Pregenerated sensors for TAX1BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004535Ensembl transcript IDs: ENSMUST00000080723.11, ENSMUST00000138040.8, ENSMUST00000149588.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCATCTCCTTAGCCTCTaGGATGTGGTTTGTTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: DRDANPEALFLQQTRLTEHLLSL*DVVCFV Trigger: TACAAAACAAACCACATCTCAGAGGCTAAGGAGATG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCGAGGATAGACAGAGATaGAAACCCAGAAGCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KPAFPYKKGFFTPLISFFEDRQR*KPRSTL Trigger: AAGAGTGCTTCTGGGTTTGCATCTCTGTCTATCCTC...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTAATCATCAGGAAAGTGTaGAGGAGGAACCTGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LHTTYLILLAAPHLSTILIIRKV*RRNLKV Trigger: CACTTTCAGGTTCCTCCTCCACACTTTCCTGATGAT...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| 3UTR CCA 72 bp | CACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTaGAGGAGGAACCTGAAAGTGACACCTGGCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HTLKKFSIIRKV*RRNLKVTPGIS Trigger: GGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCCCTTCTGCTCAGCCTaGAATTGCTCACACCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHPFCSA*NCSHRP Trigger: AGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGG...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATGCGGGAACTGCTCGCTaGACATTGGACACACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHAGTAR*TLDTPS Trigger: GGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGC...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTAGCCTCGAAGCAGCTCGGAACTaGAAAGGAGTACTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QESVEEEPESDTWHLLSLEAARN*KGVLAP Trigger: TGGAGCAAGTACTCCTTTCCAGTTCCGAGCTGCTTC...GAGGCTAAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGTGACAGCACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTGGAGTCAAGAAGGCCCTTCTaGTCAGCCTGCAATTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVTAHAKEVLHHQESVESRRPF*SACNCS Trigger: TGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGA...CTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTGCTGTCACTAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGGCCTGTCTCTGCACATaGCGCTGCTGGCTTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTEACLCT*RCWLYI Trigger: GATGTAAAGCCAGCAGCGTCATGTGCAGAGACAGGC...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGACAGCACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTGGAGGGACACACCTTCCAGTaGCTTTCAACGTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVTAHAKEVLHHQESVEGHTFQ*LSTCSS Trigger: TGAAGAACACGTTGAAAGTCACTGGAAGGTGTGTCC...CTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTGCTGTCACTAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATAGGTTTCGAGCAGGCTaGCTACAGACAACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHRFRAG*LQTTLS Trigger: AGACAATGTTGTCTGTAGCCAGCCTGCTCGAAACCT...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCACCTTGAGACTTGTTaGGGGCTCTGGCCTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTEHLETC*GLWPSN Trigger: ATTGGAAGGCCAGAGCCCTCAACAAGTCTCAAGGTG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTAACTGGCTGTGCACTTaGCAGTGGAGGAAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGFLHTTYLILLAAPHLSNWLCT*QWRKEP Trigger: GGGCTCCTTCCTCCACTGTCAAGTGCACAGCCAGTT...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | CATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTTCAGCCAAGCAGGACTaGAGTTTGCTAATCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHQESVEEEPESDTWHLLSAKQD*SLLISS Trigger: AGAAGAGATTAGCAAACTGCAGTCCTGCTTGGCTGA...AAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTAGCCTCTCTAAGCGTGCAGTATaGAGATCTGCCATAGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QESVEEEPESDTWHLLSLSKRAV*RSAIVL Trigger: TAAAACTATGGCAGATCTGCATACTGCACGCTTAGA...GAGGCTAAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATAGTGTGTCGGCTAGCTaGTTCTTCACTCTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHSVSAS*FFTLSF Trigger: AAATGAGAGAGTGAAGAAGCAGCTAGCCGACACACT...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATTTCTCTGTAATGATCTaGAGCCATCTGAAGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHFSVMI*SHLKTE Trigger: CTCCGTCTTCAGATGGCTGCAGATCATTACAGAGAA...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGATTGTCTTCCCAAGATaGGACTCGCACAGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTEIVFPR*DSHRWP Trigger: AGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAAT...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTAGCCTCCTTTTAGCCACATTTTaGAAGATGACATGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QESVEEEPESDTWHLLSLLLATF*KMTWAK Trigger: TTTTGCCCATGTCATCTTTCAAAATGTGGCTAAAAG...GAGGCTAAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCACTCTCAAACTTTGTaGTACTTCAAGAAGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHHSQTL*YFKKAL Trigger: AAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGTG...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | CATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTCGGGTCTGTATTTATTaGAGCATCGTTCACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HHQESVEEEPESDTWHLLRVCIY*SIVHFL Trigger: CAGAAAGTGAACGATGCTTCAATAAATACAGACCCG...AAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATTCTTTGGAGTGTGGATaGATATACGGAGTTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHSLECG*IYGVKV Trigger: CACCTTAACTCCGTATATCCATCCACACTCCAAAGA...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GATAGACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACCACCGCCCTTTCTCCTaGCTCAGTTCTCTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DRQRCKPRSTLLTADKINHRPFS*LSSLSI Trigger: AATGGAGAGAGAACTGAGCCAGGAGAAAGGGCGGTG...GTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GATAGACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACCTGCTCGCTGCACATTaGACACACCTTCCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DRQRCKPRSTLLTADKINLLAAH*THLPVT Trigger: AGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAG...GTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGACAGCACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTGGAGTACTCCATCCAACCTTaGATATACCAACCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVTAHAKEVLHHQESVEYSIQP*IYQPNL Trigger: AAGATTGGGTTGGTATATTCAAGGTTGGATGGAGTA...CTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTGCTGTCACTAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGTGACAGCACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTGGAGATGCTAGTACACAATTaGCTGTTGATCCTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVTAHAKEVLHHQESVEMLVHN*LLILPH Trigger: ATGTGGAAGGATCAACAGTCAATTGTGTACTAGCAT...CTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTGCTGTCACTAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTGAGCAGCTCTTCAACTaGAGAAGCAGCTCGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGFLHTTYLILLAAPHLSEQLFN*RSSSEL Trigger: CAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTGCTC...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCTGGATCAGGAGGAATaGGCACATTTTCGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTELDQEE*AHFRLL Trigger: GAGAAGACGAAAATGTGCCCATTCCTCCTGATCCAG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATGTATCAGTCTTTTCCTaGTCTTTCTTTACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHVSVFS*SFFTAC Trigger: ACATGCTGTAAAGAAAGATCAGGAAAAGACTGATAC...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATGTCATTTCACAGACATaGTCCTTTGTTGACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHHQESVEEEPESDTWHVISQT*SFVDIS Trigger: TGATATGTCAACAAAGGATCATGTCTGTGAAATGAC...ATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATGGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCAGCTGCTCTCTCTCATaGTGTGCCTTCCTGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPAFPYKKGFFTPLISFFSCSLS*CAFLSL Trigger: TAAGCTCAGGAAGGCACAGCATGAGAGAGAGCAGCT...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCTTGTTCCTCCGCTTTaGGAAGTTGCTCCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTELVPPL*EVAPLK Trigger: TTTTAAAGGAGCAACTTCGCAAAGCGGAGGAACAAG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCGAAGGCCAGCTTTTGTaGTTACCACCAACATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPAFPYKKGFFTPLISFFEGQLL*LPPTYR Trigger: CCGATATGTTGGTGGTAACCACAAAAGCTGGCCTTC...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTTTTTCTGTCTGCAGCTaGCATTCAAGCTGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFFSVCS*HSSCSL Trigger: GAGAGAGCAGCTTGAATGTCAGCTGCAGACAGAAAA...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | GATAGACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGGGGACATTTCTTGTaGACATCAAAGCTGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: DRQRCKPRSTLLTADKINRGHFL*TSKLES Trigger: TGATTCCAGCTTTGATGTTCACAAGAAATGTCCCCT...GTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTAGTGCTGAGTAAGGGTTaGCATACTGAAGAACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTTYLILLAAPHLSTILVLSKG*HTEELA Trigger: AGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCAC...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGTTGTTTATTTGCTTTTaGAGCCTCTGGCACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTELFICF*SLWHSL Trigger: TAAGGAGTGCCAGAGGCTCCAAAAGCAAATAAACAA...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCCTTTGGATTTCATCTaGATAAAAAGCACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRDANPEALFLQQTRLTEPLDFI*IKSTIC Trigger: GCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCTCCTCTTCAAGCTGTTaGACTTTAGCTGTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPAFPYKKGFFTPLISFFSSSSC*TLAVAS Trigger: TGATGCTACAGCTAAAGTTCAACAGCTTGAAGAGGA...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTCTGGAAAGGAGTACTTaGTCCACGAATTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFLERST*STNFTL Trigger: AAGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAG...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTATCTCGCACATTCACTaGATCACTGAGCTCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGFLHTTYLILLAAPHLSISHIH*ITELFS Trigger: ACTAAAGAGCTCAGTGATGCAGTGAATGTGCGAGAT...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCTGCTTTTGGAGCCTCTaGCACTCCTTAAACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPAFPYKKGFFTPLISFFCFWSL*HSLNFS Trigger: AGAAAAGTTTAAGGAGTGCCAGAGGCTCCAAAAGCA...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTAACTCGCTGCCTGGTCTaGAAGTTTGTTTATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTTYLILLAAPHLSTILTRCLV*KFVYLL Trigger: AAGCAAATAAACAAACTTTCAGACCAGGCAGCGAGT...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTATGGCACTCCAAGTGTaGATTAGGAAGGTAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGFLHTTYLILLAAPHLSMALQV*IRKVTF Trigger: AAAAGTTACCTTCCTAATGCACACTTGGAGTGCCAT...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTTACCAACCCAATCTTTaGAGTGTGGATGGATATACG | + |
|
Preference number: 4 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFYQPNL*SVDGYT Trigger: CGTATATCCATCCACACTCCAAAGATTGGGTTGGTA...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR TCA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTATTTCACCCTTATGGGTaGCGTAACAGAACTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTTYLILLAAPHLSTILFHPYG*RNRTDK Trigger: TTTATCAGTTCTGTTACGTCACCCATAAGGGTGAAA...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR GCA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTATAAAAAGCACCATCTaGTCCATCTCTTGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFIKSTI*SISCFL Trigger: CAGGAAACAAGAGATGGAGCAGATGGTGCTTTTTAT...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CCA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTATGTGAACATCAAAGCTaGAATCAAAGCAAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTTYLILLAAPHLSTILCEHQS*NQSKSL Trigger: CAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACA...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | TCGGGGTCCTCTAAACCATCCGGCCGGCTAAGGTTTCGAGCAGGCTaGCTACAGACAACATTGTCTTCCCAAGATGGGACTCGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSSKPSGRLRFRAG*LQTTLSSQDGTRTG Trigger: ACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAGCCTGCTCGAAACCTTAGCCGGCCGGATGGTTTAGAGGACCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | GCCTTTCAAACCCCTGCTGGTCGTAGTCCGGCGGGAACTGCTCGCTaGACATTGGACACACCTTCCAGTGACTTTCAACGTGTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFQTPAGRSPAGTAR*TLDTPSSDFQRVLQ Trigger: TTGAAGAACACGTTGAAAGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGCCGGACTACGACCAGCAGGGGTTTGAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | AAACCCCTGCTGGTCGTAGTCCGGCGGGAACTGCTCGCTGCACATTaGACACACCTTCCAGTGACTTTCAACGTGTTCTTCAAATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPLLVVVRRELLAAH*THLPVTFNVFFKFG Trigger: ACCAAATTTGAAGAACACGTTGAAAGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGCCGGACTACGACCAGCAGGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | ACTCTCAAACTTTGTGATACTTCAAGAAGGCCCTTCTGCTCAGCCTaGAATTGCTCACACCGCCCTTTCTCCTGGCTCAGTTCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKLCDTSRRPFCSA*NCSHRPFSWLSSLS Trigger: GGAGAGAGAACTGAGCCAGGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | CTGCTCCATGACTACGTAAGTGCTGGTTTGCTGGATCAGGAGGAATaGGCACATTTTCGTCTTCTCTGCTGTCTTCGGGGTCCTCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLHDYVSAGLLDQEE*AHFRLLCCLRGPLN Trigger: GTTTAGAGGACCCCGAAGACAGCAGAGAAGACGAAAATGTGCCCATTCCTCCTGATCCAGCAAACCAGCACTTACGTAGTCATGGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | TCGTTTTCCACTCTCAAACTTTGTGATACTTCAAGAAGGCCCTTCTaGTCAGCCTGCAATTGCTCACACCGCCCTTTCTCCTGGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFSTLKLCDTSRRPF*SACNCSHRPFSWLS Trigger: ACTGAGCCAGGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGTGGAAAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | AAGCACCATCTGCTCCATCTCTTGTTTCCTGTGCTGAGTAAGGGTTaGCATACTGAAGAACTGGCTGTGCACTTGACAGTGGAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KHHLLHLLFPVLSKG*HTEELAVHLTVEEG Trigger: TCCTTCCTCCACTGTCAAGTGCACAGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCACAGGAAACAAGAGATGGAGCAGATGGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | TCTTCCATAGTGAGCAGCTCTTCAACTGGAGAAGCAGCTCGGAACTaGAAAGGAGTACTTGCTCCACGAATTTCACCCTTATGGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: SSIVSSSSTGEAARN*KGVLAPRISPLWVT Trigger: CGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTGCTCACTATGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTAGCCTCACTTGTTCCTCCGCTTaGCGAAGTTGCTCCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QESVEEEPESDTWHLLSLTCSSA*RSCSFK Trigger: TTTAAAGGAGCAACTTCGCAAAGCGGAGGAACAAGT...GAGGCTAAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | CTGGCTACAGACAACATTGTCTTCCCAAGATGGGACTCGCACAGGTaGCCTTTGGATTTCATCTGGATAAAAAGCACCATCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LATDNIVFPRWDSHR*PLDFIWIKSTICSI Trigger: GATGGAGCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTAGCCTCATACCAACCCAATCTTaGGAGTGTGGATGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: QESVEEEPESDTWHLLSLIPTQS*ECGWIY Trigger: GTATATCCATCCACACTCCAAAGATTGGGTTGGTAT...GAGGCTAAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | TGGAGGAAGGAGCCCATTTTGCTCAGAACATGTGTTGAGACACCTTaGGACTTGTTGAGGGCTCTGGCCTTCCAATTTCCTTCCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRKEPILLRTCVETP*DLLRALAFQFPSFL Trigger: CAAAAAGGAAGGAAATTGGAAGGCCAGAGCCCTCAACAAGTCTCAAGGTGTCTCAACACATGTTCTGAGCAAAATGGGCTCCTTCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | CAGCTCTTCAACTGGAGAAGCAGCTCGGAACTGGAAAGGAGTACTTaGTCCACGAATTTCACCCTTATGGGTGACGTAACAGAACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: QLFNWRSSSELERST*STNFTLMGDVTELI Trigger: TATCAGTTCTGTTACGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS GCA 90 bp | ACATTCACTGCATCACTGAGCTCTTTAGTCAGAAAGATAAGTTCTTaGCGTGTTGCCTGGACTTGTTCCTCCGCTTTGCGAAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFTASLSSLVRKISS*RVAWTCSSALRSCS Trigger: GGAGCAACTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGGCAAGAACTTATCTTTCTGACTAAAGAGCTCAGTGATGCAGTGAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 90 bp | TTCTTTACAGCATGTAGCTGCAGCTCTGCCAGTGTGTCGGCTAGCTaGTTCTTCACTCTCTCATTTTCTAAGCGTGCAGTATGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: FFTACSCSSASVSAS*FFTLSFSKRAVCRS Trigger: AGATCTGCATACTGCACGCTTAGAAAATGAGAGAGTGAAGAAGCAGCTAGCCGACACACTGGCAGAGCTGCAGCTACATGCTGTAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | CATATCGGAATTGCCTTCATCTTCCATAGTGAGCAGCTCTTCAACTaGAGAAGCAGCTCGGAACTGGAAAGGAGTACTTGCTCCACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HIGIAFIFHSEQLFN*RSSSELERSTCSTN Trigger: ATTCGTGGAGCAAGTACTCCTTTCCAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTGCTCACTATGGAAGATGAAGGCAATTCCGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS-3UTR CAA 90 bp | CATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTCAAGAAGGCCAGCTTTaGTGGTTACCACCAACATAT | + |
|
Preference number: 5 (lower is better) Translates to: HHQESVEEEPESDTWHLLQEGQL*WLPPTY Trigger: ATATGTTGGTGGTAACCACAAAAGCTGGCCTTCTTG...AAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | GCCCTAGTGACAGCACACGCTAAAGAAGTTCTCCATCATCAGGAAAGTGTGGAGGTCCTCTTCAAGCTGTaGAACTTTAGCTGTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ALVTAHAKEVLHHQESVEVLFKL*NFSCSI Trigger: GATGCTACAGCTAAAGTTCAACAGCTTGAAGAGGAC...CTCCACACTTTCCTGATGATGGAGAACTTCTTTAGCGTGTGCTGTCACTAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCCCGTGTTGCCTGGACTaGTTCCTCCGCTTTGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPAFPYKKGFFTPLISFFPCCLD*FLRFAK Trigger: CTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGG...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | CATCATCAGGAAAGTGTGGAGGAGGAACCTGAAAGTGACACCTGGCATCTCCTTGTACTCCATCCAACCTaGAATATACCAACCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: HHQESVEEEPESDTWHLLVLHPT*NIPTQS Trigger: AGATTGGGTTGGTATATTCAAGGTTGGATGGAGTAC...AAGGAGATGCCAGGTGTCACTTTCAGGTTCCTCCTCCACACTTTCCTGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTAGAACTGGCTGTGCACTaGACAGTGGAGGAAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTTYLILLAAPHLSTILELAVH*TVEEGA Trigger: GGCTCCTTCCTCCACTGTCAAGTGCACAGCCAGTTC...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | TCTGCAGCTGACATTCAAGCTGCTCTCTCTCATGCTGTGCCTTCCTaGGCTTATCCTTCAAACTGTCTAGGTCAGTTTCTTTTTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SAADIQAALSHAVPS*AYPSNCLGQFLFQW Trigger: CCATTGAAAAAGAAACTGACCTAGACAGTTTGAAGGATAAGCTCAGGAAGGCACAGCATGAGAGAGAGCAGCTTGAATGTCAGCTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | AAATGTACCTTATACAGCTCCTTCTCATCCTTTTCTGTCTGCAGCTaGCATTCAAGCTGCTCTCTCTCATGCTGTGCCTTCCTGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KCTLYSSFSSFSVCS*HSSCSLSCCAFLSL Trigger: TAAGCTCAGGAAGGCACAGCATGAGAGAGAGCAGCTTGAATGTCAGCTGCAGACAGAAAAGGATGAGAAGGAGCTGTATAAGGTACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | TCAACTTCTCTTCTCAGTTCATGTTCCAGGGTATCAGTCTTTTCCTaGTCTTTCTTTACAGCATGTAGCTGCAGCTCTGCCAGTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: STSLLSSCSRVSVFS*SFFTACSCSSASVS Trigger: CGACACACTGGCAGAGCTGCAGCTACATGCTGTAAAGAAAGATCAGGAAAAGACTGATACCCTGGAACATGAACTGAGAAGAGAAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | GATAGACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACCATCTGCTCCATCTCTaGTTTCCTGTGCTGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRQRCKPRSTLLTADKINHLLHL*FPVLSK Trigger: CTTACTCAGCACAGGAAACAAGAGATGGAGCAGATG...GTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTCTCCATTCTTCCAACTaGTTCTCTCAGCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGFLHTTYLILLAAPHLSLHSSN*FSQLCC Trigger: ACAGCACAGCTGAGAGAACAAGTTGGAAGAATGGAG...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGCCGGGTCTGTATTTATaGAAGCATCGTTCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DRDANPEALFLQQTRLTEPGLYL*KHRSLS Trigger: AGAAAGTGAACGATGCTTCAATAAATACAGACCCGG...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | GATAGACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACCACTTCAGCTCCATTTaGGCAAGTTCTTCAGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DRQRCKPRSTLLTADKINHFSSI*ASSSAY Trigger: ATACGCTGAAGAACTTGCCAAAATGGAGCTGAAGTG...GTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | GGAACTGGAAAGGAGTACTTGCTCCACGAATTTCACCCTTATGGGTaGCGTAACAGAACTGATAAAATTCTCCATCATCATTTGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGKEYLLHEFHPYG*RNRTDKILHHHLEG Trigger: ACCTTCCAAATGATGATGGAGAATTTTATCAGTTCTGTTACGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS TCA 90 bp | ACTGTATCTCTTCATAAACTCTTCGTTTTCCACTCTCAAACTTTGTaGTACTTCAAGAAGGCCCTTCTGCTCAGCCTGCAATTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVSLHKLFVFHSQTL*YFKKALLLSLQLLT Trigger: TGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGTGGAAAACGAAGAGTTTATGAAGAGATACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 90 bp | TCACTGAGCTCTTTAGTCAGAAAGATAAGTTCTTGCCGTGTTGCCTaGACTTGTTCCTCCGCTTTGCGAAGTTGCTCCTTTAAAAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSLVRKISSCRVA*TCSSALRSCSFKNN Trigger: ATTATTTTTAAAGGAGCAACTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGGCAAGAACTTATCTTTCTGACTAAAGAGCTCAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | GACAGAGATGCAAACCCAGAAGCACTCTTCTTACAGCAGACAAGATTAACAGAGAATGCTAGTACACAATaGACTGTTGATCCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DRDANPEALFLQQTRLTENASTQ*TVDPST Trigger: TGTGGAAGGATCAACAGTCAATTGTGTACTAGCATT...CTCTGTTAATCTTGTCTGCTGTAAGAAGAGTGCTTCTGGGTTTGCATCTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTACTGGAAAGGAGTACTaGCTCCACGAATTTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFTGKEY*LHEFHP Trigger: AGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAGT...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTTCGCACAGGTGGCCTTaGGATTTCATCTGGATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGFLHTTYLILLAAPHLSSHRWP*DFIWIK Trigger: TTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGA...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTATGACATGGGCAAAATaGGAAGTCTGCAATTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: KGFLHTTYLILLAAPHLSMTWAK*EVCNWT Trigger: AGTCCAATTGCAGACTTCCAATTTTGCCCATGTCAT...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACCAACATATCGGAATaGCCTTCATCTTCCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGFLHTTYLILLAAPHLSTNISE*PSSSIV Trigger: CACTATGGAAGATGAAGGCAATTCCGATATGTTGGT...ACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGAAACCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCTTTGTTTATTTGCTTTaGGAGCCTCTGGCACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPAFPYKKGFFTPLISFFFVYLL*EPLALL Trigger: AAGGAGTGCCAGAGGCTCCAAAAGCAAATAAACAAA...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCGTTCCCATATAAAAAGGGTTTCTTCACACCACTTATCTCATTCTTCAAGCAGGACTGCAGTTaGCTAATCTCTTCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KPAFPYKKGFFTPLISFFKQDCS*LISSLK Trigger: TTTCAAAGAAGAGATTAGCAAACTGCAGTCCTGCTT...GAAGAATGAGATAAGTGGTGTGAAGAAACCCTTTTTATATGGGAACGCTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTGCCTGGTCTGAAAGTTaGTTTATTTGCTTTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFAWSES*FICFWS Trigger: GCTCCAAAAGCAAATAAACAAACTTTCAGACCAGGC...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | TCAATGGCTTTATGTGTCACTGATACAATGTCCTCTTCAAGCTGTTaGACTTTAGCTGTAGCATCACTGTATCTCTTCATAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SMALCVTDTMSSSSC*TLAVASLYLFINSS Trigger: CGAAGAGTTTATGAAGAGATACAGTGATGCTACAGCTAAAGTTCAACAGCTTGAAGAGGACATTGTATCAGTGACACATAAAGCCATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTATTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFIGSLQ*DFLKGC Trigger: ACATCCTTTCAAGAAGTCCAATTGCAGACTTCCAAT...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | CTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTAACTTTTAGCCACATTTaGAAAGATGACATGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHTTYLILLAAPHLSTILTFSHI*KDDMGK Trigger: TTTGCCCATGTCATCTTTCAAAATGTGGCTAAAAGT...TAAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS-3UTR CAA 90 bp | TCTTCACACCACTTATCTCATTCTTCTTGCAGCTCCACATCTAAGTACGATTTTTCTTCAGCGTATTTATaGCACTTAGTTTTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHHLSHSSCSSTSKYDFSSAYL*HLVFSS Trigger: GGATGAGAAAACTAAGTGCAATAAATACGCTGAAGA...AAAATCGTACTTAGATGTGGAGCTGCAAGAAGAATGAGATAAGTGGTGTGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 90 bp | TACTTTTCTATTTTCTCAGCAATTTCTTTAGTCATTTCACAGACATaGTCCTTTGTTGACATATCAAAGCCTGTCTCTGCACATGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: YFSIFSAISLVISQT*SFVDISKPVSAHDA Trigger: AGCGTCATGTGCAGAGACAGGCTTTGATATGTCAACAAAGGATCATGTCTGTGAAATGACTAAAGAAATTGCTGAGAAAATAGAAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | ACCCCTGCTGGTCGTAGTCCGGCGGGAACTGCTCGCTaGACATTGGACACACCTTCCAGTGACTTTCAACGT | + |
|
Preference number: 6 (lower is better) Translates to: TPAGRSPAGTAR*TLDTPSSDFQR Trigger: ACGTTGAAAGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGCCGGACTACGACCAGCAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | CCATCCGGCCGGCTAAGGTTTCGAGCAGGCTGGCTACAGACAACATaGTCTTCCCAAGATGGGACTCGCACAGGTGGCCTTTGGATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSGRLRFRAGWLQTT*SSQDGTRTGGLWIS Trigger: TGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAGCCTGCTCGAAACCTTAGCCGGCCGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | CTGGTCGTAGTCCGGCGGGAACTGCTCGCTGCACATTaGACACACCTTCCAGTGACTTTCAACGTGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVVVRRELLAAH*THLPVTFNVFF Trigger: GAAGAACACGTTGAAAGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGCCGGACTACGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 72 bp | CGGCTAAGGTTTCGAGCAGGCTGGCTACAGACAACATaGTCTTCCCAAGATGGGACTCGCACAGGTGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLRFRAGWLQTT*SSQDGTRTGGL Trigger: AAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAGCCTGCTCGAAACCTTAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | GATACTTCAAGAAGGCCCTTCTGCTCAGCCTGCAATTaGTCACACCGCCCTTTCTCCTGGCTCAGTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DTSRRPFCSACN*SHRPFSWLSSL Trigger: GAGAGAACTGAGCCAGGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | CTTTGTGATACTTCAAGAAGGCCCTTCTGCTCAGCCTaGAATTGCTCACACCGCCCTTTCTCCTGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LCDTSRRPFCSA*NCSHRPFSWLS Trigger: ACTGAGCCAGGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | AGCAGGCTGGCTACAGACAACATTGTCTTCCCAAGATaGGACTCGCACAGGTGGCCTTTGGATTTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRLATDNIVFPR*DSHRWPLDFIW Trigger: CCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | TCTAAACCATCCGGCCGGCTAAGGTTTCGAGCAGGCTaGCTACAGACAACATTGTCTTCCCAAGATGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SKPSGRLRFRAG*LQTTLSSQDGT Trigger: AGTCCCATCTTGGGAAGACAATGTTGTCTGTAGCCAGCCTGCTCGAAACCTTAGCCGGCCGGATGGTTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | GACTACGTAAGTGCTGGTTTGCTGGATCAGGAGGAATaGGCACATTTTCGTCTTCTCTGCTGTCTTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: DYVSAGLLDQEE*AHFRLLCCLRG Trigger: ACCCCGAAGACAGCAGAGAAGACGAAAATGTGCCCATTCCTCCTGATCCAGCAAACCAGCACTTACGTAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | GTAAGGGTTGCCATACTGAAGAACTGGCTGTGCACTTaGCAGTGGAGGAAGGAGCCCATTTTGCTCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: VRVAILKNWLCT*QWRKEPILLRT Trigger: TGTTCTGAGCAAAATGGGCTCCTTCCTCCACTGTCAAGTGCACAGCCAGTTCTTCAGTATGGCAACCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | ACTCTCAAACTTTGTGATACTTCAAGAAGGCCCTTCTaGTCAGCCTGCAATTGCTCACACCGCCCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLKLCDTSRRPF*SACNCSHRPFS Trigger: GGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | CTGCTCCATCTCTTGTTTCCTGTGCTGAGTAAGGGTTaGCATACTGAAGAACTGGCTGTGCACTTGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLHLLFPVLSKG*HTEELAVHLTV Trigger: CACTGTCAAGTGCACAGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCACAGGAAACAAGAGATGGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 72 bp | AGTAAGGGTTGCCATACTGAAGAACTGGCTGTGCACTaGACAGTGGAGGAAGGAGCCCATTTTGCTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SKGCHTEELAVH*TVEEGAHFAQN Trigger: GTTCTGAGCAAAATGGGCTCCTTCCTCCACTGTCAAGTGCACAGCCAGTTCTTCAGTATGGCAACCCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | GAGCCCATTTTGCTCAGAACATGTGTTGAGACACCTTaGGACTTGTTGAGGGCTCTGGCCTTCCAATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EPILLRTCVETP*DLLRALAFQFP Trigger: AGGAAATTGGAAGGCCAGAGCCCTCAACAAGTCTCAAGGTGTCTCAACACATGTTCTGAGCAAAATGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | AAAAGCACCATCTGCTCCATCTCTTGTTTCCTGTGCTaGGTAAGGGTTGCCATACTGAAGAACTGGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KSTICSISCFLC*VRVAILKNWLC Trigger: GCACAGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCACAGGAAACAAGAGATGGAGCAGATGGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS GCA 72 bp | AACTGGAGAAGCAGCTCGGAACTGGAAAGGAGTACTTaGTCCACGAATTTCACCCTTATGGGTGACGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: NWRSSSELERST*STNFTLMGDVT Trigger: TGTTACGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCCTTTCCAGTTCCGAGCTGCTTCTCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CCA 72 bp | ATTGCCTTCATCTTCCATAGTGAGCAGCTCTTCAACTaGAGAAGCAGCTCGGAACTGGAAAGGAGTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IAFIFHSEQLFN*RSSSELERSTC Trigger: GCAAGTACTCCTTTCCAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTGCTCACTATGGAAGATGAAGGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CAA 72 bp | ATTGTCTTCCCAAGATGGGACTCGCACAGGTGGCCTTaGGATTTCATCTGGATAAAAAGCACCATCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVFPRWDSHRWP*DFIWIKSTICS Trigger: GGAGCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 72 bp | AGCAAAAGCCTGCTCCATGACTACGTAAGTGCTGGTTaGCTGGATCAGGAGGAATGGGCACATTTTCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKSLLHDYVSAG*LDQEEWAHFRL Trigger: AAGACGAAAATGTGCCCATTCCTCCTGATCCAGCAAACCAGCACTTACGTAGTCATGGAGCAGGCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | CACATTCACTGCATCACTGAGCTCTTTAGTCAGAAAGATAAGTTCTaGCCGTGTTGCCTGGACTTGTTCCTCCGCTTTGCGAAGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HIHCITELFSQKDKF*PCCLDLFLRFAKLL Trigger: GAGCAACTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGGCAAGAACTTATCTTTCTGACTAAAGAGCTCAGTGATGCAGTGAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | TGGAATCAAAGCAAAAGCCTGCTCCATGACTACGTAAGTGCTGGTTaGCTGGATCAGGAGGAATGGGCACATTTTCGTCTTCTCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WNQSKSLLHDYVSAG*LDQEEWAHFRLLCC Trigger: ACAGCAGAGAAGACGAAAATGTGCCCATTCCTCCTGATCCAGCAAACCAGCACTTACGTAGTCATGGAGCAGGCTTTTGCTTTGATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | AGCTCAAGAAGGCCAGCTTTTGTGGTTACCACCAACATATCGGAATaGCCTTCATCTTCCATAGTGAGCAGCTCTTCAACTGGAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRRPAFVVTTNISE*PSSSIVSSSSTGEA Trigger: TGCTTCTCCAGTTGAAGAGCTGCTCACTATGGAAGATGAAGGCAATTCCGATATGTTGGTGGTAACCACAAAAGCTGGCCTTCTTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CAA 90 bp | ACAGACAACATTGTCTTCCCAAGATGGGACTCGCACAGGTGGCCTTaGGATTTCATCTGGATAAAAAGCACCATCTGCTCCATCTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TDNIVFPRWDSHRWP*DFIWIKSTICSISC Trigger: ACAAGAGATGGAGCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | TTATACAGCTCCTTCTCATCCTTTTCTGTCTGCAGCTaGCATTCAAGCTGCTCTCTCTCATGCTGTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LYSSFSSFSVCS*HSSCSLSCCAF Trigger: GAAGGCACAGCATGAGAGAGAGCAGCTTGAATGTCAGCTGCAGACAGAAAAGGATGAGAAGGAGCTGTATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | ACATCAAAGCTGGAATCAAAGCAAAAGCCTGCTCCATaGCTACGTAAGTGCTGGTTTGCTGGATCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSKLESKQKPAP*LRKCWFAGSGG Trigger: TCCTCCTGATCCAGCAAACCAGCACTTACGTAGTCATGGAGCAGGCTTTTGCTTTGATTCCAGCTTTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | AGATGGGACTCGCACAGGTGGCCTTTGGATTTCATCTaGATAAAAAGCACCATCTGCTCCATCTCTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWDSHRWPLDFI*IKSTICSISCF Trigger: GAAACAAGAGATGGAGCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | GACAACATTGTCTTCCCAAGATGGGACTCGCACAGGTaGCCTTTGGATTTCATCTGGATAAAAAGCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: DNIVFPRWDSHR*PLDFIWIKSTI Trigger: GATGGTGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | GCCTTTGGATTTCATCTGGATAAAAAGCACCATCTGCTCCATCTCTaGTTTCCTGTGCTGAGTAAGGGTTGCCATACTGAAGAACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AFGFHLDKKHHLLHL*FPVLSKGCHTEELA Trigger: AGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCACAGGAAACAAGAGATGGAGCAGATGGTGCTTTTTATCCAGATGAAATCCAAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | AGAAGCAGAAGTAGAGGCAGCCGGGTCTGTATTTATTaGAGCATCGTTCACTTTCTGCTGACTCCCCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSRSRGSRVCIY*SIVHFLLTPHF Trigger: AAAATGGGGAGTCAGCAGAAAGTGAACGATGCTTCAATAAATACAGACCCGGCTGCCTCTACTTCTGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | TCTTTAGTCAGAAAGATAAGTTCTTGCCGTGTTGCCTaGACTTGTTCCTCCGCTTTGCGAAGTTGCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLVRKISSCRVA*TCSSALRSCSF Trigger: AAAGGAGCAACTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGGCAAGAACTTATCTTTCTGACTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 72 bp | AGGCCAGCTTTTGTGGTTACCACCAACATATCGGAATaGCCTTCATCTTCCATAGTGAGCAGCTCTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RPAFVVTTNISE*PSSSIVSSSST Trigger: AGTTGAAGAGCTGCTCACTATGGAAGATGAAGGCAATTCCGATATGTTGGTGGTAACCACAAAAGCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CAA 72 bp | GAGGTTGTAAGCAGGAGAGCTCTGTACAAATTTTCCTaGTCAGCCAAGCAGGACTGCAGTTTGCTAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EVVSRRALYKFS*SAKQDCSLLIS Trigger: AGAGATTAGCAAACTGCAGTCCTGCTTGGCTGACAAGGAAAATTTGTACAGAGCTCTCCTGCTTACAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 72 bp | GGGTCTTCTCAATTTTCAGCTCAAGAAGGCCAGCTTTaGTGGTTACCACCAACATATCGGAATTGCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSSQFSAQEGQL*WLPPTYRNCLH Trigger: ATGAAGGCAATTCCGATATGTTGGTGGTAACCACAAAAGCTGGCCTTCTTGAGCTGAAAATTGAGAAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS TCA 72 bp | CTTCATAAACTCTTCGTTTTCCACTCTCAAACTTTGTaGTACTTCAAGAAGGCCCTTCTGCTCAGCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHKLFVFHSQTL*YFKKALLLSLQ Trigger: TTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCACAAAGTTTGAGAGTGGAAAACGAAGAGTTTATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | GGAGGGAACATTAATTCACAGAGGGGACATTTCTTGTaGACATCAAAGCTGGAATCAAAGCAAAAGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGNINSQRGHFL*TSKLESKQKPA Trigger: AGCAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACAAGAAATGTCCCCTCTGTGAATTAATGTTCCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CCA 72 bp | TCTTCTCAATTTTCAGCTCAAGAAGGCCAGCTTTTGTaGTTACCACCAACATATCGGAATTGCCTTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSQFSAQEGQLL*LPPTYRNCLHL Trigger: AAGATGAAGGCAATTCCGATATGTTGGTGGTAACCACAAAAGCTGGCCTTCTTGAGCTGAAAATTGAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CAA 90 bp | TCTTTATTTGAGGTTGTAAGCAGGAGAGCTCTGTACAAATTTTCCTaGTCAGCCAAGCAGGACTGCAGTTTGCTAATCTCTTCTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLFEVVSRRALYKFS*SAKQDCSLLISSLK Trigger: TTTCAAAGAAGAGATTAGCAAACTGCAGTCCTGCTTGGCTGACAAGGAAAATTTGTACAGAGCTCTCCTGCTTACAACCTCAAATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | AAGGAGTACTTGCTCCACGAATTTCACCCTTATGGGTaGCGTAACAGAACTGATAAAATTCTCCATCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: KEYLLHEFHPYG*RNRTDKILHHH Trigger: ATGATGATGGAGAATTTTATCAGTTCTGTTACGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080723.11 ENSMUST00000138040.8 ENSMUST00000149588.8 |
||
| CDS CCA 72 bp | ATTTTCTTTGTGAAGACACTGTTAGTACTCGCTGCCTaGTCTGAAAGTTTGTTTATTTGCTTTTGGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IFFVKTLLVLAA*SESLFICFWSL Trigger: GAGGCTCCAAAAGCAAATAAACAAACTTTCAGACCAGGCAGCGAGTACTAACAGTGTCTTCACAAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | AGAGCTCTGTACAAATTTTCCTTGTCAGCCAAGCAGGACTGCAGTTaGCTAATCTCTTCTTTGAAATGGGTAATCATGCTTTCTTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RALYKFSLSAKQDCS*LISSLKWVIMLSLF Trigger: AAACAAAGAAAGCATGATTACCCATTTCAAAGAAGAGATTAGCAAACTGCAGTCCTGCTTGGCTGACAAGGAAAATTTGTACAGAGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS TCA 72 bp | TTATGTGTCACTGATACAATGTCCTCTTCAAGCTGTTaGACTTTAGCTGTAGCATCACTGTATCTCTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: LCVTDTMSSSSC*TLAVASLYLFI Trigger: TATGAAGAGATACAGTGATGCTACAGCTAAAGTTCAACAGCTTGAAGAGGACATTGTATCAGTGACACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||
| CDS CAA 90 bp | TTTTCCTTGTCAGCCAAGCAGGACTGCAGTTTGCTAATCTCTTCTTaGAAATGGGTAATCATGCTTTCTTTGTTTCCATCTAAATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSLSAKQDCSLLISS*KWVIMLSLFPSKFF Trigger: AAAGAATTTAGATGGAAACAAAGAAAGCATGATTACCCATTTCAAAGAAGAGATTAGCAAACTGCAGTCCTGCTTGGCTGACAAGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080723.11 |
||