGCCACA +
Preference number: 1 (lower is better)
Translates to: YTGRSPTGIADEGNP*KHSAMRLTPSLPAT
Trigger: TGTGGCAGGGAGGCTTGGGGTCAGCCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGACCGTCCAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp CCGGCTTTGCATCTGGACTGTGGAGATAGCTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAGCCTGGTCAGAAACTGGGCACTGTG +
Preference number: 1 (lower is better)
Translates to: PALHLDCGDSCKHFI*GQVLRQPGQKLGTV
Trigger: CACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCAGCTATCTCCACAGTCCAGATGCAAAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 90 bp CACAGCTCTCAGAAACACAGAGATGGAAAGGGTGAGTTCTGGGGGTaGGAGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGG +
Preference number: 1 (lower is better)
Translates to: HSSQKHRDGKGEFWG*EVRLWRAVDYRPHR
Trigger: CCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCTCCCACCCCCAGAACTCACCCTTTCCATCTCTGTGTTTCTGAGAGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp GAGGGATGGGCTTCCTTTCTCCATCTCCCGGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCATTTCTTGTTCCGGCTTTGCATCTG +
Preference number: 1 (lower is better)
Translates to: EGWASFLHLPAVFLQ*RQHLCPFLVPALHL
Trigger: CAGATGCAAAGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAGATGGAGAAAGGAAGCCCATCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR GCA 90 bp TGTCTGAGGGATGGGCTTCCTTTCTCCATCTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGTGCCCATTTCTTGTTCCGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: CLRDGLPFSISRLSF*SADSTCAHFLFRLC
Trigger: GCAAAGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAGATGGAGAAAGGAAGCCCATCCCTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 90 bp CACAGAGATGGAAAGGGTGAGTTCTGGGGGTGGGAGGTACGGCTGTaGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAAT +
Preference number: 1 (lower is better)
Translates to: HRDGKGEFWGWEVRL*RAVDYRPHRDLLEN
Trigger: ATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCTCCCACCCCCAGAACTCACCCTTTCCATCTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp GGGCCTGGGCTACATTCAGTGTCTGATGTCAGGAATGGCTGGGTTTaGAGGCCATGGATGGCTGTGAAGACATCCTCCTCCAAGAGGTCA +
Preference number: 1 (lower is better)
Translates to: GPGLHSVSDVRNGWV*RPWMAVKTSSSKRS
Trigger: TGACCTCTTGGAGGAGGATGTCTTCACAGCCATCCATGGCCTCCAAACCCAGCCATTCCTGACATCAGACACTGAATGTAGCCCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp TCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCATCTTATaGCCAGCTGGGCCTGGGCTACATTCAGTGTCTGATGTCAGGAAT +
Preference number: 1 (lower is better)
Translates to: SARKDSRQGWVVRIL*PAGPGLHSVSDVRN
Trigger: ATTCCTGACATCAGACACTGAATGTAGCCCAGGCCCAGCTGGCCATAAGATGCGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 90 bp CGGGCAGGTCCTCAGGCAGCCTGGTCAGAAACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGC +
Preference number: 1 (lower is better)
Translates to: RAGPQAAWSETGHCG*SPSWSGYLQKASGC
Trigger: GCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACCTGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR GCA 90 bp ACAGCGTTCCCAATGCTCTCTTCAACCTTGCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCTTCTTTAAGCTCTCGTTTCTTGGCC +
Preference number: 1 (lower is better)
Translates to: TAFPMLSSTLHLSSS*FLRRWASLSSRFLA
Trigger: GGCCAAGAAACGAGAGCTTAAAGAAGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 90 bp TACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTaGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: YGCGGLWTTDHTGIC*KIHSQPWPSCTLRN
Trigger: GTTCCTGAGGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp CTCTCTTCAACCTTGCACCTTTCCTCCAGCTGCTTCCTCCGACGCTaGGCTTCTTTAAGCTCTCGTTTCTTGGCCTGCAGCACCATCTCT +
Preference number: 1 (lower is better)
Translates to: LSSTLHLSSSCFLRR*ASLSSRFLACSTIS
Trigger: AGAGATGGTGCTGCAGGCCAAGAAACGAGAGCTTAAAGAAGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 90 bp AGTGCAGACAGCACCTGTGCCCATTTCTTGTTCCGGCTTTGCATCTaGACTGTGGAGATAGCTGCAAACACTTCATCTGCGGGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: SADSTCAHFLFRLCI*TVEIAANTSSAGRS
Trigger: GGACCTGCCCGCAGATGAAGTGTTTGCAGCTATCTCCACAGTCCAGATGCAAAGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR GCA 90 bp GCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATaGCCAGCCTCCCCAGAAGCAAGCAGGTTAAAGAGGAGCAAACTC +
Preference number: 1 (lower is better)
Translates to: ARKPSPTQWCFQRLP*PASPEASRLKRSKL
Trigger: GAGTTTGCTCCTCTTTAACCTGCTTGCTTCTGGGGAGGCTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp GAAAGGGTGAGTTCTGGGGGTGGGAGGTACGGCTGTGGAGGGCTGTaGACTACAGACCACACAGGGATTTGCTGGAAAATACATTCTCAA +
Preference number: 1 (lower is better)
Translates to: ERVSSGGGRYGCGGL*TTDHTGICWKIHSQ
Trigger: TTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCTCCCACCCCCAGAACTCACCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 90 bp TGGGTCAATGTCAGCACAAAAGTCAGGTGCGTTCCCAGGAGCCTATaGGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACA +
Preference number: 1 (lower is better)
Translates to: WVNVSTKVRCVPRSL*DSPATTLQGPIFLT
Trigger: TGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCTCATAGGCTCCTGGGAACGCACCTGACTTTTGTGCTGACATTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 90 bp TGTCTGATGTCAGGAATGGCTGGGTTTGGAGGCCATGGATGGCTGTaGAGACATCCTCCTCCAAGAGGTCAGACATCAGCCTTTCACACT +
Preference number: 1 (lower is better)
Translates to: CLMSGMAGFGGHGWL*RHPPPRGQTSAFHT
Trigger: AGTGTGAAAGGCTGATGTCTGACCTCTTGGAGGAGGATGTCTTCACAGCCATCCATGGCCTCCAAACCCAGCCATTCCTGACATCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp CAAGAGGTCAGACATCAGCCTTTCACACTAAGGCAGAGAGCTCCATaGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAA +
Preference number: 1 (lower is better)
Translates to: QEVRHQPFTLRQRAP*RVLCGLPEEVTDYK
Trigger: TTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAGCTCTCTGCCTTAGTGTGAAAGGCTGATGTCTGACCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp TTCATACTGCTGTCTGTGCTTTTGAGCTTCTTCAGCTGGCTTGGCTaGGAGATTTCCCCATGGCAGACAGACAGAGGCTCTTCCTCAGAC +
Preference number: 1 (lower is better)
Translates to: FILLSVLLSFFSWLG*EISPWQTDRGSSSD
Trigger: GTCTGAGGAAGAGCCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 90 bp TCTCTTCATACTGCTGTCTGTGCTTTTGAGCTTCTTCAGCTGGCTTaGCTGGGAGATTTCCCCATGGCAGACAGACAGAGGCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: SLHTAVCAFELLQLA*LGDFPMADRQRLFL
Trigger: GAGGAAGAGCCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 90 bp GCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTGAAAATCCTGTaGAAGCCAGAGGCATCAGGTCCCCATGGAGCTGGAGTTATAAGT +
Preference number: 1 (lower is better)
Translates to: AKSKGRDLLYKVKIL*KPEASGPHGAGVIS
Trigger: ACTTATAACTCCAGCTCCATGGGGACCTGATGCCTCTGGCTTCCACAGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
3UTR CCA 90 bp CCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGCCATGTTGAG +
Preference number: 1 (lower is better)
Translates to: PTSASEIQHGKSPCS*QAGFSLKAHRCHVE
Trigger: CTCAACATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR TCA 90 bp CACACTAAGGCAGAGAGCTCCATGGAGGGTGCTCTGTGGCCTCCCTaGAGAAGTCACAGACTACAAATGAGACTCCAAGAAAAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: HTKAESSMEGALWPP*RSHRLQMRLQEKRK
Trigger: TTTCCTCTTTTCTTGGAGTCTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAGCTCTCTGCCTTAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 90 bp AACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTaGACCCATGTAGAAAATGCAGTGGCTAGCCATGACCAATGCCAG +
Preference number: 1 (lower is better)
Translates to: NCCWNKGSRRQPALS*THVENAVASHDQCQ
Trigger: CTGGCATTGGTCATGGCTAGCCACTGCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR TCA 90 bp ACAGACCTCTGCAGGGTCAGTTTCCAGTTTGCCAAAACAGGAGTATaGGAGAAGTATGAGAGACGCCCTCAAAGTAGAGGAACGTGGAAC +
Preference number: 1 (lower is better)
Translates to: TDLCRVSFQFAKTGV*EKYERRPQSRGTWN
Trigger: GTTCCACGTTCCTCTACTTTGAGGGCGTCTCTCATACTTCTCTCATACTCCTGTTTTGGCAAACTGGAAACTGACCCTGCAGAGGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp CACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTaGACCCTCAGGAACCAGAATGCCAATGGATATCAGAAGGTAACC +
Preference number: 1 (lower is better)
Translates to: HTGICWKIHSQPWPS*TLRNQNANGYQKVT
Trigger: GGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTGAGGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp GTCAGTGCTCGGCTGGCATGGAGTCTTGTTGGAGAACTTCATGCATaGCCACAGATTTATGTCAAACAAGAAAAGGTAAGGGCTGGGTTG +
Preference number: 1 (lower is better)
Translates to: VSARLAWSLVGELHA*PQIYVKQEKVRAGL
Trigger: CAACCCAGCCCTTACCTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp TGCAGTCAGTGCTCGGCTGGCATGGAGTCTTGTTGGAGAACTTCATaGATGCCCACAGATTTATGTCAAACAAGAAAAGGTAAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: CSQCSAGMESCWRTS*MPTDLCQTRKGKGW
Trigger: CCAGCCCTTACCTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCACTGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 90 bp TCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGA +
Preference number: 1 (lower is better)
Translates to: SWSGYLQKASGCPEL*GREIPLHLDRIRPR
Trigger: TCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 90 bp ACTACAGACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTaGCCTTCCTGCACCCTCAGGAACCAGAATGCCAATGGATATCAG +
Preference number: 1 (lower is better)
Translates to: TTDHTGICWKIHSQP*PSCTLRNQNANGYQ
Trigger: CTGATATCCATTGGCATTCTGGTTCCTGAGGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp CACAGACTACAAATGAGACTCCAAGAAAAGAGGAAAGTGAGAGCATaGGGTGAAGAGCACAAATACGACAGCCCGCAGATACACTGGACG +
Preference number: 1 (lower is better)
Translates to: HRLQMRLQEKRKVRA*GEEHKYDSPQIHWT
Trigger: CGTCCAGTGTATCTGCGGGCTGTCGTATTTGTGCTCTTCACCCCATGCTCTCACTTTCCTCTTTTCTTGGAGTCTCATTTGTAGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp ATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATaGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: ILFCCKANFSIRNPT*KEPLFLAGRLQSES
Trigger: GCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR TCA 90 bp TGCCCACAGATTTATGTCAAACAAGAAAAGGTAAGGGCTGGGTTGTaGACACAGAGAATCCCACAATGGCATTCACAACAAGGTGCCCAA +
Preference number: 1 (lower is better)
Translates to: CPQIYVKQEKVRAGL*TQRIPQWHSQQGAQ
Trigger: TTGGGCACCTTGTTGTGAATGCCATTGTGGGATTCTCTGTGTTCACAACCCAGCCCTTACCTTTTCTTGTTTGACATAAATCTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 90 bp TCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGGTAAGGGCTaGGTTGTGAACACAGAGAATCCCACAATGGCATTCACAACAAGG +
Preference number: 1 (lower is better)
Translates to: SCMPTDLCQTRKGKG*VVNTENPTMAFTTR
Trigger: CCTTGTTGTGAATGCCATTGTGGGATTCTCTGTGTTCACAACCCAGCCCTTACCTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAGGTGTTTTCAGAGGCTaGCATGCCCAGCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKGVFRG*HAQPPQ
Trigger: CTGGGGAGGCTGGGCATGGCAGCCTCTGAAAACACC...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAACATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGAGCTCCATGGAGGGTaGTCTGTGGCCTCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAELHGG*SVASLK
Trigger: CTTCAGGGAGGCCACAGAGCACCCTCCATGGAGCTC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CGACAGAATACGTCCCAGATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGGTGAACCACCTGATGTaGGTGCTGGGAACCAAACGT +
Preference number: 2 (lower is better)
Translates to: RQNTSQMRQAKSKGRDLLVNHLM*VLGTKR
Trigger: ACGTTTGGTTCCCAGCACCCACATCAGGTGGTTCAC...CAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
3UTR-3UTR TCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATTGAGCTCTGCTTCTTaGCCGGTGGGAGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLLSSAS*PVGVSY
Trigger: GTAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATTGAGCTCTGCTTCTTaGCCGGTGGGAGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKLSSAS*PVGVSY
Trigger: GTAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACTTGAGCTCTGCTTCTTaGCCGGTGGGAGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNLSSAS*PVGVSY
Trigger: GTAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAA...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACTGCCATGTTGAGCTCTaGTTCTTGACCGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNCHVEL*FLTGGS
Trigger: ACTCCCACCGGTCAAGAAGCAGAGCTCAACATGGCA...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATGCCATGTTGAGCTCTaGTTCTTGACCGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKCHVEL*FLTGGS
Trigger: ACTCCCACCGGTCAAGAAGCAGAGCTCAACATGGCA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGACATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGCTGAGAGGAATCAGCTaGAATGGGGAAGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LHGGCSVASLKKSQTTNELRGIS*NGEGLR
Trigger: CCTGAGCCCTTCCCCATTGCAGCTGATTCCTCTCAG...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEKSPCS*QAGFSL
Trigger: CAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTT...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATCAGGACACAGAGGGTaGAAGGCTGCCTTACTCTTG +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKSGHRG*KAALLL
Trigger: CAAGAGTAAGGCAGCCTTCCACCCTCTGTGTCCTGA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 90 bp TCATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGCTTCCTCCGACGCTGGGCTTCTTTA +
Preference number: 2 (lower is better)
Translates to: SLFQVRTAFPMLSST*HLSSSCFLRRWASL
Trigger: TAAAGAAGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CAA 90 bp TCCCGGCTGTCTTTCTGCAGTGCAGACAGCACCTGTGCCCATTTCTaGTTCCGGCTTTGCATCTGGACTGTGGAGATAGCTGCAAACACT +
Preference number: 2 (lower is better)
Translates to: SRLSFCSADSTCAHF*FRLCIWTVEIAANT
Trigger: AGTGTTTGCAGCTATCTCCACAGTCCAGATGCAAAGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATTTGAGCTCTGCTTCTTaGCCGGTGGGAGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDLSSAS*PVGVSY
Trigger: GTAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAA...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGTTCCCAGGAGCCTATaGGATTCACCAGCAACTACC +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAVPRSL*DSPATT
Trigger: GGTAGTTGCTGGTGAATCTCATAGGCTCCTGGGAAC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGGTTCCCAGGAGCCTATaGGATTCACCAGCAACTACC +
Preference number: 2 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRVPRSL*DSPATT
Trigger: GGTAGTTGCTGGTGAATCTCATAGGCTCCTGGGAAC...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGCTCTGTGGCCTCCCTaGAGAAGTCACAGACTACAA +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAALWPP*RSHRLQ
Trigger: TTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGTGCCATGTTGAGCTCTaGTTCTTGACCGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRCHVEL*FLTGGS
Trigger: ACTCCCACCGGTCAAGAAGCAGAGCTCAACATGGCA...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCCTGAGAGGAATCAGCTaGAATGGGGAAGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPLRGIS*NGEGLR
Trigger: CCTGAGCCCTTCCCCATTGCAGCTGATTCCTCTCAG...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp TCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCGGAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 2 (lower is better)
Translates to: SILVRISSKSFRMPRAVRRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...CCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGAAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRKSPCS*QAGFSL
Trigger: CAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTT...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGTCCCTTCACAGCATATaGCTTCCCTGCTCCAACCAC +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSASLHSI*LPCSNH
Trigger: GTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGA...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAACAGGGGAGAATCACTaGCACTTAGAAGGGATCCAG +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKTGENH*HLEGIQ
Trigger: CTGGATCCCTTCTAAGTGCCAGTGATTCTCCCCTGT...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGAGGAATCAGCTGCAATaGGGAAGGGCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSARNQLQ*GRAQDT
Trigger: TGTGTCCTGAGCCCTTCCCCATTGCAGCTGATTCCT...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGAGGAATCAGCTGCAATaGGGAAGGGCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRRNQLQ*GRAQDT
Trigger: TGTGTCCTGAGCCCTTCCCCATTGCAGCTGATTCCT...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 90 bp TTTCTTGGCCTGCAGCACCATCTCTTCATACTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTTGGCTGGGAGATTTCCCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: FLGLQHHLFILLSVL*SFFSWLGWEISPWQ
Trigger: CTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGCTGCAGGCCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR GCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGCACCAGCAACTACCCTaGAAGGGCCCATCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQHQQLP*KGPSSL
Trigger: TAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTG...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGACAGGGGAGAATCACTaGCACTTAGAAGGGATCCAG +
Preference number: 2 (lower is better)
Translates to: LHGGCSVASLKKSQTTNETGENH*HLEGIQ
Trigger: CTGGATCCCTTCTAAGTGCCAGTGATTCTCCCCTGT...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCAGGAATCAGCTGCAATaGGGAAGGGCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPRNQLQ*GRAQDT
Trigger: TGTGTCCTGAGCCCTTCCCCATTGCAGCTGATTCCT...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAAGGCAGAGAGCTCCATaGAGGGTGCTCTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVRQRAP*RVLCGL
Trigger: GAGGCCACAGAGCACCCTCCATGGAGCTCTCTGCCT...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp TGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: WALWMKSILVRISSKSFRRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...CCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGAACAGGCATAGCAGATaGAGGGAACCCATGCAAACA +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSANRHSR*REPMQT
Trigger: TGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTT...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGAAGAAAAGAGGAAAGTaGGAGCATGGGGTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAKKRGK*EHGVKS
Trigger: GCTCTTCACCCCATGCTCTCACTTTCCTCTTTTCTT...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp ATCTCATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTTGCACCTTCTTCAGCTGGCTTaGCTGGGAGATTTCCCCATG +
Preference number: 2 (lower is better)
Translates to: ISLFQVRTAFPMLSSTLHLLQLA*LGDFPM
Trigger: CATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAG...GTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR TCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTACAACCCTGGCCTTCCTaGACCCTCAGGAACCAGAAT +
Preference number: 2 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVQPWPS*TLRNQN
Trigger: ATTCTGGTTCCTGAGGGTGCAGGAAGGCCAGGGTTG...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLKSPCS*QAGFSL
Trigger: CAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTT...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTTCCCTTCACAGCATATaGCTTCCCTGCTCCAACCAC +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSSLHSI*LPCSNH
Trigger: GTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGA...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAAGGAATGGCTGGGTTTaGAGGCCATGGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVRNGWV*RPWMAV
Trigger: CACAGCCATCCATGGCCTCCAAACCCAGCCATTCCT...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTGATGTCAGGAATGGCTaGGTTTGGAGGCCATGGATG +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSDVRNG*VWRPWM
Trigger: CATCCATGGCCTCCAAACCCAGCCATTCCTGACATC...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCAAGAAGGTGAAAATCCTGTaGAAGCCAGAGGCATCAGGT +
Preference number: 2 (lower is better)
Translates to: KRNSSPSRQNTSQMRQAKKVKIL*KPEASG
Trigger: ACCTGATGCCTCTGGCTTCCACAGGATTTTCACCTT...CTTGGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
3UTR-3UTR TCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: QEPECQWISEGNQFPQILRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCTGCAGAGTAGGATCCTaGTATGAACTCTCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCCRVGS*YELSAF
Trigger: GAAGGCTGAGAGTTCATATCAGGATCCTACTCTGCA...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTAGTGAGAGCATGGGGTaGAGAGCACAAATACGACAG +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSSESMG*RAQIRQ
Trigger: CTGTCGTATTTGTGCTCTTCACCCCATGCTCTCACT...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAGATGAAGGGAACCCATaGAAACACAGCGCCATGAGG +
Preference number: 2 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVDEGNP*KHSAMR
Trigger: CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATC...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp ATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTTGCACCTTTCTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 2 (lower is better)
Translates to: IVPGEDSVPNALFNLAPFSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...GAAAGGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR CCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKKSPCS*QAGFSL
Trigger: CAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTT...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQKSPCS*QAGFSL
Trigger: CAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTT...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAAGGAATCAGCTGCAATaGGGAAGGGCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVRNQLQ*GRAQDT
Trigger: TGTGTCCTGAGCCCTTCCCCATTGCAGCTGATTCCT...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACGGCCAAAAACAACTCTaGGGTTTCCTAATAACATTT +
Preference number: 2 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNGQKQL*GFLITF
Trigger: AAATGTTATTAGGAAACCTCAGAGTTGTTTTTGGCC...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGCACCAGCAACTACCCTaGAAGGGCCCATCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: QEPECQWISEGNQFPQILHQQLP*KGPSSL
Trigger: TAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTG...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAGTACCTTCCAGTAGTTaGCATAATAGCATCACAATT +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKVPSSS*HNSITI
Trigger: AATTGTGATGCTATTATGCCAACTACTGGAAGGTAC...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATTTCTTACAAGCATATaGGCCAAAAACAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKFLTSI*AKNNSE
Trigger: CTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGCACACCTTTCATCTCTaGAAAGATTATCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKHTFHL*KDYLSN
Trigger: GTTACTGAGATAATCTTTCCAGAGATGAAAGGTGTG...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGTCAGGACACAGAGGGTaGAAGGCTGCCTTACTCTTG +
Preference number: 2 (lower is better)
Translates to: QEPECQWISEGNQFPQILSGHRG*KAALLL
Trigger: CAAGAGTAAGGCAGCCTTCCACCCTCTGTGTCCTGA...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGAGGAATCAGCTGCAATaGGGAAGGGCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: QEPECQWISEGNQFPQILRNQLQ*GRAQDT
Trigger: TGTGTCCTGAGCCCTTCCCCATTGCAGCTGATTCCT...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCCAGCCTGCCCTTTCTTaGACCCATGTAGAAAATGCA +
Preference number: 2 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFQPALS*THVENA
Trigger: TGCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTG...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGGGCCAAAAACAACTCTaGGGTTTCCTAATAACATTT +
Preference number: 2 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEGQKQL*GFLITF
Trigger: AAATGTTATTAGGAAACCTCAGAGTTGTTTTTGGCC...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKHDQCQ*MGPLSC
Trigger: GCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGATTTCTCATGCATCCTaGCTAAGAAAGATTGTAATG +
Preference number: 2 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKISHAS*LRKIVM
Trigger: CATTACAATCTTTCTTAGCCAGGATGCATGAGAAAT...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGATTTCTCATGCATCCTaGCTAAGAAAGATTGTAATG +
Preference number: 2 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLISHAS*LRKIVM
Trigger: CATTACAATCTTTCTTAGCCAGGATGCATGAGAAAT...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGTTTCTTACAAGCATATaGGCCAAAAACAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAFLTSI*AKNNSE
Trigger: CTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAA...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCACACCTTTCATCTCTaGAAAGATTATCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAHTFHL*KDYLSN
Trigger: GTTACTGAGATAATCTTTCCAGAGATGAAAGGTGTG...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTGTCACAGACTACAAATaGGACTCCAAGAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSVTDYK*DSKKRG
Trigger: TCCTCTTTTCTTGGAGTCTCATTTGTAGTCTGTGAC...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGGGCCATGGATGGCTGTaGAGACATCCTCCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKGHGWL*RHPPPR
Trigger: TCTTGGAGGAGGATGTCTTCACAGCCATCCATGGCC...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTGCCATGTTGAGCTCTaGTTCTTGACCGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: SCLRLNLDVILFCCKANFCHVEL*FLTGGS
Trigger: ACTCCCACCGGTCAAGAAGCAGAGCTCAACATGGCA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTGCCATGTTGAGCTCTaGTTCTTGACCGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: NLINCCWNKGSRRQPALSCHVEL*FLTGGS
Trigger: ACTCCCACCGGTCAAGAAGCAGAGCTCAACATGGCA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATTTCTTACAAGCATATaGGCCAAAAACAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRFLTSI*AKNNSE
Trigger: CTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGAGGAATGGCTGGGTTTaGAGGCCATGGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKRNGWV*RPWMAV
Trigger: CACAGCCATCCATGGCCTCCAAACCCAGCCATTCCT...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 90 bp CAGAGAATCCCACAATGGCATTCACAACAAGGTGCCCAAGTCCCCTaGTCACAACACTTTCTGTATGACGTAAGGAATGTCTTTATGTAC +
Preference number: 2 (lower is better)
Translates to: QRIPQWHSQQGAQVP*SQHFLYDVRNVFMY
Trigger: GTACATAAAGACATTCCTTACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATGCCATTGTGGGATTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTTGAGCTCTGCTTCTTaGCCGGTGGGAGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKLSSAS*PVGVSY
Trigger: GTAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAAGGCAGGCTTCAGTCTaGAAGCACACAGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: VILFCCKANFSIRNPTWKRQASV*KHTGAM
Trigger: CATGGCACCTGTGTGCTTTCAGACTGAAGCCTGCCT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGATTTCTCATGCATCCTaGCTAAGAAAGATTGTAATG +
Preference number: 2 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQISHAS*LRKIVM
Trigger: CATTACAATCTTTCTTAGCCAGGATGCATGAGAAAT...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 90 bp TCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTaGATAGGGAGATTTAAAACACACCTTTCATCTCTGGAAAGATTA +
Preference number: 2 (lower is better)
Translates to: SPATTLQGPIFLTMS*IGRFKTHLSSLERL
Trigger: TAATCTTTCCAGAGATGAAAGGTGTGTTTTAAATCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATGTTCCCAGGAGCCTATaGGATTCACCAGCAACTACC +
Preference number: 2 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNVPRSL*DSPATT
Trigger: GGTAGTTGCTGGTGAATCTCATAGGCTCCTGGGAAC...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGTACCTTCCAGTAGTTaGCATAATAGCATCACAATT +
Preference number: 2 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDVPSSS*HNSITI
Trigger: AATTGTGATGCTATTATGCCAACTACTGGAAGGTAC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTTTTCTTACAAGCATATaGGCCAAAAACAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSFLTSI*AKNNSE
Trigger: CTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAA...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTTATAAAGACCTTGTTTaGACTAGAGATGCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSYKDLV*TRDAVS
Trigger: ACTGACTGCATCTCTAGTCCAAACAAGGTCTTTATA...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCGGCCAAAAACAACTCTaGGGTTTCCTAATAACATTT +
Preference number: 2 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFGQKQL*GFLITF
Trigger: AAATGTTATTAGGAAACCTCAGAGTTGTTTTTGGCC...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR TCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGAACAGGCATAGCAGATaGAGGGAACCCATGCAAACA +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKNRHSR*REPMQT
Trigger: TGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTT...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCGTACCTTCCAGTAGTTaGCATAATAGCATCACAATT +
Preference number: 2 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFVPSSS*HNSITI
Trigger: AATTGTGATGCTATTATGCCAACTACTGGAAGGTAC...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTATTTCTCATGCATCCTaGCTAAGAAAGATTGTAATG +
Preference number: 2 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSISHAS*LRKIVM
Trigger: CATTACAATCTTTCTTAGCCAGGATGCATGAGAAAT...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTCACACCTTTCATCTCTaGAAAGATTATCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPHTFHL*KDYLSN
Trigger: GTTACTGAGATAATCTTTCCAGAGATGAAAGGTGTG...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTAATTAACTGCTGCTaGAATAAAGGTTCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFLINCC*NKGSRR
Trigger: TCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCATTTCTCATGCATCCTaGCTAAGAAAGATTGTAATG +
Preference number: 2 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFISHAS*LRKIVM
Trigger: CATTACAATCTTTCTTAGCCAGGATGCATGAGAAAT...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGGACCACACAGGGATTTaGTGGAAAATACATTCTCAA +
Preference number: 2 (lower is better)
Translates to: SLVGELHACPQIYVKQEKDHTGI*WKIHSQ
Trigger: TTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTC...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGGCCAAAAACAACTCTaGGGTTTCCTAATAACATTT +
Preference number: 2 (lower is better)
Translates to: VILFCCKANFSIRNPTWKGQKQL*GFLITF
Trigger: AAATGTTATTAGGAAACCTCAGAGTTGTTTTTGGCC...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATGTACCTTCCAGTAGTTaGCATAATAGCATCACAATT +
Preference number: 2 (lower is better)
Translates to: LNLDVILFCCKANFSIRNVPSSS*HNSITI
Trigger: AATTGTGATGCTATTATGCCAACTACTGGAAGGTAC...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR GCA 72 bp CGGTCACCAACAGGCATAGCAGATGAAGGGAACCCATaGAAACACAGCGCCATGAGGCTGACCCCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: RSPTGIADEGNP*KHSAMRLTPSL
Trigger: GAGGCTTGGGGTCAGCCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp CAGAAACACAGAGATGGAAAGGGTGAGTTCTGGGGGTaGGAGGTACGGCTGTGGAGGGCTGTGGACTACAGA +
Preference number: 3 (lower is better)
Translates to: QKHRDGKGEFWG*EVRLWRAVDYR
Trigger: TCTGTAGTCCACAGCCCTCCACAGCCGTACCTCCCACCCCCAGAACTCACCCTTTCCATCTCTGTGTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp AAGGACAGCAGACAGGGCTGGGTAGTGCGCATCTTATaGCCAGCTGGGCCTGGGCTACATTCAGTGTCTGAT +
Preference number: 3 (lower is better)
Translates to: KDSRQGWVVRIL*PAGPGLHSVSD
Trigger: ATCAGACACTGAATGTAGCCCAGGCCCAGCTGGCCATAAGATGCGCACTACCCAGCCCTGTCTGCTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp ACCTTGCACCTTTCCTCCAGCTGCTTCCTCCGACGCTaGGCTTCTTTAAGCTCTCGTTTCTTGGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: TLHLSSSCFLRR*ASLSSRFLACS
Trigger: GCTGCAGGCCAAGAAACGAGAGCTTAAAGAAGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR CAA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CAA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp AGGCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTaGAAATCCTGTGGAAGCCAGAGGCATCAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: RPSPRAGTYCTR*KSCGSQRHQVP
Trigger: GGGGACCTGATGCCTCTGGCTTCCACAGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
3UTR GCA 72 bp AGGAACTCTCCTGCAAGCTCCCTCCAGAGTGCCAGCTaGCCAGCACCCTCAAGTTTGGGACTGAAAGTCAAT +
Preference number: 3 (lower is better)
Translates to: RNSPASSLQSAS*PAPSSLGLKVN
Trigger: ATTGACTTTCAGTCCCAAACTTGAGGGTGCTGGGCAGCTGGCACTCTGGAGGGAGCTTGCAGGAGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp CATCTGGACTGTGGAGATAGCTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAGCCTGGTCAGAAACTG +
Preference number: 3 (lower is better)
Translates to: HLDCGDSCKHFI*GQVLRQPGQKL
Trigger: CAGTTTCTGACCAGGCTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCAGCTATCTCCACAGTCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR GCA 72 bp CTTGTTCCGGCTTTGCATCTGGACTGTGGAGATAGCTaGAAACACTTCATCTGCGGGCAGGTCCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LVPALHLDCGDS*KHFICGQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCAGCTATCTCCACAGTCCAGATGCAAAGCCGGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 72 bp CTGCCCAGCACCCTCAAGTTTGGGACTGAAAGTCAATaGCAATTGAGGTGGGAGGTACAGACCTCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: LPSTLKFGTESQ*QLRWEVQTSAG
Trigger: CCCTGCAGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAGGGTGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGTTGAGCTCTGCTTCTaGACCGGTGGGAGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVVELCF*TGGSEL
Trigger: TAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAAC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
ENSMUST00000173757.2
3UTR TCA 72 bp CAGATACACTGGACGGTCACCAACAGGCATAGCAGATaGAGGGAACCCATGCAAACACAGCGCCATGAGGCT +
Preference number: 3 (lower is better)
Translates to: QIHWTVTNRHSR*REPMQTQRHEA
Trigger: AGCCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGACCGTCCAGTGTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp AGAGTGCCAGCTGCCCAGCACCCTCAAGTTTGGGACTaGAAGTCAATGGCAATTGAGGTGGGAGGTACAGAC +
Preference number: 3 (lower is better)
Translates to: RVPAAQHPQVWD*KSMAIEVGGTD
Trigger: GTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAGGGTGCTGGGCAGCTGGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp CCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATaGCCAGCCTCCCCAGAAGCAAGCAGGTTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: PSPTQWCFQRLP*PASPEASRLKR
Trigger: CCTCTTTAACCTGCTTGCTTCTGGGGAGGCTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp AATGGGGAAGGGCTCAGGACACAGAGGGTGGAAGGCTaGCTTACTCTTGTCCTTATAGCAGTGCGTGGAACT +
Preference number: 3 (lower is better)
Translates to: NGEGLRTQRVEG*LTLVLIAVRGT
Trigger: AGTTCCACGCACTGCTATAAGGACAAGAGTAAGGCAGCCTTCCACCCTCTGTGTCCTGAGCCCTTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp GAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGT +
Preference number: 3 (lower is better)
Translates to: EIPLHLDRIRPR*GRPSPRAGTYC
Trigger: ACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
3UTR GCA 72 bp GATGGGCTTCCTTTCTCCATCTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGTGCCCATTTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: DGLPFSISRLSF*SADSTCAHFLF
Trigger: GAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAGATGGAGAAAGGAAGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 72 bp GGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTaGAAAATACATTCTCAACCCTGGCCTTCCTGCACC +
Preference number: 3 (lower is better)
Translates to: GGLWTTDHTGIC*KIHSQPWPSCT
Trigger: GGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp CTGTCTGTGCTTTTGAGCTTCTTCAGCTGGCTTGGCTaGGAGATTTCCCCATGGCAGACAGACAGAGGCTCT +
Preference number: 3 (lower is better)
Translates to: LSVLLSFFSWLG*EISPWQTDRGS
Trigger: AGAGCCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 72 bp ACTGCTGTCTGTGCTTTTGAGCTTCTTCAGCTGGCTTaGCTGGGAGATTTCCCCATGGCAGACAGACAGAGG +
Preference number: 3 (lower is better)
Translates to: TAVCAFELLQLA*LGDFPMADRQR
Trigger: CCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR CAA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGAAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp GCAGAGAGCTCCATGGAGGGTGCTCTGTGGCCTCCCTaGAGAAGTCACAGACTACAAATGAGACTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: AESSMEGALWPP*RSHRLQMRLQE
Trigger: TTCTTGGAGTCTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAGCTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp GTAGAAAATGCAGTGGCTAGCCATGACCAATGCCAGTaGATGGGCCCACTGAGCTGCTTAAGGCTAAACCTG +
Preference number: 3 (lower is better)
Translates to: VENAVASHDQCQ*MGPLSCLRLNL
Trigger: CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCACTGCATTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR GCA 72 bp ACCCATGTAGAAAATGCAGTGGCTAGCCATGACCAATaGCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTA +
Preference number: 3 (lower is better)
Translates to: THVENAVASHDQ*QCMGPLSCLRL
Trigger: TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCACTGCATTTTCTACATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR GCA 72 bp TGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTaGTGGAAAATACATTCTCAACCCTGGCCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: CGGLWTTDHTGI*WKIHSQPWPSC
Trigger: GCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp GCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTaGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: ASEIQHGKSPCS*QAGFSLKAHRC
Trigger: GCACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTGGATTTCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR CCA 72 bp CATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATaGTGTTTTCAGAGGCTGCCATGCCCAGCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: HSAKARKPSPTQ*CFQRLPCPASP
Trigger: TGGGGAGGCTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp GGAAGGCTGCCTTACTCTTGTCCTTATAGCAGTGCGTaGAACTCATTTCTAAAGCCAGACGGGGACAGGGGA +
Preference number: 3 (lower is better)
Translates to: GRLPYSCPYSSA*NSFLKPDGDRG
Trigger: TCCCCTGTCCCCGTCTGGCTTTAGAAATGAGTTCCACGCACTGCTATAAGGACAAGAGTAAGGCAGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp GTTTGGACTAGAGATGCAGTCAGTGCTCGGCTGGCATaGAGTCTTGTTGGAGAACTTCATGCATGCCCACAG +
Preference number: 3 (lower is better)
Translates to: VWTRDAVSARLA*SLVGELHACPQ
Trigger: CTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCACTGACTGCATCTCTAGTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGGTTGAGCTCTGCTTCTaGACCGGTGGGAGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQVELCF*TGGSEL
Trigger: TAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAAC...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp CTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCGGAAGAGAAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: LVRISSKSFRMPRAVRKRKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...TCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000173757.2
3UTR-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAACAGCCTGCCCTTTCTaGAACCCATGTAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKTACPF*NPCRKC
Trigger: GCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGT...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAGCAATGAGTGCTCCTTaGCAGAGTAGGATCCTGATA +
Preference number: 3 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKAMSAP*QSRILI
Trigger: TATCAGGATCCTACTCTGCAAAGGAGCACTCATTGC...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp TGGGCTTCTTTAAGCTCTCGTTTCTTGGCCTGCAGCACCATCTCTTCATACTGCGCTTCTTCAGCTGGCTaGGCTGGGAGATTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: WASLSSRFLACSTISSYCASSAG*AGRFPH
Trigger: ATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...GCAGTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGAGCTTAAAGAAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR-3UTR CAA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGACAGCCTGCCCTTTCTaGAACCCATGTAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: LHGGCSVASLKKSQTTNETACPF*NPCRKC
Trigger: GCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGT...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp GCACCCTCAAGTTTGGGACTGAAAGTCAATGGCAATTaGGGTGGGAGGTACAGACCTCTGCAGGGTCAGTTT +
Preference number: 3 (lower is better)
Translates to: APSSLGLKVNGN*GGRYRPLQGQF
Trigger: AAACTGACCCTGCAGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp CCTCAGGCAGCCTGGTCAGAAACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGATATCTTCAAAAAGCT +
Preference number: 3 (lower is better)
Translates to: PQAAWSETGHCG*SPSWSGYLQKA
Trigger: AGCTTTTTGAAGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR GCA 72 bp TCAACCCTGGCCTTCCTGCACCCTCAGGAACCAGAATaGCAATGGATATCAGAAGGTAACCAGTTTCCACAG +
Preference number: 3 (lower is better)
Translates to: STLAFLHPQEPE*QWISEGNQFPQ
Trigger: CTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTGAGGGTGCAGGAAGGCCAGGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp TCTTTACAGAGCCTGTCTCTGTCCCTTCACAGCATATaGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: SLQSLSLSLHSI*LPCSNHSSSQD
Trigger: ATCTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAGACAGGCTCTGTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp ACCTTGTTTGGACTAGAGATGCAGTCAGTGCTCGGCTaGCATGGAGTCTTGTTGGAGAACTTCATGCATGCC +
Preference number: 3 (lower is better)
Translates to: TLFGLEMQSVLG*HGVLLENFMHA
Trigger: GGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCACTGACTGCATCTCTAGTCCAAACAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp GAGAAGTATGAGAGACGCCCTCAAAGTAGAGGAACGTaGAACTGTATAGCCTCGAAGGAGGGTACATCAGGC +
Preference number: 3 (lower is better)
Translates to: EKYERRPQSRGT*NCIASKEGTSG
Trigger: GCCTGATGTACCCTCCTTCGAGGCTATACAGTTCCACGTTCCTCTACTTTGAGGGCGTCTCTCATACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGACAGCCTGCCCTTTCTaGAACCCATGTAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQTACPF*NPCRKC
Trigger: GCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGT...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCGCAATGAGTGCTCCTTaGCAGAGTAGGATCCTGATA +
Preference number: 3 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPAMSAP*QSRILI
Trigger: TATCAGGATCCTACTCTGCAAAGGAGCACTCATTGC...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp ATCTCATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTTGCACCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: ISLFQVRTAFPMLSSTLHLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...GTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CCA 72 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATaGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: CCKANFSIRNPT*KEPLFLAGRLQ
Trigger: CTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR CCA 72 bp TCACACAAGTCCCAGTCAGTCTATAAAGACCTTGTTTaGACTAGAGATGCAGTCAGTGCTCGGCTGGCATGG +
Preference number: 3 (lower is better)
Translates to: SHKSQSVYKDLV*TRDAVSARLAW
Trigger: CCATGCCAGCCGAGCACTGACTGCATCTCTAGTCCAAACAAGGTCTTTATAGACTGACTGGGACTTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTaGGAGGTACAGACCTCTGCAGGGTCAGTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: LKFGTESQWQLR*EVQTSAGSVSS
Trigger: ACTGGAAACTGACCCTGCAGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGGTTGAGCTCTGCTTCTaGACCGGTGGGAGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLVELCF*TGGSEL
Trigger: TAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAAC...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGAGACCACACAGGGATTaGCTGGAAAATACATTCTCA +
Preference number: 3 (lower is better)
Translates to: ENSVHICKEGQQTGLGSARPHRD*LENTFS
Trigger: TGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCT...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTaGTTAAGGCTAAACCTGGATGTAATTCTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SHDQCQCMGPLS*LRLNLDVILFC
Trigger: ACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR GCA 72 bp CCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGAGAAATTCCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: PSWSGYLQKASG*PELCGREIPLH
Trigger: ATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
3UTR CCA 72 bp TCTCAGCCTTCTTGCTATCAAGTGTCAAGGCAACAATaGGTCAATGTCAGCACAAAAGTCAGGTGCGTTCCC +
Preference number: 3 (lower is better)
Translates to: SQPSCYQVSRQQ*VNVSTKVRCVP
Trigger: GGGAACGCACCTGACTTTTGTGCTGACATTGACCCATTGTTGCCTTGACACTTGATAGCAAGAAGGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CCA 72 bp AGATGCAGTCAGTGCTCGGCTGGCATGGAGTCTTGTTaGAGAACTTCATGCATGCCCACAGATTTATGTCAA +
Preference number: 3 (lower is better)
Translates to: RCSQCSAGMESC*RTSCMPTDLCQ
Trigger: TTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCACTGACTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTACAGCCTGCCCTTTCTaGAACCCATGTAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSTACPF*NPCRKC
Trigger: GCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGT...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTGCAATGAGTGCTCCTTaGCAGAGTAGGATCCTGATA +
Preference number: 3 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSAMSAP*QSRILI
Trigger: TATCAGGATCCTACTCTGCAAAGGAGCACTCATTGC...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp GCAATGAGTGCTCCTTTGCAGAGTAGGATCCTGATATaGACTCTCAGCCTTCTTGCTATCAAGTGTCAAGGC +
Preference number: 3 (lower is better)
Translates to: AMSAPLQSRILI*TLSLLAIKCQG
Trigger: GCCTTGACACTTGATAGCAAGAAGGCTGAGAGTTCATATCAGGATCCTACTCTGCAAAGGAGCACTCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp TGCAGGGTCAGTTTCCAGTTTGCCAAAACAGGAGTATaGGAGAAGTATGAGAGACGCCCTCAAAGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: CRVSFQFAKTGV*EKYERRPQSRG
Trigger: TCCTCTACTTTGAGGGCGTCTCTCATACTTCTCTCATACTCCTGTTTTGGCAAACTGGAAACTGACCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR GCA 72 bp ATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTaGACCCTCAGGAACCAGAATGCCAATGGATATCAG +
Preference number: 3 (lower is better)
Translates to: ICWKIHSQPWPS*TLRNQNANGYQ
Trigger: CTGATATCCATTGGCATTCTGGTTCCTGAGGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTGTTGAGCTCTGCTTCTaGACCGGTGGGAGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: NLINCCWNKGSRRQPALSVELCF*TGGSEL
Trigger: TAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAAC...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR GCA 72 bp TGCTCGGCTGGCATGGAGTCTTGTTGGAGAACTTCATaGATGCCCACAGATTTATGTCAAACAAGAAAAGGT +
Preference number: 3 (lower is better)
Translates to: CSAGMESCWRTS*MPTDLCQTRKG
Trigger: ACCTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCCGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAAAAGAGCCCCTGTTCTaGGCAGGCAGGCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: VILFCCKANFSIRNPTWKKEPLF*AGRLQS
Trigger: AGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR CCA 72 bp CCCACAGATTTATGTCAAACAAGAAAAGGTAAGGGCTaGGTTGTGAACACAGAGAATCCCACAATGGCATTC +
Preference number: 3 (lower is better)
Translates to: PTDLCQTRKGKG*VVNTENPTMAF
Trigger: GAATGCCATTGTGGGATTCTCTGTGTTCACAACCCAGCCCTTACCTTTTCTTGTTTGACATAAATCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATGTTGAGCTCTGCTTCTaGACCGGTGGGAGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: LNLDVILFCCKANFSIRNVELCF*TGGSEL
Trigger: TAACTCACTCCCACCGGTCAAGAAGCAGAGCTCAAC...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR TCA 72 bp GTAGCAAGTGTTATCAGGAGTTTCCTATTGGCAAACTaGGCAGTTAGAAGTACCTCTGAAGTAAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: VASVIRSFLLAN*AVRSTSEVSTA
Trigger: AGCAGTGCTTACTTCAGAGGTACTTCTAACTGCTCAGTTTGCCAATAGGAAACTCCTGATAACACTTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR-3UTR CAA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATGCAATGAGTGCTCCTTaGCAGAGTAGGATCCTGATA +
Preference number: 3 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNAMSAP*QSRILI
Trigger: TATCAGGATCCTACTCTGCAAAGGAGCACTCATTGC...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR TCA 72 bp ATTTATGTCAAACAAGAAAAGGTAAGGGCTGGGTTGTaGACACAGAGAATCCCACAATGGCATTCACAACAA +
Preference number: 3 (lower is better)
Translates to: IYVKQEKVRAGL*TQRIPQWHSQQ
Trigger: TTGTTGTGAATGCCATTGTGGGATTCTCTGTGTTCACAACCCAGCCCTTACCTTTTCTTGTTTGACATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAACTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GGCAGCCTGGTCAGAAACTGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATACTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLVRNWALWMKSILVRILSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...TATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR TCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGCTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCGACGGCAGCGGGCATaGACTCTGGAAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRRRQRA*TLEGPL
Trigger: GAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATCCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GAGCTTCTTCAGCTGGCTTGGCTGGGAGATTTCCCCATGGCAGACAGACAGAGGCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELLQLAWLGDFPMADRQRLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...CCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR GCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGCGACGGCAGCGGGCATaGACTCTGGAAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQRRQRA*TLEGPL
Trigger: GAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCG...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GGCAGCCTGGTCAGAAACTGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATACTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSLVRNWALWMKSILVRILLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...TATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTCCGTAGTCAGGCACTaGAAGGGATCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSVVRH*KGSGSR
Trigger: GCGGCTCCCAGATCCCTTTCAGTGCCTGACTACGGA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TGCGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: CGREIPLHLDRIRPRCGRVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...CCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR TCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLAGNRL*VANLQG
Trigger: ACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGC...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CTGGCTTGGCTGGGAGATTTCCCCATGGCAGACAGACAGAGGCTCTTCCTCAGATCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LAWLGDFPMADRQRLFLRSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...TCTGAGGAAGAGCCTCTGTCTGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR CCA 90 bp TCTCGACAGAATACGTCCCAGATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTATCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SRQNTSQMRQAKSKGRDLSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...TAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCTGTCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATTCCGTAGTCAGGCACTaGAAGGGATCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDSVVRH*KGSGSR
Trigger: GCGGCTCCCAGATCCCTTTCAGTGCCTGACTACGGA...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATCCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp GATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTGAAAATCCTTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: DAAGQVQGQGLTVQGENPWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...AGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp TCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCAAGTCCAAGGGCAGGGATTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SISTEYVPDAAGQVQGQGFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...TCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp CGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: RKRNSSPSRQNTSQMRQALGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...GGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGTCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACTCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTTCAGGATGCCCAGAGCTGTGCGGAAGAGAAATTCCTCTCCATCTCGACAGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SFRMPRAVRKRNSSPSRQTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR TCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAACCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTCACATGGACCACACTaGAGGGAACAGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSHGPH*REQALG
Trigger: ACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGCGACGGCAGCGGGCATaGACTCTGGAAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLRRQRA*TLEGPL
Trigger: GAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCG...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTACCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR CCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPSGHAL*KARSGT
Trigger: CGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCT...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAG +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQAAGGS*GCARRQ
Trigger: CTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGC...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CACAAGTCTCGAACCTTCTTAGAGCACCACATGGTTTCCCAGTTAGGCAAGATCGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HKSRTFLEHHMVSQLGKIVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...GATCTTGCCTAACTGGGAAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GCGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AEEKFLSISTEYVPDAAGFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...GCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGTCACATGGACCACACTaGAGGGAACAGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSASHGPH*REQALG
Trigger: ACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGA...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGCGACGGCAGCGGGCATaGACTCTGGAAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKRRQRA*TLEGPL
Trigger: GAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCG...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGCGACGGCAGCGGGCATaGACTCTGGAAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILRRQRA*TLEGPL
Trigger: GAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCG...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSWSGYLQKASGCPELCHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...GCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSASRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CGGCTGTCTTTCTGCAGTGCAGACAGCACCTGTGCCCATTTCTTGTTCCGGCTTCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RLSFCSADSTCAHFLFRLRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...AAGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp GCGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCTTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AEEKFLSISTEYVPDAAGFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...GCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTTCCGTAGTCAGGCACTaGAAGGGATCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSSVVRH*KGSGSR
Trigger: GCGGCTCCCAGATCCCTTTCAGTGCCTGACTACGGA...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGACCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACCTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CAGATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTGAAAATCCTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QMRQAKSKGRDLLYKVKILCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...GATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp CACAAGTCTCGAACCTTCTTAGAGCACCACATGGTTTCCCAGTTAGGCAAGATCTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HKSRTFLEHHMVSQLGKIWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...GATCTTGCCTAACTGGGAAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR GCA 90 bp ATCTGGACTGTGGAGATAGCTGCAAACACTTCATCTGCGGGCAGGTCCTCAGGCTGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IWTVEIAANTSSAGRSSGCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...GCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCAGCTATCTCCACAGTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCAAGTCGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: EKFLSISTEYVPDAAGQVGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...GACTTGGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNECRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSRLWR*GCRVSL
Trigger: CAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSARRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGTTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSALLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNELLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTTCAGGATGCCCAGAGCTGTGCGGAAGAGAAATTCCTCTCCATCTCGACAGCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SFRMPRAVRKRNSSPSRQLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...CTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173532.2
3UTR CAA 72 bp CTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTaGCTGGAAAATACATTCTCAACCCTGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LWRAVDYRPHRD*LENTFSTLAFL
Trigger: CAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTATCCGTAGTCAGGCACTaGAAGGGATCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVSVVRH*KGSGSR
Trigger: GCGGCTCCCAGATCCCTTTCAGTGCCTGACTACGGA...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATTCTTTGAATCTTTCTaGGCAGTCTCTCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKFFESF*AVSRSG
Trigger: CCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTTCTTTGAATCTTTCTaGGCAGTCTCTCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVFFESF*AVSRSG
Trigger: CCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGACTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTATGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGGCAGCCTGGTCAGAAACTGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RQPGQKLGTVDEVHPGQDSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...ATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCACACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGTGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLHHSSR*KGFHQS
Trigger: TGACTGATGGAAACCTTTCCACCTCGATGAATGGTG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSAGNRL*VANLQG
Trigger: ACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGC...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDSRLWR*GCRVSL
Trigger: CAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTCCCGGCTGTCTTTCTGCAGTGCAGACAGCACCTGTGCCCATTTCTTGTTCCGTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: LPAVFLQCRQHLCPFLVPYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...CGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSASVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCCGTAGTCAGGCACTaGAAGGGATCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCSVVRH*KGSGSR
Trigger: GCGGCTCCCAGATCCCTTTCAGTGCCTGACTACGGA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTTCTTTGAATCTTTCTaGGCAGTCTCTCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHFFESF*AVSRSG
Trigger: CCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGCTTCTGGGTCTTCTTTaGATCTTTCTGAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKLLGLL*IFLSSL
Trigger: GAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAG...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGCCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp ATCTCATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTTGCACTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ISLFQVRTAFPMLSSTLHFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...GTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTACTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLAGNRL*VANLQG
Trigger: ACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGC...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVDVSKL*VIIILQ
Trigger: CTGGAGAATGATGATGACCCACAGTTTACTGACGTC...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGAGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GATCTCATTGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCTTCAACCTTGCACGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: DLIVPGEDSVPNALFNLARRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...TGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR CCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 72 bp AGCACCCTCAAGTTTGGGACTGAAAGTCAATGGCAATaGAGGTGGGAGGTACAGACCTCTGCAGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: STLKFGTESQWQ*RWEVQTSAGSV
Trigger: AACTGACCCTGCAGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAGGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 72 bp CTGCAGCACCATCTCTTCATACTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTTGGCTGGGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: LQHHLFILLSVL*SFFSWLGWEIS
Trigger: GGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
3UTR CAA 72 bp GAGCACCACATGGTTTCCCAGTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCGTTCCCAATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EHHMVSQLGKIS*FQVRTAFPMLS
Trigger: AGAGAGCATTGGGAACGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAACTGGGAAACCATGTGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR TCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSLRDDL*LRLLSL
Trigger: AAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAG...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATTCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLFLVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATTCTTTGAATCTTTCTaGGCAGTCTCTCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRFFESF*AVSRSG
Trigger: CCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGCTTCTGGGTCTTCTTTaGATCTTTCTGAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQLLGLL*IFLSSL
Trigger: GAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAG...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFVCPRG*APWWTV
Trigger: CACTGTCCACCACGGCGCTCATCCTCGAGGACAGAC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCAATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: GREIPLHLDRIRPRCGRPMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...TGGCCTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTGAGCCTCCAGTGCTaGGGGACCGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLSLQC*GTATAP
Trigger: AGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR TCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACCTGCTCCCGCTCGCTaGAGGTGGGAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKPAPAR*RWELRV
Trigger: CACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGCACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAHHSSR*KGFHQS
Trigger: TGACTGATGGAAACCTTTCCACCTCGATGAATGGTG...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCAGNRL*VANLQG
Trigger: ACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGC...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDDVSKL*VIIILQ
Trigger: CTGGAGAATGATGATGACCCACAGTTTACTGACGTC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNEYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCC +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLPESTD*RLCRSS
Trigger: GGAAGATCGACACAGCCTTCAATCAGTGGACTCGGG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFLRDDL*LRLLSL
Trigger: AAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAG...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTACTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVLRDDL*LRLLSL
Trigger: AAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAG...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGTTCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLFLVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAA...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR TCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGATCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVILVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173532.2
CDS-3UTR GCA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTACTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCCACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPHHSSR*KGFHQS
Trigger: TGACTGATGGAAACCTTTCCACCTCGATGAATGGTG...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCACGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTATTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGTCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SPSWSGYLQKASGCPELCSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...GCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLRDDL*LRLLSL
Trigger: AAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCAGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATTTCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDFLVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAA...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR TCA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LHGGCSVASLKKSQTTNERKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKWERVA*SVFQPC
Trigger: ACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLFFLTF*LGEGGL
Trigger: CAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTATGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTGGACAGCGTTCCCAATaGTCTCTTCAACCTTGCACC +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCGQRSQ*SLQPCT
Trigger: GGTGCAAGGTTGAAGAGAGCATTGGGAACGCTGTCC...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCTGCAGACAGCACCTGTaGCCATTTCTTGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPCRQHL*PFLVPA
Trigger: AGCCGGAACAAGAAATGGGCACAGGTGCTGTCTGCA...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFAGNRL*VANLQG
Trigger: ACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTGCTTGGGAGAGGGTaGCCTGCTCGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLLGRG*PARSSS
Trigger: GCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTCCTCACATTCTGCTTaGGAGAGGGTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFSSHSA*ERVACS
Trigger: CGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGCGCCGTGGTGGACAGTaGCTCAAAATCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKRRGGQ*LKIQVL
Trigger: AAGAACCTGGATTTTGAGCCACTGTCCACCACGGCG...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGTTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGTTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCTTCAGCTGGCTTGGCTaGGAGATTTGCAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPFSWLG*EICRSV
Trigger: GACAGACCTGCAAATCTCCCAGCCAAGCCAGCTGAA...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATTTCCATCAGTCATCTTaGTCCCAGAAGAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDFHQSS*SQKKLL
Trigger: CAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAA...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS-3UTR TCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGATTCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRFLVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAA...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTCTTCTGGGTCTTCTTTaGATCTTTCTGAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSLLGLL*IFLSSL
Trigger: GAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAG...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCGGAAGAGAAATTCCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: QDIFKKLQDAQSCAEEKFLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...GAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR TCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTACTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTCACATGGACCACACTaGAGGGAACAGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFSHGPH*REQALG
Trigger: ACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACCTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTATCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACACCTTTCCTCCAGCTaGTTCCTCCGACGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKHLSSS*FLRRWA
Trigger: AGCCCAGCGTCGGAGGAAGCAGCTGGAGGAAAGGTG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCTGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCGGAAGAGAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: PGQDIFKKLQDAQSCAEESNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...CTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSRLWR*GCRVSL
Trigger: CAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPSRLWR*GCRVSL
Trigger: CAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILATQSC*CKSLVS
Trigger: TGAAACCAGCGACTTACACCAGCAGGACTGTGTTGC...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATACCGCCACCGCTCCTTaGCCCGAGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNTATAP*PEQDRC
Trigger: ACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGT...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 72 bp CCACAATGGCATTCACAACAAGGTGCCCAAGTCCCCTaGTCACAACACTTTCTGTATGACGTAAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: PQWHSQQGAQVP*SQHFLYDVRNV
Trigger: GACATTCCTTACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATGCCATTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTTCTTTGAATCTTTCTaGGCAGTCTCTCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCFFESF*AVSRSG
Trigger: CCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp CTGGTCAGAAACTGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATATCTTCACGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LVRNWALWMKSILVRISSRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...TGAAGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000150813.2
ENSMUST00000173757.2
CDS-3UTR GCA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCTCGGAGGGATTCCCTaGCACCACAAGTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNLGGIP*HHKSRT
Trigger: GGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAG...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTCCCGGCTGTCTTTCTaGAGTGCAGACAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKSRLSF*SADSTC
Trigger: ACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGCACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLHHSSR*KGFHQS
Trigger: TGACTGATGGAAACCTTTCCACCTCGATGAATGGTG...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: QEPECQWISEGNQFPQILSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTACTCAGGTGACAAAGGCAAAAAGGGACATTCAGCTAAAGCAAGGAAGCCATACGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: SYSGDKGKKGHSAKARKPYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCGTA...TGGCTTCCTTGCTTTAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGGTCCTCAGGCAGCCTaGTCAGAAACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKGPQAA*SETGHC
Trigger: ACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAACTGGGCACTGTGGATaGAGTCCATCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKTGHCG*SPSWSG
Trigger: TCCTGACCAGGATGGACTTCATCCACAGTGCCCAGT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAATCACATGGACCACACTaGAGGGAACAGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKSHGPH*REQALG
Trigger: ACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGA...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTCACATGGACCACACTaGAGGGAACAGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNSHGPH*REQALG
Trigger: ACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp GCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: AKARKPSPTQWCFQRLPCLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...GCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATAGAATACGTCCCAGATaGGGCAGGCCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNRIRPR*GRPSPR
Trigger: CCTTGGACTTGGCCTGCCGCATCTGGGACGTATTCT...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATTGCAAACACTTCATCTaGGGGCAGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNCKHFI*GQVLRQ
Trigger: CTGCCTGAGGACCTGCCCGCAGATGAAGTGTTTGCA...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATGCTGTCTTTCTGCAGTaGAGACAGCACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNAVFLQ*RQHLCP
Trigger: TGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGC...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPHHSSR*KGFHQS
Trigger: TGACTGATGGAAACCTTTCCACCTCGATGAATGGTG...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFSRLWR*GCRVSL
Trigger: CAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
3UTR CAA 72 bp ACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTaGATAGGGAGATTTAAAACACACCTTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: TTLQGPIFLTMS*IGRFKTHLSSL
Trigger: CAGAGATGAAAGGTGTGTTTTAAATCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNLRDDL*LRLLSL
Trigger: AAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAG...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTTCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLFLVKK*LNGCNS
Trigger: ACTATTGCACCCATTCAGTCACTTCTTTACAAGGAA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTTCATTCTCCACTTCTaGGCCTCCAGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNFILHF*ASSAEG
Trigger: TCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTGTGCAACATGTCATaGTACGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCGTATCATGACATGTTGCACAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR GCA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATGGATGCCCAGAGCTGTaGGGAAGAGAAATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNGCPEL*GREIPL
Trigger: GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTGCTTTCTCTTCACATaGACCACACTGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFCFLFT*TTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTTCTTCAGCTGGCTTaGCTGGGAGATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLLQLA*LGDLQV
Trigger: GACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTCAACTCGTTGCCAATaGCCAAGCTCCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSSTRCQ*PSSKLC
Trigger: GCAAAGTTTGGAGCTTGGCCATTGGCAACGAGTTGA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATAGCCTGGTCAGAAACTaGGCACTGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNSLVRN*ALWMKS
Trigger: GGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCT...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNAVEFH*VIACPR
Trigger: CCTAGGACAGGCTATGACTCAGTGAAACTCTACAGC...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTATGTCAAAGAGCTCGTaGGTGATGTTCAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSMSKSS*VMFNSL
Trigger: CAACGAGTTGAACATCACTCACGAGCTCTTTGACAT...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAATGCTCTCTTCAACCTTaGACCTTTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKCSLQP*TFPPAA
Trigger: AGCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCA...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGAGCAATAAAGGCATCTaGAGTATCGAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSNKGI*SIEVQD
Trigger: ATCTTGAACCTCGATACTGCAGATGCCTTTATTGCT...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCAAAAAGCTTCAGGATaGCCAGAGCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNQKASG*PELCGR
Trigger: TCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTG...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCLRLNLDVILFCCKANFDVSKL*VIIILQ
Trigger: CTGGAGAATGATGATGACCCACAGTTTACTGACGTC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAATCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTCAGTGTCTGAGGGATaGGCTTCCTTTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNSVSEG*ASFLHL
Trigger: GAGATGGAGAAAGGAAGCCCATCCCTCAGACACTGA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTTCCATCAGTCATCTTaGTCCCAGAAGAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCFHQSS*SQKKLL
Trigger: CAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS-3UTR TCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCTCTCTGTCTGCTGCTaGAAACCCAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNLSVCC*KPSIFI
Trigger: AATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAG...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR GCA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTCTCGTTTCTTGGCCTaGAGCACCATCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LNLDVILFCCKANFSIRNSRFLA*STISSY
Trigger: GTATGAAGAGATGGTGCTGCAGGCCAAGAAACGAGA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKDVSKL*VIIILQ
Trigger: CTGGAGAATGATGATGACCCACAGTTTACTGACGTC...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTTCTGGGTCTTCTTTaGATCTTTCTGAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLLGLL*IFLSSL
Trigger: GAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATCTTCTGGGTCTTCTTTaGATCTTTCTGAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNLLGLL*IFLSSL
Trigger: GAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAG...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
3UTR CAA 72 bp GAAAATATATACATCTTGAGAGAACAGATGCCCATGTaGTGGGAGAAAACTCAGTACACATCTGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ENIYILREQMPM*WEKTQYTSARK
Trigger: CTTCCTTGCAGATGTGTACTGAGTTTTCTCCCACAACATGGGCATCTGTTCTCTCAAGATGTATATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR TCA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGCGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SLVGELHACPQIYVKQEKRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR GCA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: NLINCCWNKGSRRQPALSLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR TCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACGGAAAAACGCCATTTaGCAGGGTTTATTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKRKNAI*QGLFKR
Trigger: TCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR GCA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAACTGTCTATCAAGCCTTaGATTTTGTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLSIKP*ILFSSK
Trigger: CTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAG...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS TCA 90 bp GGAAGACTTCCGCACAACCTGCTCCCGCTCGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAGCGGGCATGCACTCTGGAAGGCCCG +
Preference number: 5 (lower is better)
Translates to: GRLPHNLLPLAAGGS*GCARRQRACTLEGP
Trigger: CGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGGTTGTGCGGAAGTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 90 bp CAGGTGGGAGCTGAGGGTGTGCACGACGGCAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACGATCTCTGACTCAGACTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: QVGAEGVHDGSGHAL*KARSGTISDSDCFL
Trigger: GAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCGTGCACACCCTCAGCTCCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS TCA 90 bp CGGCAGCGGGCATGCACTCTGGAAGGCCCGCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTTCACATGGACCACACTGCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: RQRACTLEGPLRDDL*LRLLSLHMDHTAGN
Trigger: GTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS GCA 90 bp CATGCACTCTGGAAGGCCCGCTCCGGGACGATCTCTGACTCAGACTaGTTTCTCTTCACATGGACCACACTGCAGGGAACAGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HALWKARSGTISDSD*FLFTWTTLQGTGSG
Trigger: CCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCAGAGTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 90 bp GCCCGCTCCGGGACGATCTCTGACTCAGACTGCTTTCTCTTCACATaGACCACACTGCAGGGAACAGGCTCTGGGTTGCCAATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARSGTISDSDCFLFT*TTLQGTGSGLPISR
Trigger: CCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTCCAAGGGCAGGGACTTACTGTACAAGGTGAAAATCCTGTGGAAGCCAGAGGCGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: VQGQGLTVQGENPVEARGDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...GCCTCTGGCTTCCACAGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS GCA 90 bp GCCGTGGTGGACAGTGGCTCAAAATCCAGGTTCTTCCTCACATTCTaGTTGGGAGAGGGTGGCCTGCTCGGTCTTCCAGCCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: AVVDSGSKSRFFLTF*LGEGGLLGLPALSS
Trigger: TGAAGACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAACCTGGATTTTGAGCCACTGTCCACCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000141017.2
ENSMUST00000146430.8
ENSMUST00000150813.2
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTCTGTCCCTTCACAGCATATGGCTTCCCTGCTCCAACCACTCTAGCTCCCAAGGGAACAGGCTCTGGGTaGCCAATCTCCAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LCPFTAYGFPAPTTLAPKGTGSG*PISRVG
Trigger: TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCC...CTTGGGAGCTAGAGTGGTTGGAGCAGGGAAGCCATATGCTGTGAAGGGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TCCCGGCTGTCTTTCTGCAGTGCAGACAGCACCTGTGCCCATTTCTTGTTCCGGGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SRLSFCSADSTCAHFLFRASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...CCGGAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGGAACAGGCTCTGGGTaGCCAATCTCCAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: HDQCQCMGPLSCLRLNLDGTGSG*PISRVG
Trigger: TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCC...ATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGCTTTTGAGCTTCTTCAGCTGGCTTGGCTGGGAGATTTCCCCATGGCAGACATTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VLLSFFSWLGWEISPWQTFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...TGTCTGCCATGGGGAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141017.2
CDS-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAAGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CAA 90 bp CTTCAGGATGCCCAGAGCTGTGCGGAAGAGAAATTCCTCTCCATCTCGACAGAATTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LQDAQSCAEEKFLSISTEFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...TTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp GAAAACTCAGTACACATCTGCAAGGAAGGACAGCAGACAGGGCTGGGTAGTGCGGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ENSVHICKEGQQTGLGSAASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...CGCACTACCCAGCCCTGTCTGCTGTCCTTCCTTGCAGATGTGTACTGAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGCGGAAGAGAAATTCCTCTCCATCTCGACAGAATACGTCCCAGATGCGGCAGGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: VRKRNSSPSRQNTSQMRQAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...CTGCCGCATCTGGGACGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TGCGGGCAGGTCCTCAGGCAGCCTGGTCAGAAACTGGGCACTGTGGATGAAGTCATGATACGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: CGQVLRQPGQKLGTVDEVMIRTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCGTATCAT...GACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACCTGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNLGLPA*SSYSFW
Trigger: CCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAG...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp ACCACACAGGGATTTGCTGGAAAATACATTCTCAACCCTGGCCTTCCTGCACCCGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TTQGFAGKYILNPGLPAPASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...GGGTGCAGGAAGGCCAGGGTTGAGAATGTATTTTCCAGCAAATCCCTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: ASHDQCQCMGPLSCLRLNLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...GTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GGCAGCCTGGTCAGAAACTGGGCACTGTGGATGAAGTCCATCCTGGTCAGGATATTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: GSLVRNWALWMKSILVRILGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...TATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS TCA 90 bp GTCACTTCGGCTCAAGGCTTTGGAGGTGGGGCTGTAGAGTTTCACTaGGTCATAGCCTGTCCTAGGAAATGTGGAAGACTTCCGCACAAC +
Preference number: 5 (lower is better)
Translates to: VTSAQGFGGGAVEFH*VIACPRKCGRLPHN
Trigger: GTTGTGCGGAAGTCTTCCACATTTCCTAGGACAGGCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGAGCCGAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGGAACAGGCTCTGGGTaGCCAATCTCCAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDGTGSG*PISRVG
Trigger: TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CAA 90 bp AGGTACGGCTGTGGAGGGCTGTGGACTACAGACCACACAGGGATTTGCTGGAAATCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: RYGCGGLWTTDHTGICWKSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...TTTCCAGCAAATCCCTGTGTGGTCTGTAGTCCACAGCCCTCCACAGCCGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGAAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGAAAATCCTGTGGAAGCCAGAGGCATCAGGTCCCCATGGAGCTGGAGTTATAATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VKILWKPEASGPHGAGVIMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...TATAACTCCAGCTCCATGGGGACCTGATGCCTCTGGCTTCCACAGGATTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTCCATGGAGGGTGCTCTGTGGCCTCCCTGAAGAAGTCACAGACTACAAATGAGTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: LHGGCSVASLKKSQTTNELGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...CTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS GCA 90 bp GGTGTTGTAGGTCCTGAAGGGAGTCTCCTTGCCGACCATCTAGGATaGCCATCAATGCTACACCATTCATCGAGGTGGAAAGGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GVVGPEGSLLADHLG*PSMLHHSSRWKGFH
Trigger: ATGGAAACCTTTCCACCTCGATGAATGGTGTAGCATTGATGGGCATCCTAGATGGTCGGCAAGGAGACTCCCTTCAGGACCTACAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000136490.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 90 bp AGTTTCAATTTCCTCCCCTCCTCAGTCTCAGCAACACAGTCCTGCTaGTGTAAGTCGCTGGTTTCATTGATGGAGCTCAGGGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: SFNFLPSSVSATQSC*CKSLVSLMELRVTS
Trigger: TGACGTCACCCTGAGCTCCATCAATGAAACCAGCGACTTACACCAGCAGGACTGTGTTGCTGAGACTGAGGAGGGGAGGAAATTGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CAA 90 bp TGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGGTGCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: WKEPLFLAGRLQSESTQVPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...CACCTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SHDQCQCMGPLSCLRLNLPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...CAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATAGGGAGACTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PATTLQGPIFLTMSLIGRLGLPA*SSYSFW
Trigger: CCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAG...TCTCCCTATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGAGGCTGCCATGCCCAGTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: KQGSHLLHNGVFRGCHAQLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...CTGGGCATGGCAGCCTCTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGATTCACCAGCAACTACCCTGCAAGGGCCCATCTTCCTTACAATGTCCTTGATGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: RFTSNYPARAHLPYNVLDAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...ATCAAGGACATTGTAAGGAAGATGGGCCCTTGCAGGGTAGTTGCTGGTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGACCGCCACCGCTCCTaGGCCCGAGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: SCLRLNLDVILFCCKANFDRHRS*ARARQM
Trigger: CATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS TCA 90 bp TCTGGGTTGCCAATCTCCAGGGTAGGAATGCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCCAAAGCACCAAGTTTTAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SGLPISRVGMPESTD*RLCRSSKAPSFSEG
Trigger: ACCTTCACTAAAACTTGGTGCTTTGGAAGATCGACACAGCCTTCAATCAGTGGACTCGGGCATTCCTACCCTGGAGATTGGCAACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS TCA 90 bp GACCATGAGGTCCAAGATGTCCTCATTGCTGACCGACAACGTAGTTaGCAGCTCTGTGCCAAGACTAGACACACTGCAGACAGAGACATT +
Preference number: 5 (lower is better)
Translates to: DHEVQDVLIADRQRS*QLCAKTRHTADRDI
Trigger: AATGTCTCTGTCTGCAGTGTGTCTAGTCTTGGCACAGAGCTGTCAACTACGTTGTCGGTCAGCAATGAGGACATCTTGGACCTCATGGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CCA 90 bp GTCGCTGGTTTCATTGATGGAGCTCAGGGTGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAGGGTCACAATAGCGCTGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: VAGFIDGAQGDVSKL*VIIILQGHNSAGIA
Trigger: AGCAATTCCAGCGCTATTGTGACCCTGGAGAATGATGATGACCCACAGTTTACTGACGTCACCCTGAGCTCCATCAATGAAACCAGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGGGAACAGGCTCTGGGTaGCCAATCTCCAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQGTGSG*PISRVG
Trigger: TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCC...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGGGAACAGGCTCTGGGTaGCCAATCTCCAGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLGTGSG*PISRVG
Trigger: TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCC...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CTCAAGTTTGGGACTGAAAGTCAATGGCAATTGAGGTGGGAGGTACAGACCTCTAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: LKFGTESQWQLRWEVQTSKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...AGAGGTCTGTACCTCCCACCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TCACCAACAGGCATAGCAGATGAAGGGAACCCATGCAAACACAGCGCCATGAGGCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SPTGIADEGNPCKHSAMRPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...CCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGCTATGCCTGTTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: QEPECQWISEGNQFPQILFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGTCCATCCTGGTCAGGATATCTTCAAAAAGCTTCAGGATGCCCAGAGCTGTGCCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SPSWSGYLQKASGCPELCLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...GCACAGCTCTGGGCATCCTGAAGCTTTTTGAAGATATCCTGACCAGGATGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp CAACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACATGATACGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: QHGKSPCSWQAGFSLKAHMIRTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCGTATCAT...GTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGATGATACGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQMIRTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCGTATCAT...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTGGCTAGCCATGACCAATGCCAGTGCATGGGCCCACTGAGCTGCTTAAGGCTATCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: VASHDQCQCMGPLSCLRLSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...TAGCCTTAAGCAGCTCAGTGGGCCCATGCACTGGCATTGGTCATGGCTAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CATTCACAACAAGGTGCCCAAGTCCCCTTGTCACAACACTTTCTGTATGACGTAATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSQQGAQVPLSQHFLYDVMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...TACGTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GPLSCLRLNLDVILFCCKAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...CTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS CCA 90 bp ATGCTACACCATTCATCGAGGTGGAAAGGTTTCCATCAGTCATCTTaGTCCCAGAAGAAACTTTTGCCATCAGTCCCCAGAAGCGGTCTA +
Preference number: 5 (lower is better)
Translates to: MLHHSSRWKGFHQSS*SQKKLLPSVPRSGL
Trigger: TAGACCGCTTCTGGGGACTGATGGCAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAACCTTTCCACCTCGATGAATGGTGTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS CCA 90 bp GCCGACCATCTAGGATGCCCATCAATGCTACACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCATCTTGGTCCCAGAAGAAACTTTTG +
Preference number: 5 (lower is better)
Translates to: ADHLGCPSMLHHSSR*KGFHQSSWSQKKLL
Trigger: CAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAACCTTTCCACCTCGATGAATGGTGTAGCATTGATGGGCATCCTAGATGGTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS-3UTR CAA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTAAGTCGCTGGTTTCATaGATGGAGCTCAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCKSLVS*MELRVT
Trigger: CGTCACCCTGAGCTCCATCAATGAAACCAGCGACTT...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp GATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTGAAAATCCTTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: DAAGQVQGQGLTVQGENPSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...AGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150813.2
CDS-3UTR CAA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTCCCAGAAGAAACTTTaGCCATCAGTCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFSQKKL*PSVPRS
Trigger: GCTTCTGGGGACTGATGGCAAAAGTTTCTTCTGGGA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS-3UTR CAA 90 bp ACATGGAAAGAGCCCCTGTTCTTGGCAGGCAGGCTTCAGTCTGAAAGCACACAGTTTCCATCAGTCATCTaGGTCCCAGAAGAAACTTTT +
Preference number: 5 (lower is better)
Translates to: TWKEPLFLAGRLQSESTQFPSVI*VPEETF
Trigger: AAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAA...CTGTGTGCTTTCAGACTGAAGCCTGCCTGCCAAGAACAGGGGCTCTTTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS GCA 90 bp AAAAGCAATAAAGGCATCTGCAGTATCGAGGTTCAAGATCAACACTaGAGCTATAAAGGACATGCCCTGAACATAACCCACATCCGGCCG +
Preference number: 5 (lower is better)
Translates to: KSNKGICSIEVQDQH*SYKGHALNITHIRP
Trigger: CGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAGCTGCAGTGTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000150813.2
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLGLPA*SSYSFW
Trigger: CCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CAGGAACCAGAATGCCAATGGATATCAGAAGGTAACCAGTTTCCACAGATACTGCTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: QEPECQWISEGNQFPQILLGLPA*SSYSFW
Trigger: CCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAG...CAGTATCTGTGGAAACTGGTTACCTTCTGATATCCATTGGCATTCTGGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCGCTTCTTCAGCTGGCTaGGCTGGGAGATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SCLRLNLDVILFCCKANFASSAG*AGRFAG
Trigger: ACCTGCAAATCTCCCAGCCAAGCCAGCTGAAGAAGC...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCCCAGAAGAAACTTTaGCCATCAGTCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSQKKL*PSVPRS
Trigger: GCTTCTGGGGACTGATGGCAAAAGTTTCTTCTGGGA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS-3UTR CAA 90 bp AAGGGACATTCAGCTAAAGCAAGGAAGCCATCTCCTACACAATGGTGTTTTCAGTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: KGHSAKARKPSPTQWCFQSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...CTGAAAACACCATTGTGTAGGAGATGGCTTCCTTGCTTTAGCTGAATGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp GTTAAAGAGGAGCAAACTCTGCAGTCTCGTCCTTCCTATCTCTTTACAGAGCCTCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: VKEEQTLQSRPSYLFTEPPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...AGGCTCTGTAAAGAGATAGGAAGGACGAGACTGCAGAGTTTGCTCCTCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000031094.15
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LNLDVILFCCKANFSIRNFLTFC*GEGGLL
Trigger: GAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCLRLNLDVILFCCKANFMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS TCA 90 bp AGATGCGGCAGGCCAAGTCCAAGGGCAGGGACTTACTGTACAAGGTaGAAATCCAATCGATTAGGTAGATATCTGCAGTTAAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: RCGRPSPRAGTYCTR*KSNRLGRYLQLSCF
Trigger: AAAACAACTTAACTGCAGATATCTACCTAATCGATTGGATTTTCACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FVVRPTSASEIQHGKSPCPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...ACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCCTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLGLPA*SSYSFW
Trigger: CCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAG...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: NLINCCWNKGSRRQPALSLLSVL*SFFSWL
Trigger: AAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCTTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: SCLRLNLDVILFCCKANFLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...GAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATGCCAAGCTCCAAACTTaGCCTCTTACACTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LNLDVILFCCKANFSIRNAKLQT*PLTLGG
Trigger: CCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCATGATACGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: LFCCKANFSIRNPTWKEPMIRTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCGTATCAT...GGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAATGCTCTCTTCAACCTaGCACCTTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VILFCCKANFSIRNPTWKMLSST*HLSSSC
Trigger: GCAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCAT...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp CATGGGCCCACTGAGCTGCTTAAGGCTAAACCTGGATGTAATTCTGTTTTGTTGTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: HGPTELLKAKPGCNSVLLSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...CAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGGCCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp TGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTTCTTTCCATCAGTCATCTaGGTCCCAGAAGAAACTTTT +
Preference number: 5 (lower is better)
Translates to: CCKANFSIRNPTWKEPLFFPSVI*VPEETF
Trigger: AAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAA...GAACAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
CDS-3UTR CAA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: NLINCCWNKGSRRQPALSPSGSS*NLSEQS
Trigger: AGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGG...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAATTAGGCAAGATCTCATaGTTCCAGGTGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: VILFCCKANFSIRNPTWKLGKIS*FQVRTA
Trigger: CGCTGTCCTCACCTGGAACAATGAGATCTTGCCTAA...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTATGATACGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: NLINCCWNKGSRRQPALSMIRTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCGTATCAT...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp TTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAAGAGCCCCTGTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: FCCKANFSIRNPTWKEPLSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...CAGGGGCTCTTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp GTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATCCAACATGGAAATCCAAGATGTCCTCATaGCTGACCGACAACGTAGTT +
Preference number: 5 (lower is better)
Translates to: VILFCCKANFSIRNPTWKSKMSS*LTDNVV
Trigger: AACTACGTTGTCGGTCAGCAATGAGGACATCTTGGA...TTTCCATGTTGGATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS-3UTR CAA 90 bp AATTTAATTAACTGCTGCTGGAATAAAGGTTCAAGGAGACAGCCTGCCCTTTCTTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: NLINCCWNKGSRRQPALSSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...AGAAAGGGCAGGCTGTCTCCTTGAACCTTTATTCCAGCAGCAGTTAATTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp AGTCTTGTTGGAGAACTTCATGCATGCCCACAGATTTATGTCAAACAAGAAAAGTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: SLVGELHACPQIYVKQEKSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...CTTTTCTTGTTTGACATAAATCTGTGGGCATGCATGAAGTTCTCCAACAAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
CDS-3UTR CAA 90 bp CTAAACCTGGATGTAATTCTGTTTTGTTGTAAGGCCAACTTCAGCATCAGAAATTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: LNLDVILFCCKANFSIRNSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...ATTTCTGATGCTGAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS-3UTR CAA 90 bp GTAATTCCTTTCTTACAAGCATATGGGCCAAAAACAACTCTGAGGTTTCCTAATTCGGAAAAACGCCATTaGACAGGGTTTATTCAAAAG +
Preference number: 5 (lower is better)
Translates to: VIPFLQAYGPKTTLRFPNSEKRH*TGFIQK
Trigger: CTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGA...ATTAGGAAACCTCAGAGTTGTTTTTGGCCCATATGCTTGTAAGAAAGGAATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000126077.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000171385.8
ENSMUST00000173757.2
CDS GCA 72 bp CCTGCTCCCGCTCGCTGCAGGTGGGAGCTGAGGGTGTaGACGACGGCAGCGGGCATGCACTCTGGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: PAPARCRWELRV*TTAAGMHSGRP
Trigger: GGGCCTTCCAGAGTGCATGCCCGCTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS TCA 72 bp CCGCACAACCTGCTCCCGCTCGCTGCAGGTGGGAGCTaGGGGTGTGCACGACGGCAGCGGGCATGCACTCTG +
Preference number: 6 (lower is better)
Translates to: PHNLLPLAAGGS*GCARRQRACTL
Trigger: CAGAGTGCATGCCCGCTGCCGTCGTGCACACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGGTTGTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 72 bp GCTGAGGGTGTGCACGACGGCAGCGGGCATGCACTCTaGAAGGCCCGCTCCGGGACGATCTCTGACTCAGAC +
Preference number: 6 (lower is better)
Translates to: AEGVHDGSGHAL*KARSGTISDSD
Trigger: GTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCAGAGTGCATGCCCGCTGCCGTCGTGCACACCCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS GCA 72 bp CCTGTCCTAGGAAATGTGGAAGACTTCCGCACAACCTaGTCCCGCTCGCTGCAGGTGGGAGCTGAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: PVLGNVEDFRTT*SRSLQVGAEGV
Trigger: CACACCCTCAGCTCCCACCTGCAGCGAGCGGGAGCAGGTTGTGCGGAAGTCTTCCACATTTCCTAGGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS TCA 72 bp GCTTGGCTGGGAGATTTGCAGGTCTGTCCTCGAGGATaGGCGCCGTGGTGGACAGTGGCTCAAAATCCAGGT +
Preference number: 6 (lower is better)
Translates to: AWLGDLQVCPRG*APWWTVAQNPG
Trigger: ACCTGGATTTTGAGCCACTGTCCACCACGGCGCTCATCCTCGAGGACAGACCTGCAAATCTCCCAGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000150813.2
ENSMUST00000171385.8
CDS TCA 72 bp GCATGCACTCTGGAAGGCCCGCTCCGGGACGATCTCTaGCTCAGACTGCTTTCTCTTCACATGGACCACACT +
Preference number: 6 (lower is better)
Translates to: ACTLEGPLRDDL*LRLLSLHMDHT
Trigger: AGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCAGAGTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS GCA 72 bp TGGAAGGCCCGCTCCGGGACGATCTCTGACTCAGACTaGTTTCTCTTCACATGGACCACACTGCAGGGAACA +
Preference number: 6 (lower is better)
Translates to: WKARSGTISDSD*FLFTWTTLQGT
Trigger: TGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCGTCCCGGAGCGGGCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 72 bp TCTCTTCACATGGACCACACTGCAGGGAACAGGCTCTaGGTTGCCAATCTCCAGGGTAGGAATGCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: SLHMDHTAGNRL*VANLQGRNARV
Trigger: GACTCGGGCATTCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS GCA 72 bp CTGACTCAGACTGCTTTCTCTTCACATGGACCACACTaGAGGGAACAGGCTCTGGGTTGCCAATCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LTQTAFSSHGPH*REQALGCQSPG
Trigger: CCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CAA 72 bp TCTGTGCCAAGACTAGACACACTGCAGACAGAGACATaGTCACTTCGGCTCAAGGCTTTGGAGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SVPRLDTLQTET*SLRLKALEVGL
Trigger: CAGCCCCACCTCCAAAGCCTTGAGCCGAAGTGACAATGTCTCTGTCTGCAGTGTGTCTAGTCTTGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CAA 90 bp GTGGTGGACAGTGGCTCAAAATCCAGGTTCTTCCTCACATTCTGCTaGGGAGAGGGTGGCCTGCTCGGTCTTCCAGCCTTGTCTTCATAT +
Preference number: 6 (lower is better)
Translates to: VVDSGSKSRFFLTFC*GEGGLLGLPALSSY
Trigger: ATATGAAGACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAACCTGGATTTTGAGCCACTGTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000141017.2
ENSMUST00000146430.8
ENSMUST00000150813.2
ENSMUST00000171385.8
CDS TCA 72 bp GTTGCCAATCTCCAGGGTAGGAATGCCCGAGTCCACTaGTTGAAGGCTGTGTCGATCTTCCAAAGCACCAAG +
Preference number: 6 (lower is better)
Translates to: VANLQGRNARVH*LKAVSIFQSTK
Trigger: CTTGGTGCTTTGGAAGATCGACACAGCCTTCAATCAGTGGACTCGGGCATTCCTACCCTGGAGATTGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000136490.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS GCA 72 bp GGTTCTTCCTCACATTCTGCTTGGGAGAGGGTGGCCTaGTCGGTCTTCCAGCCTTGTCTTCATATTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GSSSHSAWERVA*SVFQPCLHIPS
Trigger: AGAAGGAATATGAAGACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCAGAATGTGAGGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CCA 72 bp CAGAGACATTGTCACTTCGGCTCAAGGCTTTGGAGGTaGGGCTGTAGAGTTTCACTGAGTCATAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: QRHCHFGSRLWR*GCRVSLSHSLS
Trigger: GGACAGGCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGAGCCGAAGTGACAATGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CAA 90 bp ATAGCGCTGGAATTGCTCGTGACCATGAGGTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTTGACAGCTCTGTGCCAAGACTAGAC +
Preference number: 6 (lower is better)
Translates to: IALELLVTMRSKMSS*LTDNVVDSSVPRLD
Trigger: GTCTAGTCTTGGCACAGAGCTGTCAACTACGTTGTCGGTCAGCAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGCGCTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS CAA 90 bp AACTGTGGGTCATCATCATTCTCCAGGGTCACAATAGCGCTGGAATaGCTCGTGACCATGAGGTCCAAGATGTCCTCATTGCTGACCGAC +
Preference number: 6 (lower is better)
Translates to: NCGSSSFSRVTIALE*LVTMRSKMSSLLTD
Trigger: GTCGGTCAGCAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGCGCTATTGTGACCCTGGAGAATGATGATGACCCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS TCA 72 bp GTCCAAGATGTCCTCATTGCTGACCGACAACGTAGTTaGCAGCTCTGTGCCAAGACTAGACACACTGCAGAC +
Preference number: 6 (lower is better)
Translates to: VQDVLIADRQRS*QLCAKTRHTAD
Trigger: GTCTGCAGTGTGTCTAGTCTTGGCACAGAGCTGTCAACTACGTTGTCGGTCAGCAATGAGGACATCTTGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS GCA 72 bp AATTTCCTCCCCTCCTCAGTCTCAGCAACACAGTCCTaGTGGTGTAAGTCGCTGGTTTCATTGATGGAGCTC +
Preference number: 6 (lower is better)
Translates to: NFLPSSVSATQS*WCKSLVSLMEL
Trigger: GAGCTCCATCAATGAAACCAGCGACTTACACCAGCAGGACTGTGTTGCTGAGACTGAGGAGGGGAGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS CCA 72 bp TGCAGACAGAGACATTGTCACTTCGGCTCAAGGCTTTaGAGGTGGGGCTGTAGAGTTTCACTGAGTCATAGC +
Preference number: 6 (lower is better)
Translates to: CRQRHCHFGSRL*RWGCRVSLSHS
Trigger: GCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGAGCCGAAGTGACAATGTCTCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CAA 72 bp GAATTGCTCGTGACCATGAGGTCCAAGATGTCCTCATaGCTGACCGACAACGTAGTTGACAGCTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: ELLVTMRSKMSS*LTDNVVDSSVP
Trigger: TGGCACAGAGCTGTCAACTACGTTGTCGGTCAGCAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS CAA 72 bp TGCTTGGGAGAGGGTGGCCTGCTCGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGGGTCTTCTTTGAATCT +
Preference number: 6 (lower is better)
Translates to: CLGEGGLLGLPA*SSYSFWVFFES
Trigger: AGATTCAAAGAAGACCCAGAAGGAATATGAAGACAAGGCTGGAAGACCGAGCAGGCCACCCTCTCCCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CAA 72 bp CTGCAGCACCATCTCTTCATACTGCTGTCTGTGCTTTaGAGCTTCTTCAGCTGGCTTGGCTGGGAGATTTGC +
Preference number: 6 (lower is better)
Translates to: LQHHLFILLSVL*SFFSWLGWEIC
Trigger: GCAAATCTCCCAGCCAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000126077.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000150813.2
ENSMUST00000171385.8
CDS TCA 72 bp CCAATCTCCAGGGTAGGAATGCCCGAGTCCACTGATTaGAGGCTGTGTCGATCTTCCAAAGCACCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: PISRVGMPESTD*RLCRSSKAPSF
Trigger: AAAACTTGGTGCTTTGGAAGATCGACACAGCCTTCAATCAGTGGACTCGGGCATTCCTACCCTGGAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000136490.8
ENSMUST00000139182.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000144997.2
ENSMUST00000146430.8
CDS CCA 72 bp TTCATTGATGGAGCTCAGGGTGACGTCAGTAAACTGTaGGTCATCATCATTCTCCAGGGTCACAATAGCGCT +
Preference number: 6 (lower is better)
Translates to: FIDGAQGDVSKL*VIIILQGHNSA
Trigger: AGCGCTATTGTGACCCTGGAGAATGATGATGACCCACAGTTTACTGACGTCACCCTGAGCTCCATCAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS CCA 72 bp CTAGGATGCCCATCAATGCTACACCATTCATCGAGGTaGAAAGGTTTCCATCAGTCATCTTGGTCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: LGCPSMLHHSSR*KGFHQSSWSQK
Trigger: CTTCTGGGACCAAGATGACTGATGGAAACCTTTCCACCTCGATGAATGGTGTAGCATTGATGGGCATCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS CAA 72 bp TCATCATCATTCTCCAGGGTCACAATAGCGCTGGAATaGCTCGTGACCATGAGGTCCAAGATGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: SSSFSRVTIALE*LVTMRSKMSSL
Trigger: CAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGCGCTATTGTGACCCTGGAGAATGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140179.3
ENSMUST00000140607.8
ENSMUST00000146430.8
ENSMUST00000173532.2
CDS CAA 72 bp GGTTTCCATCAGTCATCTTGGTCCCAGAAGAAACTTTaGCCATCAGTCCCCAGAAGCGGTCTAGATAAAGCC +
Preference number: 6 (lower is better)
Translates to: GFHQSSWSQKKL*PSVPRSGLDKA
Trigger: GGCTTTATCTAGACCGCTTCTGGGGACTGATGGCAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS CAA 72 bp CCATTCATCGAGGTGGAAAGGTTTCCATCAGTCATCTaGGTCCCAGAAGAAACTTTTGCCATCAGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PFIEVERFPSVI*VPEETFAISPQ
Trigger: CTGGGGACTGATGGCAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAACCTTTCCACCTCGATGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS CAA 90 bp AATGCTACACCATTCATCGAGGTGGAAAGGTTTCCATCAGTCATCTaGGTCCCAGAAGAAACTTTTGCCATCAGTCCCCAGAAGCGGTCT +
Preference number: 6 (lower is better)
Translates to: NATPFIEVERFPSVI*VPEETFAISPQKRS
Trigger: AGACCGCTTCTGGGGACTGATGGCAAAAGTTTCTTCTGGGACCAAGATGACTGATGGAAACCTTTCCACCTCGATGAATGGTGTAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136490.8
ENSMUST00000139182.8
CDS CAA 72 bp TTCCAGCCTTGTCTTCATATTCCTTCTGGGTCTTCTTaGAATCTTTCTGAGCAGTCTCTCGGAGTGGGACTT +
Preference number: 6 (lower is better)
Translates to: FQPCLHIPSGSS*NLSEQSLGVGL
Trigger: AAGTCCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAAGACCCAGAAGGAATATGAAGACAAGGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS CAA 90 bp AAACAGCTTCCATCCCAAGTCTCTCTGTCTATCAAGCCTTGCATTTaGTTTTCTAGCAAGCAAATTCCTTGTAAAGAAGTGACTGAATGG +
Preference number: 6 (lower is better)
Translates to: KQLPSQVSLSIKPCI*FSSKQIPCKEVTEW
Trigger: CCATTCAGTCACTTCTTTACAAGGAATTTGCTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAGAGAGACTTGGGATGGAAGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8
CDS TCA 72 bp GACTTACTGTACAAGGTGAAAATCCTTGTAAAGAAGTaGCTGAATGGGTGCAATAGTTTCAATTTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DLLYKVKILVKK*LNGCNSFNFLP
Trigger: GGGGAGGAAATTGAAACTATTGCACCCATTCAGTCACTTCTTTACAAGGATTTTCACCTTGTACAGTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173532.2
CDS CAA 72 bp CCATCCCAAGTCTCTCTGTCTATCAAGCCTTGCATTTaGTTTTCTAGCAAGCAAATTCCTTGTAAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: PSQVSLSIKPCI*FSSKQIPCKEV
Trigger: CACTTCTTTACAAGGAATTTGCTTGCTAGAAAACAAAATGCAAGGCTTGATAGACAGAGAGACTTGGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000031094.15
ENSMUST00000124036.8
ENSMUST00000130417.8
ENSMUST00000136189.8
ENSMUST00000140607.8
ENSMUST00000146430.8