Pregenerated sensors for TBC1D13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039678Ensembl transcript IDs: ENSMUST00000044556.12, ENSMUST00000131261.2, ENSMUST00000136183.8
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAAGGAGCGCATCGCGGCGTGCTCCAGGAGCACCCTGGACCATaGGAACCAGGCTGGGAAGACCTGGAGCTGGCCAGGACTGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: WEGAHRGVLQEHPGP*EPGWEDLELARTVA Trigger: AGCTACAGTCCTGGCCAGCTCCAGGTCTTCCCAGCCTGGTTCCCATGGTCCAGGGTGCTCCTGGAGCACGCCGCGATGCGCTCCTTCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR TCA 90 bp | CCGCCTCCCATGGGGGCAGATGGCAGAGGTAGCCCTCTGGTACTGTaGAGCTCCAGGCCTTCCAGTTTAGCCACCCTGGACCCAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PPPMGADGRGSPLVL*SSRPSSLATLDPEK Trigger: CTTCTCTGGGTCCAGGGTGGCTAAACTGGAAGGCCTGGAGCTTCACAGTACCAGAGGGCTACCTCTGCCATCTGCCCCCATGGGAGGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR TCA 90 bp | ATTGCCTCCCCTGACCAGGACTCAGGGAAGATGAAAGCACAGGGGTaGGGAGCTACTGGGCAGAGGCATGGCAGGACCCTGTCAGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: IASPDQDSGKMKAQG*GATGQRHGRTLSAS Trigger: GGAGGCTGACAGGGTCCTGCCATGCCTCTGCCCAGTAGCTCCTCACCCCTGTGCTTTCATCTTCCCTGAGTCCTGGTCAGGGGAGGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR GCA 90 bp | AACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCCCTGCCCTCTaGTCTCAGGAAGGCTTCAGGTGCCAGCTACTGGAGCCTCACTCC | + |
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Preference number: 1 (lower is better) Translates to: NLAKAMAWEGGSPAL*SQEGFRCQLLEPHS Trigger: GGAGTGAGGCTCCAGTAGCTGGCACCTGAAGCCTTCCTGAGAGCAGAGGGCAGGGCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | GCAGCCCTGCCCTCTGCTCTCAGGAAGGCTTCAGGTGCCAGCTACTaGAGCCTCACTCCTGCTGGCCAGTCTCTGGAGAAGGTTAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: AALPSALRKASGASY*SLTPAGQSLEKVKS Trigger: GCTCTTAACCTTCTCCAGAGACTGGCCAGCAGGAGTGAGGCTCCAGTAGCTGGCACCTGAAGCCTTCCTGAGAGCAGAGGGCAGGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | CTTCAGGTGCCAGCTACTGGAGCCTCACTCCTGCTGGCCAGTCTCTaGAGAAGGTTAAGAGCCCTTGCTGCCAACCTGCCTTCAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: LQVPATGASLLLASL*RRLRALAANLPSGL Trigger: GAGTCCTGAAGGCAGGTTGGCAGCAAGGGCTCTTAACCTTCTCCAGAGACTGGCCAGCAGGAGTGAGGCTCCAGTAGCTGGCACCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | TGGGGTGGGGGAGGCAGGCAAGAAGGAATGAATGCATCCGCGTCCTaGGCAGCATTTGCTGCGTCCCAGTCAACAAAGGGAGCAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: WGGGGRQEGMNASAS*AAFAASQSTKGAVL Trigger: CAGTACTGCTCCCTTTGTTGACTGGGACGCAGCAAATGCTGCCCAGGACGCGGATGCATTCATTCCTTCTTGCCTGCCTCCCCCACCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | TGTGCAGTCCGAGCTCTGCACAATCAGCACAGGCAGCTTCCCCTCTaGGGCCTCCACACCACTCCAGAATGGGAAGGCCAACTTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: CAVRALHNQHRQLPL*GLHTTPEWEGQLLQ Trigger: TTGCAGAAGTTGGCCTTCCCATTCTGGAGTGGTGTGGAGGCCCCAGAGGGGAAGCTGCCTGTGCTGATTGTGCAGAGCTCGGACTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131261.2 |
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| 3UTR CCA 90 bp | CTGGGAAGACCTGGAGCTGGCCAGGACTGTAGCTTCCCTTCAGGCTaGCTTTCTCACAGGCTCCTTTGTGTCCCCAAAACAAGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGRPGAGQDCSFPSG*LSHRLLCVPKTRVW Trigger: CCACACCCTTGTTTTGGGGACACAAAGGAGCCTGTGAGAAAGCCAGCCTGAAGGGAAGCTACAGTCCTGGCCAGCTCCAGGTCTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | GGTAGTAAAAAGGCAGGTAGAGTCCCAGCAGCACTCAACCCAACCTaGCTAAAGCAATGGCCTGGGAAGGAGGCAGCCCTGCCCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GSKKAGRVPAALNPT*LKQWPGKEAALPSA Trigger: AGCAGAGGGCAGGGCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGGACTCTACCTGCCTTTTTACTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | ACTGGGGATTCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCTaGGGATGGGAACAGGATGCCAATAAAGTTGGCCTCCAGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: TGDSCSDIEDLEASG*GWEQDANKVGLQGF Trigger: AAAGCCCTGGAGGCCAACTTTATTGGCATCCTGTTCCCATCCCCAGCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | TCCAACTGCGGAGCCACCCTACCCAAGACAAAGTCTCCATGTCCTTaGCCTTCATCTCAAGGACCAAGTGGTGGGCACAGGATGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SNCGATLPKTKSPCP*PSSQGPSGGHRMQV Trigger: GACCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTGGCTCCGCAGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACAAAGCAGAGACCTaGGAGACAACCCTACCGGCCACAAGCAAACACACCGGACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHKAET*ETTLPATSKHTGQG Trigger: TCCCTGTCCGGTGTGTTTGCTTGTGGCCGGTAGGGTTGTCTCCCAGGTCTCTGCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | GATTCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCTGGGGATaGGAACAGGATGCCAATAAAGTTGGCCTCCAGGGCTTTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: DSCSDIEDLEASGWG*EQDANKVGLQGFLT Trigger: AGTGAGAAAGCCCTGGAGGCCAACTTTATTGGCATCCTGTTCCCATCCCCAGCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR TCA 90 bp | CAACACTCAGAAGTTGTTTCTGGCCCATTAGCTAATTGCCTCCCCTaGCCAGGACTCAGGGAAGATGAAAGCACAGGGGTGAGGAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: QHSEVVSGPLANCLP*PGLREDESTGVRSY Trigger: GTAGCTCCTCACCCCTGTGCTTTCATCTTCCCTGAGTCCTGGTCAGGGGAGGCAATTAGCTAATGGGCCAGAAACAACTTCTGAGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR TCA 90 bp | GTTAAGAGCCCTTGCTGCCAACCTGCCTTCAGGACTCAAGCCACCTaGCCTCCGGAAGAAACATGGTCAGAAAAGTCTATAGGGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VKSPCCQPAFRTQAT*PPEETWSEKSIGFR Trigger: CCTGAACCCTATAGACTTTTCTGACCATGTTTCTTCCGGAGGTCAGGTGGCTTGAGTCCTGAAGGCAGGTTGGCAGCAAGGGCTCTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | CCAGATGGGAACATGGCCATCAAAGAGATGACATCACTCCTGAAATaGCAACTCCCAGGCACACAGCAGCCAGGGTATCTTACTCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: PDGNMAIKEMTSLLK*QLPGTQQPGYLTLQ Trigger: TTGGAGAGTAAGATACCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGATGTCATCTCTTTGATGGCCATGTTCCCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | GACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGTGGTaGGCACAGGATGCAGGTCTCCCACAGAAACAAATCAGATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: DKVSMSLAFISRTKW*AQDAGLPQKQIRCS Trigger: ACTGCATCTGATTTGTTTCTGTGGGAGACCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR TCA 90 bp | CTTAGAGGGTTCCCACATACCCTCACCCCACTGCCAGGGCATGTGTaGACACACATGTATACATACATACACACACACATACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: LRGFPHTLTPLPGHV*THMYTYIHTHIHTH Trigger: GTGTGTGTGTATGTGTGTGTGTATGTATGTATACATGTGTGTTCACACATGCCCTGGCAGTGGGGTGAGGGTATGTGGGAACCCTCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 90 bp | GCTTTCTTTGGTCCCTTGCCCTTGATGAGAACTACACACACCAGATaGGAACATGGCCATCAAAGAGATGACATCACTCCTGAAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: AFFGPLPLMRTTHTR*EHGHQRDDITPEMA Trigger: TGCCATTTCAGGAGTGATGTCATCTCTTTGATGGCCATGTTCCCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAGCACTCAACCCAACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCGGAGGGTCCCAGGGCTaGGGTGCAGGGAGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PSSTQPNLAKAMAWEGGSGGSQG*GAGSVA Trigger: TGCCACACTCCCTGCACCTCAGCCCTGGGACCCTCC...GCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCCCGGGAGCTGCAGGAGCTCAGGCTCGGGGTTCCCCCTTAAGAATCAAGCAGGCAGCGTCCAACTaGGGAGCCACCCTACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ELPGAAGAQARGSPLRIKQAASN*GATLPK Trigger: CTTGGGTAGGGTGGCTCCGCAGTTGGACGCTGCCTG...CTTGATTCTTAAGGGGGAACCCCGAGCCTGAGCTCCTGCAGCTCCCGGGAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAGACACAGAGGGGAAGCAGGGCCTTAGAGGGTTCCCACATACCCTCACCCCATGGGAACCAGGCTaGGAAGACCTGGAGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: EVDTEGKQGLRGFPHTLTPWEPG*EDLELA Trigger: GGCCAGCTCCAGGTCTTCCCAGCCTGGTTCCCATGG...GGTGAGGGTATGTGGGAACCCTCTAAGGCCCTGCTTCCCCTCTGTGTCTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAGCACTCAACCCAACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCGAGCACCCTGGACCATaGGAACCAGGCTGGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PSSTQPNLAKAMAWEGGSEHPGP*EPGWED Trigger: GTCTTCCCAGCCTGGTTCCCATGGTCCAGGGTGCTC...GCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | TCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGTATCTTACTCTCGAGCTCCGGCCCTGCTaGGCAGTCTGGGTGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SLLKWQLPGTQQPGYLTLELRPC*AVWVEG Trigger: ACCCTCCACCCAGACTGCTCAGCAGGGCCGGAGCTC...GAGAGTAAGATACCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGTGGTGGGCACAGGATGCAGGGGGGTGAGGAGCTACTaGGCAGAGGCATGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LHVLGLHLKDQVVGTGCRGVRSY*AEAWQD Trigger: GTCCTGCCATGCCTCTGCCCAGTAGCTCCTCACCCC...CCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGGTACTGGGGATTCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCACTAAGCTACACTCCTaGATGCTGGCCTCAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GAGTGDSCSDIEDLEASGTKLHS*MLASGS Trigger: GCTCCCTGAGGCCAGCATTCAGGAGTGTAGCTTAGT...GCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATCCCCAGTACCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGCAGAGGGGAGGAGAGCGCCAGGGTAAAGAGGACAGACAAAAGAAAGACGCTCCAGGAGCACCCTaGACCATGGGAACCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: REQRGGERQGKEDRQKKDAPGAP*TMGTRL Trigger: CAGCCTGGTTCCCATGGTCCAGGGTGCTCCTGGAGC...GTCTTTCTTTTGTCTGTCCTCTTTACCCTGGCGCTCTCCTCCCCTCTGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTAGCATCCTGGCCACTCCTCCCCAGGTCACTTGCCACTCTGCAATAAATGCTGAGCAGTCTGGGTaGAGGGTCCCAGGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SFSILATPPQVTCHSAINAEQSG*RVPGLR Trigger: CCTCAGCCCTGGGACCCTCCACCCAGACTGCTCAGC...ATTTATTGCAGAGTGGCAAGTGACCTGGGGAGGAGTGGCCAGGATGCTAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCACACAGCAGCCAGGGTATCTTACTCTCCAACTGAAGGCTCTCCCCATCGTCACTCAGCTCTTCTaGGGTGCTTCCCCAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PGTQQPGYLTLQLKALPIVTQLF*GASPGS Trigger: ACTGCCTGGGGAAGCACCCCAGAAGAGCTGAGTGAC...GATGGGGAGAGCCTTCAGTTGGAGAGTAAGATACCCTGGCTGCTGTGTGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGTACTGGGGATTCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCAGCCACACACGCCTCTaGCAAAGGAAGAAAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAGTGDSCSDIEDLEASGSHTRL*QRKKRD Trigger: GTCCCTTTTCTTCCTTTGCCAGAGGCGTGTGTGGCT...GCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATCCCCAGTACCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CACGGATCTGTAGACAGAGCAACCAGGATTAAGACAGGTGTGATGTGCAGTCCGAGGCAGCTTCCCCTCTaGGGCCTCCACACCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: HGSVDRATRIKTGVMCSPRQLPL*GLHTTP Trigger: TGGAGTGGTGTGGAGGCCCCAGAGGGGAAGCTGCCT...CGGACTGCACATCACACCTGTCTTAATCCTGGTTGCTCTGTCTACAGATCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131261.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGTGGTGGGCACAGGATGCAGGGGTACTGGGGATTCCTaGTCTGACATAGAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: LHVLGLHLKDQVVGTGCRGTGDS*SDIEDL Trigger: CAGGTCCTCTATGTCAGAGCAGGAATCCCCAGTACC...CCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CACCCTACCCAAGACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGGTGGAGCAAGCGCAGTaGCTGCTCTTCCAAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HPTQDKVSMSLAFISRTKVEQAQ*LLFQSW Trigger: CCAGCTTTGGAAGAGCAGCCACTGCGCTTGCTCCAC...CTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CACCCTACCCAAGACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGCCCAAAACAAGGGTGTaGAGCAAGCGCAGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HPTQDKVSMSLAFISRTKPKTRV*SKRSGC Trigger: GCAGCCACTGCGCTTGCTCCACACCCTTGTTTTGGG...CTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | CACCCTACCCAAGACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGGCTAATTGCCTCCCCTaGCCAGGACTCAGGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: HPTQDKVSMSLAFISRTKANCLP*PGLRED Trigger: ATCTTCCCTGAGTCCTGGTCAGGGGAGGCAATTAGC...CTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTAGCATCCTGGCCACTCCTCCCCAGGTCACTTGCCACTCTGCAATAAATATACCCTCACCCCACTaGCAGGGCATGTGTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: SFSILATPPQVTCHSAINIPSPH*QGMCEH Trigger: GTGTTCACACATGCCCTGGCAGTGGGGTGAGGGTAT...ATTTATTGCAGAGTGGCAAGTGACCTGGGGAGGAGTGGCCAGGATGCTAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGATGACATCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGAGCTTCCCTTCAGGCTaGCTTTCTCACAGGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: KEMTSLLKWQLPGTQQPGSFPSG*LSHRLL Trigger: AAGGAGCCTGTGAGAAAGCCAGCCTGAAGGGAAGCT...CCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGATGTCATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | CACCCTACCCAAGACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGGATAGATCAAGCACATaGCCAGGAAGGCCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: HPTQDKVSMSLAFISRTKDRSST*PGRPAP Trigger: AGGTGCTGGCCTTCCTGGTCATGTGCTTGATCTATC...CTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | CACCCTACCCAAGACAAAGTCTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGGCCTCAGGCTGGGGATaGGAACAGGATGCCAATAAA | + |
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Preference number: 2 (lower is better) Translates to: HPTQDKVSMSLAFISRTKASGWG*EQDANK Trigger: TTTATTGGCATCCTGTTCCCATCCCCAGCCTGAGGC...CTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CAA 90 bp | TTCCAGTTTAGCCACCCTGGACCCAGAGAAGCTTTCTTTGGTCCCTaGCCCTTGATGAGAACTACACACACCAGATGGGAACATGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: FQFSHPGPREAFFGP*PLMRTTHTRWEHGH Trigger: ATGGCCATGTTCCCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCTGGGTCCAGGGTGGCTAAACTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | TCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGTATCTTACTCTCCTGCCAGGGCATGTGTaGACACACATGTATACATAC | + |
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Preference number: 2 (lower is better) Translates to: SLLKWQLPGTQQPGYLTLLPGHV*THMYTY Trigger: GTATGTATACATGTGTGTTCACACATGCCCTGGCAG...GAGAGTAAGATACCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTGTCCAAATAAATAGTAAAATACGTCCCAGGTGTTGTGTATTGAGAGAGCCGCTCCGCCTCCCATaGGGGCAGATGGCAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: ACVQINSKIRPRCCVLREPLRLP*GQMAEV Trigger: TACCTCTGCCATCTGCCCCCATGGGAGGCGGAGCGG...CTCTCTCAATACACAACACCTGGGACGTATTTTACTATTTATTTGGACACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGGTCTCCCACAGAAACAAATCAGATGCAGTGATTCCAGTAGCATGGTCAAGGTTAAGAGCCCTTaGTGCCAACCTGCCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DAGLPQKQIRCSDSSSMVKVKSP*CQPAFR Trigger: CCTGAAGGCAGGTTGGCAGCAAGGGCTCTTAACCTT...GACCATGCTACTGGAATCACTGCATCTGATTTGTTTCTGTGGGAGACCTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTGTCCAAATAAATAGTAAAATACGTCCCAGGTGTTGTGTATTGAGAGAGTCCTTTCTCCATTCTTaGGTAGAAAATGGGCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ACVQINSKIRPRCCVLRESFLHS*VENGRE Trigger: CTCTCGCCCATTTTCTACTCAAGAATGGAGAAAGGA...CTCTCTCAATACACAACACCTGGGACGTATTTTACTATTTATTTGGACACAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| 3UTR CCA 72 bp | GGAAGGAGCGCATCGCGGCGTGCTCCAGGAGCACCCTaGACCATGGGAACCAGGCTGGGAAGACCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GRSASRRAPGAP*TMGTRLGRPGA Trigger: AGCTCCAGGTCTTCCCAGCCTGGTTCCCATGGTCCAGGGTGCTCCTGGAGCACGCCGCGATGCGCTCCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR GCA 72 bp | GGCAGCCCTGCCCTCTGCTCTCAGGAAGGCTTCAGGTaGCAGCTACTGGAGCCTCACTCCTGCTGGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSPALCSQEGFR*QLLEPHSCWPV Trigger: GACTGGCCAGCAGGAGTGAGGCTCCAGTAGCTGGCACCTGAAGCCTTCCTGAGAGCAGAGGGCAGGGCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | GTGCTCCAGGAGCACCCTGGACCATGGGAACCAGGCTaGGAAGACCTGGAGCTGGCCAGGACTGTAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLQEHPGPWEPG*EDLELARTVAS Trigger: GGAAGCTACAGTCCTGGCCAGCTCCAGGTCTTCCCAGCCTGGTTCCCATGGTCCAGGGTGCTCCTGGAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | GAAAGCACAGGGGTGAGGAGCTACTGGGCAGAGGCATaGCAGGACCCTGTCAGCCTCCTAGGCCCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ESTGVRSYWAEA*QDPVSLLGPKW Trigger: CCATTTGGGGCCTAGGAGGCTGACAGGGTCCTGCCATGCCTCTGCCCAGTAGCTCCTCACCCCTGTGCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR TCA 72 bp | CCTGACCAGGACTCAGGGAAGATGAAAGCACAGGGGTaGGGAGCTACTGGGCAGAGGCATGGCAGGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PDQDSGKMKAQG*GATGQRHGRTL Trigger: CAGGGTCCTGCCATGCCTCTGCCCAGTAGCTCCTCACCCCTGTGCTTTCATCTTCCCTGAGTCCTGGTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR TCA 72 bp | GGCTGCCATTGGAGCAGGTACTGGGGATTCCTGCTCTaGCATAGAGGACCTGGAGGCCTCAGGCTGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GCHWSRYWGFLL*HRGPGGLRLGM Trigger: CATCCCCAGCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATCCCCAGTACCTGCTCCAATGGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | TCCAGGGCTTTCTCACTAAGCTACACTCCTGAATGCTaGCCTCAGGGAGCAGAGGGGAGGAGAGCGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRAFSLSYTPEC*PQGAEGRRAPG Trigger: CCCTGGCGCTCTCCTCCCCTCTGCTCCCTGAGGCCAGCATTCAGGAGTGTAGCTTAGTGAGAAAGCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | CCCTCTGCTCTCAGGAAGGCTTCAGGTGCCAGCTACTaGAGCCTCACTCCTGCTGGCCAGTCTCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSALRKASGASY*SLTPAGQSLEK Trigger: CTTCTCCAGAGACTGGCCAGCAGGAGTGAGGCTCCAGTAGCTGGCACCTGAAGCCTTCCTGAGAGCAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | CGAGCTCTGCACAATCAGCACAGGCAGCTTCCCCTCTaGGGCCTCCACACCACTCCAGAATGGGAAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RALHNQHRQLPL*GLHTTPEWEGQ Trigger: TTGGCCTTCCCATTCTGGAGTGGTGTGGAGGCCCCAGAGGGGAAGCTGCCTGTGCTGATTGTGCAGAGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131261.2 |
||
| 3UTR CCA 72 bp | CTCAGGGAAGATGAAAGCACAGGGGTGAGGAGCTACTaGGCAGAGGCATGGCAGGACCCTGTCAGCCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LREDESTGVRSY*AEAWQDPVSLL Trigger: TAGGAGGCTGACAGGGTCCTGCCATGCCTCTGCCCAGTAGCTCCTCACCCCTGTGCTTTCATCTTCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | ACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTaGGGTGCTTCCCCAGGCAGTCTGAGCACCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: TVALELAVTQLF*GASPGSLSTNT Trigger: AGTGTTGGTGCTCAGACTGCCTGGGGAAGCACCCCAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | CCAGCTACTGGAGCCTCACTCCTGCTGGCCAGTCTCTaGAGAAGGTTAAGAGCCCTTGCTGCCAACCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PATGASLLLASL*RRLRALAANLP Trigger: AGGCAGGTTGGCAGCAAGGGCTCTTAACCTTCTCCAGAGACTGGCCAGCAGGAGTGAGGCTCCAGTAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | AAGGCAGGTAGAGTCCCAGCAGCACTCAACCCAACCTaGCTAAAGCAATGGCCTGGGAAGGAGGCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KAGRVPAALNPT*LKQWPGKEAAL Trigger: CAGGGCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGGACTCTACCTGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR GCA 72 bp | GGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGGGGTaGTTCCCCAGGCAGTCTGAGCACCAACACTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPRTGSHSALLG*FPRQSEHQHSE Trigger: TTCTGAGTGTTGGTGCTCAGACTGCCTGGGGAAGCACCCCAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | TTGTGTCCCCAAAACAAGGGTGTGGAGCAAGCGCAGTaGCTGCTCTTCCAAAGCTGGGACCCTGCTACCACG | + |
|
Preference number: 3 (lower is better) Translates to: LCPQNKGVEQAQ*LLFQSWDPATT Trigger: CGTGGTAGCAGGGTCCCAGCTTTGGAAGAGCAGCCACTGCGCTTGCTCCACACCCTTGTTTTGGGGACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR GCA 72 bp | AGGAATGAATGCATCCGCGTCCTGGGCAGCATTTGCTaGGTCCCAGTCAACAAAGGGAGCAGTACTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RNECIRVLGSIC*VPVNKGSSTGA Trigger: AGCCCCAGTACTGCTCCCTTTGTTGACTGGGACGCAGCAAATGCTGCCCAGGACGCGGATGCATTCATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | CCTGGAGCTGGCCAGGACTGTAGCTTCCCTTCAGGCTaGCTTTCTCACAGGCTCCTTTGTGTCCCCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGAGQDCSFPSG*LSHRLLCVPKT Trigger: TGTTTTGGGGACACAAAGGAGCCTGTGAGAAAGCCAGCCTGAAGGGAAGCTACAGTCCTGGCCAGCTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | TCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCTaGGGATGGGAACAGGATGCCAATAAAGTTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCSDIEDLEASG*GWEQDANKVGL Trigger: GAGGCCAACTTTATTGGCATCCTGTTCCCATCCCCAGCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | GGAGCCACCCTACCCAAGACAAAGTCTCCATGTCCTTaGCCTTCATCTCAAGGACCAAGTGGTGGGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GATLPKTKSPCP*PSSQGPSGGHR Trigger: CCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR TCA 72 bp | TCACTCAGCTCTTCTGGGGTGCTTCCCCAGGCAGTCTaGGCACCAACACTCAGAAGTTGTTTCTGGCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SLSSSGVLPQAV*APTLRSCFWPI Trigger: AATGGGCCAGAAACAACTTCTGAGTGTTGGTGCTCAGACTGCCTGGGGAAGCACCCCAGAAGAGCTGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | ACACACACACACACACACACACACAAAGCAGAGACCTaGGAGACAACCCTACCGGCCACAAGCAAACACACC | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHKAET*ETTLPATSKHT Trigger: GGTGTGTTTGCTTGTGGCCGGTAGGGTTGTCTCCCAGGTCTCTGCTTTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR TCA 72 bp | GAAGTTGTTTCTGGCCCATTAGCTAATTGCCTCCCCTaGCCAGGACTCAGGGAAGATGAAAGCACAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EVVSGPLANCLP*PGLREDESTGV Trigger: CACCCCTGTGCTTTCATCTTCCCTGAGTCCTGGTCAGGGGAGGCAATTAGCTAATGGGCCAGAAACAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | TCCATGTCCTTGGCCTTCATCTCAAGGACCAAGTGGTaGGCACAGGATGCAGGTCTCCCACAGAAACAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SMSLAFISRTKW*AQDAGLPQKQI Trigger: GATTTGTTTCTGTGGGAGACCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCCAAAGTCAGAAGATAGATCAAGCACATGACCAGGAAGGCCAGCACCTCAGGATGCCAATAAAGTaGGCCTCCAGGGCTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPQSQKIDQAHDQEGQHLRMPIK*ASRAFS Trigger: TGAGAAAGCCCTGGAGGCCAACTTTATTGGCATCCT...GAGGTGCTGGCCTTCCTGGTCATGTGCTTGATCTATCTTCTGACTTTGGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | TCCCCATCCCTCCTTTCTCCATTCTTGAGTAGAAAATaGGCGAGAGGCTCAAAGCATCACAGGCTGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSLLSPFLSRK*ARGSKHHRLPL Trigger: CAATGGCAGCCTGTGATGCTTTGAGCCTCTCGCCCATTTTCTACTCAAGAATGGAGAAAGGAGGGATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | AACATGGCCATCAAAGAGATGACATCACTCCTGAAATaGCAACTCCCAGGCACACAGCAGCCAGGGTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: NMAIKEMTSLLK*QLPGTQQPGYL Trigger: AAGATACCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGATGTCATCTCTTTGATGGCCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CCA 72 bp | GGTCCCTTGCCCTTGATGAGAACTACACACACCAGATaGGAACATGGCCATCAAAGAGATGACATCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPLPLMRTTHTR*EHGHQRDDITP Trigger: AGGAGTGATGTCATCTCTTTGATGGCCATGTTCCCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR TCA 72 bp | TTCCCACATACCCTCACCCCACTGCCAGGGCATGTGTaGACACACATGTATACATACATACACACACACATA | + |
|
Preference number: 3 (lower is better) Translates to: FPHTLTPLPGHV*THMYTYIHTHI Trigger: TATGTGTGTGTGTATGTATGTATACATGTGTGTTCACACATGCCCTGGCAGTGGGGTGAGGGTATGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR TCA 90 bp | GAGCTCCCGGGAGCTGCAGGAGCTCAGGCTCGGGGTTCCCCCTTAAGAATCAAGTTTGCGGGTCCAGGATaGGCAGGCAGGGGTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPGAAGAQARGSPLRIKFAGPG*AGRGTQ Trigger: CTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAA...CTTGATTCTTAAGGGGGAACCCCGAGCCTGAGCTCCTGCAGCTCCCGGGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAGCACTCAACCCAACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCTTCCTGGCCACCGTCTaGGACTTCAGTGTCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSTQPNLAKAMAWEGGSFLATV*DFSVVC Trigger: GCAGACGACACTGAAGTCTCAGACGGTGGCCAGGAA...GCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | AGGCACCGCAGTCCGCCCTCACAGGGGATGCAGATAAAGACACGGATCTGTAGAAGGCAGCTTCCCCTCTaGGGCCTCCACACCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHRSPPSQGMQIKTRICRRQLPL*GLHTTP Trigger: TGGAGTGGTGTGGAGGCCCCAGAGGGGAAGCTGCCT...TCTACAGATCCGTGTCTTTATCTGCATCCCCTGTGAGGGCGGACTGCGGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136183.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGCACTCAACCCAACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCGGCAGCAAGAACTCCTaGGACAGCAGCAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSTQPNLAKAMAWEGGSGSKNS*DSSNVS Trigger: GCTGACATTGCTGCTGTCCCAGGAGTTCTTGCTGCC...GCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CACCGGACAGGGACAAACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGGGGCTTCGCAGCCATTaGGTAGCACCTCATACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRTGTNGGPRTGSHSALLGLRSH*VAPHTR Trigger: ACGAGTATGAGGTGCTACCCAATGGCTGCGAAGCCC...CAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGTTTGTCCCTGTCCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTGTCCCCAAAACAAGGGTGTGGAGCAAGCGCAGTGGCTGCTCTTCCAACCCCGCTTCGATTCCTaGCCACCGTCTGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLCPQNKGVEQAQWLLFQPRFDS*PPSETS Trigger: TGAAGTCTCAGACGGTGGCCAGGAATCGAAGCGGGG...TTGGAAGAGCAGCCACTGCGCTTGCTCCACACCCTTGTTTTGGGGACACAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGACACAGAGGGGAAGCAGGGCCTTAGAGGGTTCCCACATACCCTCACCGCTTTCTGTAGGATCTaGCAGACGTCTGTGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVDTEGKQGLRGFPHTLTAFCRI*QTSVMG Trigger: CCCCATCACAGACGTCTGCCAGATCCTACAGAAAGC...GGTGAGGGTATGTGGGAACCCTCTAAGGCCCTGCTTCCCCTCTGTGTCTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CAA 72 bp | CGGAGCCACCCTACCCAAGACAAAGTCTCCATGTCCTaGGCCTTCATCTCAAGGACCAAGTGGTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHPTQDKVSMS*AFISRTKWWAQ Trigger: CTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAGACTTTGTCTTGGGTAGGGTGGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR TCA 90 bp | CACCGGACAGGGACAAACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGAGTCCCAGATACGGATaGCATCAGGCAGCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HRTGTNGGPRTGSHSALLSPRYG*HQAART Trigger: AGTTCTTGCTGCCTGATGTCATCCGTATCTGGGACT...CAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGTTTGTCCCTGTCCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCACCGCAGTCCGCCCTCACAGGGGATGCAGATAAAGACACGGATCTGTTCCTTCAGGACATCCTaGAAATCTGCAATCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRHRSPPSQGMQIKTRICSFRTS*KSAIRL Trigger: GAGCCGGATTGCAGATTTCCAGGATGTCCTGAAGGA...ACAGATCCGTGTCTTTATCTGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136183.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCACACAGCAGCCAGGGTATCTTACTCTCCAACTGAAGGCTCTCCCCATCCTGGGCACAACCTCCTaGCATCTTTGTCAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGTQQPGYLTLQLKALPILGTTS*HLCQSG Trigger: TCCAGATTGACAAAGATGTCAGGAGGTTGTGCCCAG...GATGGGGAGAGCCTTCAGTTGGAGAGTAAGATACCCTGGCTGCTGTGTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGGCCTCCACACCACTCCAGAATGGGAAGGCCAACTTCTGCAATGCTGTTCCTTCAGGACATCCTaGAAATCTGCAATCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWGLHTTPEWEGQLLQCCSFRTS*KSAIRL Trigger: GAGCCGGATTGCAGATTTCCAGGATGTCCTGAAGGA...ACAGCATTGCAGAAGTTGGCCTTCCCATTCTGGAGTGGTGTGGAGGCCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131261.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATGACATCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGTCTGCTTGGCCAGGATaGAAGTCCACGAGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEMTSLLKWQLPGTQQPGSAWPG*KSTRLS Trigger: AGAGAGCCTCGTGGACTTCCATCCTGGCCAAGCAGA...CCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGATGTCATCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | GAACAGGATGCCAATAAAGTTGGCCTCCAGGGCTTTCTCACTAAGCTACACTCCAGAGCCCCCTCTGCTTaGCCAGGATGGAAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EQDANKVGLQGFLTKLHSRAPSA*PGWKST Trigger: CGTGGACTTCCATCCTGGCCAAGCAGAGGGGGCTCT...GGAGTGTAGCTTAGTGAGAAAGCCCTGGAGGCCAACTTTATTGGCATCCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCAGAGGGGAGGAGAGCGCCAGGGTAAAGAGGACAGACAAAAGAAAGACGTCTCAAACTCATTTTaGGGGTCCAGGATGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REQRGGERQGKEDRQKKDVSNSF*GSRMSR Trigger: CCTGCTCATCCTGGACCCGCAAAATGAGTTTGAGAC...GTCTTTCTTTTGTCTGTCCTCTTTACCCTGGCGCTCTCCTCCCCTCTGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR GCA 90 bp | TCCTTTAGCATCCTGGCCACTCCTCCCCAGGTCACTTGCCACTCTGCAATAAATTCCCCCTCCAGTAACTaGTCCCGGATCAGTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSILATPPQVTCHSAINSPSSN*SRISMS Trigger: GCTCATACTGATCCGGGAGCAGTTACTGGAGGGGGA...ATTTATTGCAGAGTGGCAAGTGACCTGGGGAGGAGTGGCCAGGATGCTAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCTTTCTTTGGTCCCTTGCCCTTGATGAGAACTACACACACCAGATGGTCCACCACCTCCCAGTaGGCTTCGCAGCCATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: REAFFGPLPLMRTTHTRWSTTSQ*ASQPLG Trigger: ACCCAATGGCTGCGAAGCCCACTGGGAGGTGGTGGA...CCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| 3UTR CAA 72 bp | CCTGGACCCAGAGAAGCTTTCTTTGGTCCCTTGCCCTaGATGAGAACTACACACACCAGATGGGAACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPREAFFGPLP*MRTTHTRWEHG Trigger: GCCATGTTCCCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCTGGGTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGACAGCAGGAGCCACACACGCCTCTGGCAAAGGAAGAAAAGGGACAGGCGGAAGGCAAAGAACTaGGGCTTGATACTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKDSRSHTRLWQRKKRDRRKAKN*GLILCS Trigger: AGAGCAGAGTATCAAGCCTCAGTTCTTTGCCTTCCG...CCTGTCCCTTTTCTTCCTTTGCCAGAGGCGTGTGTGGCTCCTGCTGTCTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTGTCCCCAAAACAAGGGTGTGGAGCAAGCGCAGTGGCTGCTCTTCCAATTGGCAATGCCAGGCTaGATAATCATCTCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCPQNKGVEQAQWLLFQLAMPG*IIISLR Trigger: CCTGAGAGAGATGATTATCCAGCCTGGCATTGCCAA...TTGGAAGAGCAGCCACTGCGCTTGCTCCACACCCTTGTTTTGGGGACACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR CCA 90 bp | CACCGGACAGGGACAAACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGCCTTATCCTTCAAGGTaGAGTACACCTTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTGTNGGPRTGSHSALLPYPSR*STPFPS Trigger: AGATGGAAAAGGTGTACTCCACCTTGAAGGATAAGG...CAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGTTTGTCCCTGTCCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATGACATCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGTTTCCATCTTGTAGGTaGTACCGCACTGGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEMTSLLKWQLPGTQQPGFPSCR*YRTGSH Trigger: ATGACTCCCAGTGCGGTATCACCTACAAGATGGAAA...CCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGATGTCATCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR TCA 90 bp | TCACTCCTGAAATGGCAACTCCCAGGCACACAGCAGCCAGGGTATCTTACTCTCCAAAGAACTGAGGCTTaGTACTCTGCTCTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLKWQLPGTQQPGYLTLQRTEA*YSALAA Trigger: AGCTGCAAGAGCAGAGTATCAAGCCTCAGTTCTTTG...GAGAGTAAGATACCCTGGCTGCTGTGTGCCTGGGAGTTGCCATTTCAGGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | CAGCCCCAAAGTCAGAAGATAGATCAAGCACATGACCAGGAAGGCCAGCACCTCTTTGGGTTCAGAGGATaGTCCTCAAAGGTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: QPQSQKIDQAHDQEGQHLFGFRG*SSKVTS Trigger: GGATGTGACCTTTGAGGACCATCCTCTGAACCCAAA...GAGGTGCTGGCCTTCCTGGTCATGTGCTTGATCTATCTTCTGACTTTGGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | CCAGGACTCAGGGAAGATGAAAGCACAGGGGTGAGGAGCTACTGGGCAGAGGCATACTCAGTGGCTCTTTaGAAGAAAGATATATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLREDESTGVRSYWAEAYSVAL*KKDISG Trigger: CCCAGATATATCTTTCTTCCAAAGAGCCACTGAGTA...TGCCTCTGCCCAGTAGCTCCTCACCCCTGTGCTTTCATCTTCCCTGAGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | TTTCTCACAGGCTCCTTTGTGTCCCCAAAACAAGGGTGTGGAGCAAGCGCAGTGGGCAGGGGTACTCAGTaGCTCTTTGGAAGAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLTGSFVSPKQGCGASAVGRGTQ*LFGRKI Trigger: TATCTTTCTTCCAAAGAGCCACTGAGTACCCCTGCC...CACTGCGCTTGCTCCACACCCTTGTTTTGGGGACACAAAGGAGCCTGTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCTTTCTTTGGTCCCTTGCCCTTGATGAGAACTACACACACCAGATGGGGCGCACTGTTCTTGTaGGGGGAGCTCATATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: REAFFGPLPLMRTTHTRWGALFL*GELIFV Trigger: TACAAATATGAGCTCCCCGCACAAGAACAGTGCGCC...CCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCTTTCTTTGGTCCCTTGCCCTTGATGAGAACTACACACACCAGATGGTCCTTCAGGACATCCTaGAAATCTGCAATCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REAFFGPLPLMRTTHTRWSFRTS*KSAIRL Trigger: GAGCCGGATTGCAGATTTCCAGGATGTCCTGAAGGA...CCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | TCCTTTAGCATCCTGGCCACTCCTCCCCAGGTCACTTGCCACTCTGCAATAAATACATCTTTGTCAATCTaGAGTAGCACCTCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSILATPPQVTCHSAINTSLSI*SSTSLS Trigger: GGACAACGAGGTGCTACTCCAGATTGACAAAGATGT...ATTTATTGCAGAGTGGCAAGTGACCTGGGGAGGAGTGGCCAGGATGCTAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | TCCTTTAGCATCCTGGCCACTCCTCCCCAGGTCACTTGCCACTCTGCAATAAATGAAGAAAGATATATCTaGGCACAACCTCCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SFSILATPPQVTCHSAINEERYI*AQPPDI Trigger: GATGTCAGGAGGTTGTGCCCAGATATATCTTTCTTC...ATTTATTGCAGAGTGGCAAGTGACCTGGGGAGGAGTGGCCAGGATGCTAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCTTTCTTTGGTCCCTTGCCCTTGATGAGAACTACACACACCAGATGGAGTCTTGGAGTTCCTTaGCTTTCTGTAGGATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: REAFFGPLPLMRTTHTRWSLGVP*LSVGSG Trigger: GCCAGATCCTACAGAAAGCCAAGGAACTCCAAGACT...CCATCTGGTGTGTGTAGTTCTCATCAAGGGCAAGGGACCAAAGAAAGCTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR TCA 90 bp | GCCTGTGTCCAAATAAATAGTAAAATACGTCCCAGGTGTTGTGTATTGAGAGAGAGGTCACATCCTCCCTaGATACACCCATGTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACVQINSKIRPRCCVLRERSHPP*IHPCWP Trigger: AGGCCAACATGGGTGTATTCAGGGAGGATGTGACCT...CTCTCTCAATACACAACACCTGGGACGTATTTTACTATTTATTTGGACACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGGTACTGGGGATTCCTGCTCTGACATAGAGGACCTGGAGGCCTCAGGCTGCAGAAGCCGCATGTaGACAGTGAAGTCCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGTGDSCSDIEDLEASGCRSRM*TVKSPS Trigger: GGAGGGGGACTTCACTGTCAACATGCGGCTTCTGCA...GCCTGAGGCCTCCAGGTCCTCTATGTCAGAGCAGGAATCCCCAGTACCTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GAGCTCCCGGGAGCTGCAGGAGCTCAGGCTCGGGGTTCCCCCTTAAGAATCAAGGGTCTCAAACTCATTTaGCGGGTCCAGGATGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELPGAAGAQARGSPLRIKGLKLI*RVQDEQ Trigger: CTGCTCATCCTGGACCCGCAAAATGAGTTTGAGACC...CTTGATTCTTAAGGGGGAACCCCGAGCCTGAGCTCCTGCAGCTCCCGGGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CACCGGACAGGGACAAACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGTGGGCTTCGCAGCCATaGGGTAGCACCTCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HRTGTNGGPRTGSHSALLWASQP*GSTSYS Trigger: CGAGTATGAGGTGCTACCCAATGGCTGCGAAGCCCA...CAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGTTTGTCCCTGTCCGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 90 bp | TCTCTCTCAGGAACTGCGAATAGAGCCCCCTCTGCTTGGCCAGGATaGAAGTCCACGAGGCTCTCTCCAGAGGGAGGTAGTTCAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSGTANRAPSAWPG*KSTRLSPEGGSSGG Trigger: TCCTCCTGAACTACCTCCCTCTGGAGAGAGCCTCGTGGACTTCCATCCTGGCCAAGCAGAGGGGGCTCTATTCGCAGTTCCTGAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 90 bp | GGGGAGCTCATATTTGTAACCCCGCTTCGATTCCTGGCCACCGTCTaGGACTTCAGTGTCGTCTGCTCCACCCGCTTACGAAGGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GELIFVTPLRFLATV*DFSVVCSTRLRRVS Trigger: TGAGACCCTTCGTAAGCGGGTGGAGCAGACGACACTGAAGTCTCAGACGGTGGCCAGGAATCGAAGCGGGGTTACAAATATGAGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS GCA 90 bp | GGTAGCACCTCATACTCGTTCAGGGCTGATGGCGCACTGTTCTTGTaGGGGGAGCTCATATTTGTAACCCCGCTTCGATTCCTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSTSYSFRADGALFL*GELIFVTPLRFLAT Trigger: GGTGGCCAGGAATCGAAGCGGGGTTACAAATATGAGCTCCCCGCACAAGAACAGTGCGCCATCAGCCCTGAACGAGTATGAGGTGCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS GCA 90 bp | TCCTGCAGAAGCCGCATGTTGACAGTGAAGTCCCCCTCCAGTAACTaGTCCCGGATCAGTATGAGCATAGCACAGCAGACCAGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRSRMLTVKSPSSN*SRISMSIAQQTRRR Trigger: CCTCCTCCTGGTCTGCTGTGCTATGCTCATACTGATCCGGGAGCAGTTACTGGAGGGGGACTTCACTGTCAACATGCGGCTTCTGCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CACCGGACAGGGACAAACGGTGGCCCTAGAACTGGCAGTCACTCAGCTCTTCTGAGGCTCTTGATGAAGTaGTCCCGGATCTCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HRTGTNGGPRTGSHSALLRLLMK*SRISAM Trigger: CATGGCTGAGATCCGGGACAACTTCATCAAGAGCCT...CAGAAGAGCTGAGTGACTGCCAGTTCTAGGGCCACCGTTTGTCCCTGTCCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CCTTTGTGTCCCCAAAACAAGGGTGTGGAGCAAGCGCAGTGGCTGCTCTTCCAACTGAATACACCCATGTaGGCCTTGGCAATGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCPQNKGVEQAQWLLFQLNTPM*ALAMPG Trigger: GCCTGGCATTGCCAAGGCCAACATGGGTGTATTCAG...TTGGAAGAGCAGCCACTGCGCTTGCTCCACACCCTTGTTTTGGGGACACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CTCCATGTCCTTGGCCTTCATCTCAAGGACCAAGTGGTGGGCACAGGATGCAGGGATGGCGCACTGTTCTaGTGCGGGGAGCTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: LHVLGLHLKDQVVGTGCRDGALF*CGELIF Trigger: AAATATGAGCTCCCCGCACAAGAACAGTGCGCCATC...CCTGCATCCTGTGCCCACCACTTGGTCCTTGAGATGAAGGCCAAGGACATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 90 bp | AATCGAATCGGTTGCCATCAGCAAAGAGGGAGTCCCAGATACGGATaGCATCAGGCAGCAAGAACTCCTGGGACAGCAGCAATGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRIGCHQQRGSPRYG*HQAARTPGTAAMSA Trigger: GGCTGACATTGCTGCTGTCCCAGGAGTTCTTGCTGCCTGATGTCATCCGTATCTGGGACTCCCTCTTTGCTGATGGCAACCGATTCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGCACTCAACCCAACCTGGCTAAAGCAATGGCCTGGGAAGGAGGCAGCGTACTCAGTGGCTCTTaGGAAGAAAGATATATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSTQPNLAKAMAWEGGSVLSGS*EERYIW Trigger: CCAGATATATCTTTCTTCCAAAGAGCCACTGAGTAC...GCTGCCTCCTTCCCAGGCCATTGCTTTAGCCAGGTTGGGTTGAGTGCTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GAGGTAGACACAGAGGGGAAGCAGGGCCTTAGAGGGTTCCCACATACCCTCACCATCTCAGCCATGAGGTaGGTGAAGCAGAAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EVDTEGKQGLRGFPHTLTISAMR*VKQKKV Trigger: TACCTTTTTCTGCTTCACCAACCTCATGGCTGAGAT...GGTGAGGGTATGTGGGAACCCTCTAAGGCCCTGCTTCCCCTCTGTGTCTACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GAACAGGATGCCAATAAAGTTGGCCTCCAGGGCTTTCTCACTAAGCTACACTCCACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: EQDANKVGLQGFLTKLHSTPMLA*AMPGWI Trigger: TATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGT...GGAGTGTAGCTTAGTGAGAAAGCCCTGGAGGCCAACTTTATTGGCATCCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | AAGAAAGACAGCAGGAGCCACACACGCCTCTGGCAAAGGAAGAAAAGGGACAGGGAGTCTTGGAGTTCCTaGGCTTTCTGTAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKDSRSHTRLWQRKKRDRESWSS*AFCRIW Trigger: CCAGATCCTACAGAAAGCCAAGGAACTCCAAGACTC...CCTGTCCCTTTTCTTCCTTTGCCAGAGGCGTGTGTGGCTCCTGCTGTCTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 90 bp | CCACCCGCTTACGAAGGGTCTCAAACTCATTTTGCGGGTCCAGGATaGGCAGGCAGGGGTACTCAGTGGCTCTTTGGAAGAAAGATATAT | + |
|
Preference number: 5 (lower is better) Translates to: PPAYEGSQTHFAGPG*AGRGTQWLFGRKIY Trigger: ATATATCTTTCTTCCAAAGAGCCACTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAAATGAGTTTGAGACCCTTCGTAAGCGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | CAGCCCCAAAGTCAGAAGATAGATCAAGCACATGACCAGGAAGGCCAGCACCTCAACCTCCTGACATCTTaGTCAATCTGGAGTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QPQSQKIDQAHDQEGQHLNLLTS*SIWSST Trigger: GGTGCTACTCCAGATTGACAAAGATGTCAGGAGGTT...GAGGTGCTGGCCTTCCTGGTCATGTGCTTGATCTATCTTCTGACTTTGGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 90 bp | TTTTGCGGGTCCAGGATGAGCAGGCAGGGGTACTCAGTGGCTCTTTaGAAGAAAGATATATCTGGGCACAACCTCCTGACATCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCGSRMSRQGYSVAL*KKDISGHNLLTSLS Trigger: TGACAAAGATGTCAGGAGGTTGTGCCCAGATATATCTTTCTTCCAAAGAGCCACTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | AGGGAGCAGAGGGGAGGAGAGCGCCAGGGTAAAGAGGACAGACAAAAGAAAGACTGGAGTAGCACCTCGTaGTCCTTAAAATATGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: REQRGGERQGKEDRQKKDWSSTS*SLKYVF Trigger: GAACACATATTTTAAGGACAACGAGGTGCTACTCCA...GTCTTTCTTTTGTCTGTCCTCTTTACCCTGGCGCTCTCCTCCCCTCTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GATGCAGGTCTCCCACAGAAACAAATCAGATGCAGTGATTCCAGTAGCATGGTCGAGTCATCCAGGCTCTaGATGAAGTTGTCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DAGLPQKQIRCSDSSSMVESSRL*MKLSRI Trigger: GATCCGGGACAACTTCATCAAGAGCCTGGATGACTC...GACCATGCTACTGGAATCACTGCATCTGATTTGTTTCTGTGGGAGACCTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS-3UTR CAA 90 bp | GCCTGTGTCCAAATAAATAGTAAAATACGTCCCAGGTGTTGTGTATTGAGAGAGACCTGCTGTCAGGGTTaGGGTTCAGAGGATGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ACVQINSKIRPRCCVLRETCCQG*GSEDGP Trigger: AGGACCATCCTCTGAACCCAAACCCTGACAGCAGGT...CTCTCTCAATACACAACACCTGGGACGTATTTTACTATTTATTTGGACACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | TGCGCTCCACCACCTCCCAGTGGGCTTCGCAGCCATTaGGTAGCACCTCATACTCGTTCAGGGCTGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CAPPPPSGLRSH*VAPHTRSGLMA Trigger: CGCCATCAGCCCTGAACGAGTATGAGGTGCTACCCAATGGCTGCGAAGCCCACTGGGAGGTGGTGGAGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | ATGCGCTCCACCACCTCCCAGTGGGCTTCGCAGCCATaGGGTAGCACCTCATACTCGTTCAGGGCTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: MRSTTSQWASQP*GSTSYSFRADG Trigger: GCCATCAGCCCTGAACGAGTATGAGGTGCTACCCAATGGCTGCGAAGCCCACTGGGAGGTGGTGGAGCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | GGAACTGCGAATAGAGCCCCCTCTGCTTGGCCAGGATaGAAGTCCACGAGGCTCTCTCCAGAGGGAGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GTANRAPSAWPG*KSTRLSPEGGS Trigger: ACTACCTCCCTCTGGAGAGAGCCTCGTGGACTTCCATCCTGGCCAAGCAGAGGGGGCTCTATTCGCAGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | ATGAACAGGATGCGCTCCACCACCTCCCAGTGGGCTTCGCAGCCATaGGGTAGCACCTCATACTCGTTCAGGGCTGATGGCGCACTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: MNRMRSTTSQWASQP*GSTSYSFRADGALF Trigger: GAACAGTGCGCCATCAGCCCTGAACGAGTATGAGGTGCTACCCAATGGCTGCGAAGCCCACTGGGAGGTGGTGGAGCGCATCCTGTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | TCTCTCTCAGGAACTGCGAATAGAGCCCCCTCTGCTTaGCCAGGATGGAAGTCCACGAGGCTCTCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSGTANRAPSA*PGWKSTRLSPE Trigger: CTCTGGAGAGAGCCTCGTGGACTTCCATCCTGGCCAAGCAGAGGGGGCTCTATTCGCAGTTCCTGAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | CAGTGTCGTCTGCTCCACCCGCTTACGAAGGGTCTCAAACTCATTTaGCGGGTCCAGGATGAGCAGGCAGGGGTACTCAGTGGCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QCRLLHPLTKGLKLI*RVQDEQAGVLSGSL Trigger: CAAAGAGCCACTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAAATGAGTTTGAGACCCTTCGTAAGCGGGTGGAGCAGACGACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | CTGCTCCACCCGCTTACGAAGGGTCTCAAACTCATTTaGCGGGTCCAGGATGAGCAGGCAGGGGTACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLHPLTKGLKLI*RVQDEQAGVLS Trigger: ACTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAAATGAGTTTGAGACCCTTCGTAAGCGGGTGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | TTGGGTAGCACCTCATACTCGTTCAGGGCTGATGGCGCACTGTTCTaGTGCGGGGAGCTCATATTTGTAACCCCGCTTCGATTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTSYSFRADGALF*CGELIFVTPLRFLA Trigger: GGCCAGGAATCGAAGCGGGGTTACAAATATGAGCTCCCCGCACAAGAACAGTGCGCCATCAGCCCTGAACGAGTATGAGGTGCTACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 72 bp | GGTTGCCATCAGCAAAGAGGGAGTCCCAGATACGGATaGCATCAGGCAGCAAGAACTCCTGGGACAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCHQQRGSPRYG*HQAARTPGTAA Trigger: TGCTGCTGTCCCAGGAGTTCTTGCTGCCTGATGTCATCCGTATCTGGGACTCCCTCTTTGCTGATGGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS GCA 72 bp | AGCCGCATGTTGACAGTGAAGTCCCCCTCCAGTAACTaGTCCCGGATCAGTATGAGCATAGCACAGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRMLTVKSPSSN*SRISMSIAQQT Trigger: GGTCTGCTGTGCTATGCTCATACTGATCCGGGAGCAGTTACTGGAGGGGGACTTCACTGTCAACATGCGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 72 bp | GGTTCAGAGGATGGTCCTCAAAGGTCACATCCTCCCTaGATACACCCATGTTGGCCTTGGCAATGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSEDGPQRSHPP*IHPCWPWQCQA Trigger: AGCCTGGCATTGCCAAGGCCAACATGGGTGTATTCAGGGAGGATGTGACCTTTGAGGACCATCCTCTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 72 bp | ATATTTGTAACCCCGCTTCGATTCCTGGCCACCGTCTaGGACTTCAGTGTCGTCTGCTCCACCCGCTTACGA | + |
|
Preference number: 6 (lower is better) Translates to: IFVTPLRFLATV*DFSVVCSTRLR Trigger: TCGTAAGCGGGTGGAGCAGACGACACTGAAGTCTCAGACGGTGGCCAGGAATCGAAGCGGGGTTACAAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | ACCTCATACTCGTTCAGGGCTGATGGCGCACTGTTCTaGTGCGGGGAGCTCATATTTGTAACCCCGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSYSFRADGALF*CGELIFVTPLR Trigger: TCGAAGCGGGGTTACAAATATGAGCTCCCCGCACAAGAACAGTGCGCCATCAGCCCTGAACGAGTATGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | ATACCGCACTGGGAGTCATCCAGGCTCTTGATGAAGTaGTCCCGGATCTCAGCCATGAGGTTGGTGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPHWESSRLLMK*SRISAMRLVKQ Trigger: CTGCTTCACCAACCTCATGGCTGAGATCCGGGACAACTTCATCAAGAGCCTGGATGACTCCCAGTGCGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
||
| CDS TCA 72 bp | TACGAAGGGTCTCAAACTCATTTTGCGGGTCCAGGATaGGCAGGCAGGGGTACTCAGTGGCTCTTTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: YEGSQTHFAGPG*AGRGTQWLFGR Trigger: TCTTCCAAAGAGCCACTGAGTACCCCTGCCTGCTCATCCTGGACCCGCAAAATGAGTTTGAGACCCTTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS GCA 72 bp | TCATACTCGTTCAGGGCTGATGGCGCACTGTTCTTGTaGGGGGAGCTCATATTTGTAACCCCGCTTCGATTC | + |
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Preference number: 6 (lower is better) Translates to: SYSFRADGALFL*GELIFVTPLRF Trigger: GAATCGAAGCGGGGTTACAAATATGAGCTCCCCGCACAAGAACAGTGCGCCATCAGCCCTGAACGAGTATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | ATAGCACAGCAGACCAGGAGGAGGAAATCGAATCGGTaGCCATCAGCAAAGAGGGAGTCCCAGATACGGATG | + |
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Preference number: 6 (lower is better) Translates to: IAQQTRRRKSNR*PSAKRESQIRM Trigger: CATCCGTATCTGGGACTCCCTCTTTGCTGATGGCAACCGATTCGATTTCCTCCTCCTGGTCTGCTGTGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | AGTATGAGCATAGCACAGCAGACCAGGAGGAGGAAATCGAATCGGTaGCCATCAGCAAAGAGGGAGTCCCAGATACGGATGACATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SMSIAQQTRRRKSNR*PSAKRESQIRMTSG Trigger: GCCTGATGTCATCCGTATCTGGGACTCCCTCTTTGCTGATGGCAACCGATTCGATTTCCTCCTCCTGGTCTGCTGTGCTATGCTCATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | TGGTCCTCAAAGGTCACATCCTCCCTGAATACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATAATCATCTCTCTCAGGAACTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: WSSKVTSSLNTPMLA*AMPGWIIISLRNCE Trigger: TTCGCAGTTCCTGAGAGAGATGATTATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTATTCAGGGAGGATGTGACCTTTGAGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | AGAGGATGGTCCTCAAAGGTCACATCCTCCCTGAATACACCCATGTaGGCCTTGGCAATGCCAGGCTGGATAATCATCTCTCTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RGWSSKVTSSLNTPM*ALAMPGWIIISLRN Trigger: GTTCCTGAGAGAGATGATTATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTATTCAGGGAGGATGTGACCTTTGAGGACCATCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | TCCAGGATGAGCAGGCAGGGGTACTCAGTGGCTCTTTaGAAGAAAGATATATCTGGGCACAACCTCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SRMSRQGYSVAL*KKDISGHNLLT Trigger: TGTCAGGAGGTTGTGCCCAGATATATCTTTCTTCCAAAGAGCCACTGAGTACCCCTGCCTGCTCATCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 72 bp | AAGGTCACATCCTCCCTGAATACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATAATCATCTCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KVTSSLNTPMLA*AMPGWIIISLR Trigger: CCTGAGAGAGATGATTATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTATTCAGGGAGGATGTGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CAA 90 bp | TCATCCAGGCTCTTGATGAAGTTGTCCCGGATCTCAGCCATGAGGTaGGTGAAGCAGAAAAAGGTATCTGCTTCAGCGTGCTCTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSRLLMKLSRISAMR*VKQKKVSASACSFH Trigger: GTGGAAAGAGCACGCTGAAGCAGATACCTTTTTCTGCTTCACCAACCTCATGGCTGAGATCCGGGACAACTTCATCAAGAGCCTGGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS TCA 72 bp | GCAATGTCAGCCATCGGAAGGCAAAGAACTGAGGCTTaGTACTCTGCTCTTGCAGCTTCAGGTAGAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: AMSAIGRQRTEA*YSALAASGRAL Trigger: TAGAGCTCTACCTGAAGCTGCAAGAGCAGAGTATCAAGCCTCAGTTCTTTGCCTTCCGATGGCTGACATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS GCA 72 bp | GCCTCCACACCACTCCAGAATGGGAAGGCCAACTTCTaGAATGCACTAAAACTGAGTTCTCGAAGCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASTPLQNGKANF*NALKLSSRSFS Trigger: GGAAAAGCTTCGAGAACTCAGTTTTAGTGCATTGCAGAAGTTGGCCTTCCCATTCTGGAGTGGTGTGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136183.8 |
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| CDS CAA 72 bp | CTCTTGATGAAGTTGTCCCGGATCTCAGCCATGAGGTaGGTGAAGCAGAAAAAGGTATCTGCTTCAGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLMKLSRISAMR*VKQKKVSASAC Trigger: GCACGCTGAAGCAGATACCTTTTTCTGCTTCACCAACCTCATGGCTGAGATCCGGGACAACTTCATCAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | GTCCTTAAAATATGTGTTCCACCTGCTGTCAGGGTTTaGGTTCAGAGGATGGTCCTCAAAGGTCACATCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLKICVPPAVRV*VQRMVLKGHIL Trigger: GAGGATGTGACCTTTGAGGACCATCCTCTGAACCCAAACCCTGACAGCAGGTGGAACACATATTTTAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | GGGGTACTCAGTGGCTCTTTGGAAGAAAGATATATCTaGGCACAACCTCCTGACATCTTTGTCAATCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GVLSGSLEERYI*AQPPDIFVNLE Trigger: CTCCAGATTGACAAAGATGTCAGGAGGTTGTGCCCAGATATATCTTTCTTCCAAAGAGCCACTGAGTACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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| CDS CCA 72 bp | ATATCTGGGCACAACCTCCTGACATCTTTGTCAATCTaGAGTAGCACCTCGTTGTCCTTAAAATATGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ISGHNLLTSLSI*SSTSLSLKYVF Trigger: GAACACATATTTTAAGGACAACGAGGTGCTACTCCAGATTGACAAAGATGTCAGGAGGTTGTGCCCAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044556.12 |
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