Pregenerated sensors for TATDN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026632Ensembl transcript IDs: ENSMUST00000027945.6, ENSMUST00000085633.12, ENSMUST00000110891.8, ENSMUST00000110893.10
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCCACTAAAGCAAGCCCTTGCTTTCCCCAGCGCTGCCCTGGGCTaGCTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTTCTGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RPLKQALAFPSAALG*LGLQGVTLKLFLKQ Trigger: CTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 90 bp | CCATGTAAGATGGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCCTTaGTTTCCCCAGCGCTGCCCTGGGCTGACTTGGCTTGCAGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PCKMASFSEATKASP*FPQRCPGLTWLAGG Trigger: ACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCATCTTACATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 90 bp | TCTTTCTCTGAGGCCACTAAAGCAAGCCCTTGCTTTCCCCAGCGCTaGCCTGGGCTGACTTGGCTTGCAGGGGGTGACTTTGAAGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SFSEATKASPCFPQR*PGLTWLAGGDFEAL Trigger: AAGAGCTTCAAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCTCAGAGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR TCA 90 bp | CAGTCTGAATGCATTCCGCGTCGTCACTTCTCGGACTTCTTCCACTaGAATCCCTTTCACCTGGGCAATGAACTCTGCTGCGATGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: QSECIPRRHFSDFFH*NPFHLGNELCCDGN Trigger: ATTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGAGAAGTGACGACGCGGAATGCATTCAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 90 bp | GTTTTTAGAAATAATTTTTATATTCCGTGTGTCTATATAGAGATATaGCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAG | + |
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Preference number: 1 (lower is better) Translates to: VFRNNFYIPCVYIEI*HQCASVREGWRELQ Trigger: CTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGACACACGGAATATAAAAATTATTTCTAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110893.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGAGGCCACTAAAGCAAGCCCTTGCTTTCCCCAGCGCTGCCCTGGGCTGCTTTCACCTGGGCAATaGACTCTGCTGCGATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FSEATKASPCFPQRCPGLLSPGQ*TLLRWK Trigger: TTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAG...CAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCTCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCCCCAGCGCTGCCCTGGGCTGACTTGGCTTGCAGGGGGTGACTTTGAAGGGAAACAGTCTGAATaGATTCCGCGTCGTCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: CFPQRCPGLTWLAGGDFEGKQSE*IPRRHF Trigger: GAAGTGACGACGCGGAATGCATTCAGACTGTTTCCC...TTCAAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGAGCGCTGCCCTGGGCTaGCTTGGCTTGCAGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HFCKTVTASHVRWLLSLRSAALG*LGLQGV Trigger: CACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCT...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGACTAAAGCAAGCCCTTaGTTTCCCCAGCGCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YATSVLVSEKAGGNYRQLTKASP*FPQRCP Trigger: AGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGT...CAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCTCGGACTTCTTCCACTaGAATCCCTTTCACCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTASHVRWLLSLRPLKQASDFFH*NPFHLG Trigger: GCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGA...GGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTTCTGAAGCAGGCTCTGCAGCTTCTGGGCAATGAACTCTaGTGCGATGGAAATGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLQGVTLKLFLKQALQLLGNEL*CDGNVA Trigger: TGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAG...AAGCTGCAGAGCCTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTGGGAAACAGTCTGAATGCATTCCGCGTCGTCACTTCTCGGACTTCTTCGAAATCCCTTTCACCTaGGCAATGAACTCTGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: QLGKQSECIPRRHFSDFFEIPFT*AMNSAA Trigger: CGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTC...GAAGAAGTCCGAGAAGTGACGACGCGGAATGCATTCAGACTGTTTCCCAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATAGGGAAACAGTCTGAATaGATTCCGCGTCGTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: ASVREGWRELQAVEPPNIGKQSE*IPRRHF Trigger: GAAGTGACGACGCGGAATGCATTCAGACTGTTTCCC...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACAGTGTCAGAGAAGGCTaGAGGGAATTACAGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHSVREG*RELQAV Trigger: AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACT...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCCTTCTTTCACCTGGGCAATaGACTCTGCTGCGATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TASHVRWLLSLRPLKQALLSPGQ*TLLRWK Trigger: TTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAG...AAGGGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR GCA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTCTGGGCAATGAACTCTaGTGCGATGGAAATGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ICHQCASVREGWRELQAVLGNEL*CDGNVA Trigger: TGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAG...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAAACCCAACATAGCTGCTaGGAACTGAACACGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VYIEICHQCASVREGWRETQHSC*ELNTSP Trigger: AGGACTCGTGTTCAGTTCCCAGCAGCTATGTTGGGT...TTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAAGTCTATATAGAGATATaGCACCAGTGTGCTAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VYIEICHQCASVREGWREVYIEI*HQCASV Trigger: GACACTAGCACACTGGTGGCATATCTCTATATAGAC...TTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGGAAATCCCTTTCACCTaGGCAATGAACTCTGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: HFCKTVTASHVRWLLSLREIPFT*AMNSAA Trigger: CGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTC...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 72 bp | GAGGCCACTAAAGCAAGCCCTTGCTTTCCCCAGCGCTaGCCTGGGCTGACTTGGCTTGCAGGGGGTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: EATKASPCFPQR*PGLTWLAGGDF Trigger: AAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR TCA 72 bp | AAGCAAGCCCTTGCTTTCCCCAGCGCTGCCCTGGGCTaGCTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KQALAFPSAALG*LGLQGVTLKLF Trigger: AAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCAAGGGCTTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 72 bp | CTGAAGCAGGCTCTGCAGCTTGGGAAACAGTCTGAATaGATTCCGCGTCGTCACTTCTCGGACTTCTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LKQALQLGKQSE*IPRRHFSDFFH Trigger: GTGGAAGAAGTCCGAGAAGTGACGACGCGGAATGCATTCAGACTGTTTCCCAAGCTGCAGAGCCTGCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR TCA 72 bp | TGCATTCCGCGTCGTCACTTCTCGGACTTCTTCCACTaGAATCCCTTTCACCTGGGCAATGAACTCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: CIPRRHFSDFFH*NPFHLGNELCC Trigger: GCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGAGAAGTGACGACGCGGAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCATTGCAGGGGGTGACTTaGAAGCTCTTTCTGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SVLVSEKAGGNYRQLNHPLQGVT*KLFLKQ Trigger: CTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAA...TGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR CCA 72 bp | GAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTaGAGGGAATTACAGGCAGTTGAACCACCCAACATA | + |
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Preference number: 3 (lower is better) Translates to: EICHQCASVREG*RELQAVEPPNI Trigger: TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| 3UTR CCA 72 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATaGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HFCKTVTASHVR*LLSLRPLKQAL Trigger: AAGGGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| 3UTR GCA 72 bp | AATAATTTTTATATTCCGTGTGTCTATATAGAGATATaGCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: NNFYIPCVYIEI*HQCASVREGWR Trigger: CCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGACACACGGAATATAAAAATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | TGGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCCTTGCTTTCCCCAGCGCTGCCCCCTGGCGCCTTCCATaGCTACCGATGGCCGACCGT | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRPLKQALAFPSAAPWRLP*LPMADR Trigger: ACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGG...GGCAGCGCTGGGGAAAGCAAGGGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110891.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTCCCCAGCGCTGCCCTGGGCTGACTTGGCTTGCAGGGGGTGACTTTGAAGCGGAGAGATGGCAGTaGCAGTCCACTAACCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: CFPQRCPGLTWLAGGDFEAERWQ*QSTNPK Trigger: TTTGGGGTTAGTGGACTGTCACTGCCATCTCTCCGC...TTCAAAGTCACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCTGGGGAAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
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| CDS-3UTR TCA 90 bp | GAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAAGCGCTGCCCTGGGCTaGCTTGGCTTGCAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EICHQCASVREGWRELQASAALG*LGLQGV Trigger: CACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCT...TGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS-3UTR TCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATAAGCGCTGCCCTGGGCTaGCTTGGCTTGCAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNISAALG*LGLQGV Trigger: CACCCCCTGCAAGCCAAGTCAGCCCAGGGCAGCGCT...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCCTGGCGCCTTCCATaGCTACCGATGGCCGACCGT | + |
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Preference number: 4 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHPWRLP*LPMADR Trigger: ACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGG...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | CTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTTCTGAAGCAGGCTCTGCAGCTTCGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGLQGVTLKLFLKQALQLRWMGE*RSSNRP Trigger: GGGCCGGTTACTACTTCTCCATTCCCCCATCCATCG...AAGCTGCAGAGCCTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110891.8 |
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| CDS-3UTR TCA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACGCGGAGAGATGGCAGTaGCAGTCCACTAACCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHAERWQ*QSTNPK Trigger: TTTGGGGTTAGTGGACTGTCACTGCCATCTCTCCGC...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR TCA 90 bp | AGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAGCGGAGAGATGGCAGTaGCAGTCCACTAACCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SVLVSEKAGGNYRQLNHPAERWQ*QSTNPK Trigger: TTTGGGGTTAGTGGACTGTCACTGCCATCTCTCCGC...TGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR TCA 90 bp | GAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGCGGAGAGATGGCAGTaGCAGTCCACTAACCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EICHQCASVREGWRELQAAERWQ*QSTNPK Trigger: TTTGGGGTTAGTGGACTGTCACTGCCATCTCTCCGC...TGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | TATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGCGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YATSVLVSEKAGGNYRQLRWMGE*RSSNRP Trigger: GGGCCGGTTACTACTTCTCCATTCCCCCATCCATCG...CAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | GAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCACGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: EICHQCASVREGWRELQARWMGE*RSSNRP Trigger: GGGCCGGTTACTACTTCTCCATTCCCCCATCCATCG...TGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR CCA 90 bp | TATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGTTCCATGGCTACCGATaGCCGACCGTCAAATGCATG | + |
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Preference number: 4 (lower is better) Translates to: YATSVLVSEKAGGNYRQLFHGYR*PTVKCM Trigger: CATGCATTTGACGGTCGGCCATCGGTAGCCATGGAA...CAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR TCA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCTTTCACCTGGGCAATaGACTCTGCTGCGATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHLSPGQ*TLLRWK Trigger: TTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAG...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS-3UTR TCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATATCGGACTTCTTCCACTaGAATCCCTTTCACCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNISDFFH*NPFHLG Trigger: GCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGA...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS-3UTR GCA 90 bp | AGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAGGGAAACAGTCTGAATaGATTCCGCGTCGTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SVLVSEKAGGNYRQLNHPGKQSE*IPRRHF Trigger: GAAGTGACGACGCGGAATGCATTCAGACTGTTTCCC...TGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS-3UTR GCA 90 bp | CCGTGTGTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGTGGCCGACCGTCAAATaGATGCAGCAGAACCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PCVYIEICHQCASVREGWWPTVK*MQQNLF Trigger: AAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCA...CCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGACACACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS-3UTR GCA 90 bp | GTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGCCACTAAAGCAAGCCTGGCCGACCGTCAAATaGATGCAGCAGAACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTASHVRWLLSLRPLKQAWPTVK*MQQNLF Trigger: AAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCA...GGCTTGCTTTAGTGGCCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110891.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCACTGGGCAATGAACTCTaGTGCGATGGAAATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLVSEKAGGNYRQLNHPLGNEL*CDGNVA Trigger: TGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAG...TGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGGGAAACAGTCTGAATaGATTCCGCGTCGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICHQCASVREGWRELQAVGKQSE*IPRRHF Trigger: GAAGTGACGACGCGGAATGCATTCAGACTGTTTCCC...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAAGCTCTTTCTGAAGCAGGCTCTGCAGCTTGGGAAACAGTCTGAATGCTTCCATGGCTACCGATaGCCGACCGTCAAATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLKLFLKQALQLGKQSECFHGYR*PTVKCM Trigger: CATGCATTTGACGGTCGGCCATCGGTAGCCATGGAA...GCATTCAGACTGTTTCCCAAGCTGCAGAGCCTGCTTCAGAAAGAGCTTCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110891.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATAGAAATCCCTTTCACCTaGGCAATGAACTCTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNIEIPFT*AMNSAA Trigger: CGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTC...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATACCAGCTGAGCGTGAGTaGACATTTAGAGGCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNIPAERE*TFRGTF Trigger: AAATGTGCCTCTAAATGTGCACTCACGCTCAGCTGG...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | TTGGGAAACAGTCTGAATGCATTCCGCGTCGTCACTTCTCGGACTTCTTCCACTCGACCGTCAAATGCATaGAGCAGAACCTGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNSLNAFRVVTSRTSSTRPSNA*SRTCFA Trigger: TGCAAAACAGGTTCTGCTGCATGCATTTGACGGTCG...AGTGGAAGAAGTCCGAGAAGTGACGACGCGGAATGCATTCAGACTGTTTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110891.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATGGCCGACCGTCAAATaGATGCAGCAGAACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYIEICHQCASVREGWREWPTVK*MQQNLF Trigger: AAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCA...TTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTCTATATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATACTGGGCAATGAACTCTaGTGCGATGGAAATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNILGNEL*CDGNVA Trigger: TGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAG...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACTCTTTCAAATTCTCCTaGATGTTCAGCAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHSFKFS*MFSNCH Trigger: GTGGCAGTTGCTGAACATGCAGGAGAATTTGAAAGA...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | GAGATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCATCTTTCAAATTCTCCTaGATGTTCAGCAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EICHQCASVREGWRELQASFKFS*MFSNCH Trigger: GTGGCAGTTGCTGAACATGCAGGAGAATTTGAAAGA...TGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR TCA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGTCGGACTTCTTCCACTaGAATCCCTTTCACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFCKTVTASHVRWLLSLRSDFFH*NPFHLG Trigger: GCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGA...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | GCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCAACATATCTTTCAAATTCTCCTaGATGTTCAGCAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASVREGWRELQAVEPPNISFKFS*MFSNCH Trigger: GTGGCAGTTGCTGAACATGCAGGAGAATTTGAAAGA...TATGTTGGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGCGACCGTCAAATGCATaGAGCAGAACCTGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HFCKTVTASHVRWLLSLRRPSNA*SRTCFA Trigger: TGCAAAACAGGTTCTGCTGCATGCATTTGACGGTCG...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTTATATTCCGTGTGTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCTTCCATGGCTACCGATaGCCGACCGTCAAATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NFYIPCVYIEICHQCASVFHGYR*PTVKCM Trigger: CATGCATTTGACGGTCGGCCATCGGTAGCCATGGAA...GACACTAGCACACTGGTGGCATATCTCTATATAGACACACGGAATATAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR GCA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGTCTTTCAAATTCTCCTaGATGTTCAGCAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFCKTVTASHVRWLLSLRSFKFS*MFSNCH Trigger: GTGGCAGTTGCTGAACATGCAGGAGAATTTGAAAGA...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | TGGATGGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATaGCTACCGATGGCCGACCGTCAAATGCATGCAGCAGAACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WMGEWRSSNRPWRLP*LPMADRQMHAAEPV Trigger: AACAGGTTCTGCTGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | CACTTCGTACGATGGATGGGGGAATGGAGAAGTAGTAACCGGCCCTaGCGCCTTCCATGGCTACCGATGGCCGACCGTCAAATGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: HFVRWMGEWRSSNRP*RLPWLPMADRQMHA Trigger: TGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | AGGCAGCTGTTTCACAAGCTTCTGCTGTCCACTTCGTACGATGGATaGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLFHKLLLSTSYDG*GNGEVVTGPGAFHG Trigger: GCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGCTTGTGAAACAGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
||
| CDS CCA 90 bp | AATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGGCTACCGATaGCCGACCGTCAAATGCATGCAGCAGAACCTGTTTTGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NGEVVTGPGAFHGYR*PTVKCMQQNLFCTL Trigger: CAAGGTGCAAAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | GTTTCACAAGCTTCTGCTGTCCACTTCGTACGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGGCTACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSQASAVHFVRWMGE*RSSNRPWRLPWLPM Trigger: CATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGCTTGTGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
||
| CDS CCA 90 bp | TCAGAGGCAGCTGTTTCACAAGCTTCTGCTGTCCACTTCGTACGATaGATGGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEAAVSQASAVHFVR*MGEWRSSNRPWRLP Trigger: TGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGCTTGTGAAACAGCTGCCTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
||
| CDS CCA 90 bp | TCACAAGCTTCTGCTTCTGTCCACTTCGTACGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGGCTACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQASASVHFVRWMGE*RSSNRPWRLPWLPM Trigger: CATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGAAGCAGAAGCTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | CAGCTGTTTCACAAGCTTCTGCTTCTGTCCACTTCGTACGATGGATaGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLFHKLLLLSTSYDG*GNGEVVTGPGAFHG Trigger: GCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGAAGCAGAAGCTTGTGAAACAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTTCTGAAGCAGGCTCTGCAGCTTGGCACATTTAGCCTTTaGGCCAGTTGCACTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGLQGVTLKLFLKQALQLGTFSL*ASCTCL Trigger: CAGACAAGTGCAACTGGCCAAAAGGCTAAATGTGCC...AAGCTGCAGAGCCTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCGGCACATTTAGCCTTTaGGCCAGTTGCACTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCASVREGWRELQAVEPPGTFSL*ASCTCL Trigger: CAGACAAGTGCAACTGGCCAAAAGGCTAAATGTGCC...GGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACCCTTGCAGGGGGTGACTTaGAAGCTCTTTCTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCASVREGWRELQAVEPPLQGVT*KLFLKQ Trigger: CTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAA...GGGTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS TCA 90 bp | ATGCATGCAGCAGAACCTGTTTTGCACCTTGTTCACGTAAGAGGCTaGTGGTGGGTCTTCCAGCTGAGCGTGAGTGCACATTTAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MHAAEPVLHLVHVRG*WWVFQLSVSAHLEA Trigger: TGCCTCTAAATGTGCACTCACGCTCAGCTGGAAGACCCACCATCAGCCTCTTACGTGAACAAGGTGCAAAACAGGTTCTGCTGCATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 90 bp | CGCGTCGTCACTTCTCGGACTTCTTCCACTGAAATCCCTTTCACCTaGGCAATGAACTCTGCTGCGATGGAAATGTTGCAGGGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RVVTSRTSSTEIPFT*AMNSAAMEMLQGSF Trigger: GAATGAACCCTGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTCAGTGGAAGAAGTCCGAGAAGTGACGACGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS GCA 90 bp | TGTTCACGTAAGAGGCTGATGGTGGGTCTTCCAGCTGAGCGTGAGTaGACATTTAGAGGCACATTTAGCCTTTTGGCCAGTTGCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRKRLMVGLPAERE*TFRGTFSLLASCTC Trigger: ACAAGTGCAACTGGCCAAAAGGCTAAATGTGCCTCTAAATGTGCACTCACGCTCAGCTGGAAGACCCACCATCAGCCTCTTACGTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGGCACATTTAGCCTTTaGGCCAGTTGCACTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICHQCASVREGWRELQAVGTFSL*ASCTCL Trigger: CAGACAAGTGCAACTGGCCAAAAGGCTAAATGTGCC...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGCAGCAGAACCTGTTTaGCACCTTGTTCACGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICHQCASVREGWRELQAVAAEPV*HLVHVR Trigger: TCTTACGTGAACAAGGTGCAAAACAGGTTCTGCTGC...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTTGCAGGGGGTGACTTTGAAGCTCTTTCTGAAGCAGGCTCTGCAGCTTTTAATGTCACGCTTCTaGGTTTTTCTGGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLQGVTLKLFLKQALQLLMSRF*VFLVKA Trigger: AGCTTTCACCAGAAAAACCAAGAAGCGTGACATTAA...AAGCTGCAGAGCCTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAAGCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000085633.12 ENSMUST00000110891.8 |
||
| CDS-3UTR CAA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGCCAACAAGCGATCCTaGTACTTCTCAATAATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ICHQCASVREGWRELQAVANKRS*YFSIIG Trigger: GCCTATTATTGAGAAGTACAAGGATCGCTTGTTGGC...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTGAACCACTTAATGTCACGCTTCTaGGTTTTTCTGGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSVLVSEKAGGNYRQLNHLMSRF*VFLVKA Trigger: AGCTTTCACCAGAAAAACCAAGAAGCGTGACATTAA...GTGGTTCAACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS GCA 90 bp | GAGCGTGAGTGCACATTTAGAGGCACATTTAGCCTTTTGGCCAGTTaGACTTGTCTGATTAGGACTTGTCTTTGTTCTTCCTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERECTFRGTFSLLAS*TCLIRTCLCSSFSS Trigger: TGAGGAGAAGGAAGAACAAAGACAAGTCCTAATCAGACAAGTGCAACTGGCCAAAAGGCTAAATGTGCCTCTAAATGTGCACTCACGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | ATATGCCACCAGTGTGCTAGTGTCAGAGAAGGCTGGAGGGAATTACAGGCAGTTTTAATGTCACGCTTCTaGGTTTTTCTGGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ICHQCASVREGWRELQAVLMSRF*VFLVKA Trigger: AGCTTTCACCAGAAAAACCAAGAAGCGTGACATTAA...AACTGCCTGTAATTCCCTCCAGCCTTCTCTGACACTAGCACACTGGTGGCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTAAAACTGTGACTGCTAGCCATGTAAGATGGCTTCTTTCTCTGAGGGCAGCAGAACCTGTTTaGCACCTTGTTCACGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HFCKTVTASHVRWLLSLRAAEPV*HLVHVR Trigger: TCTTACGTGAACAAGGTGCAAAACAGGTTCTGCTGC...CCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTTATATTCCGTGTGTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCTTGCAGGGGGTGACTTaGAAGCTCTTTCTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NFYIPCVYIEICHQCASVLQGVT*KLFLKQ Trigger: CTGCTTCAGAAAGAGCTTCAAAGTCACCCCCTGCAA...GACACTAGCACACTGGTGGCATATCTCTATATAGACACACGGAATATAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTTATATTCCGTGTGTCTATATAGAGATATGCCACCAGTGTGCTAGTGTCTTAATGTCACGCTTCTaGGTTTTTCTGGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NFYIPCVYIEICHQCASVLMSRF*VFLVKA Trigger: AGCTTTCACCAGAAAAACCAAGAAGCGTGACATTAA...GACACTAGCACACTGGTGGCATATCTCTATATAGACACACGGAATATAAAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 72 bp | CGATGGATGGGGGAATGGAGAAGTAGTAACCGGCCCTaGCGCCTTCCATGGCTACCGATGGCCGACCGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RWMGEWRSSNRP*RLPWLPMADRQ Trigger: TTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
||
| CDS CCA 72 bp | GTAGTAACCGGCCCTGGCGCCTTCCATGGCTACCGATaGCCGACCGTCAAATGCATGCAGCAGAACCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVTGPGAFHGYR*PTVKCMQQNLF Trigger: AAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | GAATGGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATaGCTACCGATGGCCGACCGTCAAATGCATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: EWRSSNRPWRLP*LPMADRQMHAA Trigger: TGCTGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | GCTTCTGCTGTCCACTTCGTACGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ASAVHFVRWMGE*RSSNRPWRLPW Trigger: CCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
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| CDS GCA 72 bp | GGCGCCTTCCATGGCTACCGATGGCCGACCGTCAAATaGATGCAGCAGAACCTGTTTTGCACCTTGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: GAFHGYRWPTVK*MQQNLFCTLFT Trigger: CGTGAACAAGGTGCAAAACAGGTTCTGCTGCATGCATTTGACGGTCGGCCATCGGTAGCCATGGAAGGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | TCTGCTTCTGTCCACTTCGTACGATGGATGGGGGAATaGAGAAGTAGTAACCGGCCCTGGCGCCTTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: SASVHFVRWMGE*RSSNRPWRLPW Trigger: CCATGGAAGGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGAAGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | CACAAGCTTCTGCTTCTGTCCACTTCGTACGATGGATaGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: HKLLLLSTSYDG*GNGEVVTGPGA Trigger: GGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGAAGCAGAAGCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | TTTCACAAGCTTCTGCTGTCCACTTCGTACGATGGATaGGGGAATGGAGAAGTAGTAACCGGCCCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: FHKLLLSTSYDG*GNGEVVTGPGA Trigger: GGCGCCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGCTTGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
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| CDS CCA 72 bp | GCTGTTTCACAAGCTTCTGCTGTCCACTTCGTACGATaGATGGGGGAATGGAGAAGTAGTAACCGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVSQASAVHFVR*MGEWRSSNRPW Trigger: CCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGCAGAAGCTTGTGAAACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027945.6 |
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| CDS TCA 72 bp | GCAGAACCTGTTTTGCACCTTGTTCACGTAAGAGGCTaGTGGTGGGTCTTCCAGCTGAGCGTGAGTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: AEPVLHLVHVRG*WWVFQLSVSAH Trigger: ATGTGCACTCACGCTCAGCTGGAAGACCCACCATCAGCCTCTTACGTGAACAAGGTGCAAAACAGGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027945.6 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CCA 72 bp | GTTTCACAAGCTTCTGCTTCTGTCCACTTCGTACGATaGATGGGGGAATGGAGAAGTAGTAACCGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSQASASVHFVR*MGEWRSSNRPW Trigger: CCAGGGCCGGTTACTACTTCTCCATTCCCCCATCCATCGTACGAAGTGGACAGAAGCAGAAGCTTGTGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CAA 90 bp | GAAATCCCTTTCACCTGGGCAATGAACTCTGCTGCGATGGAAATGTaGCAGGGTTCATTCCGTGTCAGCTTTTCTGGTCCTAGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EIPFTWAMNSAAMEM*QGSFRVSFSGPSAG Trigger: ACCTGCGCTAGGACCAGAAAAGCTGACACGGAATGAACCCTGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAAAGGGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS GCA 72 bp | AAGAGGCTGATGGTGGGTCTTCCAGCTGAGCGTGAGTaGACATTTAGAGGCACATTTAGCCTTTTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KRLMVGLPAERE*TFRGTFSLLAS Trigger: ACTGGCCAAAAGGCTAAATGTGCCTCTAAATGTGCACTCACGCTCAGCTGGAAGACCCACCATCAGCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS TCA 72 bp | TTTCACAAGCTTCTGCTTCTTGTTCACGTAAGAGGCTaGTGGTGGGTCTTCCAGCTGAGCGTGAGTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: FHKLLLLVHVRG*WWVFQLSVSAH Trigger: ATGTGCACTCACGCTCAGCTGGAAGACCCACCATCAGCCTCTTACGTGAACAAGAAGCAGAAGCTTGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085633.12 |
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| CDS CAA 72 bp | TTCACCTGGGCAATGAACTCTGCTGCGATGGAAATGTaGCAGGGTTCATTCCGTGTCAGCTTTTCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FTWAMNSAAMEM*QGSFRVSFSGP Trigger: AGGACCAGAAAAGCTGACACGGAATGAACCCTGCAACATTTCCATCGCAGCAGAGTTCATTGCCCAGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027945.6 ENSMUST00000110893.10 |
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| CDS CAA 90 bp | GGGGTGAAGTCTAGCCCCACCTCTCCGATTGCCAACAAGCGATCCTaGTACTTCTCAATAATAGGCAAAGCTACATCCAAATCCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: GVKSSPTSPIANKRS*YFSIIGKATSKSFN Trigger: ATTAAAGGATTTGGATGTAGCTTTGCCTATTATTGAGAAGTACAAGGATCGCTTGTTGGCAATCGGAGAGGTGGGGCTAGACTTCACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CAA 72 bp | TCTAGCCCCACCTCTCCGATTGCCAACAAGCGATCCTaGTACTTCTCAATAATAGGCAAAGCTACATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSPTSPIANKRS*YFSIIGKATSK Trigger: TTTGGATGTAGCTTTGCCTATTATTGAGAAGTACAAGGATCGCTTGTTGGCAATCGGAGAGGTGGGGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS GCA 72 bp | CATAATTCTTTCAAATTCTCCTGCATGTTCAGCAACTaGCACAAGGGCCATGACATTAGCCTTCCTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HNSFKFSCMFSN*HKGHDISLPGF Trigger: AAAGCCAGGAAGGCTAATGTCATGGCCCTTGTGGCAGTTGCTGAACATGCAGGAGAATTTGAAAGAATTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS GCA 72 bp | TGCACATTTAGAGGCACATTTAGCCTTTTGGCCAGTTaGACTTGTCTGATTAGGACTTGTCTTTGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CTFRGTFSLLAS*TCLIRTCLCSS Trigger: GGAAGAACAAAGACAAGTCCTAATCAGACAAGTGCAACTGGCCAAAAGGCTAAATGTGCCTCTAAATGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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| CDS CAA 72 bp | GCAAAGCTACATCCAAATCCTTTAATGTCACGCTTCTaGGTTTTTCTGGTGAAAGCTCTTGAACTGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: AKLHPNPLMSRF*VFLVKALELGE Trigger: TTCACCCAGTTCAAGAGCTTTCACCAGAAAAACCAAGAAGCGTGACATTAAAGGATTTGGATGTAGCTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027945.6 ENSMUST00000085633.12 ENSMUST00000110891.8 ENSMUST00000110893.10 |
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