Pregenerated sensors for TBC1D10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042492Ensembl transcript IDs: ENSMUST00000120705.3, ENSMUST00000205620.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTAGCCCTGCGGACAGGAGGTGGTGGGGAAGGAGCCCCTCCAACTaGCCGGGAGCCTCTGCTCTTGAGACTAGGGAGGCTGAGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: TSPADRRWWGRSPSN*PGASALETREAEEA Trigger: AGCCTCCTCAGCCTCCCTAGTCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACCTCCTGTCCGCAGGGCTAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR GCA 90 bp | GTGCCTAGTGGGGTGCTGTTACCAGTAGGTGAAGGAAGGGATGGATaGAGTCCCTCAGCAATGACGACAGCCCCAGGGACGGGCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VPSGVLLPVGEGRDG*SPSAMTTAPGTGPA Trigger: TGCTGGGCCCGTCCCTGGGGCTGTCGTCATTGCTGAGGGACTGCATCCATCCCTTCCTTCACCTACTGGTAACAGCACCCCACTAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR GCA 90 bp | TCATGGATGGCTCGGGAGCCGTGTAGTCGCCGTGAGGGCCGATACTaGAGCTCTCCTCTAGTTTCTCGCCACTTCTTCAGTTGGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SWMAREPCSRREGRY*SSPLVSRHFFSWAA Trigger: TGCAGCCCAACTGAAGAAGTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCCCTCACGGCGACTACACGGCTCCCGAGCCATCCATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR GCA 90 bp | TCTCCAGACTTGGTCACTGTTACCCTAGGTAATGCAGCTGTCCCTTaGACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: SPDLVTVTLGNAAVP*TVAVLAMYGSAAGK Trigger: CTTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAAGGGACAGCTGCATTACCTAGGGTAACAGTGACCAAGTCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CCA 90 bp | GGCCGATACTGCAGCTCTCCTCTAGTTTCTCGCCACTTCTTCAGTTaGGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GRYCSSPLVSRHFFS*AAFSRSIHASVTGR Trigger: CCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR CCA 90 bp | ACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATaGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: TSGPDVPAKTCRLNL*KVRLCACLPHSPYS Trigger: AGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR TCA 90 bp | AGCGCTGTGGAGAGGGGAAAGGACAGCACCCACCCCAGGCCAACCTaGCCTTCTGTACATAATTACAACACAAGGATATCCAGGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SAVERGKDSTHPRPT*PSVHNYNTRISRRE Trigger: TTCTCTCCTGGATATCCTTGTGTTGTAATTATGTACAGAAGGTCAGGTTGGCCTGGGGTGGGTGCTGTCCTTTCCCCTCTCCACAGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR GCA 90 bp | TCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTaGCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATA | + |
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Preference number: 1 (lower is better) Translates to: SCQDLQTEPMESQTL*LPPPLPLLYSTLQI Trigger: TATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CCA 90 bp | CAGAAGGATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTaGACAAAAGGGTCTCCAGACTTGGTCACTGTTACCCTAGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: QKDFIGVTETQAEPN*TKGSPDLVTVTLGN Trigger: ATTACCTAGGGTAACAGTGACCAAGTCTGGAGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATCCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CCA 90 bp | AGAACTGTATTAAAGGGTCACAGCATTAGGAAGATTGAGAACCAGTaGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAA | + |
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Preference number: 1 (lower is better) Translates to: RTVLKGHSIRKIENQ*SRCSCQDLQTEPME Trigger: TTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTTCTCAATCTTCCTAATGCTGTGACCCTTTAATACAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGGGGAAGGAGCCCCTCCAACTGCCCGGGAGCCTCTGCTCTTGAGACTACCCAGGGGTGGCTGCTaGCGCCTGCGTTCCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: GGGEGAPPTAREPLLLRLPRGGC*RLRSSW Trigger: CCATGAGGAACGCAGGCGGCAGCAGCCACCCCTGGG...TAGTCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGGTGGGGAAGGAGCCCCTCCAACTGCCCGGGAGCCTCTGCTCTTGAGAGTGGCTGCTGCCGCCTaGGTTCCTCATGGATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GGGGEGAPPTAREPLLLRVAAAA*VPHGWL Trigger: GAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC...TCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGGGGAAGGAGCCCCTCCAACTGCCCGGGAGCCTCTGCTCTTGAGACTACGCCACTTCTTCAGTTaGGCTGCATTCTCCCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGGEGAPPTAREPLLLRLRHFFS*AAFSRS Trigger: TGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCG...TAGTCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGGTGGGGAAGGAGCCCCTCCAACTGCCCGGGAGCCTCTGCTCTTGAGACTTCTTCAGTTGGGCTaGATTCTCCCGCTCAATCCA | + |
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Preference number: 2 (lower is better) Translates to: GGGGEGAPPTAREPLLLRLLQLG*ILPLNP Trigger: TGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAG...TCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCCCTGCCAAGGGGAGCTaGGAGAGCCTGCCAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TEPMESQTLCLPPPLPLLPAKGS*ESLPGL Trigger: CAGCCCTGGCAGGCTCTCCCAGCTCCCCTTGGCAGG...GAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CAA 90 bp | TTCCCACTTCTGCCGCTCCTTCTCCTGCCTTTCCCGCTCCTTCTCTaGTCTCTGCCGCTCCTTCTCTCGATCTTTCTCCTGTTTCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: FPLLPLLLLPFPLLL*SLPLLLSIFLLFLP Trigger: CGGCAGAAACAGGAGAAAGATCGAGAGAAGGAGCGGCAGAGACAAGAGAAGGAGCGGGAAAGGCAGGAGAAGGAGCGGCAGAAGTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGGCCCCCAGTAGGCAGTaGGGTGACAGGCAGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TKSKTDFVTAAERPEHTKAPSRQ*GDRQGP Trigger: GGGGCCCTGCCTGTCACCCCACTGCCTACTGGGGGC...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CAA 90 bp | GGGCCGATACTGCAGCTCTCCTCTAGTTTCTCGCCACTTCTTCAGTaGGGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GPILQLSSSFSPLLQ*GCILPLNPCFCHWE Trigger: CTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTGTTTCTGCCGCTCTTTCTCCTGCCGCCTGATCTCCTTGCTGGTGCCTGCTGTTACCAGTAGGTaGAGGAAGGGATGGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: FSCFCRSFSCRLISLLVPAVTSR*RKGWMQ Trigger: CTGCATCCATCCCTTCCTTCACCTACTGGTAACAGC...AGGCACCAGCAAGGAGATCAGGCGGCAGGAGAAAGAGCGGCAGAAACAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCGAGAGAAAACAGCCTTaGCCCCCAGTAGGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TEPMESQTLCLPPPLPLLERKQP*PPVGSG Trigger: CCCACTGCCTACTGGGGGCCAAGGCTGTTTTCTCTC...GAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | AAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACCGAAGACAGACTTTGTaGCTGCAGCAGAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTCRLNLWKVRLCACLPHRRQTL*LQQRGL Trigger: CAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCG...GTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCAGTGAAGCAGCGCTGTaGAGAGGGGAAAGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: KVRLCACLPHSPYSTALFSEAAL*RGERTA Trigger: TGCTGTCCTTTCCCCTCTCCACAGCGCTGCTTCACT...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCTGCAGCAGAGAGGCCTaGGCATACAAAGCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KVRLCACLPHSPYSTALFCSREA*AYKASE Trigger: CTCACTTGCTTTGTATGCTCAGGCCTCTCTGCTGCA...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CAA 90 bp | ACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTCCAGACTaGGTCACTGTTACCCTAGGTAATGCAGCTGTCCCTTGCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: TETQAEPNWTKGSPD*VTVTLGNAAVPCTV Trigger: CACAGTGCAAGGGACAGCTGCATTACCTAGGGTAACAGTGACCAAGTCTGGAGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTCAGGGCTGCTCTCGATaGGGGGAAGGAGGAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: MRDEVSVYCDSFWGSNTIQGCSR*GEGGGP Trigger: TGGCCCTCCTCCTTCCCCTCATCGAGAGCAGCCCTG...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCCACCCCAGGCCAACCTaGCCTTCTGTACATAATTAC | + |
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Preference number: 2 (lower is better) Translates to: KVRLCACLPHSPYSTALFHPRPT*PSVHNY Trigger: GTAATTATGTACAGAAGGTCAGGTTGGCCTGGGGTG...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR GCA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTGAAGGAGGAGGGCCATaGCATCCAGATCCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: DFIGVTETQAEPNWTKGSEGGGP*HPDPTR Trigger: TCTGGTTGGATCTGGATGGCATGGCCCTCCTCCTTC...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGAATGCAGCTGTCCCTTaGACTGTGGCTGTCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: TKSKTDFVTAAERPEHTKNAAVP*TVAVLA Trigger: GGCCAGGACAGCCACAGTGCAAGGGACAGCTGCATT...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTTAAATAAACTGGAGTaGAGCAGCGCTGTGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRCSCQDLQTEPMESQTLLNKLE*SSAVER Trigger: CCTCTCCACAGCGCTGCTTCACTCCAGTTTATTTAA...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACCCACAAAACTGCCACTaGGGTGGGACCAAGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNPQNCH*GGTKTE Trigger: TTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGG...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTGTACGGATCAGCAGCTaGCAAGGAGTCAGGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: MRDEVSVYCDSFWGSNTIVRISS*QGVRGI Trigger: GATTCCCCTGACTCCTTGCCAGCTGCTGATCCGTAC...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGGTCGAATACTATTCACAGAGGTTGCCTAAGACTATCAGAAAACAGAGAGTTCCTGCCAAGACCTaGAGACTGAACCTATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGVEYYSQRLPKTIRKQRVPAKT*RLNLWK Trigger: TTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAAC...TCTCTGTTTTCTGATAGTCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCGTGAGGGCCGATTCGCCACTTCTTCAGTaGGGCTGCATTCTCCCGCTC | + |
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Preference number: 3 (lower is better) Translates to: ACVPHGWLGSRVVAVRADSPLLQ*GCILPL Trigger: GAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGA...ATCGGCCCTCACGGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR GCA 72 bp | GCTCGGGAGCCGTGTAGTCGCCGTGAGGGCCGATACTaGAGCTCTCCTCTAGTTTCTCGCCACTTCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: AREPCSRREGRY*SSPLVSRHFFS Trigger: ACTGAAGAAGTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCCCTCACGGCGACTACACGGCTCCCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| 3UTR GCA 72 bp | TTGGTCACTGTTACCCTAGGTAATGCAGCTGTCCCTTaGACTGTGGCTGTCCTGGCCATGTACGGATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LVTVTLGNAAVP*TVAVLAMYGSA Trigger: TGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAAGGGACAGCTGCATTACCTAGGGTAACAGTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR TCA 72 bp | ATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTaGGCATACAAAGCAAGTGAGTTAGGAGAGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: IEDRLCDCSREA*AYKASELGESR Trigger: CCTGCTCTCTCCTAACTCACTTGCTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR GCA 72 bp | TTGAGAACCAGTGGTCCAGATGTTCCTGCCAAGACCTaGAGACTGAACCTATGGAAAGTCAGACTTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: LRTSGPDVPAKT*RLNLWKVRLCA Trigger: GGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CCA 72 bp | TTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTaGACAAAAGGGTCTCCAGACTTGGTCACTGTTACC | + |
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Preference number: 3 (lower is better) Translates to: FIGVTETQAEPN*TKGSPDLVTVT Trigger: GGTAACAGTGACCAAGTCTGGAGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTTATTCAGAGAGGGGCTaGATGGCTAGAAAGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: NQWSRCSCQDLQTEPMESYSERG*MARKEQ Trigger: TTGTTCCTTTCTAGCCATCAAGCCCCTCTCTGAATA...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTATGGAAAGTCAGACTTaGTGCCTGCCTCCCCCACTC | + |
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Preference number: 3 (lower is better) Translates to: MRDEVSVYCDSFWGSNTIMESQT*CLPPPL Trigger: GAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCAT...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR GCA 72 bp | ATTAGGAAGATTGAGAACCAGTGGTCCAGATGTTCCTaGCAAGACCTGCAGACTGAACCTATGGAAAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: IRKIENQWSRCS*QDLQTEPMESQ Trigger: CTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTTCTCAATCTTCCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR TCA 72 bp | ATGGCTAGAAAGGAACAAAATCGAAGACAGACTTTGTaGCTGCAGCAGAGAGGCCTGAGCATACAAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MARKEQNRRQTL*LQQRGLSIQSK Trigger: CTTGCTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGTTCCTTTCTAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR TCA 72 bp | TGGACTCAAGGGAAGACCCTTATTCAGAGAGGGGCTTaGTGGCTAGAAAGGAACAAAATCGAAGACAGACTT | + |
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Preference number: 3 (lower is better) Translates to: WTQGKTLIQRGA*WLERNKIEDRL Trigger: AAGTCTGTCTTCGATTTTGTTCCTTTCTAGCCATCAAGCCCCTCTCTGAATAAGGGTCTTCCCTTGAGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| 3UTR CCA 72 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTaGGGGTCGAATACTATTCACAGAGGTTGCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: MRDEVSVYCDSF*GSNTIHRGCLR Trigger: TCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR GCA 90 bp | AGCTGGGAGAGCCTGCCAGGGCTGCTCTCGATGAGGGGAAGGAGGAGGGCCATGGGGCCCAGGGGTGGCTaGTGCCGCCTGCGTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SWESLPGLLSMRGRRRAMGPRGG*CRLRSS Trigger: TGAGGAACGCAGGCGGCAGCAGCCACCCCTGGGCCC...CATGGCCCTCCTCCTTCCCCTCATCGAGAGCAGCCCTGGCAGGCTCTCCCAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CCA 90 bp | GTGGCTGCTGCCGCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCCAACACCGCAGCCACTaGGGCCTGGGCCTGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: VAAAACVPHGWLGSRVVAQHRSH*GLGLTV Trigger: TACTGTCAGGCCCAGGCCCCAGTGGCTGCGGTGTTG...GGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
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| CDS-3UTR CCA 90 bp | TTGCACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAAGGAGTCAGGCCGAGTGGGGGTCCCTaGTCCTGGGACAGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LHCGCPGHVRISSWQGVRPSGGP*SWDRRG Trigger: GCCTCTCCTGTCCCAGGACCAGGGACCCCCACTCGG...CCTGACTCCTTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CCA 90 bp | TTGCACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAAGGAGTCAGGCCTGCGGACAGGAGGTaGTGGGGAAGGAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCGCPGHVRISSWQGVRPADRR*WGRSPS Trigger: GGAGGGGCTCCTTCCCCACCACCTCCTGTCCGCAGG...CCTGACTCCTTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGAGAGCCTGCCAGGGCTGCTCTCGATGAGGGGAAGGAGGAGGGCCATGACCTCTTCCGTCTTTTaGGTGTCTGTCCCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWESLPGLLSMRGRRRAMTSSVF*VSVPKA Trigger: GGCTTTGGGGACAGACACTCAAAAGACGGAAGAGGT...CATGGCCCTCCTCCTTCCCCTCATCGAGAGCAGCCCTGGCAGGCTCTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGCTGCCGCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCATACATGCCTTGACATaGGCGCAGCTTTTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAAAACVPHGWLGSRVVAIHALT*AQLFHR Trigger: TCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTAT...GGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGCTGCCGCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCAAAGGGAACTGGCGATaGAGGTCCTTCTCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: VAAAACVPHGWLGSRVVAKGNWR*RSFSIT Trigger: TGTGATTGAGAAGGACCTGCATCGCCAGTTCCCTTT...GGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGAGAGCCTGCCAGGGCTGCTCTCGATGAGGGGAAGGAGGAGGGCCATGCTTCTTCAGTTGGGCTaGATTCTCCCGCTCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLPGLLSMRGRRRAMLLQLG*ILPLNP Trigger: TGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAG...CATGGCCCTCCTCCTTCCCCTCATCGAGAGCAGCCCTGGCAGGCTCTCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCGTGAGGGCCGATGTTTCATACATGCCTTaGCATGAGCGCAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACVPHGWLGSRVVAVRADVSYMP*HERSFS Trigger: GGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAAC...ATCGGCCCTCACGGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGAAGAGCCCAGGGGTGGCTGCTaGCGCCTGCGTTCCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGKESGESSHFPQKKEEPRGGC*RLRSSW Trigger: CCATGAGGAACGCAGGCGGCAGCAGCCACCCCTGGG...CTCTTCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGAGTAGCTCAGGGTGTCTaGGGCCTGACCCCGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRVAQGV*GLTPRP Trigger: GGGCCTCGGGGTCAGGCCCCAGACACCCTGAGCTAC...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTGGGGAAGGAGCCCCTCCAACTGCCCGGGAGCCTCTGCTCTTGAGACTTCATGGAAAGGGAACTaGCGATGCAGGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RWWGRSPSNCPGASALETSWKGN*RCRSFS Trigger: TGAGAAGGACCTGCATCGCCAGTTCCCTTTCCATGA...AGTCTCAAGAGCAGAGGCTCCCGGGCAGTTGGAGGGGCTCCTTCCCCACCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR TCA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTTCCCGGGAGGGCCTGTaGCAGGCCCTGAGGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFIGVTETQAEPNWTKGSSREGL*QALRGP Trigger: AGGACCCCTCAGGGCCTGTCACAGGCCCTCCCGGGA...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TGTACGGATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAGGACTCCAAGGTCCCTaGCATGAGGCTCACGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTDQQLARSQGNQATFLRGLQGP*HEAHGV Trigger: GACTCCGTGAGCCTCATGTCAGGGACCTTGGAGTCC...TCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGATCCGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | AGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACATCGCTGCCGCCGAAGGTaGCGATGTGCCAGCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SATKLPLRWDQDRRECKHRCRRR*RCASGE Trigger: CTCTCCGCTGGCACATCGTCACCTTCGGCGGCAGCG...ATGTTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGACCCGAGGCCCCGAGATaGCAGGTCCTAGACTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQGVRGIKPLSSEKGPEAPR*QVLDWT Trigger: CGTCCAGTCTAGGACCTGGCATCTCGGGGCCTCGGG...TCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCCCACCATCATGGGATaGCGGGGGCCCATCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQWSRCSCQDLQTEPMESPTIMG*RGPICP Trigger: AGGGCAGATGGGCCCCCGGCATCCCATGATGGTGGG...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCAACAGGCTCCGGAGCTaGGGTCACTGTCACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVRLCACLPHSPYSTALFNRLRS*GHCHHS Trigger: GCTGTGGTGACAGTGACCCCAGCTCCGGAGCCTGTT...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | CCGTGTAGTCGCCGTGAGGGCCGATACTGCAGCTCTCCTCTAGTTTCTCGCCACCGTCAGGCCTGTAGATaGTATAGGCCTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PCSRREGRYCSSPLVSRHRQACR*YRPSGF Trigger: GAATCCTGAAGGCCTATACCATCTACAGGCCTGACG...GTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCCCTCACGGCGACTACACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| 3UTR CAA 72 bp | TGTTTCTGCCGCTCTTTCTCCTGCCGCCTGATCTCCTaGCTGGTGCCTAGTGGGGTGCTGTTACCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCRSFSCRLIS*LVPSGVLLPVG Trigger: ACCTACTGGTAACAGCACCCCACTAGGCACCAGCAAGGAGATCAGGCGGCAGGAGAAAGAGCGGCAGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGCCGTGCAGTCACTCCTaGAGCCACTGTGGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCQDLQTEPMESQTLPCSHS*SHCGPR Trigger: CCGGGGACCACAGTGGCTTCAGGAGTGACTGCACGG...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCCCAAGGTCCCTGACATaGGGCTCACGGAGTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVRLCACLPHSPYSTALFPRSLT*GSRSPS Trigger: ACTTGGACTCCGTGAGCCTCATGTCAGGGACCTTGG...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGAAGAGGAGGTCGCAGCTTCATaGCCACCTGCCACCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGKESGESSHFPQKKEEEVAAS*PPATCP Trigger: AGGACAGGTGGCAGGTGGGCATGAAGCTGCGACCTC...CTCTTCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCGCCTGATCTCCTTGCTGGTGCCTAGTGGGGTGCTGTTACCAGTAGGTACCAGGAAGTCCTCCTaGATACACTGTTGTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCRLISLLVPSGVLLPVGTRKSS*IHCCGR Trigger: CCTACCACAACAGTGTATGCAGGAGGACTTCCTGGT...ACCTACTGGTAACAGCACCCCACTAGGCACCAGCAAGGAGATCAGGCGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGGGGGGTCCCTGGTCCTaGGACAGGAGAGGCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCQDLQTEPMESQTLGGPWS*DRRGSN Trigger: GTTCGAGCCTCTCCTGTCCCAGGACCAGGGACCCCC...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | AAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTGCCAGGTCCTAGACTaGACGTGGAGCCCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTCRLNLWKVRLCACLPHCQVLD*TWSPGL Trigger: AAGACCTGGGCTCCACGTCCAGTCTAGGACCTGGCA...GTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | AGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACATGCGGACAGGAGGTGGTaGGGAAGGAGCCCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SATKLPLRWDQDRRECKHADRRW*GRSPSN Trigger: GTTGGAGGGGCTCCTTCCCCACCACCTCCTGTCCGC...ATGTTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACGCCTGTGACAGGCCCTaGGGGGTCCTCAGGCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNACDRP*GVLRHR Trigger: TCGGTGCCTGAGGACCCCTCAGGGCCTGTCACAGGC...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACACTTGAGCTCCCGCTaGCGAGCCACATCCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSATKLPLRWDQDRRECKHLSSR*RATSTG Trigger: TCCGGTGGATGTGGCTCGCCAGCGGGAGCTCAAGTG...TTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACAACACCGCAGCCACTaGGGCCTGGGCCTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSATKLPLRWDQDRRECKQHRSH*GLGLTV Trigger: TACTGTCAGGCCCAGGCCCCAGTGGCTGCGGTGTTG...TTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAAGGAGTCAGGTGCACTGTAGTAACCTaGGAGGTACTTGTCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHCGCPGHVRISSWQGVRCTVVT*EVLVAD Trigger: ATCTGCGACAAGTACCTCCCAGGTTACTACAGTGCA...CCTGACTCCTTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | CCGTGTAGTCGCCGTGAGGGCCGATACTGCAGCTCTCCTCTAGTTTCTCGCCACTTCGAAGCTGCTCCATaGTTTCATACATGCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCSRREGRYCSSPLVSRHFEAAP*FHTCLD Trigger: GTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAA...GTGGCGAGAAACTAGAGGAGAGCTGCAGTATCGGCCCTCACGGCGACTACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGCTGTCCCCACCATCATaGGATGCCGGGGGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCQDLQTEPMESQTLLSPPS*DAGGPS Trigger: AGATGGGCCCCCGGCATCCCATGATGGTGGGGACAG...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCGCTGTTACCAGTAGGTaGAGGAAGGGATGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVRLCACLPHSPYSTALFAVTSR*RKGWMQ Trigger: CTGCATCCATCCCTTCCTTCACCTACTGGTAACAGC...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | AAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTGCCTGAGTACTGGCTaGCCCCAAGGAAACCATACT | + |
|
Preference number: 4 (lower is better) Translates to: KTCRLNLWKVRLCACLPHCLSTG*PQGNHT Trigger: AGTATGGTTTCCTTGGGGGCAGCCAGTACTCAGGCA...GTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAAAGAGCACAGGGTCAATaGGCTGCCGCCGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSATKLPLRWDQDRRECKRAQGQ*AAAEGD Trigger: GTCACCTTCGGCGGCAGCGCATTGACCCTGTGCTCT...TTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGGTGGCTGCTGCCGCCTaGGTTCCTCATGGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKTDFVTAAERPEHTKVAAAA*VPHGWL Trigger: GAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGTCGAATACTATTCACAGAGGTTGCCTAAGACTATCAGAAAACAGAGAGGGCAAGCGGGGGTTTaGCAGTCAGGGCTCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGVEYYSQRLPKTIRKQRGQAGV*QSGLQA Trigger: CGCCTGGAGCCCTGACTGCCAAACCCCCGCTTGCCC...TCTCTGTTTTCTGATAGTCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCTACAGCACTCTTCCTCCATCCAACTGAATaGCTTCCAGCCCTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVRLCACLPHSPYSTALFLHPTE*LPALHC Trigger: ACAGTGCAGGGCTGGAAGCCATTCAGTTGGATGGAG...GAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCCTGTCACTGGGAGGTTaGTTACCTCATGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEPMESQTLCLPPPLPLLLSLGG*LPHAPG Trigger: TCCTGGTGCATGAGGTAACCAACCTCCCAGTGACAG...GAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGACGCCACTTCTTCAGTTaGGCTGCATTCTCCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRRHFFS*AAFSRS Trigger: TGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCG...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGTCGAATACTATTCACAGAGGTTGCCTAAGACTATCAGAAAACAGAGACTTCGCGGCTTCGGGTaGGGCCTCCAGGGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGVEYYSQRLPKTIRKQRLRGFG*GLQGQH Trigger: ATGCTGACCCTGGAGGCCTCACCCGAAGCCGCGAAG...TCTCTGTTTTCTGATAGTCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGACTTCTGGAAACGCCGTaGCAGCCACTTATCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRLLETP*QPLIPV Trigger: AACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAG...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TGTACGGATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAATTTCTCCATCCAACTaGATGGCTTCCAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTDQQLARSQGNQATFLRISPSN*MASSPA Trigger: TGCAGGGCTGGAAGCCATTCAGTTGGATGGAGAAAT...TCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGATCCGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGTCGAATACTATTCACAGAGGTTGCCTAAGACTATCAGAAAACAGAGACCGGGCCTCAGCTGCTaGCCTGTCCCCACCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGVEYYSQRLPKTIRKQRPGLSC*PVPTIM Trigger: CATGATGGTGGGGACAGGTCAGCAGCTGAGGCCCGG...TCTCTGTTTTCTGATAGTCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | AAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACAACTTGCCAGGGTTCTaGTCCAGGAGTTCCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTCRLNLWKVRLCACLPHNLPGF*SRSSLL Trigger: TAGCAAGGAACTCCTGGAGCAGAACCCTGGCAAGTT...GTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGAAGAGAATGGCTTCCAGCCCTaGACTGTAGTAACCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGKESGESSHFPQKKEENGFQP*TVVTWE Trigger: CTCCCAGGTTACTACAGTGCAGGGCTGGAAGCCATT...CTCTTCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGAGAAGGAAGGGATGGATaGAGTCCCTCAGCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDREGRDG*SPSAMT Trigger: CGTCATTGCTGAGGGACTGCATCCATCCCTTCCTTC...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAATGCCGCTCCTTCTCCTaGCTTTCCCGCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSATKLPLRWDQDRRECKCRSFS*LSRSFS Trigger: AGAGAAGGAGCGGGAAAGGCAGGAGAAGGAGCGGCA...TTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | ATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGAGTGGAGCCCAGGTCTTaGAAGTTTTCAACAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQGVRGIKPLSSEKGVEPRS*KFSTGS Trigger: GGAGCCTGTTGAAAACTTTCAAGACCTGGGCTCCAC...TCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGACTATTAGACAGGTACTaGCAGGCCTTGGCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRLLDRY*QALALR Trigger: TCTGAGAGCCAAGGCCTGGCAGTACCTGTCTAATAG...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGTTTCTCGCCACTTCTTCAGTTGGGCTGCATTCTCCCGCTCAATCCATGCAACTTGCCAGGGTTCTaGTCCAGGAGTTCCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSPLLQLGCILPLNPCNLPGF*SRSSLL Trigger: TAGCAAGGAACTCCTGGAGCAGAACCCTGGCAAGTT...GCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGAGAAACTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTGGGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAGGTTGCCATGGTTTCATACATaGCTTGACATGAGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSWAAFSRSIHASVTGRLPWFHT*LDMSAA Trigger: AGCTGCGCTCATGTCAAGGCATGTATGAAACCATGG...CAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGAAAAAGGAAGGTTGGTTACCTCATaGACCAGGAAGTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQGVRGIKPLSSEKGRLVTS*TRKSSC Trigger: GCAGGAGGACTTCCTGGTGCATGAGGTAACCAACCT...TCCTTTTTCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTCGCAGCTTTACCTTCTaGAAACGCCGTGACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DFIGVTETQAEPNWTKGSRSFTF*KRRDSH Trigger: GTGGCTGTCACGGCGTTTCCAGAAGGTAAAGCTGCG...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTGGGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAGGTTGTGCACTGTAGTAACCTaGGAGGTACTTGTCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSWAAFSRSIHASVTGRLCTVVT*EVLVAD Trigger: ATCTGCGACAAGTACCTCCCAGGTTACTACAGTGCA...CAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| 3UTR CAA 72 bp | CAAGCTGAGCCTAACTGGACAAAAGGGTCTCCAGACTaGGTCACTGTTACCCTAGGTAATGCAGCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEPNWTKGSPD*VTVTLGNAAVP Trigger: AGGGACAGCTGCATTACCTAGGGTAACAGTGACCAAGTCTGGAGACCCTTTTGTCCAGTTAGGCTCAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGAATACATGCCTTGACATaGGCGCAGCTTTTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRIHALT*AQLFHR Trigger: TCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTAT...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTGGGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAGGTTGGGTAGGTTTCGAAGCTaGTCCATGGTTTCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSWAAFSRSIHASVTGRLGRFRS*SMVSYM Trigger: CATGTATGAAACCATGGAGCAGCTTCGAAACCTACC...CAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR GCA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTCTCCCGCTCAATCCATaGTTCTGTCACTGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DFIGVTETQAEPNWTKGSLPLNP*FCHWEV Trigger: AACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAG...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACGTGAGGGCCGATACTaGAGCTCTCCTCTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSATKLPLRWDQDRRECKREGRY*SSPLVS Trigger: AGAAACTAGAGGAGAGCTGCAGTATCGGCCCTCACG...TTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGCCGAGTCTGAACCCATaGAGCTCACATCATCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSKTDFVTAAERPEHTKPSLNP*SSHHPA Trigger: TGCCGGATGATGTGAGCTCCATGGGTTCAGACTCGG...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACAGGCTGCCTGAGTACTaGCTGCCCCCAAGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNRLPEY*LPPRKP Trigger: TGGTTTCCTTGGGGGCAGCCAGTACTCAGGCAGCCT...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | TGTACGGATCAGCAGCTGGCAAGGAGTCAGGGGAATCAAGCCACTTTCCTCAGATTCGAAGCTGCTCCATaGTTTCATACATGCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTDQQLARSQGNQATFLRFEAAP*FHTCLD Trigger: GTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAA...TCTGAGGAAAGTGGCTTGATTCCCCTGACTCCTTGCCAGCTGCTGATCCGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTATTTATCTCCGAGTCTaGACCCATGGAGCTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: NQWSRCSCQDLQTEPMESIYLRV*THGAHI Trigger: GATGTGAGCTCCATGGGTTCAGACTCGGAGATAAAT...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTCATACTTGTCCGTCTTaGGCAGGGCCATCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: DFIGVTETQAEPNWTKGSHTCPS*AGPSHL Trigger: TAAATGGGATGGCCCTGCGCAAGACGGACAAGTATG...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGAAAGGGAACTGGCGATaGAGGTCCTTCTCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCQDLQTEPMESQTLKGNWR*RSFSIT Trigger: TGTGATTGAGAAGGACCTGCATCGCCAGTTCCCTTT...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGACCAGGAAGTCCTCCTaGATACACTGTTGTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSKTDFVTAAERPEHTKTRKSS*IHCCGR Trigger: CCTACCACAACAGTGTATGCAGGAGGACTTCCTGGT...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGCGTCAGGCCTGTAGATaGTATAGGCCTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKTDFVTAAERPEHTKRQACR*YRPSGF Trigger: GAATCCTGAAGGCCTATACCATCTACAGGCCTGACG...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCGAAGACAGACTTTGTGACTGCAGCAGAGAGGCCTGAGCATACAAAGCCATGGTTTCATACATaGCTTGACATGAGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKTDFVTAAERPEHTKPWFHT*LDMSAA Trigger: AGCTGCGCTCATGTCAAGGCATGTATGAAACCATGG...CTTTGTATGCTCAGGCCTCTCTGCTGCAGTCACAAAGTCTGTCTTCGATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACTCCTTCTCTTGTCTCTaGCGCTCCTTCTCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNSFSCL*RSFSRS Trigger: AGATCGAGAGAAGGAGCGGCAGAGACAAGAGAAGGA...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTGTCCTAGACTGGACGTaGAGCCCAGGTCTTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MRDEVSVYCDSFWGSNTIVLDWT*SPGLES Trigger: ACTTTCAAGACCTGGGCTCCACGTCCAGTCTAGGAC...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTTCATGGAAAGGGAACTaGCGATGCAGGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRDEVSVYCDSFWGSNTISWKGN*RCRSFS Trigger: TGAGAAGGACCTGCATCGCCAGTTCCCTTTCCATGA...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | ATGAGAGATGAAGTGAGCGTTTACTGTGACTCCTTTTGGGGGTCGAATACTATTGGGCAAAGATGCACATaGACCACTCTGTCATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRDEVSVYCDSFWGSNTIGQRCT*TTLSCR Trigger: TCTACATGACAGAGTGGTTCATGTGCATCTTTGCCC...AATAGTATTCGACCCCCAAAAGGAGTCACAGTAAACGCTCACTTCATCTCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGGGTCGAATACTATTCACAGAGGTTGCCTAAGACTATCAGAAAACAGAGAGTTTCATACATGCCTTaGCATGAGCGCAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGVEYYSQRLPKTIRKQRVSYMP*HERSFS Trigger: GGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAAC...TCTCTGTTTTCTGATAGTCTTAGGCAACCTCTGTGAATAGTATTCGACCCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACGGTAGGTTTCGAAGCTaGTCCATGGTTTCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNGRFRS*SMVSYM Trigger: CATGTATGAAACCATGGAGCAGCTTCGAAACCTACC...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 90 bp | CCACCGGAGTCGGAGCCGGAGCCTCGCATGTCCCGGGAGGGCCTGTaGCAGGCCCTGAGGGGTCCTCAGGCACCGACCCTGCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPESEPEPRMSREGL*QALRGPQAPTLLML Trigger: CAGCATCAGCAGGGTCGGTGCCTGAGGACCCCTCAGGGCCTGTCACAGGCCCTCCCGGGACATGCGAGGCTCCGGCTCCGACTCCGGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CCA 90 bp | TGGGACGCAGGCGGGCCGAGCCTCCCCGGGGGCCACCAATTCGACTaGGGCCGAAGTGGCTGTAGTCACTGGCGGTCCCGGTTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: WDAGGPSLPGGHQFD*GRSGCSHWRSRFHH Trigger: GTGGTGGAACCGGGACCGCCAGTGACTACAGCCACTTCGGCCCCAGTCGAATTGGTGGCCCCCGGGGAGGCTCGGCCCGCCTGCGTCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS GCA 90 bp | ACCGACGTCTCGGCTCCTGTTTCTGCCGCTGGTGCGGGGAACTCTTaGGTCTTCGCGGCTTCGGGTGAGGCCTCCAGGGTCAGCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDVSAPVSAAGAGNS*VFAASGEASRVSIT Trigger: AGTGATGCTGACCCTGGAGGCCTCACCCGAAGCCGCGAAGACGCAAGAGTTCCCCGCACCAGCGGCAGAAACAGGAGCCGAGACGTCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 90 bp | TTCTGCCGCTGGTGCGGGGAACTCTTGCGTCTTCGCGGCTTCGGGTaGGGCCTCCAGGGTCAGCATCACTACCGTGCTGCTCGTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCRWCGELLRLRGFG*GLQGQHHYRAARSC Trigger: ACAGCTACGAGCAGCACGGTAGTGATGCTGACCCTGGAGGCCTCACCCGAAGCCGCGAAGACGCAAGAGTTCCCCGCACCAGCGGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 90 bp | GGACGTGGAGCCCAGGTCTTGAAAGTTTTCAACAGGCTCCGGAGCTaGGGTCACTGTCACCACAGCCACCGGAGTCGGAGCCGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGAQVLKVFNRLRS*GHCHHSHRSRSRSL Trigger: GAGGCTCCGGCTCCGACTCCGGTGGCTGTGGTGACAGTGACCCCAGCTCCGGAGCCTGTTGAAAACTTTCAAGACCTGGGCTCCACGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | GTGGCTGCTGCCGCCTGCGTTCCTCATGGATGGCTCGGGAGCCGTGTAGTCGCCTGCTCCAGGAGTTCCTaGCTATTAGACAGGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAAAACVPHGWLGSRVVACSRSS*LLDRYC Trigger: GCAGTACCTGTCTAATAGCAAGGAACTCCTGGAGCA...GGCGACTACACGGCTCCCGAGCCATCCATGAGGAACGCAGGCGGCAGCAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGTCCCTTGCACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAATCGGTACAGGTCCTGTaGCCCATGCCCTCCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPLHCGCPGHVRISSWQSVQVL*PMPSSS Trigger: GCTCGAGGAGGGCATGGGCAACAGGACCTGTACCGA...TTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAAGGGACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 90 bp | CCATGGAGCTCACATCATCCGGCAAGGACTCCAAGGTCCCTGACATaGGGCTCACGGAGTCCAAGTAGCTCAGGGTGTCTGGGGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PWSSHHPARTPRSLT*GSRSPSSSGCLGPD Trigger: GTCAGGCCCCAGACACCCTGAGCTACTTGGACTCCGTGAGCCTCATGTCAGGGACCTTGGAGTCCTTGCCGGATGATGTGAGCTCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CCA 90 bp | CGAGCCACATCCACCGGAATAGAGCTCTCTAGGCTGCCTGAGTACTaGCTGCCCCCAAGGAAACCATACTTGTCCGTCTTGCGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RATSTGIELSRLPEY*LPPRKPYLSVLRRA Trigger: GGCCCTGCGCAAGACGGACAAGTATGGTTTCCTTGGGGGCAGCCAGTACTCAGGCAGCCTAGAGAGCTCTATTCCGGTGGATGTGGCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CCA 90 bp | AAGGGAACTGGCGATGCAGGTCCTTCTCAATCACATCGAGCCACTTaGGGTCCCCAGCAGCCCGCTCCAGCTCCTCAAACTTGCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGTGDAGPSQSHRAT*GPQQPAPAPQTCQG Trigger: ACCCTGGCAAGTTTGAGGAGCTGGAGCGGGCTGCTGGGGACCCCAAGTGGCTCGATGTGATTGAGAAGGACCTGCATCGCCAGTTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGAGAGCCTGCCAGGGCTGCTCTCGATGAGGGGAAGGAGGAGGGCCATGAACCTCTTCCGTCTTTaGAGTGTCTGTCCCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWESLPGLLSMRGRRRAMNLFRL*SVCPQS Trigger: GCTTTGGGGACAGACACTCAAAAGACGGAAGAGGTT...CATGGCCCTCCTCCTTCCCCTCATCGAGAGCAGCCCTGGCAGGCTCTCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTGTTTCTGCCGCTCTTTCTCCTGCCGCCTGATCTCCTTGCTGGTGCCTTCGGTACAGGTCCTGTaGCCCATGCCCTCCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSCFCRSFSCRLISLLVPSVQVL*PMPSSS Trigger: GCTCGAGGAGGGCATGGGCAACAGGACCTGTACCGA...AGGCACCAGCAAGGAGATCAGGCGGCAGGAGAAAGAGCGGCAGAAACAGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR CAA 90 bp | GATTTCATAGGTGTGACAGAGACCCAAGCTGAGCCTAACTGGACAAAAGGGTCTGGGGCAAGCGGGGGTTaGGCAGTCAGGGCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DFIGVTETQAEPNWTKGSGASGG*AVRAPG Trigger: GCCTGGAGCCCTGACTGCCAAACCCCCGCTTGCCCC...AGACCCTTTTGTCCAGTTAGGCTCAGCTTGGGTCTCTGTCACACCTATGAAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTCCCCTTACTCAACATCTCCAGCCACTaGAGCTCCCGCTGGCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEPMESQTLCLPPPLPLLNISSH*SSRWRA Trigger: GGCTCGCCAGCGGGAGCTCAAGTGGCTGGAGATGTT...GAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS-3UTR CAA 90 bp | CGCCTGATCTCCTTGCTGGTGCCTAGTGGGGTGCTGTTACCAGTAGGTGAAGGATCCAGCTCCTCAAACTaGCCAGGGTTCTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLISLLVPSGVLLPVGEGSSSSN*PGFCSR Trigger: CCTGGAGCAGAACCCTGGCAAGTTTGAGGAGCTGGA...TCCTTCACCTACTGGTAACAGCACCCCACTAGGCACCAGCAAGGAGATCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205620.2 |
||
| CDS-3UTR CAA 90 bp | AAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGTGCCTGCCTCCCCCACTGCCGCCTGATCTCCTaGCTGGTGCCTAGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KTCRLNLWKVRLCACLPHCRLIS*LVPSGV Trigger: CACCCCACTAGGCACCAGCAAGGAGATCAGGCGGCA...GTGGGGGAGGCAGGCACAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS GCA 90 bp | TTGCCAGGGTTCTGCTCCAGGAGTTCCTTGCTATTAGACAGGTACTaGCAGGCCTTGGCTCTCAGAGAGGAGGGGATTCCTTTCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGFCSRSSLLLDRY*QALALREEGIPFRQ Trigger: CTGCCGGAAAGGAATCCCCTCCTCTCTGAGAGCCAAGGCCTGGCAGTACCTGTCTAATAGCAAGGAACTCCTGGAGCAGAACCCTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
||
| CDS TCA 90 bp | ATACTTGTCCGTCTTGCGCAGGGCCATCCCATTTATCTCCGAGTCTaGACCCATGGAGCTCACATCATCCGGCAAGGACTCCAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILVRLAQGHPIYLRV*THGAHIIRQGLQGP Trigger: GGGACCTTGGAGTCCTTGCCGGATGATGTGAGCTCCATGGGTTCAGACTCGGAGATAAATGGGATGGCCCTGCGCAAGACGGACAAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | AGCTGTCCCTTGCACTGTGGCTGTCCTGGCCATGTACGGATCAGCAGCTGGCAATGCTCCAGGAGTTCCTaGCTATTAGACAGGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPLHCGCPGHVRISSWQCSRSS*LLDRYC Trigger: GCAGTACCTGTCTAATAGCAAGGAACTCCTGGAGCA...TTGCCAGCTGCTGATCCGTACATGGCCAGGACAGCCACAGTGCAAGGGACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCGGGAGCCTCTGCTCTaGAGACTAGGGAGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NQWSRCSCQDLQTEPMESREPLL*RLGRLR Trigger: CCTCAGCCTCCCTAGTCTCAAGAGCAGAGGCTCCCG...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | TCCCCCACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATTCCCGCTCCTTCTCTaGTCTCTGCCGCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPTPLTLQHSSNNKAGDRFPLLL*SLPLLL Trigger: GAGAAGGAGCGGCAGAGACAAGAGAAGGAGCGGGAA...TCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 90 bp | TTCTCGCCACTTCTTCAGTTGGGCTGCATTCTCCCGCTCAATCCATaGTTCTGTCACTGGGAGGTTGGTTACCTCATGCACCAGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSPLLQLGCILPLNP*FCHWEVGYLMHQEV Trigger: GACTTCCTGGTGCATGAGGTAACCAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTTCCAGCTCCTCAAACTaGCCAGGGTTCTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NQWSRCSCQDLQTEPMESSSSSN*PGFCSR Trigger: CCTGGAGCAGAACCCTGGCAAGTTTGAGGAGCTGGA...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | AACCAGTGGTCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTTCGCCACTTCTTCAGTaGGGCTGCATTCTCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NQWSRCSCQDLQTEPMESSPLLQ*GCILPL Trigger: GAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGA...ACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGACCACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 90 bp | ATACTGCAGCTCTCCTCTAGTTTCTCGCCACTTCTTCAGTTGGGCTaGATTCTCCCGCTCAATCCATGCTTCTGTCACTGGGAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILQLSSSFSPLLQLG*ILPLNPCFCHWEVG Trigger: ACCAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAGTGGCGAGAAACTAGAGGAGAGCTGCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS-3UTR CAA 90 bp | TCCAGATGTTCCTGCCAAGACCTGCAGACTGAACCTATGGAAAGTCAGACTTTGCCAAGGAAACCATACTaGTCCGTCTTGCGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCSCQDLQTEPMESQTLPRKPY*SVLRRA Trigger: GGCCCTGCGCAAGACGGACAAGTATGGTTTCCTTGG...CAAAGTCTGACTTTCCATAGGTTCAGTCTGCAGGTCTTGGCAGGAACATCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 90 bp | TGTTGTGGTAGGTTTCGAAGCTGCTCCATGGTTTCATACATGCCTTaGCATGAGCGCAGCTTTTCCACAGAACCCAGTGTGTGCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CCGRFRSCSMVSYMP*HERSFSTEPSVCRS Trigger: ACTGCGGCACACACTGGGTTCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAAACCTACCACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
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| CDS GCA 90 bp | TCTGTCACTGGGAGGTTGGTTACCTCATGCACCAGGAAGTCCTCCTaGATACACTGTTGTGGTAGGTTTCGAAGCTGCTCCATGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVTGRLVTSCTRKSS*IHCCGRFRSCSMVS Trigger: TGAAACCATGGAGCAGCTTCGAAACCTACCACAACAGTGTATGCAGGAGGACTTCCTGGTGCATGAGGTAACCAACCTCCCAGTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 90 bp | TACACTGTTGTGGTAGGTTTCGAAGCTGCTCCATGGTTTCATACATaGCTTGACATGAGCGCAGCTTTTCCACAGAACCCAGTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YTVVVGFEAAPWFHT*LDMSAAFPQNPVCA Trigger: GGCACACACTGGGTTCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAAACCTACCACAACAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
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| CDS-3UTR CAA 90 bp | AGCGCCACAAAACTGCCACTGAGGTGGGACCAAGACAGAAGAGAATGTAAACATCGTGGAGCCCAGGTCTaGAAAGTTTTCAACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SATKLPLRWDQDRRECKHRGAQV*KVFNRL Trigger: GAGCCTGTTGAAAACTTTCAAGACCTGGGCTCCACG...ATGTTTACATTCTCTTCTGTCTTGGTCCCACCTCAGTGGCAGTTTTGTGGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 90 bp | AGTCCTCCTGCATACACTGTTGTGGTAGGTTTCGAAGCTGCTCCATaGTTTCATACATGCCTTGACATGAGCGCAGCTTTTCCACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPPAYTVVVGFEAAP*FHTCLDMSAAFPQN Trigger: GTTCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAAACCTACCACAACAGTGTATGCAGGAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCCCTTACTCTACAGCACTCTTCAAATAACAAGGCGGGAGACAGATATAACCCATACTTGTCCGTCTaGCGCAGGGCCATCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TPLTLQHSSNNKAGDRYNPYLSV*RRAIPF Trigger: AAATGGGATGGCCCTGCGCAAGACGGACAAGTATGG...GTTATATCTGTCTCCCGCCTTGTTATTTGAAGAGTGCTGTAGAGTAAGGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CCA 72 bp | GGCGGGCCGAGCCTCCCCGGGGGCCACCAATTCGACTaGGGCCGAAGTGGCTGTAGTCACTGGCGGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GGPSLPGGHQFD*GRSGCSHWRSR Trigger: CCGGGACCGCCAGTGACTACAGCCACTTCGGCCCCAGTCGAATTGGTGGCCCCCGGGGAGGCTCGGCCCGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 72 bp | TCGGAGCCGGAGCCTCGCATGTCCCGGGAGGGCCTGTaGCAGGCCCTGAGGGGTCCTCAGGCACCGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEPEPRMSREGL*QALRGPQAPTL Trigger: CAGGGTCGGTGCCTGAGGACCCCTCAGGGCCTGTCACAGGCCCTCCCGGGACATGCGAGGCTCCGGCTCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | GCGGGGGTTTGGCAGTCAGGGCTCCAGGCGCCATTCTaGAAGGTGTCCGAGTGGGGGTCCCTGGTCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGVWQSGLQAPF*KVSEWGSLVLG Trigger: TCCCAGGACCAGGGACCCCCACTCGGACACCTTCCAGAATGGCGCCTGGAGCCCTGACTGCCAAACCCCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 72 bp | TCGGCTCCTGTTTCTGCCGCTGGTGCGGGGAACTCTTaGGTCTTCGCGGCTTCGGGTGAGGCCTCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAPVSAAGAGNS*VFAASGEASRV Trigger: GACCCTGGAGGCCTCACCCGAAGCCGCGAAGACGCAAGAGTTCCCCGCACCAGCGGCAGAAACAGGAGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 72 bp | CCTGTCCCCACCATCATGGGATGCCGGGGGCCCATCTaGCCTTCGACGCAAGGACAGTTTCCGGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVPTIMGCRGPI*PSTQGQFPALA Trigger: GGCCAAGGCCGGAAACTGTCCTTGCGTCGAAGGGCAGATGGGCCCCCGGCATCCCATGATGGTGGGGACAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | CATGAGGCTCACGGAGTCCAAGTAGCTCAGGGTGTCTaGGGCCTGACCCCGAGGCCCCGAGATGCCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HEAHGVQVAQGV*GLTPRPRDARS Trigger: GGACCTGGCATCTCGGGGCCTCGGGGTCAGGCCCCAGACACCCTGAGCTACTTGGACTCCGTGAGCCTCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | CAAAGCCACCGACGTCTCGGCTCCTGTTTCTGCCGCTaGTGCGGGGAACTCTTGCGTCTTCGCGGCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSHRRLGSCFCR*CGELLRLRGFG Trigger: CCCGAAGCCGCGAAGACGCAAGAGTTCCCCGCACCAGCGGCAGAAACAGGAGCCGAGACGTCGGTGGCTTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | TGGTGCGGGGAACTCTTGCGTCTTCGCGGCTTCGGGTaGGGCCTCCAGGGTCAGCATCACTACCGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WCGELLRLRGFG*GLQGQHHYRAA Trigger: AGCAGCACGGTAGTGATGCTGACCCTGGAGGCCTCACCCGAAGCCGCGAAGACGCAAGAGTTCCCCGCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 72 bp | CAAAGCCAAAGCCACCGACGTCTCGGCTCCTGTTTCTaGCGCTGGTGCGGGGAACTCTTGCGTCTTCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSQSHRRLGSCF*RWCGELLRLRG Trigger: GCCGCGAAGACGCAAGAGTTCCCCGCACCAGCGGCAGAAACAGGAGCCGAGACGTCGGTGGCTTTGGCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | GCCCAGGTCTTGAAAGTTTTCAACAGGCTCCGGAGCTaGGGTCACTGTCACCACAGCCACCGGAGTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQVLKVFNRLRS*GHCHHSHRSRS Trigger: GCTCCGACTCCGGTGGCTGTGGTGACAGTGACCCCAGCTCCGGAGCCTGTTGAAAACTTTCAAGACCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | CCCGAGGCCCCGAGATGCCAGGTCCTAGACTGGACGTaGAGCCCAGGTCTTGAAAGTTTTCAACAGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PEAPRCQVLDWT*SPGLESFQQAP Trigger: CGGAGCCTGTTGAAAACTTTCAAGACCTGGGCTCCACGTCCAGTCTAGGACCTGGCATCTCGGGGCCTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | GGCGATGCAGGTCCTTCTCAATCACATCGAGCCACTTaGGGTCCCCAGCAGCCCGCTCCAGCTCCTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GDAGPSQSHRAT*GPQQPAPAPQT Trigger: AGTTTGAGGAGCTGGAGCGGGCTGCTGGGGACCCCAAGTGGCTCGATGTGATTGAGAAGGACCTGCATCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
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| CDS CAA 90 bp | CGCCGTGACAGCCACTTATCCCAGTTACTGAACATCTCCAGCCACTaGAGCTCCCGCTGGCGAGCCACATCCACCGGAATAGAGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRDSHLSQLLNISSH*SSRWRATSTGIELS Trigger: AGAGAGCTCTATTCCGGTGGATGTGGCTCGCCAGCGGGAGCTCAAGTGGCTGGAGATGTTCAGTAACTGGGATAAGTGGCTGTCACGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | CCTGGGACAGGAGAGGCTCGAACCTCTTCCGTCTTTTaGGTGTCTGTCCCCAAAGCCAAAGCCACCGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGTGEARTSSVF*VSVPKAKATDV Trigger: GACGTCGGTGGCTTTGGCTTTGGGGACAGACACTCAAAAGACGGAAGAGGTTCGAGCCTCTCCTGTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | GGAGCTCACATCATCCGGCAAGGACTCCAAGGTCCCTaGCATGAGGCTCACGGAGTCCAAGTAGCTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAHIIRQGLQGP*HEAHGVQVAQG Trigger: ACCCTGAGCTACTTGGACTCCGTGAGCCTCATGTCAGGGACCTTGGAGTCCTTGCCGGATGATGTGAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | ATGCCAGGTCCTAGACTGGACGTGGAGCCCAGGTCTTaGAAGTTTTCAACAGGCTCCGGAGCTGGGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: MPGPRLDVEPRS*KFSTGSGAGVT Trigger: AGTGACCCCAGCTCCGGAGCCTGTTGAAAACTTTCAAGACCTGGGCTCCACGTCCAGTCTAGGACCTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | CGTCTTGCGCAGGGCCATCCCATTTATCTCCGAGTCTaGACCCATGGAGCTCACATCATCCGGCAAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: RLAQGHPIYLRV*THGAHIIRQGL Trigger: GAGTCCTTGCCGGATGATGTGAGCTCCATGGGTTCAGACTCGGAGATAAATGGGATGGCCCTGCGCAAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS TCA 72 bp | CTGAAGCCCAGGGGAGGGTGCGGGCAAAGATGCACATaGACCACTCTGTCATGTAGAGCACAGGGTCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LKPRGGCGQRCT*TTLSCRAQGQC Trigger: GCATTGACCCTGTGCTCTACATGACAGAGTGGTTCATGTGCATCTTTGCCCGCACCCTCCCCTGGGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | GCAGGGCCATCCCATTTATCTCCGAGTCTGAACCCATaGAGCTCACATCATCCGGCAAGGACTCCAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGPSHLSPSLNP*SSHHPARTPRS Trigger: GGACCTTGGAGTCCTTGCCGGATGATGTGAGCTCCATGGGTTCAGACTCGGAGATAAATGGGATGGCCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | CAGTTACTGAACATCTCCAGCCACTTGAGCTCCCGCTaGCGAGCCACATCCACCGGAATAGAGCTCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLLNISSHLSSR*RATSTGIELSR Trigger: CCTAGAGAGCTCTATTCCGGTGGATGTGGCTCGCCAGCGGGAGCTCAAGTGGCTGGAGATGTTCAGTAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CAA 72 bp | TCCTGGGACAGGAGAGGCTCGAACCTCTTCCGTCTTTaGAGTGTCTGTCCCCAAAGCCAAAGCCACCGACGT | + |
|
Preference number: 6 (lower is better) Translates to: SWDRRGSNLFRL*SVCPQSQSHRR Trigger: ACGTCGGTGGCTTTGGCTTTGGGGACAGACACTCAAAAGACGGAAGAGGTTCGAGCCTCTCCTGTCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS GCA 72 bp | ACTGGCTGCCCCCAAGGAAACCATACTTGTCCGTCTTaGGCAGGGCCATCCCATTTATCTCCGAGTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TGCPQGNHTCPS*AGPSHLSPSLN Trigger: GTTCAGACTCGGAGATAAATGGGATGGCCCTGCGCAAGACGGACAAGTATGGTTTCCTTGGGGGCAGCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CCA 72 bp | GGCTGCATTCTCCCGCTCAATCCATGCTTCTGTCACTaGGAGGTTGGTTACCTCATGCACCAGGAAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCILPLNPCFCH*EVGYLMHQEVL Trigger: GAGGACTTCCTGGTGCATGAGGTAACCAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS CAA 72 bp | AGCCACTTATCCCAGTTACTGAACATCTCCAGCCACTaGAGCTCCCGCTGGCGAGCCACATCCACCGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: SHLSQLLNISSH*SSRWRATSTGI Trigger: TATTCCGGTGGATGTGGCTCGCCAGCGGGAGCTCAAGTGGCTGGAGATGTTCAGTAACTGGGATAAGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
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| CDS GCA 72 bp | TTCTGCTCCAGGAGTTCCTTGCTATTAGACAGGTACTaGCAGGCCTTGGCTCTCAGAGAGGAGGGGATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FCSRSSLLLDRY*QALALREEGIP Trigger: AGGAATCCCCTCCTCTCTGAGAGCCAAGGCCTGGCAGTACCTGTCTAATAGCAAGGAACTCCTGGAGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
||
| CDS GCA 72 bp | GGGAGGTTGGTTACCTCATGCACCAGGAAGTCCTCCTaGATACACTGTTGTGGTAGGTTTCGAAGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLVTSCTRKSS*IHCCGRFRSCS Trigger: GGAGCAGCTTCGAAACCTACCACAACAGTGTATGCAGGAGGACTTCCTGGTGCATGAGGTAACCAACCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CAA 72 bp | TACTGGCTGCCCCCAAGGAAACCATACTTGTCCGTCTaGCGCAGGGCCATCCCATTTATCTCCGAGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YWLPPRKPYLSV*RRAIPFISESE Trigger: TTCAGACTCGGAGATAAATGGGATGGCCCTGCGCAAGACGGACAAGTATGGTTTCCTTGGGGGCAGCCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 72 bp | TTTCCGGCAGCGCAGCTTTACCTTCTGGAAACGCCGTaGCAGCCACTTATCCCAGTTACTGAACATCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPAAQLYLLETP*QPLIPVTEHLQ Trigger: CTGGAGATGTTCAGTAACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAGGTAAAGCTGCGCTGCCGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS TCA 72 bp | TCGAAGCTGCTCCATGGTTTCATACATGCCTTGACATaGGCGCAGCTTTTCCACAGAACCCAGTGTGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SKLLHGFIHALT*AQLFHRTQCVP Trigger: CGGCACACACTGGGTTCTGTGGAAAAGCTGCGCTCATGTCAAGGCATGTATGAAACCATGGAGCAGCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
||
| CDS GCA 72 bp | CTTCTTCAGTTGGGCTGCATTCTCCCGCTCAATCCATaGTTCTGTCACTGGGAGGTTGGTTACCTCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQLGCILPLNP*FCHWEVGYLMH Trigger: GTGCATGAGGTAACCAACCTCCCAGTGACAGAAGCATGGATTGAGCGGGAGAATGCAGCCCAACTGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120705.3 |
||
| CDS CCA 72 bp | GCATACACTGTTGTGGTAGGTTTCGAAGCTGCTCCATaGTTTCATACATGCCTTGACATGAGCGCAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AYTVVVGFEAAP*FHTCLDMSAAF Trigger: AAAAGCTGCGCTCATGTCAAGGCATGTATGAAACCATGGAGCAGCTTCGAAACCTACCACAACAGTGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120705.3 ENSMUST00000205620.2 |
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