Pregenerated sensors for TBC1D12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048720Ensembl transcript IDs: ENSMUST00000037302.6, ENSMUST00000235558.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCCTATGACAGGAGTTAATTCTACAGGGTTCCTGAGGCTAGAATaGTCAACCCATAGGGTAAAAATATATGCACTTCCTCTGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: APMTGVNSTGFLRLE*STHRVKIYALPLVP Trigger: TGGGACCAGAGGAAGTGCATATATTTTTACCCTATGGGTTGATCATTCTAGCCTCAGGAACCCTGTAGAATTAACTCCTGTCATAGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR CCA 90 bp | TTATTAATACTGTCAATAAATTACGCGTTTCATTTACTTCAGCCGTaGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LLILSINYAFHLLQP*NLNPEVFPGPDSSL Trigger: GAGAGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAAATGAAACGCGTAATTTATTGACAGTATTAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR CAA 90 bp | CAAGGCAGGCAAGAGCTCCAGTGGCGGACGGAACTTACGACTCAGTaGCTTACTACTGGTCTAGAATATCTTCCCAAGCTCAGAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: QGRQELQWRTELTTQ*LTTGLEYLPKLRTG Trigger: TCCAGTTCTGAGCTTGGGAAGATATTCTAGACCAGTAGTAAGCAACTGAGTCGTAAGTTCCGTCCGCCACTGGAGCTCTTGCCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCCTAAGCCTTTTCCTCTaGAAAATGGCTCTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: KSRPSNINSMRLLPEVMCLSLFL*KMALHR Trigger: CCTGTGGAGAGCCATTTTTCAGAGGAAAAGGCTTAG...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTTTAGCAATCCTATTCTaGCTCCAGAAGTGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: FNEITPGGYVPFMRDTNILAILF*LQKCIC Trigger: ACAAATGCACTTCTGGAGTCAGAATAGGATTGCTAA...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| 3UTR-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTTTCAGTCCTCTAAAGTaGAAAAAGATCTTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FNEITPGGYVPFMRDTNIFSPLK*KKIFLS Trigger: AGAAAGGAAGATCTTTTTGCACTTTAGAGGACTGAA...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| 3UTR-3UTR CCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCCATTTACTTCAGCCGTaGAATTTAAACCCAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: KSRPSNINSMRLLPEVMCHLLQP*NLNPEV Trigger: AACTTCTGGGTTTAAATTCCACGGCTGAAGTAAATG...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| 3UTR GCA 72 bp | GTGTTCCAGTTCTCGAGGATGCGGACCTCCCTGGCCTaGGAGCAAGGCAGGCAAGAGCTCCAGTGGCGGACG | + |
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Preference number: 3 (lower is better) Translates to: VFQFSRMRTSLA*EQGRQELQWRT Trigger: CGTCCGCCACTGGAGCTCTTGCCTGCCTTGCTCGCAGGCCAGGGAGGTCCGCATCCTCGAGAACTGGAACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR CCA 72 bp | GTGGCGGACGGAACTTACGACTCAGTTGCTTACTACTaGTCTAGAATATCTTCCCAAGCTCAGAACTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VADGTYDSVAYY*SRISSQAQNWR Trigger: TCTCCAGTTCTGAGCTTGGGAAGATATTCTAGACCAGTAGTAAGCAACTGAGTCGTAAGTTCCGTCCGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR CCA 72 bp | ATGGATGGATGGATGGATGGATGGATGGATGCTGTGTaGGGTCACATGACTAATCACATTATTGCCTATTTA | + |
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Preference number: 3 (lower is better) Translates to: MDGWMDGWMDAV*GHMTNHIIAYL Trigger: TAAATAGGCAATAATGTGATTAGTCATGTGACCCCACACAGCATCCATCCATCCATCCATCCATCCATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| 3UTR TCA 72 bp | ACAGGAGTTAATTCTACAGGGTTCCTGAGGCTAGAATaGTCAACCCATAGGGTAAAAATATATGCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TGVNSTGFLRLE*STHRVKIYALP Trigger: AGGAAGTGCATATATTTTTACCCTATGGGTTGATCATTCTAGCCTCAGGAACCCTGTAGAATTAACTCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| 3UTR CCA 72 bp | CTGTCAATAAATTACGCGTTTCATTTACTTCAGCCGTaGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGAT | + |
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Preference number: 3 (lower is better) Translates to: LSINYAFHLLQP*NLNPEVFPGPD Trigger: ATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAAATGAAACGCGTAATTTATTGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTCCGTTGGTCATGCCTaGGCCGCGCGCCGCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSSVGHA*AARRGD Trigger: GTCCCCGCGGCGCGCGGCTCAGGCATGACCAACGGA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTAGGTCGCCGGCGCTCTaGCGGCGGCTCACCTCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSRSPAL*RRLTSN Trigger: GTTCGAGGTGAGCCGCCGTCAGAGCGCCGGCGACCT...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTCCCGGGACCCTGCTCTaGCGCTGGCAAGGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSPGTLL*RWQGCG Trigger: TCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGG...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGTGCCCCCGGGACCCTaGTCTGCCGCTGGCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSVPPGP*SAAGKG Trigger: ACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCAC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTTCCGTTGGTCATGCCTaGGCCGCGCGCCGCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNISVGHA*AARRGD Trigger: GTCCCCGCGGCGCGCGGCTCAGGCATGACCAACGGA...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTCCCGGGACCCTGCTCTaGCGCTGGCAAGGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIPGTLL*RWQGCG Trigger: TCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGG...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTGTGCCCCCGGGACCCTaGTCTGCCGCTGGCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIVPPGP*SAAGKG Trigger: ACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCAC...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR TCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCAGGTCGCCGGCGCTCTaGCGGCGGCTCACCTCGAAC | + |
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Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCRSPAL*RRLTSN Trigger: GTTCGAGGTGAGCCGCCGTCAGAGCGCCGGCGACCT...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGATTCGCGAACGCAATaGAGGCGTCTGCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSDSRTQ*RRLLPP Trigger: TGGAGGAAGCAGACGCCTTCATTGCGTTCGCGAATC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGTGCTATTCTGCATCTaGATGGCTGCGATGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSVLFCI*MAAMQL Trigger: CAGCTGCATCGCAGCCATTCAGATGCAGAATAGCAC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTCTAGGGGGCAATCCCTaGCACCACAATTCTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNILGGNP*HHNSRT Trigger: AGTTCGAGAATTGTGGTGGCAGGGATTGCCCCCTAG...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR CCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTCAGCCAGGAGCACTATaGACAACTGATTTGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSQPGAL*TTDLSS Trigger: GGAACTCAAATCAGTTGTCCATAGTGCTCCTGGCTG...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTGGCTGCGATGCAGCTaGAAAGCTTTTCTGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSWLRCS*KAFLML Trigger: TAACATCAGAAAAGCTTTTCAGCTGCATCGCAGCCA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCGTGCTATTCTGCATCTaGATGGCTGCGATGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCVLFCI*MAAMQL Trigger: CAGCTGCATCGCAGCCATTCAGATGCAGAATAGCAC...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTACAGATGCAAAGACCTaGGTCCATTTCTTGGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSTDAKT*VHFLVL Trigger: TAGCACCAAGAAATGGACTCAGGTCTTTGCATCTGT...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGCTTCGTACTCCTGCTaGATAATTTTGGAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSASYSC*IILEVF Trigger: GAAAACCTCCAAAATTATTCAGCAGGAGTACGAAGC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTCAGATCAAGTGGCAGTaGTTTGCTGTACAATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSQIKWQ*FAVQCE Trigger: TTCACATTGTACAGCAAATCACTGCCACTTGATCTG...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGAGTCCATTTCTTGGTaGTATTCTGCATCTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSESISW*YSASEW Trigger: CCATTCAGATGCAGAATAGCACCAAGAAATGGACTC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGTCCTTTGCTACAGATaGAAAGACCTGAGTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSVLCYR*KDLSPF Trigger: AAATGGACTCAGGTCTTTGCATCTGTAGCAAAGGAC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTCAGCCAGGAGCACTATaGACAACTGATTTGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIQPGAL*TTDLSS Trigger: GGAACTCAAATCAGTTGTCCATAGTGCTCCTGGCTG...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR CCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTCAAAACATCGTGATATaGGCCACCCTTCTGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSQNIVI*ATLLKD Trigger: ATCTTTCAGAAGGGTGGCCCATATCACGATGTTTTG...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR TCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTAGCACTATGGACAACTaGTTTGAGTTCCTTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNISTMDN*FEFLCP Trigger: AGGACAAAGGAACTCAAATCAGTTGTCCATAGTGCT...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR TCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTGCTTCGTACTCCTGCTaGATAATTTTGGAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIASYSC*IILEVF Trigger: GAAAACCTCCAAAATTATTCAGCAGGAGTACGAAGC...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGATCCAAATTACCATTaGACTTGCAATGCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSDPNYH*TCNAFF Trigger: GAAGAAAGCATTGCAAGTGCAATGGTAATTTGGATC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTGAGTCCATTTCTTGGTaGTATTCTGCATCTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIESISW*YSASEW Trigger: CCATTCAGATGCAGAATAGCACCAAGAAATGGACTC...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTTCTTTAATGTCCTTTaGTACAGATGCAAAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSFFNVL*YRCKDL Trigger: CAGGTCTTTGCATCTGTAGCAAAGGACATTAAAGAA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTCTGAAGATTTTCTCTaGGAGGGACTTTACCAAATA | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSSEDFL*EGLYQI Trigger: TATTTGGTAAAGTCCCTCCCAGAGAAAATCTTCAGA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CCA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTAAAGATGTAGAGAGATaGAAATGTACGGGATATGTC | + |
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Preference number: 4 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSKDVER*KCTGYV Trigger: GACATATCCCGTACATTTCCATCTCTCTACATCTTT...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTCAAAACATCGTGATATaGGCCACCCTTCTGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIQNIVI*ATLLKD Trigger: ATCTTTCAGAAGGGTGGCCCATATCACGATGTTTTG...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR TCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCCAGATCAAGTGGCAGTaGTTTGCTGTACAATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCQIKWQ*FAVQCE Trigger: TTCACATTGTACAGCAAATCACTGCCACTTGATCTG...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCGTCCTTTGCTACAGATaGAAAGACCTGAGTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCVLCYR*KDLSPF Trigger: AAATGGACTCAGGTCTTTGCATCTGTAGCAAAGGAC...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR CCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCATTCTCGAACTCTTCTaGTACTACGCATTACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCILELF*YYALLP Trigger: GGGAAGTAATGCGTAGTACCAGAAGAGTTCGAGAAT...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTTTCTTTAATGTCCTTTaGTACAGATGCAAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIFFNVL*YRCKDL Trigger: CAGGTCTTTGCATCTGTAGCAAAGGACATTAAAGAA...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR CCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTAAAGATGTAGAGAGATaGAAATGTACGGGATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIKDVER*KCTGYV Trigger: GACATATCCCGTACATTTCCATCTCTCTACATCTTT...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR GCA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTGCAATGCTTTCTTCCTaGTTAAATCGTTCTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FNEITPGGYVPFMRDTNIAMLSS*LNRSFI Trigger: AATGAAAGAACGATTTAAGCAGGAAGAAAGCATTGC...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR GCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCAATTACCATTGCACTTaGAATGCTTTCTTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCNYHCT*NAFFLL Trigger: AAGCAGGAAGAAAGCATTGCAAGTGCAATGGTAATT...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR CCA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCTCTGAAGATTTTCTCTaGGAGGGACTTTACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KSRPSNINSMRLLPEVMCSEDFL*EGLYQI Trigger: TATTTGGTAAAGTCCCTCCCAGAGAAAATCTTCAGA...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| 3UTR CAA 72 bp | GTATGTCCACTACTAACAGAAATGTGTGCTTCTATGTaGTTTCAAACCAAATTGCAACATCAGAACAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VCPLLTEMCASM*FQTKLQHQNSI Trigger: TATACTGTTCTGATGTTGCAATTTGGTTTGAAACAACATAGAAGCACACATTTCTGTTAGTAGTGGACATAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS GCA 90 bp | AAGCCACCGCTCCGTCGAGCCCGAGCCGTGGTGCCCCCGGGACCCTaGTCTGCCGCTGGCAAGGGTGCGGACGGCCCCGCTGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPLRRARAVVPPGP*SAAGKGADGPAEGR Trigger: CCTGCCCTCAGCGGGGCCGTCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCACCACGGCTCGGGCTCGACGGAGCGGTGGCTT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS CCA 90 bp | CGAACGTGTTCCGAGAGCCGAAGCGGGCGTCGGGGAGGCCGAGGCTaGGCTCCGCGCTCTCGACGGCCCTCCCGGCAGGGGTGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTCSESRSGRRGGRG*APRSRRPSRQGWRL Trigger: CAGCCGCCACCCCTGCCGGGAGGGCCGTCGAGAGCGCGGAGCCCAGCCTCGGCCTCCCCGACGCCCGCTTCGGCTCTCGGAACACGTTCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS TCA 90 bp | CCCGGGACCCTGCTCTGCCGCTGGCAAGGGTGCGGACGGCCCCGCTaGGGGCAGGAGGTCGCCGGCGCTCTGACGGCGGCTCACCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGTLLCRWQGCGRPR*GQEVAGALTAAHLE Trigger: TTCGAGGTGAGCCGCCGTCAGAGCGCCGGCGACCTCCTGCCCTCAGCGGGGCCGTCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS TCA 90 bp | AAGGGTGCGGACGGCCCCGCTGAGGGCAGGAGGTCGCCGGCGCTCTaGCGGCGGCTCACCTCGAACGTGTTCCGAGAGCCGAAGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KGADGPAEGRRSPAL*RRLTSNVFREPKRA Trigger: CGCCCGCTTCGGCTCTCGGAACACGTTCGAGGTGAGCCGCCGTCAGAGCGCCGGCGACCTCCTGCCCTCAGCGGGGCCGTCCGCACCCTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS GCA 90 bp | CGAAGAAATCCGCGAAGCCACCGCTCCGTCGAGCCCGAGCCGTGGTaGCCCCGGGACCCTGCTCTGCCGCTGGCAAGGGTGCGGACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRNPRSHRSVEPEPW*PRDPALPLARVRTA Trigger: GGCCGTCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCACCACGGCTCGGGCTCGACGGAGCGGTGGCTTCGCGGATTTCTTCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS CCA 90 bp | GGTGGCCGGGACGGTCTTCCCGTCCTGACCCATGGGCCCCGGGACTaGGAGCAGCTCGGCGTTCCTTCCCGAGCAGGCTCCGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGRDGLPVLTHGPRD*EQLGVPSRAGSGIL Trigger: GAGGATGCCGGAGCCTGCTCGGGAAGGAACGCCGAGCTGCTCCCAGTCCCGGGGCCCATGGGTCAGGACGGGAAGACCGTCCCGGCCACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS CCA 90 bp | TGGCGAAGAAATCCGCGAAGCCACCGCTCCGTCGAGCCCGAGCCGTaGTGCCCCCGGGACCCTGCTCTGCCGCTGGCAAGGGTGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: WRRNPRSHRSVEPEP*CPRDPALPLARVRT Trigger: CGTCCGCACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCACCACGGCTCGGGCTCGACGGAGCGGTGGCTTCGCGGATTTCTTCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 90 bp | CCGCAGGTTCGGCGGCGACGTGCCTCCTCTGGGCCGCGACGGTCCTaGCGCAGCAAAAAGCCCGAGTCTCCGTTGGTCATGCCTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQVRRRRASSGPRRS*RSKKPESPLVMPEP Trigger: CGGCTCAGGCATGACCAACGGAGACTCGGGCTTTTTGCTGCGCCAGGACCGTCGCGGCCCAGAGGAGGCACGTCGCCGCCGAACCTGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 90 bp | GTGGTAGAAAGTGGCTCCAGCGCAAAGCTCTTGCGTCGTGAAGACTaGGGGGCTGCTTTACAGGTCCTCCCTGTGCGAGCTTCGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVESGSSAKLLRRED*GAALQVLPVRASYS Trigger: GGAGTACGAAGCTCGCACAGGGAGGACCTGTAAAGCAGCCCCCCAGTCTTCACGACGCAAGAGCTTTGCGCTGGAGCCACTTTCTACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS-3UTR CAA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTCTGCTTCCTCCAGATaGAGGATGAGAACGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSSASSR*RMRTAA Trigger: CGCAGCCGTTCTCATCCTCAATCTGGAGGAAGCAGA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CAA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGCAGGGCTGGTGTTCTaGTCCCCTTCTTTAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSAGLVF*SPSLMS Trigger: GGACATTAAAGAAGGGGACAAGAACACCAGCCCTGC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS-3UTR CAA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCTCTGCTTCCTCCAGATaGAGGATGAGAACGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSRPSNINSMRLLPEVMCSASSR*RMRTAA Trigger: CGCAGCCGTTCTCATCCTCAATCTGGAGGAAGCAGA...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR CAA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTGTTCCTTTGTCCTTTTaGGGAAAAGGTTTCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSVPLSF*GKGFWR Trigger: TCGCCAGAAACCTTTTCCCAAAAAGGACAAAGGAAC...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CAA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTTCAAGTGGCAGTGATTaGCTGTACAATGTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSSSGSD*LYNVKI Trigger: GATCTTCACATTGTACAGCAAATCACTGCCACTTGA...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CAA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTGTTCCTTTGTCCTTTTaGGGAAAAGGTTTCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FNEITPGGYVPFMRDTNIVPLSF*GKGFWR Trigger: TCGCCAGAAACCTTTTCCCAAAAAGGACAAAGGAAC...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR CAA 90 bp | TTACTTCAGCCGTGGAATTTAAACCCAGAAGTTTTTCCAGGTCCCGATTCTTCTAAATTACCATTGCACTaGCAATGCTTTCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQPWNLNPEVFPGPDSSKLPLH*QCFLPA Trigger: AGCAGGAAGAAAGCATTGCAAGTGCAATGGTAATTT...AGAAGAATCGGGACCTGGAAAAACTTCTGGGTTTAAATTCCACGGCTGAAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS TCA 90 bp | CAGCAACAGATAGACCTTCCGTGTCGTTCTCAGAACTTGATTCACTaGAGCTTTTCCAACGTTCTTTTGCTCTTGAAAGAAAGATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QQQIDLPCRSQNLIH*SFSNVLLLLKERFH Trigger: ATGAAATCTTTCTTTCAAGAGCAAAAGAACGTTGGAAAAGCTTCAGTGAATCAAGTTCTGAGAACGACACGGAAGGTCTATCTGTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS-3UTR CAA 90 bp | TTCAATGAGATTACTCCCGGAGGTTATGTGCCTTTTATGAGAGACACCAATATTTCAAGTGGCAGTGATTaGCTGTACAATGTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FNEITPGGYVPFMRDTNISSGSD*LYNVKI Trigger: GATCTTCACATTGTACAGCAAATCACTGCCACTTGA...AATATTGGTGTCTCTCATAAAAGGCACATAACCTCCGGGAGTAATCTCATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS TCA 90 bp | GCTATTCTGCATCTGAATGGCTGCGATGCAGCTGAAAAGCTTTTCTaGTGTTATATCTTCTGGCAATTTGGTAAGAAATTGTGCTATATG | + |
|
Preference number: 5 (lower is better) Translates to: AILHLNGCDAAEKLF*CYIFWQFGKKLCYM Trigger: CATATAGCACAATTTCTTACCAAATTGCCAGAAGATATAACATCAGAAAAGCTTTTCAGCTGCATCGCAGCCATTCAGATGCAGAATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
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| CDS-3UTR CAA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCCGCATTACTTCCCAATaGGGCAGTATTTCATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KSRPSNINSMRLLPEVMCRITSQ*GSISLI Trigger: GATCAATGAAATACTGCCCAATTGGGAAGTAATGCG...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS-3UTR CAA 90 bp | AAATCTAGGCCAAGTAATATAAATTCAATGAGATTACTCCCGGAGGTTATGTGCTTGGGCAGTATTTCATaGATCCAAATTACCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRPSNINSMRLLPEVMCLGSIS*IQITIA Trigger: TGCAATGGTAATTTGGATCAATGAAATACTGCCCAA...GCACATAACCTCCGGGAGTAATCTCATTGAATTTATATTACTTGGCCTAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS GCA 90 bp | CATTACTTCCCAATTGGGCAGTATTTCATTGATCCAAATTACCATTaGACTTGCAATGCTTTCTTCCTGCTTAAATCGTTCTTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: HYFPIGQYFIDPNYH*TCNAFFLLKSFFHY Trigger: ATAATGAAAGAACGATTTAAGCAGGAAGAAAGCATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTGCCCAATTGGGAAGTAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS CCA 72 bp | TCCGAGAGCCGAAGCGGGCGTCGGGGAGGCCGAGGCTaGGCTCCGCGCTCTCGACGGCCCTCCCGGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SESRSGRRGGRG*APRSRRPSRQG Trigger: CCCCTGCCGGGAGGGCCGTCGAGAGCGCGGAGCCCAGCCTCGGCCTCCCCGACGCCCGCTTCGGCTCTCGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS GCA 72 bp | CCGCGAAGCCACCGCTCCGTCGAGCCCGAGCCGTGGTaGCCCCGGGACCCTGCTCTGCCGCTGGCAAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRSHRSVEPEPW*PRDPALPLARV Trigger: CACCCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCACCACGGCTCGGGCTCGACGGAGCGGTGGCTTCGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS GCA 72 bp | CAGCAGGCAGGGACGGCCGCAGGTTCGGCGGCGACGTaGCTCCTCTGGGCCGCGACGGTCCTGGCGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQAGTAAGSAAT*LLWAATVLAQQ Trigger: TTGCTGCGCCAGGACCGTCGCGGCCCAGAGGAGGCACGTCGCCGCCGAACCTGCGGCCGTCCCTGCCTGCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS TCA 72 bp | GACGGCCCCGCTGAGGGCAGGAGGTCGCCGGCGCTCTaGCGGCGGCTCACCTCGAACGTGTTCCGAGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DGPAEGRRSPAL*RRLTSNVFREP Trigger: CGGCTCTCGGAACACGTTCGAGGTGAGCCGCCGTCAGAGCGCCGGCGACCTCCTGCCCTCAGCGGGGCCGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 72 bp | AATCCGCGAAGCCACCGCTCCGTCGAGCCCGAGCCGTaGTGCCCCCGGGACCCTGCTCTGCCGCTGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NPRSHRSVEPEP*CPRDPALPLAR Trigger: CCTTGCCAGCGGCAGAGCAGGGTCCCGGGGGCACCACGGCTCGGGCTCGACGGAGCGGTGGCTTCGCGGATT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS TCA 72 bp | CTAAAGCCGCTGGTGGCCGGGACGGTCTTCCCGTCCTaGCCCATGGGCCCCGGGACTGGGAGCAGCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LKPLVAGTVFPS*PMGPGTGSSSA Trigger: CGCCGAGCTGCTCCCAGTCCCGGGGCCCATGGGTCAGGACGGGAAGACCGTCCCGGCCACCAGCGGCTTTAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS GCA 72 bp | CCTGGCGCAGCAAAAAGCCCGAGTCTCCGTTGGTCATaGCTGAGCCGCGCGCCGCGGGGACTGCTGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGAAKSPSLRWS*LSRAPRGLLPP Trigger: CGGCGGCAGCAGTCCCCGCGGCGCGCGGCTCAGGCATGACCAACGGAGACTCGGGCTTTTTGCTGCGCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 72 bp | CGCTGGTGGCCGGGACGGTCTTCCCGTCCTGACCCATaGGCCCCGGGACTGGGAGCAGCTCGGCGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWWPGRSSRPDP*APGLGAARRSF Trigger: GAAGGAACGCCGAGCTGCTCCCAGTCCCGGGGCCCATGGGTCAGGACGGGAAGACCGTCCCGGCCACCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 72 bp | GACGGTCTTCCCGTCCTGACCCATGGGCCCCGGGACTaGGAGCAGCTCGGCGTTCCTTCCCGAGCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DGLPVLTHGPRD*EQLGVPSRAGS Trigger: GGAGCCTGCTCGGGAAGGAACGCCGAGCTGCTCCCAGTCCCGGGGCCCATGGGTCAGGACGGGAAGACCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CCA 72 bp | AGTGGCTCCAGCGCAAAGCTCTTGCGTCGTGAAGACTaGGGGGCTGCTTTACAGGTCCTCCCTGTGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSSAKLLRRED*GAALQVLPVRA Trigger: AGCTCGCACAGGGAGGACCTGTAAAGCAGCCCCCCAGTCTTCACGACGCAAGAGCTTTGCGCTGGAGCCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS TCA 72 bp | TTAGCTTCGGCCACCATCTCATCATACTCCTGCCGGTaGCGCAGCGCTTCTTCCACAGATTTCGCAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LASATISSYSCR*RSASSTDFAGR Trigger: TCTTCCTGCGAAATCTGTGGAAGAAGCGCTGCGTCACCGGCAGGAGTATGATGAGATGGTGGCCGAAGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CAA 90 bp | ACTCTTCTGGTACTACGCATTACTTCCCAATTGGGCAGTATTTCATaGATCCAAATTACCATTGCACTTGCAATGCTTTCTTCCTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TLLVLRITSQLGSIS*IQITIALAMLSSCL Trigger: TAAGCAGGAAGAAAGCATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTGCCCAATTGGGAAGTAATGCGTAGTACCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS TCA 72 bp | ATAGACCTTCCGTGTCGTTCTCAGAACTTGATTCACTaGAGCTTTTCCAACGTTCTTTTGCTCTTGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: IDLPCRSQNLIH*SFSNVLLLLKE Trigger: TTCTTTCAAGAGCAAAAGAACGTTGGAAAAGCTTCAGTGAATCAAGTTCTGAGAACGACACGGAAGGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037302.6 ENSMUST00000235558.2 |
||
| CDS CAA 72 bp | TCTCGAACTCTTCTGGTACTACGCATTACTTCCCAATaGGGCAGTATTTCATTGATCCAAATTACCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRTLLVLRITSQ*GSISLIQITIA Trigger: TGCAATGGTAATTTGGATCAATGAAATACTGCCCAATTGGGAAGTAATGCGTAGTACCAGAAGAGTTCGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS CAA 72 bp | GTACTACGCATTACTTCCCAATTGGGCAGTATTTCATaGATCCAAATTACCATTGCACTTGCAATGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLRITSQLGSIS*IQITIALAMLS Trigger: AGAAAGCATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTGCCCAATTGGGAAGTAATGCGTAGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
||
| CDS TCA 72 bp | TACTACGCATTACTTCCCAATTGGGCAGTATTTCATTaGTCCAAATTACCATTGCACTTGCAATGCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YYALLPNWAVFH*SKLPLHLQCFL Trigger: AAGAAAGCATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTGCCCAATTGGGAAGTAATGCGTAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037302.6 |
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