Pregenerated sensors for TBATA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020096Ensembl transcript IDs: ENSMUST00000035894.12, ENSMUST00000121297.8, ENSMUST00000122261.8, ENSMUST00000126831.2, ENSMUST00000131879.8, ENSMUST00000140456.2, ENSMUST00000143207.8, ENSMUST00000148181.8, ENSMUST00000151886.8
Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGGAGTCGCTGTAGGCAGCCTGCTGGCCAGAGTGGGTGGCTTCTaGCAAATGCCTAGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: GGVAVGSLLARVGGF*QMPSEGLHPVKQPG Trigger: TCCCGGCTGCTTCACTGGATGGAGCCCCTCACTAGGCATTTGGCAGAAGCCACCCACTCTGGCCAGCAGGCTGCCTACAGCGACTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 90 bp | TCCATCTGTTTCCCGGATGTGCTCCGGGGGCTTCCTAAGCCAGGTTaGCGGCGGTGTCTGTGGCTACGGAGGGGTGGAAGGAGTACCGGA | + |
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Preference number: 1 (lower is better) Translates to: SICFPDVLRGLPKPG*RRCLWLRRGGRSTG Trigger: TCCGGTACTCCTTCCACCCCTCCGTAGCCACAGACACCGCCGGCAACCTGGCTTAGGAAGCCCCCGGAGCACATCCGGGAAACAGATGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 90 bp | TCCCCACCCTGGAGCTCCAGGAATCTGGAAATGTTTGCCAGGAGGTaGGGGAGTCGCTGTAGGCAGCCTGCTGGCCAGAGTGGGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SPPWSSRNLEMFARR*GSRCRQPAGQSGWL Trigger: AAGCCACCCACTCTGGCCAGCAGGCTGCCTACAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGGAGCTCCAGGGTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 90 bp | GAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTTGGTCCCTAGCTaGTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: EGLHPVKQPGTLVPS*FVKGLFCGLRSSSG Trigger: GCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGCAGCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 90 bp | CTCTTGAGGCTCTTGAAGCTCTTGGAGATGGTTCCAGAGCTTCTCTaGTGGGATGGAGGAAAGGGGCTGGGGGATAAGCTGAGCCACGGC | + |
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Preference number: 1 (lower is better) Translates to: LLRLLKLLEMVPELL*WDGGKGLGDKLSHG Trigger: GCCGTGGCTCAGCTTATCCCCCAGCCCCTTTCCTCCATCCCAGCAGAGAAGCTCTGGAACCATCTCCAAGAGCTTCAAGAGCCTCAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 90 bp | TCTCCTCTGGGTCCTCGCTGGGATGCACCAGGAGGACTTGGGCTTTaGCTATGTACTCTGGTTTGTCTGTTTTGGGTAGAGGTGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: SPLGPRWDAPGGLGL*LCTLVCLFWVEVVT Trigger: GGTCACCACCTCTACCCAAAACAGACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACCCAGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 90 bp | GGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GSLRGGSSFCSSGFG*ISLVKTVTREARSF Trigger: GAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
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| 3UTR CCA 90 bp | AGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: RRFPQRWLFLLLIGL*LDFLSEDSHSGSQV Trigger: GACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
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| 3UTR GCA 90 bp | CAGCTTTCAGCCTTGGTCGTTTTCTCCTCTGGGTCCTCGCTGGGATaGACCAGGAGGACTTGGGCTTTGCCTATGTACTCTGGTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QLSALVVFSSGSSLG*TRRTWALPMYSGLS Trigger: AGACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 90 bp | CAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTaGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGATTTTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QGIRQVGNSCFRGCF*EPFLDFSARCDFVF Trigger: AAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR CCA 90 bp | AGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTaGATTTCTCTGCTAGGTGTGATTTTGTGTTTCTTTGATTTTCGC | + |
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Preference number: 1 (lower is better) Translates to: RLGTVALEGVSGNPS*ISLLGVILCFFDFR Trigger: GCGAAAATCAAAGAAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGGAGCTCCAGGAATCTGGAAATGTTTGCCAGGAGGTGGGGGAGTCGCTGCTCCCCTCCCCAAGCTaGGCGGCTGCCTTGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TLELQESGNVCQEVGESLLPSPS*AAALEL Trigger: TAGCTCCAAGGCAGCCGCTCAGCTTGGGGAGGGGAG...CAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGGAGCTCCAGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTCCTTCCCCTCCCGTGCCAGCAGCTGAGCATTGGGGAGACTTAAGAAGGGTCCTTCCCCTCCCGTaGCAGCAGCTGAGCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGPSPPVPAAEHWGDLRRVLPLP*QQLSIG Trigger: CCCAATGCTCAGCTGCTGGCACGGGAGGGGAAGGAC...CCTTCTTAAGTCTCCCCAATGCTCAGCTGCTGGCACGGGAGGGGAAGGACCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCTCCCCTCCCCAAGCTaGGCGGCTGCCTTGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SKREGRILFSTVGGQGLELPSPS*AAALEL Trigger: TAGCTCCAAGGCAGCCGCTCAGCTTGGGGAGGGGAG...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCAGCCTTGGTCGTTTTCTCCTCTGGGTCCTCGCTGGGATGCACCAGGAGCTTCCTAAGCCAGGTTaGCGGCGGTGTCTGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: AFSLGRFLLWVLAGMHQELPKPG*RRCLWL Trigger: TAGCCACAGACACCGCCGGCAACCTGGCTTAGGAAG...CTCCTGGTGCATCCCAGCGAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCACTCCCCTCCCCAAGCTaGGCGGCTGCCTTGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KREGRILFSTVGGQGLESLPSPS*AAALEL Trigger: TAGCTCCAAGGCAGCCGCTCAGCTTGGGGAGGGGAG...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAATGCCTAGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTTGGTCTTGGAGGCCAGGGGCTaGAGTCAAGGTAGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: CQMPSEGLHPVKQPGTLVLEARG*SQGRRT Trigger: TGTCCTTCTACCTTGACTCCAGCCCCTGGCCTCCAA...GACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTCACTAGGCATTTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CAA 90 bp | CAAATGCCTAGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTaGGTCCCTAGCTGCTTTGTCAAAGGACTTTTCTGTGGCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: QMPSEGLHPVKQPGT*VPSCFVKGLFCGLR Trigger: CCGGAGGCCACAGAAAAGTCCTTTGACAAAGCAGCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTCACTAGGCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCCCAAGCTGAGCGGCTaGCTTGGAGCTAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SKREGRILFSTVGGQGLEPKLSG*LGARQK Trigger: CTTCTGCCTAGCTCCAAGGCAGCCGCTCAGCTTGGG...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCCAAGCTGAGCGGCTaGCTTGGAGCTAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ELPSSKREGRILFSTVGGPKLSG*LGARQK Trigger: CTTCTGCCTAGCTCCAAGGCAGCCGCTCAGCTTGGG...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAAGTCCTTCCCCTCCCGTaGCAGCAGCTGAGCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: GQGIRQVGNSCFRGCFWEVLPLP*QQLSIG Trigger: CCCAATGCTCAGCTGCTGGCACGGGAGGGGAAGGAC...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR CCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTTGGAGGCCAGGGGCTaGAGTCAAGGTAGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: HPRGRAGFYLVLLEARGWLEARG*SQGRRT Trigger: TGTCCTTCTACCTTGACTCCAGCCCCTGGCCTCCAA...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| 3UTR CAA 90 bp | CCTAGTCTTCTTCAGGGATGGACTGTAGGCTGCCTCTTGTGTCTCTaGAGGCTCTTGAAGCTCTTGGAGATGGTTCCAGAGCTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PSLLQGWTVGCLLCL*RLLKLLEMVPELLC Trigger: GCAGAGAAGCTCTGGAACCATCTCCAAGAGCTTCAAGAGCCTCAAGAGACACAAGAGGCAGCCTACAGTCCATCCCTGAAGAAGACTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTCTGGGCTCTTCAGCTTTCAGCCTTGGTCGTTTTCTCCTCTGGGTCCTCGGAGGACTTGGGCTTTaGCTATGTACTCTGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SGLGSSAFSLGRFLLWVLGGLGL*LCTLVC Trigger: ACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCC...GAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTGAAGAGCCCAGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGTCCTTCCCCTCCCGTaGCAGCAGCTGAGCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: EKLYSRVKALDRLGTVALVLPLP*QQLSIG Trigger: CCCAATGCTCAGCTGCTGGCACGGGAGGGGAAGGAC...TAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGACCTTGGTCCCTAGCTaGTTTGTCAAAGGACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: HPRGRAGFYLVLLEARGWTLVPS*FVKGLF Trigger: GAAAAGTCCTTTGACAAAGCAGCTAGGGACCAAGGT...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATGTACTCTGGTTTGTCTGTTTTGGGTAGAGGTGGTGACCTAGTCTTCTTCAGAGTGGGTGGCTTCTaGCAAATGCCTAGTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PMYSGLSVLGRGGDLVFFRVGGF*QMPSEG Trigger: CCCCTCACTAGGCATTTGGCAGAAGCCACCCACTCT...GAAGAAGACTAGGTCACCACCTCTACCCAAAACAGACAAACCAGAGTACATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACAGGCTCCATTCTTTGTaGAACACCAACCTCATCGGG | + |
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Preference number: 2 (lower is better) Translates to: VKALDRLGTVALEGVSGNRLHSL*NTNLIG Trigger: CCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCT...GTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAAAGGCTCCATTCTTTGTaGAACACCAACCTCATCGGG | + |
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Preference number: 2 (lower is better) Translates to: GQGIRQVGNSCFRGCFWERLHSL*NTNLIG Trigger: CCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCT...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACAGGTTGGGAACAGTTaGTTTAGAGGGTGTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GQGIRQVGNSCFRGCFWEQVGNS*FRGCFW Trigger: CCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTG...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGTCTGGGAACCCTTCTTaGATTTCTCTGCTAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LGTVALEGVSGNPSWISLSGNPS*ISLLGV Trigger: CACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGA...CAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTATCTGGGAACCCTTCTTaGATTTCTCTGCTAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GTVALEGVSGNPSWISLLSGNPS*ISLLGV Trigger: CACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGA...TAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTACCAGCAGCTGAGCATTaGGGAGACTTAAGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: EKLYSRVKALDRLGTVALPAAEH*GDLRRP Trigger: AGGCCTTCTTAAGTCTCCCCAATGCTCAGCTGCTGG...TAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGGATTTTGTGTTTCTTTaGTTTTCGCTGTCACCTTCG | + |
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Preference number: 2 (lower is better) Translates to: LDRLGTVALEGVSGNPSWDFVFL*FSLSPS Trigger: CGAAGGTGACAGCGAAAATCAAAGAAACACAAAATC...CCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAGGGATTTTGTGTTTCTTTaGTTTTCGCTGTCACCTTCG | + |
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Preference number: 2 (lower is better) Translates to: NSCFRGCFWEPFLDFSARDFVFL*FSLSPS Trigger: CGAAGGTGACAGCGAAAATCAAAGAAACACAAAATC...CCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| 3UTR GCA 72 bp | TTCCCGGATGTGCTCCGGGGGCTTCCTAAGCCAGGTTaGCGGCGGTGTCTGTGGCTACGGAGGGGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: FPDVLRGLPKPG*RRCLWLRRGGR Trigger: CCTTCCACCCCTCCGTAGCCACAGACACCGCCGGCAACCTGGCTTAGGAAGCCCCCGGAGCACATCCGGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 72 bp | CGGGGGCTTCCTAAGCCAGGTTGCCGGCGGTGTCTGTaGCTACGGAGGGGTGGAAGGAGTACCGGAGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: RGLPKPGCRRCL*LRRGGRSTGGR Trigger: CCTACCTCCGGTACTCCTTCCACCCCTCCGTAGCCACAGACACCGCCGGCAACCTGGCTTAGGAAGCCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 72 bp | GCTGTAGGCAGCCTGCTGGCCAGAGTGGGTGGCTTCTaGCAAATGCCTAGTGAGGGGCTCCATCCAGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AVGSLLARVGGF*QMPSEGLHPVK Trigger: CTTCACTGGATGGAGCCCCTCACTAGGCATTTGGCAGAAGCCACCCACTCTGGCCAGCAGGCTGCCTACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 72 bp | TGGAGCTCCAGGAATCTGGAAATGTTTGCCAGGAGGTaGGGGAGTCGCTGTAGGCAGCCTGCTGGCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: WSSRNLEMFARR*GSRCRQPAGQS Trigger: ACTCTGGCCAGCAGGCTGCCTACAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGGAGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CCA 72 bp | GGCTCTTCAGCTTTCAGCCTTGGTCGTTTTCTCCTCTaGGTCCTCGCTGGGATGCACCAGGAGGACTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GSSAFSLGRFLL*VLAGMHQEDLG Trigger: GCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTGAAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAATCTGGAAATGTTTGCCAGGAGGTGGGGGAGTCGCTGTAGGCAGCCTGAAGCAGCCGGGAACCTaGGTCCCTAGCTGCTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: PGIWKCLPGGGGVAVGSLKQPGT*VPSCFV Trigger: GACAAAGCAGCTAGGGACCAAGGTTCCCGGCTGCTT...CAGGCTGCCTACAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGGCACGCTGGGATGTTTaGGGTGGTGACTTGGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: HPRGRAGFYLVLLEARGWARWDV*GGDLGY Trigger: GTACCCCAAGTCACCACCCAAAACATCCCAGCGTGC...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 72 bp | CATCCAGTGAAGCAGCCGGGAACCTTGGTCCCTAGCTaGTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: HPVKQPGTLVPS*FVKGLFCGLRS Trigger: TGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGCAGCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR GCA 72 bp | GGTCCTCGCTGGGATGCACCAGGAGGACTTGGGCTTTaGCTATGTACTCTGGTTTGTCTGTTTTGGGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPRWDAPGGLGL*LCTLVCLFWVE Trigger: CTCTACCCAAAACAGACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| 3UTR CCA 72 bp | AGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RGGSSFCSSGFG*ISLVKTVTREA Trigger: GGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| 3UTR CCA 72 bp | CCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQRWLFLLLIGL*LDFLSEDSHSG Trigger: TCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTCTGGGCTCTTCAGCTTTCAGCCTTGGTCGTTTTCTCCTCTGGGTCCTCTGTCTCTTGAGGCTCTaGAAGCTCTTGGAGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SGLGSSAFSLGRFLLWVLCLLRL*KLLEMV Trigger: AACCATCTCCAAGAGCTTCAAGAGCCTCAAGAGACA...GAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTGAAGAGCCCAGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGCTTTCAGCCTTGGTCGTTTTCTCCTCTGGGTCCTCGCTGGGATGCACCCTAAATCTTTTTCTTTaGATGGAGCATAAAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LQLSALVVFSSGSSLGCTLNLFL*MEHKAA Trigger: GGCTGCTTTATGCTCCATCAAAAGAAAAAGATTTAG...GGTGCATCCCAGCGAGGACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTCTAGGCTCCATTCTTaGTGCAACACCAACCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RQVGNSCFRGCFWEPFLDSRLHS*CNTNLI Trigger: GATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGA...ATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| 3UTR GCA 72 bp | TTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTaGTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FKGQGIRQVGNS*FRGCFWEPFLD Trigger: ATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR CCA 72 bp | AGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTaGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RQVGNSCFRGCF*EPFLDFSARCD Trigger: ATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAAAGGCATTAGACAGGTaGGGAACAGTTGCTTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTVALEGVSGNPSWISLLKALDR*GTVALE Trigger: CTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTT...TAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACTGCTAGGTGTGATTTaGTGTTTCTTTGATTTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGIRQVGNSCFRGCFWELLGVI*CFFDFR Trigger: GCGAAAATCAAAGAAACACAAAATCACACCTAGCAG...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCCTGCTAGGTGTGATTTaGTGTTTCTTTGATTTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: FKGQGIRQVGNSCFRGCFLLGVI*CFFDFR Trigger: GCGAAAATCAAAGAAACACAAAATCACACCTAGCAG...GAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGATTTTGTGTTTCTGCTAGGTGTGATTTaGTGTTTCTTTGATTTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GCFWEPFLDFSARCDFVFLLGVI*CFFDFR Trigger: GCGAAAATCAAAGAAACACAAAATCACACCTAGCAG...AAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR CCA 72 bp | ACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTaGATTTCTCTGCTAGGTGTGATTTTGTGTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TVALEGVSGNPS*ISLLGVILCFF Trigger: AAAGAAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTAGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTTGGTCCCTAGCGAAGGGTGGACCCGCTaGCCCTGGCGGTTGCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: MPSEGLHPVKQPGTLVPSEGWTR*PWRLRR Trigger: CCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTC...GCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTCACTAGGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGAATCTGGAAATGTTTGCCAGGAGGTGGGGGAGTCGCTGTAGGCAGCCTGGGCGGTTGCGACGGGTaGGGGCTTGGCTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGIWKCLPGGGGVAVGSLGGCDG*GLGWKQ Trigger: CTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCC...CAGGCTGCCTACAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| 3UTR CAA 72 bp | CTCAGAGACGCACGGAGTCCTGCACGCTGGGATGTTTaGGGTGGTGACTTGGGGTACCCCAAGAGCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRDARSPARWDV*GGDLGYPKSLP Trigger: GGGGAGGCTCTTGGGGTACCCCAAGTCACCACCCAAAACATCCCAGCGTGCAGGACTCCGTGCGTCTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGGGCGGTTGCGACGGGTaGGGGCTTGGCTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWGGCDG*GLGWKQ Trigger: CTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCC...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCATCCCCGTGGCTCCTTaGAAGGTTCTCCGGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGGGSLRGGSSFCSSGFGIPVAP*KVLRLR Trigger: ACGAAGCCGGAGAACCTTCCAAGGAGCCACGGGGAT...GCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCCGCTGTGGTTGGGGGTaGTGCCTCGAGAAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGGGSLRGGSSFCSSGFGRCGWG*CLEKKE Trigger: TTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCG...GCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGCTGTGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FAVTFEVMRVLPLPCQQLWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...CAGCTGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAAGGGTGGACCCGCTaGCCCTGGCGGTTGCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLEGWTR*PWRLRR Trigger: CCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAGGCGGTTGCGACGGGTaGGGGCTTGGCTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQGGCDG*GLGWKQ Trigger: CTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCC...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCACCACAGTCTCTTTCTaGAGCCCAACATCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGGGSLRGGSSFCSSGFGTTVSF*SPTSPW Trigger: CCACGGGGATGTTGGGCTCCAGAAAGAGACTGTGGT...GCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCGAAGGGTGGACCCGCTaGCCCTGGCGGTTGCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAEGWTR*PWRLRR Trigger: CCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTC...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGAGCTCCAGGAATCTGGAAATGTTTGCCAGGAGGTGGGGGAGTCGCTGAGCAGCTCCTGGTCCTaGAGAATGGAGGCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TLELQESGNVCQEVGESLSSSWS*RMEAWT Trigger: AGTCCAAGCCTCCATTCTGCAGGACCAGGAGCTGCT...CAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGGAGCTCCAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGCTACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCHLRGYEGPSPPVPAATVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...AGCTGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGCTGGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FAVTFEVMRVLPLPCQQLVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...CAGCTGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTGGAGCTAGGCAGAAGTCTCCGTGCTCTGGTCTGGGCTCTTCAGCTTTCGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGARQKSPCSGLGSSAFAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...GAAAGCTGAAGAGCCCAGACCAGAGCACGGAGACTTCTGCCTAGCTCCAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | GATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCACAGGAAAGATGGGGGTaGGGGGCGGTAGGTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DFRCHLRGYEGPSPPVPAQERWG*GAVGVV Trigger: AACAACACCTACCGCCCCCCACCCCCATCTTTCCTG...TGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAGCTGGAAAGAGGTGGTaGGGGGCAGGGAGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KREGRILFSTVGGQGLESAGKRW*GAGSAP Trigger: TGGAGCACTCCCTGCCCCTCACCACCTCTTTCCAGC...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
||
| CDS-3UTR CCA 90 bp | TTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFAVTFEVMRVLPLPCQMSHSL*LGVVPR Trigger: TCGAGGCACCACCCCCAACCACAGCGAGTGACTCAT...CTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGCTGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRCHLRGYEGPSPPVPAAVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...AGCTGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCGACGGGTGAGGGCTTaGCTGGAAGCAGGGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLERRVRA*LEAGIS Trigger: GCTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCG...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGCCTACCGGTCTCAGCTaGGTATTTGGCCCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLPTGLS*VFGPLL Trigger: GAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGG...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAGTGAGGGGCAGGGAGTaGTCCAGGTCCTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQVRGRE*SRSSLP Trigger: AGGAAGAGAGGACCTGGAGCACTCCCTGCCCCTCAC...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
||
| CDS-3UTR GCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCGGGTCCTCGCTGGGATaGACCAGGAGGACTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGGSSLG*TRRTWA Trigger: AGCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACCC...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGGGCTTCGTCTCTGGCTaGGGCTCTGCCTTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLIFAVTFEVMRVLPLPGFVSG*GSAFGL Trigger: GAGTCCAAAGGCAGAGCCCCAGCCAGAGACGAAGCC...CGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGGCTTCGTCTCTGGCTaGGGCTCTGCCTTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLGFVSG*GSAFGL Trigger: GAGTCCAAAGGCAGAGCCCCAGCCAGAGACGAAGCC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCCAGGGCTTCGTCTCTGGCTaGGGCTCTGCCTTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVKTVTREARSFSFFLQGFVSG*GSAFGL Trigger: GAGTCCAAAGGCAGAGCCCCAGCCAGAGACGAAGCC...CTGGAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCTCCGGCTTCGTCTCTaGCTGGGGCTCTGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEALRLRL*LGLCLW Trigger: CCAAAGGCAGAGCCCCAGCCAGAGACGAAGCCGGAG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGCAGGGTATGCTTGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSKDFSVASGQVAAGYAWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...AGCATACCCTGCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTATGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRGGSSFCSSGFGWISLWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...TAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | GATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFRCHLRGYEGPSPPVPAVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...TGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLEAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGCAGGGTATGCGAGTCCAGCAGCTCCTaGTCCTGCAGAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFVKGLFCGLRSSSGRVCESSSS*SCRMEA Trigger: AGCCTCCATTCTGCAGGACCAGGAGCTGCTGGACTC...GCATACCCTGCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTACTGGGTGTTGGTTGTaGTGTTTGGGGCTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSLRGGSSFCSSGFGWITGCWL*CLGLCG Trigger: ACCACAAAGCCCCAAACATCACAACCAACACCCAGT...AATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGTGGACCCCAGGAGCTTaGAGGAGCTGGAAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARWTPGA*RSWKEV Trigger: CACCTCTTTCCAGCTCCTTCAAGCTCCTGGGGTCCA...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
||
| CDS-3UTR TCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAATATCTGCAGAGGGAGTaGGATCCATGGGCTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQYLQRE*DPWAGP Trigger: GGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATA...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
||
| CDS-3UTR TCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCTACCGGTCTCAGCTaGGTATTTGGCCCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGPTGLS*VFGPLL Trigger: GAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGG...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTGTGGTTGGGGGTGGTaGCTCGAGAAGAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWCGWGW*LEKKEW Trigger: CCATTCCTTCTTCTCGAGGCACCACCCCCAACCACA...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTATGTGGTTGGGGGTGGTaGCTCGAGAAGAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRGGSSFCSSGFGWISLCGWGW*LEKKEW Trigger: CCATTCCTTCTTCTCGAGGCACCACCCCCAACCACA...TAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGAGCAGCTCCTGGTCCTaGAGAATGGAGGCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLESSSWS*RMEAWT Trigger: AGTCCAAGCCTCCATTCTGCAGGACCAGGAGCTGCT...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCGGCTTCGTCTCTGGCTaGGGCTCTGCCTTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGGFVSG*GSAFGL Trigger: GAGTCCAAAGGCAGAGCCCCAGCCAGAGACGAAGCC...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAATCCCCGTGGCTCCTTaGAAGGTTCTCCGGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KREGRILFSTVGGQGLESIPVAP*KVLRLR Trigger: ACGAAGCCGGAGAACCTTCCAAGGAGCCACGGGGAT...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGATCCCCGTGGCTCCTTaGAAGGTTCTCCGGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARIPVAP*KVLRLR Trigger: ACGAAGCCGGAGAACCTTCCAAGGAGCCACGGGGAT...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTTTGGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCGAGAAGAAGGAATGGTaGCTTAGGCGTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGFGWISLVKTVTREARSEKKEW*LRRPKR Trigger: CCGCTTTGGACGCCTAAGCCACCATTCCTTCTTCTC...GGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGCGCTGTGGTTGGGGGTaGTGCCTCGAGAAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARRCGWG*CLEKKE Trigger: TTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCG...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAACGCTGTGGTTGGGGGTaGTGCCTCGAGAAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQRCGWG*CLEKKE Trigger: TTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCG...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARMSHSL*LGVVPR Trigger: TCGAGGCACCACCCCCAACCACAGCGAGTGACTCAT...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTAGTGAAATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRWLFLLLIGLWLDFLSEMSHSL*LGVVPR Trigger: TCGAGGCACCACCCCCAACCACAGCGAGTGACTCAT...TTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAATGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLETVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTAGTGACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSSFCSSGFGWISLVTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...CACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLIFAVTFEVMRVLPLPAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCAGCTTCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRCHLRGYEGPSPPVPAASEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...AGCTGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS-3UTR CCA 90 bp | TCGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTTCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEEVPSEVALPSAHRALASEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...AGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCGACGGGTGAGGGCTTaGCTGGAAGCAGGGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEARRVRA*LEAGIS Trigger: GCTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCCTGGTCCTGCAGAATaGAGGCTTGGACTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLEPGPAE*RLGLLH Trigger: ATGGAGGAGTCCAAGCCTCCATTCTGCAGGACCAGG...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGGTCGTTTTCTCCTCTaGGTCCTCGCTGGGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLGRFLL*VLAGMH Trigger: GTGCATCCCAGCGAGGACCCAGAGGAGAAAACGACC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGCAGGGTATGCTAGGTTCCCTCAGAGGTaGCTCTTCCTTCTCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSKDFSVASGQVAAGYARFPQR*LFLLIG Trigger: CCCGATGAGAAGGAAGAGCCACCTCTGAGGGAACCT...AGCATACCCTGCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| 3UTR CAA 72 bp | AGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTaGGTCCCTAGCTGCTTTGTCAAAGGACTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGLHPVKQPGT*VPSCFVKGLFC Trigger: ACAGAAAAGTCCTTTGACAAAGCAGCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| 3UTR CAA 72 bp | GGGTCCTCGCTGGGATGCACCAGGAGGACTTGGGCTTaGCCTATGTACTCTGGTTTGTCTGTTTTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSLGCTRRTWA*PMYSGLSVLGR Trigger: TCTACCCAAAACAGACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCCTGGTGCATCCCAGCGAGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGGGACTCACTAGAGGATaGTCAGACAGCTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWGLTRG*SDSWFT Trigger: GGTGAACCAGCTGTCTGAGCATCCTCTAGTGAGTCC...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTGGACTCACTAGAGGATaGTCAGACAGCTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FPQRWLFLLLIGLWLDFLGLTRG*SDSWFT Trigger: GGTGAACCAGCTGTCTGAGCATCCTCTAGTGAGTCC...AAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGAGCAGCTCCTGGTCCTaGAGAATGGAGGCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLSSSWS*RMEAWT Trigger: AGTCCAAGCCTCCATTCTGCAGGACCAGGAGCTGCT...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTTCCAGAGCTTCTCTaGTGGGATGGAGGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLVPELL*WDGGKG Trigger: CCCCTTTCCTCCATCCCAGCAGAGAAGCTCTGGAAC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGACCACAGTCTCTTTCTaGAGCCCAACATCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARTTVSF*SPTSPW Trigger: CCACGGGGATGTTGGGCTCCAGAAAGAGACTGTGGT...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAACCACAGTCTCTTTCTaGAGCCCAACATCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQTTVSF*SPTSPW Trigger: CCACGGGGATGTTGGGCTCCAGAAAGAGACTGTGGT...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGCGCTGTGGTTGGGGGTaGTGCCTCGAGAAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVKALDRLGTVALEGVSGRCGWG*CLEKKE Trigger: TTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCG...CCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAMSHSL*LGVVPR Trigger: TCGAGGCACCACCCCCAACCACAGCGAGTGACTCAT...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RVKALDRLGTVALEGVSGAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGGTTCCCTCAGAGGTaGCTCTTCCTTCTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWRFPQR*LFLLLI Trigger: GATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCT...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGTCTCAGCTGAGTATTTaGCCCCCTGCTCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLSQLSI*PPALSE Trigger: CTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGA...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGTCTCAGCTGAGTATTTaGCCCCCTGCTCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARSQLSI*PPALSE Trigger: CTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGA...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGCCTGGTCCTGCAGAATaGAGGCTTGGACTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARPGPAE*RLGLLH Trigger: ATGGAGGAGTCCAAGCCTCCATTCTGCAGGACCAGG...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| 3UTR CAA 72 bp | CTTCAGGGATGGACTGTAGGCTGCCTCTTGTGTCTCTaGAGGCTCTTGAAGCTCTTGGAGATGGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQGWTVGCLLCL*RLLKLLEMVPE Trigger: CTCTGGAACCATCTCCAAGAGCTTCAAGAGCCTCAAGAGACACAAGAGGCAGCCTACAGTCCATCCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGACTGGGTGTTGGTTGTaGTGTTTGGGGCTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLETGCWL*CLGLCG Trigger: ACCACAAAGCCCCAAACATCACAACCAACACCCAGT...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR TCA 90 bp | GATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTTATCTGCAGAGGGAGTaGGATCCATGGGCTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: DFLSEDSHSGSQVLQFLPYLQRE*DPWAGP Trigger: GGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATA...AGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTTTGGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCATGTTTGGGGCTTTGTaGTCTTCAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGFGWISLVKTVTREARSMFGAL*SSAPHG Trigger: TCCATGAGGAGCTGAAGACCACAAAGCCCCAAACAT...GGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAGAGAAGAAGGAATGGTaGCTTAGGCGTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQEKKEW*LRRPKR Trigger: CCGCTTTGGACGCCTAAGCCACCATTCCTTCTTCTC...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCTCGAGAAGAAGGAATaGTGGCTTAGGCGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLELEKKE*WLRRPK Trigger: CTTTGGACGCCTAAGCCACCATTCCTTCTTCTCGAG...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRLGTVALEGVSGNPSWIWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...AATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAATGGGGACAGAGATGGTaGGCATCCCCATCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGIRQVGNSCFRGCFWEWGQRW*ASPSDS Trigger: GCTGTCTGATGGGGATGCCCACCATCTCTGTCCCCA...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLVKTVTREARSFSFFLAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...GAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VKALDRLGTVALEGVSGNAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...GTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAAGGTTCCCTCAGAGGTaGCTCTTCCTTCTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQRFPQR*LFLLLI Trigger: GATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCT...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCTCTCAGCTGAGTATTTaGCCCCCTGCTCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGSQLSI*PPALSE Trigger: CTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGA...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | CCTATGTACTCTGGTTTGTCTGTTTTGGGTAGAGGTGGTGACCTAGTCTTCTTCCGACGGGTGAGGGCTTaGCTGGAAGCAGGGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMYSGLSVLGRGGDLVFFRRVRA*LEAGIS Trigger: GCTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCG...GAAGAAGACTAGGTCACCACCTCTACCCAAAACAGACAAACCAGAGTACATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCCTGGTCCTGCAGAATaGAGGCTTGGACTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAPGPAE*RLGLLH Trigger: ATGGAGGAGTCCAAGCCTCCATTCTGCAGGACCAGG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGAAAATCAGCAGCTCCTaGTCCTGCAGAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLEKISSS*SCRMEA Trigger: AGCCTCCATTCTGCAGGACCAGGAGCTGCTGATTTT...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAAAATCAGCAGCTCCTaGTCCTGCAGAATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVLLEARGWKISSS*SCRMEA Trigger: AGCCTCCATTCTGCAGGACCAGGAGCTGCTGATTTT...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAACTGGGTGTTGGTTGTaGTGTTTGGGGCTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQTGCWL*CLGLCG Trigger: ACCACAAAGCCCCAAACATCACAACCAACACCCAGT...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR TCA 90 bp | GACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTCTTCCTCCAGGTGTCTaGGAGGACAGGAAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRLGTVALEGVSGNPSWILPPGV*EDRKDG Trigger: CCCATCTTTCCTGTCCTCTCAGACACCTGGAGGAAG...AATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR GCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCGGACTCACTAGAGGATaGTCAGACAGCTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAGLTRG*SDSWFT Trigger: GGTGAACCAGCTGTCTGAGCATCCTCTAGTGAGTCC...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGCTCGAAATCCACAATaGCTGGGACCACAGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLARNPQ*LGPQSL Trigger: AAGAGACTGTGGTCCCAGGCATTGTGGATTTCGAGC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGTGTGGTTGGGGGTGGTaGCTCGAGAAGAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRLGTVALEGVSGNPSWCGWGW*LEKKEW Trigger: CCATTCCTTCTTCTCGAGGCACCACCCCCAACCACA...CCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGGGAGGACTTGGGCTTTaGCTATGTACTCTGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLEGGLGL*LCTLVC Trigger: ACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCC...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGATTTTGTGTATCCCCGTGGCTCCTTaGAAGGTTCTCCGGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGVSGNPSWISLLGVILCIPVAP*KVLRLR Trigger: ACGAAGCCGGAGAACCTTCCAAGGAGCCACGGGGAT...ACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGATGTTTGGGGCTTTGTaGTCTTCAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKREGRILFSTVGGQGLEMFGAL*SSAPHG Trigger: TCCATGAGGAGCTGAAGACCACAAAGCCCCAAACAT...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCCAGCTCGAGAAGAAGGAATaGTGGCTTAGGCGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVKTVTREARSFSFFLQLEKKE*WLRRPK Trigger: CTTTGGACGCCTAAGCCACCATTCCTTCTTCTCGAG...CTGGAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDRLGTVALEGVSGNPSWTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...CCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSLIFAVTFEVMRVLPLTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...GAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVFKGQGIRQVGNSCFRGAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGCAGGGTATGCTTCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSKDFSVASGQVAAGYASEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...AGCATACCCTGCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGAGTCTTCTTCAGGGATaGACTGTAGGCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLSLLQG*TVGCLL Trigger: CAAGAGGCAGCCTACAGTCCATCCCTGAAGAAGACT...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| 3UTR CAA 72 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTaGGAGGCCAGGGGCTGGAGTCAAGGTAGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPRGRAGFYLVL*EARGWSQGRRT Trigger: TGTCCTTCTACCTTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | GGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTACTTCCTCCAGGTGTCTaGGAGGACAGGAAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVALEGVSGNPSWISLLLPPGV*EDRKDG Trigger: CCCATCTTTCCTGTCCTCTCAGACACCTGGAGGAAG...TAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLVFSSS*ISSKST Trigger: TGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGAC...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCCAGGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLVKTVTREARSFSFFLQVFSSS*ISSKST Trigger: TGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGAC...CTGGAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGCAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKREGRILFSTVGGQGLQSGRH*VLVVMF Trigger: AAACATCACAACCAACACCCAGTGCCTACCGCTTTG...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAACAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQQSGRH*VLVVMF Trigger: AAACATCACAACCAACACCCAGTGCCTACCGCTTTG...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTAGTGAAGACCAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RWLFLLLIGLWLDFLSEDQSGRH*VLVVMF Trigger: AAACATCACAACCAACACCCAGTGCCTACCGCTTTG...GTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATGAGAAGAAGGAATGGTaGCTTAGGCGTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQVGNSCFRGCFWEPFLDEKKEW*LRRPKR Trigger: CCGCTTTGGACGCCTAAGCCACCATTCCTTCTTCTC...ATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCTCGAGAAGAAGGAATaGTGGCTTAGGCGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEALEKKE*WLRRPK Trigger: CTTTGGACGCCTAAGCCACCATTCCTTCTTCTCGAG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGCTCGAGAAGAAGGAATaGTGGCTTAGGCGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKALDRLGTVALEGVSGLEKKE*WLRRPK Trigger: CTTTGGACGCCTAAGCCACCATTCCTTCTTCTCGAG...CCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGTVALEGVSGNPSWISTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...AGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLVKTVTREARSFSFFLVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...GAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGTCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARSEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAATCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGFYLVLLEARGWSQSEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCAGTCTTCTTCAGGGATaGACTGTAGGCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGSLLQG*TVGCLL Trigger: CAAGAGGCAGCCTACAGTCCATCCCTGAAGAAGACT...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGACAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLIFAVTFEVMRVLPLPTEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGT...CGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| 3UTR CAA 72 bp | ACCAGGAGGACTTGGGCTTTGCCTATGTACTCTGGTTaGTCTGTTTTGGGTAGAGGTGGTGACCTAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRTWALPMYSG*SVLGRGGDLVF Trigger: GAAGACTAGGTCACCACCTCTACCCAAAACAGACAAACCAGAGTACATAGGCAAAGCCCAAGTCCTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCGGACTCACTAGAGGATaGTCAGACAGCTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FKGQGIRQVGNSCFRGCFGLTRG*SDSWFT Trigger: GGTGAACCAGCTGTCTGAGCATCCTCTAGTGAGTCC...GAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCACCACAGTCTCTTTCTaGAGCCCAACATCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSLIFAVTFEVMRVLPTTVSF*SPTSPW Trigger: CCACGGGGATGTTGGGCTCCAGAAAGAGACTGTGGT...GGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAACACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAVFSSS*ISSKST Trigger: TGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGAC...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCATGTTTGGGGCTTTGTaGTCTTCAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAMFGAL*SSAPHG Trigger: TCCATGAGGAGCTGAAGACCACAAAGCCCCAAACAT...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCACTGTGGATCCCCAATaGGGACAGAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSLIFAVTFEVMRVLPTVDPQ*GQRWWA Trigger: TGCCCACCATCTCTGTCCCCATTGGGGATCCACAGT...GGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAACACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGTTCCGATTGGACTGTaGATCCCCAATGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRQVGNSCFRGCFWEPFLVPIGL*IPNGDR Trigger: TCTGTCCCCATTGGGGATCCACAGTCCAATCGGAAC...CAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGCTGGGGGTTCCGATTaGACTGTGGATCCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLYSRVKALDRLGTVALEAGGSD*TVDPQW Trigger: CCATTGGGGATCCACAGTCCAATCGGAACCCCCAGC...CTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLIFAVTFEVMRVLPLPSSGFG*ISLVKT Trigger: TGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGA...CGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CPHPRGRAGFYLVLLEARSSGFG*ISLVKT Trigger: TGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGA...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGCAGGAAAGATGGGGGTaGGGGGCGGTAGGTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLYSRVKALDRLGTVALEQERWG*GAVGVV Trigger: AACAACACCTACCGCCCCCCACCCCCATCTTTCCTG...CTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGACTGGGTGTTGGTTGTaGTGTTTGGGGCTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTVALEGVSGNPSWISLTGCWL*CLGLCG Trigger: ACCACAAAGCCCCAAACATCACAACCAACACCCAGT...CAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGAGGCTCCATTCTTTGTaGAACACCAACCTCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTVALEGVSGNPSWISLRLHSL*NTNLIG Trigger: CCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCT...CAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGATTTTGTGTAGGCTCCATTCTTTGTaGAACACCAACCTCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVSGNPSWISLLGVILCRLHSL*NTNLIG Trigger: CCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCT...ACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCTTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCATGTTTGGGGCTTTGTaGTCTTCAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVSLIFAVTFEVMRVLPLMFGAL*SSAPHG Trigger: TCCATGAGGAGCTGAAGACCACAAAGCCCCAAACAT...GAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAAGAAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGCAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDRLGTVALEGVSGNPSWQSGRH*VLVVMF Trigger: AAACATCACAACCAACACCCAGTGCCTACCGCTTTG...CCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAATCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGIRQVGNSCFRGCFWESEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...TTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGSSGFG*ISLVKT Trigger: TGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGA...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RVKALDRLGTVALEGVSGSSGFG*ISLVKT Trigger: TGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGA...CCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCTTCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NCPHPRGRAGFYLVLLEALLIGL*LDFLSE Trigger: TTCACTAAGGAAATCCAGCCAAAGCCCGATGAGAAG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATACAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQVGNSCFRGCFWEPFLDTEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGT...ATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGTVALEGVSGNPSWISLVFSSS*ISSKST Trigger: TGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGAC...CAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTCAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVFKGQGIRQVGNSCFRGSEVES*GFRLDC Trigger: ACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGA...CCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR CAA 72 bp | ACTTGGGCTTTGCCTATGTACTCTGGTTTGTCTGTTTaGGGTAGAGGTGGTGACCTAGTCTTCTTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TWALPMYSGLSV*GRGGDLVFFRD Trigger: ATCCCTGAAGAAGACTAGGTCACCACCTCTACCCAAAACAGACAAACCAGAGTACATAGGCAAAGCCCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCATCTGTTTGTAGAATTTaGCAAAGGAGCTCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KREGRILFSTVGGQGLESSVCRI*QRSSKI Trigger: GATTTTGGAGCTCCTTTGTCAAATTCTACAAACAGA...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGAGGCTCCATTCTTTGTaGAACACCAACCTCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLYSRVKALDRLGTVALERLHSL*NTNLIG Trigger: CCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCT...CTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAGGTGTTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SCFRGCFWEPFLDFSARCSSGFG*ISLVKT Trigger: TGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGA...ACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR CAA 72 bp | GAGAAACTGTATTCAAGGGTCAAGGCATTAGACAGGTaGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKLYSRVKALDR*GTVALEGVSGN Trigger: GTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCTCTGTTTGTAGAATTTaGCAAAGGAGCTCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ELPSSKREGRILFSTVGGSVCRI*QRSSKI Trigger: GATTTTGGAGCTCCTTTGTCAAATTCTACAAACAGA...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| 3UTR CAA 72 bp | GGGAACCCTTCTTGGATTTCTCTGCTAGGTGTGATTTaGTGTTTCTTTGATTTTCGCTGTCACCTTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNPSWISLLGVI*CFFDFRCHLRG Trigger: ACCTCGAAGGTGACAGCGAAAATCAAAGAAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| 3UTR CAA 72 bp | AACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTaGGATTTCTCTGCTAGGTGTGATTTTGTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSCFRGCFWEPF*DFSARCDFVFL Trigger: AAGAAACACAAAATCACACCTAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS CCA 90 bp | TCCTGCAGAATGGAGGCTTGGACTCCTCCATCTTTGCTAGAAGGGTaGACCCGCTGGCCCTGGCGGTTGCGACGGGTGAGGGCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRMEAWTPPSLLEG*TRWPWRLRRVRAWL Trigger: CAGCCAAGCCCTCACCCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTCTAGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS TCA 90 bp | GGTGAGGGCTTGGCTGGAAGCAGGGATAAGCCTACCGGTCTCAGCTaGGTATTTGGCCCCCTGCTCTCTCGGAGGAGGTTCCCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEGLAGSRDKPTGLS*VFGPLLSRRRFPQR Trigger: CCTCTGAGGGAACCTCCTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGGCTTATCCCTGCTTCCAGCCAAGCCCTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGAATCTGGAAATGTTTGCCAGGAGGTGGGGGAGTCGCTGTAGGCAGCCTGGCGACGGGTGAGGGCTaGGCTGGAAGCAGGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGIWKCLPGGGGVAVGSLATGEG*AGSRDK Trigger: CTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGC...CAGGCTGCCTACAGCGACTCCCCCACCTCCTGGCAAACATTTCCAGATTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS GCA 90 bp | AGAGAACTCGTCCCTGACCACGCAGACAGGCTTCCCAGCGATATCTaGAGAGGGAGTGAGATCCATGGGCTGGACCCCAGGAGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RELVPDHADRLPSDI*RGSEIHGLDPRSLK Trigger: CTTCAAGCTCCTGGGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGACGAGTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000131879.8 |
||
| CDS TCA 90 bp | GAGATGGTGGGCATCCCCATCAGACAGCGGGATAAGAATGTGGGCTaGGTCAAGGCCGACAGAGAGAACTCGTCCCTGACCACGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EMVGIPIRQRDKNVG*VKADRENSSLTTQT Trigger: TGTCTGCGTGGTCAGGGACGAGTTCTCTCTGTCGGCCTTGACTCAGCCCACATTCTTATCCCGCTGTCTGATGGGGATGCCCACCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000126831.2 ENSMUST00000131879.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGGCGACGGGTGAGGGCTaGGCTGGAAGCAGGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKREGRILFSTVGGQGLEATGEG*AGSRDK Trigger: CTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGC...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTAGTGAGGGGCTCCATCCAGTGAAGCAGCCGGGAACCTTGGTCCCTAGCCTGCAGAATGGAGGCTaGGACTCCTCCATCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MPSEGLHPVKQPGTLVPSLQNGG*DSSIFA Trigger: AGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAG...GCTAGGGACCAAGGTTCCCGGCTGCTTCACTGGATGGAGCCCCTCACTAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS TCA 90 bp | ATATCTGCAGAGGGAGTGAGATCCATGGGCTGGACCCCAGGAGCTTaGAGGAGCTTGGATATGAGTCACTCGCTGTGGTTGGGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISAEGVRSMGWTPGA*RSLDMSHSLWLGVV Trigger: CACCACCCCCAACCACAGCGAGTGACTCATATCCAAGCTCCTTCAAGCTCCTGGGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS CCA 90 bp | TGGATCAGCTCGAAATCCACAATGCCTGGGACCACAGTCTCTTTCTaGAGCCCAACATCCCCGTGGCTCCTTGGAAGGTTCTCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WISSKSTMPGTTVSF*SPTSPWLLGRFSGF Trigger: GAAGCCGGAGAACCTTCCAAGGAGCCACGGGGATGTTGGGCTCCAGAAAGAGACTGTGGTCCCAGGCATTGTGGATTTCGAGCTGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
||
| CDS CCA 90 bp | CGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRFPQRWLFLLIGL*LDFLSEDSHSGSQV Trigger: GACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | TTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LIFAVTFEVMRVLPLPCQSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...CTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGCGACGGGTGAGGGCTaGGCTGGAAGCAGGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPHPRGRAGFYLVLLEARATGEG*AGSRDK Trigger: CTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGC...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS GCA 90 bp | CCCTGCTCTCTCGGAGGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTaGTCATCGGGCTTTGGCTGGATTTCCTTAGTGAAGACAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PCSLGGGSLRGGSSF*SSGFGWISLVKTVT Trigger: AGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAGAGAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS CCA 90 bp | GGAGGTTCCCTCAGAGGTGGCTCTTCCTTCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGSLRGGSSFSSGFG*ISLVKTVTREARSF Trigger: GAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGAAGGAAGAGCCACCTCTGAGGGAACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS CCA 90 bp | TCAGTTTCTTCCTCCAGGTGTCTGAGAGGACAGGAAAGATGGGGGTaGGGGGCGGTAGGTGTTGTTTGTCCTCCCTGTGTCTTCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSRCLRGQERWG*GAVGVVCPPCVFRT Trigger: TGTCCTGAAGACACAGGGAGGACAAACAACACCTACCGCCCCCCACCCCCATCTTTCCTGTCCTCTCAGACACCTGGAGGAAGAAACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGRAGFYLVLLEARGWSQSHSLW*GVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACT...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HPRGRAGFYLVLLEARGWSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCAGAGGTGGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGATTTCCTTAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FPQRWLFLLLIGLWLDFLSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...AAGGAAATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGGTCTCAGCTGAGTATTaGGCCCCCTGCTCTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKREGRILFSTVGGQGLEVSAEY*APCSLG Trigger: TCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGAC...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCPHPRGRAGFYLVLLEASHSLW*GVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACT...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSKREGRILFSTVGGQGLSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...CAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KREGRILFSTVGGQGLESSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CCA 90 bp | TCGAGAAGAAGGAATGGTGGCTTAGGCGTCCAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTTGGGGCTTTGTGGTCTTCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRRNGGLGVQSGRH*VLVVMFGALWSSAP Trigger: AGGAGCTGAAGACCACAAAGCCCCAAACATCACAACCAACACCCAGTGCCTACCGCTTTGGACGCCTAAGCCACCATTCCTTCTTCTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTCAGTTTCTTCCTCAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISLVKTVTREARSFSFFLSHSLW*GVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACT...GAGGAAGAAACTGAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCGTCTCAGCTGAGTATTaGGCCCCCTGCTCTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELPSSKREGRILFSTVGGVSAEY*APCSLG Trigger: TCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGAC...GCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CAA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCGTCTCAGCTGAGTATTaGGCCCCCTGCTCTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NCPHPRGRAGFYLVLLEAVSAEY*APCSLG Trigger: TCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGAC...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CAA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGCTGCAGAATGGAGGCTaGGACTCCTCCATCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPRGRAGFYLVLLEARGWLQNGG*DSSIFA Trigger: AGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAG...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS-3UTR CAA 90 bp | GATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCAGCATCTAGGCTCCATTCTTaGTGCAACACCAACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DFRCHLRGYEGPSPPVPASRLHS*CNTNLI Trigger: GATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGA...TGCTGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS CCA 90 bp | CAAAGCGGTAGGCACTGGGTGTTGGTTGTGATGTTTGGGGCTTTGTaGTCTTCAGCTCCTCATGGATCAGCTCGAAATCCACAATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSGRHWVLVVMFGAL*SSAPHGSARNPQCL Trigger: CAGGCATTGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGACCACAAAGCCCCAAACATCACAACCAACACCCAGTGCCTACCGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS CCA 90 bp | CTAGGCTCCATTCTTTGTGCAACACCAACCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSILCATPTSSGFG*ISLVKTVTREARSF Trigger: GAAGGACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS-3UTR CAA 90 bp | GGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGGATTTCTCTGCTAAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GTVALEGVSGNPSWISLLSHSLW*GVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACT...TAGCAGAGAAATCCAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KGQGIRQVGNSCFRGCFWSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...CCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS-3UTR CAA 90 bp | GTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VKALDRLGTVALEGVSGNSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...GTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAACTGCAGAATGGAGGCTaGGACTCCTCCATCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRAGFYLVLLEARGWSQLQNGG*DSSIFA Trigger: AGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAG...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTGCCTCTTGTGTCTCTaGAGGCTCTTGAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKREGRILFSTVGGQGLECLLCL*RLLKLL Trigger: CAAGAGCTTCAAGAGCCTCAAGAGACACAAGAGGCA...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | CATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGCTTCCCAGCGATATCTaGGATATGAGTCACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPRGRAGFYLVLLEARGWLPSDI*DMSHSL Trigger: CAGCGAGTGACTCATATCCAAGATATCGCTGGGAAG...CCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122261.8 ENSMUST00000126831.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGTCAAAGGACTTTTCTGTGGCCTCCGGTCAAGTAGCGGCAGGGTATGCCTTCCCAGCGATATCTaGGATATGAGTCACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFVKGLFCGLRSSSGRVCLPSDI*DMSHSL Trigger: CAGCGAGTGACTCATATCCAAGATATCGCTGGGAAG...GCATACCCTGCCGCTACTTGACCGGAGGCCACAGAAAAGTCCTTTGACAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
||
| CDS CCA 90 bp | GGTGTTGGTTGTGATGTTTGGGGCTTTGTGGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACAATGCCTGGGACCACAGTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVGCDVWGFVVFSSS*ISSKSTMPGTTVSF Trigger: GAAAGAGACTGTGGTCCCAGGCATTGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGACCACAAAGCCCCAAACATCACAACCAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS-3UTR CAA 90 bp | ATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGAACCCTTCTTGAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: IRQVGNSCFRGCFWEPFLSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...CAAGAAGGGTTCCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCAATGCCTCTTGTGTCTCTaGAGGCTCTTGAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRAGFYLVLLEARGWSQCLLCL*RLLKLL Trigger: CAAGAGCTTCAAGAGCCTCAAGAGACACAAGAGGCA...TTGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCTGGTTTGTCTGTTTaGGGTAGAGGTGGTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: SKREGRILFSTVGGQGLESGLSV*GRGGDL Trigger: TAGGTCACCACCTCTACCCAAAACAGACAAACCAGA...CTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATTTTCGCTGTCACCTTCGAGGTTATGAGGGTCCTTCCCCTCCCGTGCCATCTAGGCTCCATTCTTaGTGCAACACCAACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FDFRCHLRGYEGPSPPVPSRLHS*CNTNLI Trigger: GATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGA...TGGCACGGGAGGGGAAGGACCCTCATAACCTCGAAGGTGACAGCGAAAATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS CCA 90 bp | TTTTCTAGGCTCCATTCTTTGTGCAACACCAACCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSRLHSLCNTNLIGL*LDFLSEDSHSGSQV Trigger: GACCTGGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGCTCTCTTCCTGTAACTaGGATATGAGTCACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPHPRGRAGFYLVLLEARLSSCN*DMSHSL Trigger: CAGCGAGTGACTCATATCCAAGTTACAGGAAGAGAG...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGTGTCTCTTGAGGCTCTaGAAGCTCTTGGAGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPHPRGRAGFYLVLLEARCLLRL*KLLEMV Trigger: AACCATCTCCAAGAGCTTCAAGAGCCTCAAGAGACA...CCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAGGGTGTTTCTGGGCTTCCCAGCGATATCTaGGATATGAGTCACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVKALDRLGTVALEGVSGLPSDI*DMSHSL Trigger: CAGCGAGTGACTCATATCCAAGATATCGCTGGGAAG...CCCAGAAACACCCTCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121297.8 |
||
| CDS-3UTR CAA 90 bp | GAAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGAAGCTGGGGGTTCCGATaGGACTGTGGATCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ETVFKGQGIRQVGNSCFRSWGFR*DCGSPM Trigger: CATTGGGGATCCACAGTCCAATCGGAACCCCCAGCT...TCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000121297.8 ENSMUST00000140456.2 ENSMUST00000143207.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS-3UTR CAA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCTCTGGTTTGTCTGTTTaGGGTAGAGGTGGTGACCTA | + |
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Preference number: 5 (lower is better) Translates to: NCPHPRGRAGFYLVLLEASGLSV*GRGGDL Trigger: TAGGTCACCACCTCTACCCAAAACAGACAAACCAGA...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCAGGGGCTGGAGTCACTAAATCTTTTTCTTTaGATGGAGCATAAAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KREGRILFSTVGGQGLESLNLFL*MEHKAA Trigger: GGCTGCTTTATGCTCCATCAAAAGAAAAAGATTTAG...TGACTCCAGCCCCTGGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS-3UTR CAA 90 bp | AACTGCCCTCATCCAAGAGGGAGGGCAGGATTTTATTTAGTACTGTTGGAGGCCCTAAATCTTTTTCTTTaGATGGAGCATAAAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: NCPHPRGRAGFYLVLLEALNLFL*MEHKAA Trigger: GGCTGCTTTATGCTCCATCAAAAGAAAAAGATTTAG...GGCCTCCAACAGTACTAAATAAAATCCTGCCCTCCCTCTTGGATGAGGGCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS-3UTR CAA 90 bp | GAAACTGTATTCAAGGGTCAAGGCATTAGACAGGTTGGGAACAGTTGCTTTAGATCTAGGCTCCATTCTTaGTGCAACACCAACCTCATC | + |
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Preference number: 5 (lower is better) Translates to: ETVFKGQGIRQVGNSCFRSRLHS*CNTNLI Trigger: GATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGA...TCTAAAGCAACTGTTCCCAACCTGTCTAATGCCTTGACCCTTGAATACAGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS CAA 72 bp | GACCCGCTGGCCCTGGCGGTTGCGACGGGTGAGGGCTaGGCTGGAAGCAGGGATAAGCCTACCGGTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: DPLALAVATGEG*AGSRDKPTGLS Trigger: GCTGAGACCGGTAGGCTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCCAGGGCCAGCGGGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CCA 72 bp | ATGGAGGCTTGGACTCCTCCATCTTTGCTAGAAGGGTaGACCCGCTGGCCCTGGCGGTTGCGACGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MEAWTPPSLLEG*TRWPWRLRRVR Trigger: CCTCACCCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTCTAGCAAAGATGGAGGAGTCCAAGCCTCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CAA 72 bp | TCTTTGCTAGAAGGGTGGACCCGCTGGCCCTGGCGGTaGCGACGGGTGAGGGCTTGGCTGGAAGCAGGGATA | + |
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Preference number: 6 (lower is better) Translates to: SLLEGWTRWPWR*RRVRAWLEAGI Trigger: TATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTCTAGCAAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CAA 90 bp | ACTCCTCCATCTTTGCTAGAAGGGTGGACCCGCTGGCCCTGGCGGTaGCGACGGGTGAGGGCTTGGCTGGAAGCAGGGATAAGCCTACCG | + |
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Preference number: 6 (lower is better) Translates to: TPPSLLEGWTRWPWR*RRVRAWLEAGISLP Trigger: CGGTAGGCTTATCCCTGCTTCCAGCCAAGCCCTCACCCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTCTAGCAAAGATGGAGGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CAA 90 bp | AGCAGCTCCTGGTCCTGCAGAATGGAGGCTTGGACTCCTCCATCTTaGCTAGAAGGGTGGACCCGCTGGCCCTGGCGGTTGCGACGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSWSCRMEAWTPPS*LEGWTRWPWRLRRV Trigger: CACCCGTCGCAACCGCCAGGGCCAGCGGGTCCACCCTTCTAGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAGGACCAGGAGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS GCA 72 bp | GTCCCTGACCACGCAGACAGGCTTCCCAGCGATATCTaGAGAGGGAGTGAGATCCATGGGCTGGACCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VPDHADRLPSDI*RGSEIHGLDPR Trigger: CCTGGGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000131879.8 |
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| CDS CCA 72 bp | GGCCCCCTGCTCTCTCGGAGGAGGTTCCCTCAGAGGTaGCTCTTCCTTCTGCTCATCGGGCTTTGGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: GPLLSRRRFPQR*LFLLLIGLWLD Trigger: ATCCAGCCAAAGCCCGATGAGCAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAGAGAGCAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS CCA 72 bp | GGCCCCCTGCTCTCTCGGAGGAGGTTCCCTCAGAGGTaGCTCTTCCTTCTCATCGGGCTTTGGCTGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPLLSRRRFPQR*LFLLIGLWLDF Trigger: GAAATCCAGCCAAAGCCCGATGAGAAGGAAGAGCCACCTCTGAGGGAACCTCCTCCGAGAGAGCAGGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126831.2 |
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| CDS CAA 90 bp | GCTTGGCTGGAAGCAGGGATAAGCCTACCGGTCTCAGCTGAGTATTaGGCCCCCTGCTCTCTCGGAGGAGGTTCCCTCAGAGGTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWLEAGISLPVSAEY*APCSLGGGSLRGGS Trigger: AGAGCCACCTCTGAGGGAACCTCCTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGGCTTATCCCTGCTTCCAGCCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS TCA 72 bp | CGCAGACAGGCTTCCCAGCGATATCTGCAGAGGGAGTaGGATCCATGGGCTGGACCCCAGGAGCTTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RRQASQRYLQRE*DPWAGPQELEG Trigger: TCCTTCAAGCTCCTGGGGTCCAGCCCATGGATCTCACTCCCTCTGCAGATATCGCTGGGAAGCCTGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000131879.8 |
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| CDS TCA 72 bp | TGGGCTGAGTCAAGGCCGACAGAGAGAACTCGTCCCTaGCCACGCAGACAGGCTTCCCAGCGATATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WAESRPTERTRP*PRRQASQRYLQ Trigger: CTGCAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGACGAGTTCTCTCTGTCGGCCTTGACTCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000131879.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
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| CDS CAA 90 bp | GGTGGTGAGGGGCAGGGAGTGCTCCAGGTCCTCTCTTCCTGTAACTaGGATATGAGTCACTCGCTGTGGTTGGGGGTGGTGCCTCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GGEGQGVLQVLSSCN*DMSHSLWLGVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGTTACAGGAAGAGAGGACCTGGAGCACTCCCTGCCCCTCACCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
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| CDS CAA 90 bp | AAGGAGCTCCAAAATCAGCAGCTCCTGGTCCTGCAGAATGGAGGCTaGGACTCCTCCATCTTTGCTAGAAGGGTGGACCCGCTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KELQNQQLLVLQNGG*DSSIFARRVDPLAL Trigger: CAGGGCCAGCGGGTCCACCCTTCTAGCAAAGATGGAGGAGTCCAAGCCTCCATTCTGCAGGACCAGGAGCTGCTGATTTTGGAGCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 |
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| CDS TCA 72 bp | GGCATCCCCATCAGACAGCGGGATAAGAATGTGGGCTaGGTCAAGGCCGACAGAGAGAACTCGTCCCTGACC | + |
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Preference number: 6 (lower is better) Translates to: GIPIRQRDKNVG*VKADRENSSLT Trigger: GGTCAGGGACGAGTTCTCTCTGTCGGCCTTGACTCAGCCCACATTCTTATCCCGCTGTCTGATGGGGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000126831.2 ENSMUST00000131879.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
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| CDS TCA 72 bp | TTGGCTGGAAGCAGGGATAAGCCTACCGGTCTCAGCTaGGTATTTGGCCCCCTGCTCTCTCGGAGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LAGSRDKPTGLS*VFGPLLSRRRF Trigger: GAACCTCCTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGGCTTATCCCTGCTTCCAGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS TCA 72 bp | TGGGCTGAGTCAAGGCCGACAGAGAGAACTCGTCCCTaGCCACGCAGACAGGCTTCCCAGCGATATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: WAESRPTERTRP*PRRQASQRYLG Trigger: TCCAAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGACGAGTTCTCTCTGTCGGCCTTGACTCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CCA 72 bp | TGGCTCCTTGGAAGGTTCTCCGGCTTCGTCTCTGGCTaGGGCTCTGCCTTTGGACTCACTAGAGGATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: WLLGRFSGFVSG*GSAFGLTRGCS Trigger: TGAGCATCCTCTAGTGAGTCCAAAGGCAGAGCCCCAGCCAGAGACGAAGCCGGAGAACCTTCCAAGGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS CCA 72 bp | TGGTGGGCATCCCCATCAGACAGCGGGATAAGAATGTaGGCTGAGTCAAGGCCGACAGAGAGAACTCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: WWASPSDSGIRM*AESRPTERTRP Trigger: GGGACGAGTTCTCTCTGTCGGCCTTGACTCAGCCCACATTCTTATCCCGCTGTCTGATGGGGATGCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000126831.2 ENSMUST00000131879.8 ENSMUST00000140456.2 ENSMUST00000148181.8 |
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| CDS CAA 72 bp | GGGCAGGGAGTGCTCCAGGTCCTCTCTTCCTGTAACTaGGATATGAGTCACTCGCTGTGGTTGGGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GQGVLQVLSSCN*DMSHSLWLGVV Trigger: CACCACCCCCAACCACAGCGAGTGACTCATATCCAAGTTACAGGAAGAGAGGACCTGGAGCACTCCCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
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| CDS CAA 72 bp | GAAGCAGGGATAAGCCTACCGGTCTCAGCTGAGTATTaGGCCCCCTGCTCTCTCGGAGGAGGTTCCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EAGISLPVSAEY*APCSLGGGSLR Trigger: TCTGAGGGAACCTCCTCCGAGAGAGCAGGGGGCCAAATACTCAGCTGAGACCGGTAGGCTTATCCCTGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035894.12 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CAA 72 bp | GTCCCTGACCACGCAGACAGGCTTCCCAGCGATATCTaGGATATGAGTCACTCGCTGTGGTTGGGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VPDHADRLPSDI*DMSHSLWLGVV Trigger: CACCACCCCCAACCACAGCGAGTGACTCATATCCAAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000126831.2 |
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| CDS CAA 90 bp | AGAGAACTCGTCCCTGACCACGCAGACAGGCTTCCCAGCGATATCTaGGATATGAGTCACTCGCTGTGGTTGGGGGTGGTGCCTCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: RELVPDHADRLPSDI*DMSHSLWLGVVPRE Trigger: TTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGATATCGCTGGGAAGCCTGTCTGCGTGGTCAGGGACGAGTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121297.8 ENSMUST00000122261.8 |
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| CDS TCA 72 bp | GAGTGCTCCAGGTCCTCTCTTCCTGTAACTTGGATATaGGTCACTCGCTGTGGTTGGGGGTGGTGCCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ECSRSSLPVTWI*VTRCGWGWCLE Trigger: CTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGTTACAGGAAGAGAGGACCTGGAGCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
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| CDS TCA 72 bp | GAGGGAGTGAGATCCATGGGCTGGACCCCAGGAGCTTaGAGGAGCTTGGATATGAGTCACTCGCTGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: EGVRSMGWTPGA*RSLDMSHSLWL Trigger: CAACCACAGCGAGTGACTCATATCCAAGCTCCTTCAAGCTCCTGGGGTCCAGCCCATGGATCTCACTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
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| CDS CCA 72 bp | TGTCCTCCCTGTGTCTTCAGGACAGAAGTAGAAAGCTaGGGGTTCCGATTGGACTGTGGATCCCCAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: CPPCVFRTEVES*GFRLDCGSPMG Trigger: CCCCATTGGGGATCCACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTGTCCTGAAGACACAGGGAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140456.2 ENSMUST00000143207.8 |
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| CDS CAA 72 bp | CCCAGCGATATCTTGGATATGAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAAGAAGGAATGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PSDILDMSHSLW*GVVPREEGMVA Trigger: AGCCACCATTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGATATCGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121297.8 ENSMUST00000122261.8 |
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| CDS CAA 72 bp | AGAGGGAGTGAGATCCATGGGCTGGACCCCAGGAGCTaGAAGGAGCTTGGATATGAGTCACTCGCTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RGSEIHGLDPRS*KELGYESLAVV Trigger: AACCACAGCGAGTGACTCATATCCAAGCTCCTTCAAGCTCCTGGGGTCCAGCCCATGGATCTCACTCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131879.8 |
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| CDS CCA 72 bp | AGGAATGGTGGCTTAGGCGTCCAAAGCGGTAGGCACTaGGTGTTGGTTGTGATGTTTGGGGCTTTGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RNGGLGVQSGRH*VLVVMFGALWS Trigger: AGACCACAAAGCCCCAAACATCACAACCAACACCCAGTGCCTACCGCTTTGGACGCCTAAGCCACCATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS CCA 72 bp | CTTCCCAGCGATATCTTGGATATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGAGAAGAAGGAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPSDILDMSHSL*LGVVPREEGMV Trigger: CACCATTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGATATCGCTGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121297.8 ENSMUST00000122261.8 |
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| CDS CCA 72 bp | CTCTCTTCCTGTAACTTGGATATGAGTCACTCGCTGTaGTTGGGGGTGGTGCCTCGAGAAGAAGGAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSCNLDMSHSL*LGVVPREEGMV Trigger: CACCATTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGTTACAGGAAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
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| CDS CAA 72 bp | TCTTCCTGTAACTTGGATATGAGTCACTCGCTGTGGTaGGGGGTGGTGCCTCGAGAAGAAGGAATGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSCNLDMSHSLW*GVVPREEGMVA Trigger: AGCCACCATTCCTTCTTCTCGAGGCACCACCCCCAACCACAGCGAGTGACTCATATCCAAGTTACAGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035894.12 |
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| CDS CAA 90 bp | GTCCAAAGCGGTAGGCACTGGGTGTTGGTTGTGATGTTTGGGGCTTaGTGGTCTTCAGCTCCTCATGGATCAGCTCGAAATCCACAATGC | + |
|
Preference number: 6 (lower is better) Translates to: VQSGRHWVLVVMFGA*WSSAPHGSARNPQC Trigger: GCATTGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGACCACAAAGCCCCAAACATCACAACCAACACCCAGTGCCTACCGCTTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS GCA 72 bp | TCTTCAGCTCCTCATGGATCAGCTCGAAATCCACAATaGCTGGGACCACAGTCTCTTTCTGGAGCCCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPHGSARNPQ*LGPQSLSGAQH Trigger: ATGTTGGGCTCCAGAAAGAGACTGTGGTCCCAGGCATTGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS CCA 72 bp | TGTGATGTTTGGGGCTTTGTGGTCTTCAGCTCCTCATaGATCAGCTCGAAATCCACAATGCCTGGGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: CDVWGFVVFSSS*ISSKSTMPGTT Trigger: TGTGGTCCCAGGCATTGTGGATTTCGAGCTGATCCATGAGGAGCTGAAGACCACAAAGCCCCAAACATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035894.12 ENSMUST00000121297.8 ENSMUST00000122261.8 ENSMUST00000131879.8 |
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| CDS CCA 72 bp | ATTCTTTGTGCAACACCAACCTCATCGGGCTTTGGCTaGATTTCCTTAGTGAAGACAGTCACTCGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILCATPTSSGFG*ISLVKTVTREA Trigger: GGCTTCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGGTTGGTGTTGCACAAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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| CDS CCA 72 bp | CTCCATTCTTTGTGCAACACCAACCTCATCGGGCTTTaGCTGGATTTCCTTAGTGAAGACAGTCACTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LHSLCNTNLIGL*LDFLSEDSHSG Trigger: TCCCGAGTGACTGTCTTCACTAAGGAAATCCAGCCAAAGCCCGATGAGGTTGGTGTTGCACAAAGAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121297.8 ENSMUST00000148181.8 ENSMUST00000151886.8 |
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