Pregenerated sensors for TATDN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056952Ensembl transcript IDs: ENSMUST00000089018.11, ENSMUST00000113022.8, ENSMUST00000138420.2, ENSMUST00000153661.2, ENSMUST00000204753.3
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATaGTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCG | + |
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Preference number: 1 (lower is better) Translates to: PTHPSPWTQTDGALL*YQATGHPLPEDDCS Trigger: CGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| 3UTR GCA 90 bp | AGATCTCCTATTCAACTGTATTCAAAACTTTCCTTGGGCACAGGCTaGCCAAGGCTGAGACTAGACATTCGAGTTACTAGTTTACACCAG | + |
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Preference number: 1 (lower is better) Translates to: RSPIQLYSKLSLGTG*PRLRLDIRVTSLHQ Trigger: CTGGTGTAAACTAGTAACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATACAGTTGAATAGGAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAGACGGAGCCCTCCTATaGTATCAGGCCACTGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PGQRAGIQTGHLIVHCVIDGALL*YQATGH Trigger: ATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTC...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| 3UTR-3UTR TCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGAACATCCTGGTGCGCTaGGTTTTGACAGGATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQNILVR*VLTGSP Trigger: TGGAGATCCTGTCAAAACTCAGCGCACCAGGATGTT...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACGGAGCCCTCCTATaGTATCAGGCCACTGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PGALSFDRISNTSFTLDTDGALL*YQATGH Trigger: ATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTC...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATATGGTGCGCTGAGTTTTaGCAGGATCTCCAACACATC | + |
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Preference number: 2 (lower is better) Translates to: PGQRAGIQTGHLIVHCVIWCAEF*QDLQHI Trigger: GATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCA...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATGCTATCAGGCCACTaGTCATCCTTTGCCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PGQRAGIQTGHLIVHCVIMLSGH*SSFARR Trigger: TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCAT...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATTGGTGCGCTGAGTTTTaGCAGGATCTCCAACACATC | + |
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Preference number: 2 (lower is better) Translates to: RPKGRDPDWPSHCTLCHNWCAEF*QDLQHI Trigger: GATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCA...ATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAATGCTATCAGGCCACTaGTCATCCTTTGCCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PGALSFDRISNTSFTLDTMLSGH*SSFARR Trigger: TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCAT...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGTATTCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATAACATGAGGCTCTTATaGCCTTTGCCAGAAGATGAC | + |
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Preference number: 2 (lower is better) Translates to: TVFKTFLGHRLPKAETRHNMRLL*PLPEDD Trigger: GTCATCTTCTGGCAAAGGTCATAAGAGCCTCATGTT...ATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAGCCACTGGTCATCCTTaGCCAGAAGATGACTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAATGHP*PEDDCS Trigger: CGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGC...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| 3UTR-3UTR CAA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGAACACATCCTTCACCTaGGACACAGACAGACGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQNTSFT*DTDRRS Trigger: GCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGTT...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| 3UTR GCA 72 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATaGTATCAGGCCACTGGTCATCCTTTGCCAGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: PSPWTQTDGALL*YQATGHPLPED Trigger: ATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| 3UTR-3UTR CAA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAAACACATCCTTCACCTaGGACACAGACAGACGGAGC | + |
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Preference number: 3 (lower is better) Translates to: KTTPHPKSIPQYPPTHPANTSFT*DTDRRS Trigger: GCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGTT...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAAACACATCCTTCACCTaGGACACAGACAGACGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PGQRAGIQTGHLIVHCVINTSFT*DTDRRS Trigger: GCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGTT...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| 3UTR TCA 72 bp | CTTGTGATGAGGGTCCAAGGTAACATCCTGGTGCGCTaGGTTTTGACAGGATCTCCAACACATCCTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: LVMRVQGNILVR*VLTGSPTHPSP Trigger: AGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGGATGTTACCTTGGACCCTCATCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| 3UTR CCA 72 bp | GCTGGGAAACCCAGGCCAAAGGGCAGGGATCCAGACTaGCCATCTCATTGTACACTGTGTCATAATGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: AGKPRPKGRDPD*PSHCTLCHNVF Trigger: AAAAACATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGGGTTTCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| 3UTR GCA 72 bp | ATTCAACTGTATTCAAAACTTTCCTTGGGCACAGGCTaGCCAAGGCTGAGACTAGACATTCGAGTTACTAGT | + |
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Preference number: 3 (lower is better) Translates to: IQLYSKLSLGTG*PRLRLDIRVTS Trigger: ACTAGTAACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATACAGTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTATTCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATAGAAAAAGACTCCCATaGTTGACTGCTAAGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: TVFKTFLGHRLPKAETRHRKRLP*LTAKKH Trigger: ATGTTTCTTAGCAGTCAACAATGGGAGTCTTTTTCT...ATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| CDS-3UTR CCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCCGCACACCTGCGACCTaGCCGGCTGGAGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQARTPAT*PAGGGH Trigger: GTGGCCCCCTCCAGCCGGCCAGGTCGCAGGTGTGCG...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | GGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCGACGCGACGCACACCTaGGACCTGGCCGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GALLCYQATGHPLPEDDCDATHT*DLAGWR Trigger: CCTCCAGCCGGCCAGGTCGCAGGTGTGCGTCGCGTC...GCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCGACGCGACGCACACCTaGGACCTGGCCGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQADATHT*DLAGWR Trigger: CCTCCAGCCGGCCAGGTCGCAGGTGTGCGTCGCGTC...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGCGACCTGGCCGGCTaGAGGGGGCCACATTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: DRRSPPMLSGHWSSFARRCDLAG*RGPHCR Trigger: CCGGCAATGTGGCCCCCTCCAGCCGGCCAGGTCGCA...TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCGGGGGCGGCTGCGCTTaGTGGGACACCCTTCCGACG | + |
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Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPGGGCA*WDTLPT Trigger: CGTCGGAAGGGTGTCCCAGCAAGCGCAGCCGCCCCC...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATCGCACACCTGCGACCTaGCCGGCTGGAGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LITLGPCDQQAKLLLTPNRTPAT*PAGGGH Trigger: GTGGCCCCCTCCAGCCGGCCAGGTCGCAGGTGTGCG...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR GCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACGGGGGCGGCTGCGCTTaGTGGGACACCCTTCCGACG | + |
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Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDGGGCA*WDTLPT Trigger: CGTCGGAAGGGTGTCCCAGCAAGCGCAGCCGCCCCC...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGGAGGAGTGGGCAGGGTaGAGAGGGGACCCCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLEEWAG*RGDPLD Trigger: GTCCAAGGGGTCCCCTCTGCACCCTGCCCACTCCTC...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGCGGACTTTCAGACGCTaGGGGCTGCTGGCCCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RQTEPSYAIRPLVILCQKRTFRR*GLLAPR Trigger: TCGAGGGGCCAGCAGCCCCCAGCGTCTGAAAGTCCG...CTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCTGGACGGTCCGTCCCTaGTCCTGGCTGGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQAWTVRP*SWLVLP Trigger: TGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCA...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATTGCGACCTGGCCGGCTaGAGGGGGCCACATTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RPKGRDPDWPSHCTLCHNCDLAG*RGPHCR Trigger: CCGGCAATGTGGCCCCCTCCAGCCGGCCAGGTCGCA...ATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CCA 90 bp | AGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGGTTCTTCCCGGCTCCTaGACCGTCCTTCCCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: RQTEPSYAIRPLVILCQKVLPGS*TVLPHS Trigger: GGAGTGGGGAAGGACGGTCCAGGAGCCGGGAAGAAC...CTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCGACGTGCTGCCCCAGTaGTACTTGACCTTGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPDVLPQ*YLTLRR Trigger: GCGGCGCAAGGTCAAGTATCACTGGGGCAGCACGTC...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCGGCCTCACCCACACCTaGGCCCGAAGAGAGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPGLTHT*ARRERG Trigger: TCCTCTCTCTCTTCGGGCTCAGGTGTGGGTGAGGCC...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAGGCCTCACCCACACCTaGGCCCGAAGAGAGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAGLTHT*ARRERG Trigger: TCCTCTCTCTCTTCGGGCTCAGGTGTGGGTGAGGCC...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | AAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCAGGGATCGAGGAGTGGGCAGGGTaGAGAGGGGACCCCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: KEVTLFRLLGNPGQRAGIEEWAG*RGDPLD Trigger: GTCCAAGGGGTCCCCTCTGCACCCTGCCCACTCCTC...GATCCCTGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR GCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCTGGACGGTCCGTCCCTaGTCCTGGCTGGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTWTVRP*SWLVLP Trigger: TGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCA...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGGTCCGTCCCTGCTCCTaGCTGGTCCTTCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQVRPCS*LVLPPS Trigger: AGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGAC...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGAGTCCGTCCCTGCTCCTaGCTGGTCCTTCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DRRSPPMLSGHWSSFARRVRPCS*LVLPPS Trigger: AGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGAC...TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCGTTCTTCCCGGCTCCTaGACCGTCCTTCCCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTVLPGS*TVLPHS Trigger: GGAGTGGGGAAGGACGGTCCAGGAGCCGGGAAGAAC...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR TCA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATGACGTGCTGCCCCAGTaGTACTTGACCTTGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LITLGPCDQQAKLLLTPNDVLPQ*YLTLRR Trigger: GCGGCGCAAGGTCAAGTATCACTGGGGCAGCACGTC...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR GCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAAAGAGGAAGAGGAGGTaGGACGGCGGACTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAKRKRR*DGGLSS Trigger: GGAGCTCAGTCCGCCGTCGCACCTCCTCTTCCTCTT...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | GACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATCAGAAGATCCTGGCTaGTCTTCCCAGCCTGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: DRRSPPMLSGHWSSFARRSEDPG*SSQPVP Trigger: CGGCACAGGCTGGGAAGAGCAGCCAGGATCTTCTGA...TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCTTCACGGCAGTGAATaGCCAAGGGCTTCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGLHGSE*PRASSE Trigger: CTCTGAAGAAGCCCTTGGTCATTCACTGCCGTGAAG...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTTTGACTTCCCCAGGATaGCCTGGATGGCCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATLTSPG*PGWPSG Trigger: ACCTGAAGGCCATCCAGGGCATCCTGGGGAAGTCAA...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCCCTCCTCCTCCTCTGTaGTTCTGGAGAACCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQAPPPPL*FWRTEV Trigger: CACTTCGGTTCTCCAGAAGCACAGAGGAGGAGGAGG...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTACAGCCAGCTTCAGCTaGCTCTCAAACACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATTASFS*LSNTWC Trigger: GCACCAGGTGTTTGAGAGGCAGCTGAAGCTGGCTGT...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTCTTCTAGAGAGGAGTaGGCAGGGTGCAGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPSSREE*AGCRGD Trigger: GTCCCCTCTGCACCCTGCCCACTCCTCTCTAGAAGA...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATCTTCTAGAGAGGAGTaGGCAGGGTGCAGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPASSREE*AGCRGD Trigger: GTCCCCTCTGCACCCTGCCCACTCCTCTCTAGAAGA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCGTCCCTGCTCCTGGCTaGTCCTTCCACCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTVPAPG*SFHLLA Trigger: AGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGAC...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR CCA 90 bp | AACCCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCAGGCTCAGCTCTCTGTaGCTCCTTGGCAAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPGQRAGIQTGHLIVHCVRLSSL*LLGKEL Trigger: CAGCTCTTTGCCAAGGAGCCACAGAGAGCTGAGCCT...GACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATACTTGAGCCCTGGTCTTaGGGCCTGTCCTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGQRAGIQTGHLIVHCVILEPWS*GLSFFL Trigger: AAGGAAGAAGGACAGGCCTCAAGACCAGGGCTCAAG...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR TCA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCCTTGAGCCCTGGTCTTaGGGCCTGTCCTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCYQATGHPLPEDDCSCLEPWS*GLSFFL Trigger: AAGGAAGAAGGACAGGCCTCAAGACCAGGGCTCAAG...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGCTGCTTGGTCCTTCCTaGTTAGGACAGTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLLLGPS*LGQSPK Trigger: CTTGGGAGACTGTCCTAATCAGGAAGGACCAAGCAG...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCTGGGACTTGGAGGAGTaGACACTCAGAAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQAWDLEE*TLRRSW Trigger: CCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCA...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTGGGACTTGGAGGAGTaGACACTCAGAAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GALLCYQATGHPLPEDDCWDLEE*TLRRSW Trigger: CCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCA...GCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTTCTGGAGAACCGAAGTaGGTGGGAATTCTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGSGEPK*VGILEP Trigger: AGGTTCCAGAATTCCCACTCACTTCGGTTCTCCAGA...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | AGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGTGTTCTCTGGTGTGGTaGAGTGGTGTCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTEPSYAIRPLVILCQKCSLVW*SGVSSW Trigger: CCAAGAGGAGACACCACTTCACCACACCAGAGAACA...CTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATTCAGAAGATCCTGGCTaGTCTTCCCAGCCTGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LITLGPCDQQAKLLLTPNSEDPG*SSQPVP Trigger: CGGCACAGGCTGGGAAGAGCAGCCAGGATCTTCTGA...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR GCA 90 bp | GACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGACTAGGCCTTTGGAGATaGTCTGGGACTTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRRSPPMLSGHWSSFARRLGLWR*SGTWRS Trigger: ACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAG...TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAACAGCCAGCTTCAGCTaGCTCTCAAACACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPATASFS*LSNTWC Trigger: GCACCAGGTGTTTGAGAGGCAGCTGAAGCTGGCTGT...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCAGAGTAGGTCAGCACTaGTGTGAAGCCCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQARVGQH*CEAHGH Trigger: ATGTCCGTGGGCTTCACAGCAGTGCTGACCTACTCT...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | GACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGAAGAGTAGGTCAGCACTaGTGTGAAGCCCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DRRSPPMLSGHWSSFARRRVGQH*CEAHGH Trigger: ATGTCCGTGGGCTTCACAGCAGTGCTGACCTACTCT...TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGTCCCTGCTCCTGGCTaGTCCTTCCACCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTVPAPG*SFHLLA Trigger: AGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGAC...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGGCCTGTGCCGAGTCATaGTTGCTGGATCCCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLACAES*LLDPTN Trigger: ATTAGTGGGATCCAGCAACCATGACTCGGCACAGGC...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAAGGCTCAGCTCTCTGTaGCTCCTTGGCAAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPARLSSL*LLGKEL Trigger: CAGCTCTTTGCCAAGGAGCCACAGAGAGCTGAGCCT...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTTGCCTCTCAAACACCTaGTGCTGTTCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGCLSNT*CCSGTG Trigger: TCCAGTTCCTGAACAGCACCAGGTGTTTGAGAGGCA...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCTGCTTGGTCCTTCCTaGTTAGGACAGTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTLLGPS*LGQSPK Trigger: CTTGGGAGACTGTCCTAATCAGGAAGGACCAAGCAG...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR TCA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTGTTCTCTGGTGTGGTaGAGTGGTGTCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCYQATGHPLPEDDCSCCSLVW*SGVSSW Trigger: CCAAGAGGAGACACCACTTCACCACACCAGAGAACA...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCACTTCACGGCAGTGAATaGCCAAGGGCTTCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPALHGSE*PRASSE Trigger: CTCTGAAGAAGCCCTTGGTCATTCACTGCCGTGAAG...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAGTCCTTCCACCTTCTTaGTTGGTCCTTCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAVLPPS*LVLPPS Trigger: GGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGAC...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCTAGGCCTTTGGAGATaGTCTGGGACTTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTLGLWR*SGTWRS Trigger: ACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAG...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACACCTCCTCCTCCTCTGTaGTTCTGGAGAACCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTPPPPL*FWRTEV Trigger: CACTTCGGTTCTCCAGAAGCACAGAGGAGGAGGAGG...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCTCTCAAACACCTGGTaGTGTTCAGGAACTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGLSNTW*CSGTGV Trigger: TACTCCAGTTCCTGAACAGCACCAGGTGTTTGAGAG...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTCTTCTCCCTTCTTCTTaGGCATTGACTTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATLLPSS*ALTSPG Trigger: TCCTGGGGAAGTCAATGCCCAAGAAGAAGGGAGAAG...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCTTCCACCTTCTTGCTTaGTCCTTCCACCTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQAFHLLA*SFHLPA Trigger: AGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAA...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGTTCCACCTTCTTGCTTaGTCCTTCCACCTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQFHLLA*SFHLPA Trigger: AGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAA...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTTGTAACCTTTGCAGCTaGTCCCTCCTCAACGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATCNLCS*SLLNAL Trigger: AAGAGCGTTGAGGAGGGACCAGCTGCAAAGGTTACA...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCGCCTGTGCCGAGTCATaGTTGCTGGATCCCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCYQATGHPLPEDDCSCACAES*LLDPTN Trigger: ATTAGTGGGATCCAGCAACCATGACTCGGCACAGGC...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTGAGAACCGAAGTGAGTaGGAATTCTGGAACCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGENRSE*EFWNLP Trigger: AGGTAGGTTCCAGAATTCCCACTCACTTCGGTTCTC...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCTCTGGAGAACCGAAGTaGGTGGGAATTCTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTSGEPK*VGILEP Trigger: AGGTTCCAGAATTCCCACTCACTTCGGTTCTCCAGA...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACACTTCACGGCAGTGAATaGCCAAGGGCTTCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTLHGSE*PRASSE Trigger: CTCTGAAGAAGCCCTTGGTCATTCACTGCCGTGAAG...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | AGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATTTGACTTCCCCAGGATaGCCTGGATGGCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPKGRDPDWPSHCTLCHNLTSPG*PGWPSG Trigger: ACCTGAAGGCCATCCAGGGCATCCTGGGGAAGTCAA...ATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR GCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACGTCCTTCCACCTTCTTaGTTGGTCCTTCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDVLPPS*LVLPPS Trigger: GGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGAC...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCAGTAACTGTAACCTTTaGAGCTGGTCCCTCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQASNCNL*SWSLLN Trigger: GTTGAGGAGGGACCAGCTGCAAAGGTTACAGTTACT...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCCTTCTCCCTTCTTCTTaGGCATTGACTTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPLLPSS*ALTSPG Trigger: TCCTGGGGAAGTCAATGCCCAAGAAGAAGGGAGAAG...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTTTCCACCTTCCTGCTTaGTCCTTCCTGATTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATFHLPA*SFLIRT Trigger: TGTCCTAATCAGGAAGGACCAAGCAGGAAGGTGGAA...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATGTAACCTTTGCAGCTaGTCCCTCCTCAACGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPACNLCS*SLLNAL Trigger: AAGAGCGTTGAGGAGGGACCAGCTGCAAAGGTTACA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTACATTACACAGTCAGTaGGGAAGGAAGAGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTQTDGALLCYQATGTLHSQ*GRKRIL Trigger: CAGAATCCTCTTCCTTCCCCACTGACTGTGTAATGT...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCAGTGAGTGGGAATTCTaGAACCTACCTTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPSEWEF*NLPSWA Trigger: TGCCCAGGAAGGTAGGTTCCAGAATTCCCACTCACT...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGAGAACCGAAGTGAGTaGGAATTCTGGAACCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATENRSE*EFWNLP Trigger: AGGTAGGTTCCAGAATTCCCACTCACTTCGGTTCTC...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGTCTGGTGTGGTGAAGTaGTGTCTCCTCTTGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RQTEPSYAIRPLVILCQKSGVVK*CLLLEC Trigger: ACATTCCAAGAGGAGACACCACTTCACCACACCAGA...CTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGTCCTTGGCAAAGAGCTaGATGTGTGTTCTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLSLAKS*MCVLWC Trigger: ACACCAGAGAACACACATCCAGCTCTTTGCCAAGGA...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGTCCTTGGCAAAGAGCTaGATGTGTGTTCTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQSLAKS*MCVLWC Trigger: ACACCAGAGAACACACATCCAGCTCTTTGCCAAGGA...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATGCCTCTCAAACACCTaGTGCTGTTCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPACLSNT*CCSGTG Trigger: TCCAGTTCCTGAACAGCACCAGGTGTTTGAGAGGCA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGGCTACTATACAAATaGGGAGGGTACATTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATGLLYK*GGYITQ Trigger: CTGTGTAATGTACCCTCCTCATTTGTATAGTAGCCC...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGGGGCTACTATACAAATaGGGAGGGTACATTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQGLLYK*GGYITQ Trigger: CTGTGTAATGTACCCTCCTCATTTGTATAGTAGCCC...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | GTATTCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATTCGCTTCACGGCAGTGAATaGCCAAGGGCTTCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFKTFLGHRLPKAETRHSLHGSE*PRASSE Trigger: CTCTGAAGAAGCCCTTGGTCATTCACTGCCGTGAAG...CGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCAAAGTGACTCCTCTTTaGCCCTGGCAATCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTKVTPL*PWQSLE Trigger: TTCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTT...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCAAAGTGACTCCTCTTTaGCCCTGGCAATCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCYQATGHPLPEDDCSCKVTPL*PWQSLE Trigger: TTCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTT...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCAAGTAACTGTAACCTTTaGAGCTGGTCCCTCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPASNCNL*SWSLLN Trigger: GTTGAGGAGGGACCAGCTGCAAAGGTTACAGTTACT...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR GCA 90 bp | GTATTCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATTCGAGAGTAGGTCAGCACTaGTGTGAAGCCCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKTFLGHRLPKAETRHSRVGQH*CEAHGH Trigger: ATGTCCGTGGGCTTCACAGCAGTGCTGACCTACTCT...CGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| CDS-3UTR GCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTAGGGAGAAAGTAGGGTaGGTCTGTTTCCACAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATREKVG*VCFHND Trigger: ATCATTGTGGAAACAGACGCACCCTACTTTCTCCCT...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | GGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATGCCACTGGTCATCCTTTaGCAGAAGATGACTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRAGIQTGHLIVHCVIMPLVIL*QKMTAR Trigger: ACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGG...CATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153661.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATATTCCACCTTCCTGCTTaGTCCTTCCTGATTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGQRAGIQTGHLIVHCVIFHLPA*SFLIRT Trigger: TGTCCTAATCAGGAAGGACCAAGCAGGAAGGTGGAA...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CCA 90 bp | AACCCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCACATTACACAGTCAGTaGGGAAGGAAGAGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPGQRAGIQTGHLIVHCVTLHSQ*GRKRIL Trigger: CAGAATCCTCTTCCTTCCCCACTGACTGTGTAATGT...GACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CCA 90 bp | AGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGGGCATAGTCACACCATaGGCTACTATACAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTEPSYAIRPLVILCQKGIVTP*ATIQMR Trigger: CCTCATTTGTATAGTAGCCCATGGTGTGACTATGCC...CTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAAGTGAGTGGGAATTCTaGAACCTACCTTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTSEWEF*NLPSWA Trigger: TGCCCAGGAAGGTAGGTTCCAGAATTCCCACTCACT...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCAGGGATCAGTGGTGTCTCCTCTTaGAATGTCCTCTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVTLFRLLGNPGQRAGISGVSS*NVLFPF Trigger: GAAGGGGAAGAGGACATTCCAAGAGGAGACACCACT...GATCCCTGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR CCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACAGTGGTGTCTCCTCTTaGAATGTCCTCTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDSGVSS*NVLFPF Trigger: GAAGGGGAAGAGGACATTCCAAGAGGAGACACCACT...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATCTGGTGTGGTGAAGTaGTGTCTCCTCTTGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPASGVVK*CLLLEC Trigger: ACATTCCAAGAGGAGACACCACTTCACCACACCAGA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATGGATGTGTGTTCTCTaGTGTGGTGAAGTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAWMCVL*CGEVVS Trigger: AGACACCACTTCACCACACCAGAGAACACACATCCA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGGTGCTGTTCAGGAACTaGAGTAGTACACTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLVLFRN*SSTLVR Trigger: TCTCACAAGTGTACTACTCCAGTTCCTGAACAGCAC...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGGTGCTGTTCAGGAACTaGAGTAGTACACTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQVLFRN*SSTLVR Trigger: TCTCACAAGTGTACTACTCCAGTTCCTGAACAGCAC...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCAGAACTGACAGAGTGTaGGAAAGTGACTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: THPSPWTQTDGALLCYQARTDRV*ESDSSL Trigger: CAAAGAGGAGTCACTTTCCCACACTCTGTCAGTTCT...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | TGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTGAGAACTGACAGAGTGTaGGAAAGTGACTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYQATGHPLPEDDCSCSLRTDRV*ESDSSL Trigger: CAAAGAGGAGTCACTTTCCCACACTCTGTCAGTTCT...CAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR TCA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATAAAGTGACTCCTCTTTaGCCCTGGCAATCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LITLGPCDQQAKLLLTPNKVTPL*PWQSLE Trigger: TTCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTT...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| CDS-3UTR GCA 90 bp | AACCCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCACCCTCAGCTTCTGTTaGAAATTCAGAGTTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPGQRAGIQTGHLIVHCVTLSFC*KFRVRR Trigger: TCTACGAACTCTGAATTTGCAACAGAAGCTGAGGGT...GACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR GCA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTACCCTCAGCTTCTGTTaGAAATTCAGAGTTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPSPWTQTDGALLCYQATTLSFC*KFRVRR Trigger: TCTACGAACTCTGAATTTGCAACAGAAGCTGAGGGT...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR GCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACCTCTCAAACACCTGGTaGTGTTCAGGAACTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDLSNTW*CSGTGV Trigger: TACTCCAGTTCCTGAACAGCACCAGGTGTTTGAGAG...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCGGCATAGTCACACCATaGGCTACTATACAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCYQATGHPLPEDDCSCGIVTP*ATIQMR Trigger: CCTCATTTGTATAGTAGCCCATGGTGTGACTATGCC...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAAGATGCTCTGGGACTTaGAGGAGTGAACACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTRCSGT*RSEHSE Trigger: TTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCT...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACAGATGCTCTGGGACTTaGAGGAGTGAACACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDRCSGT*RSEHSE Trigger: TTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCT...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACATGGATGTGTGTTCTCTaGTGTGGTGAAGTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGALSFDRISNTSFTLDTWMCVL*CGEVVS Trigger: AGACACCACTTCACCACACCAGAGAACACACATCCA...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | GGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACAGACATGCTATCAGGCCACTaGTCATCCTTTGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GALSFDRISNTSFTLDTDMLSGH*SSFARR Trigger: TCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCAT...GTCTGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153661.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGTGTGACTCTTCTTTCTaGGAAACAGTAACTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQCDSSF*ETVTVT Trigger: GGTTACAGTTACTGTTTCTCAGAAAGAAGAGTCACA...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
||
| CDS-3UTR TCA 90 bp | TCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATTCGAGTTAAAGTGACTCCTCTTTaGCCCTGGCAATCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKLSLGTGCPRLRLDIRVKVTPL*PWQSLE Trigger: TTCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTT...AACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATCTCTCAAACACCTGGTaGTGTTCAGGAACTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPKGRDPDWPSHCTLCHNLSNTW*CSGTGV Trigger: TACTCCAGTTCCTGAACAGCACCAGGTGTTTGAGAG...ATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCAGGGATCAGGGAGAAAGTAGGGTaGGTCTGTTTCCACAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEVTLFRLLGNPGQRAGIREKVG*VCFHND Trigger: ATCATTGTGGAAACAGACGCACCCTACTTTCTCCCT...GATCCCTGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCAGGGATCAGAACTGACAGAGTGTaGGAAAGTGACTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEVTLFRLLGNPGQRAGIRTDRV*ESDSSL Trigger: CAAAGAGGAGTCACTTTCCCACACTCTGTCAGTTCT...GATCCCTGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATAATGTTTTCCATAGCATCACTCTaGCCCTCAGCTTCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRAGIQTGHLIVHCVIMFSIASL*PSASVA Trigger: TGCAACAGAAGCTGAGGGTCAGAGTGATGCTATGGA...AAACATTATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCTGTGACTCTTCTTTCTaGGAAACAGTAACTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: CSLITLGPCDQQAKLLLTCDSSF*ETVTVT Trigger: GGTTACAGTTACTGTTTCTCAGAAAGAAGAGTCACA...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTGCCCAAGGCTGAGACTAGACATTCGAGTTACTAGTTTACACCAGAGAAGGGAGAAAGTAGGGTaGGTCTGTTTCCACAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGCPRLRLDIRVTSLHQRREKVG*VCFHND Trigger: ATCATTGTGGAAACAGACGCACCCTACTTTCTCCCT...TCTCTGGTGTAAACTAGTAACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
||
| CDS-3UTR GCA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCGTGCTTTTGAATATCTaGATGAGAGTCAGAGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: YAIRPLVILCQKMTARAPVLLNI*MRVRVI Trigger: GATAACTCTGACTCTCATGCAGATATTCAAAAGCAC...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204753.3 |
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| CDS-3UTR CCA 90 bp | ACAGGCTGCCCAAGGCTGAGACTAGACATTCGAGTTACTAGTTTACACCAGAGAAGAACTGACAGAGTGTaGGAAAGTGACTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGCPRLRLDIRVTSLHQRRTDRV*ESDSSL Trigger: CAAAGAGGAGTCACTTTCCCACACTCTGTCAGTTCT...TCTCTGGTGTAAACTAGTAACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| CDS-3UTR TCA 90 bp | TCAGATAAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCATGTGTGCTTCGTATGTaGCTCTTCTTTCTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDKEVTLFRLLGNPGQRACVLRM*LFFLRN Trigger: GTTTCTCAGAAAGAAGAGTCACATACGAAGCACACA...TGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTTATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| 3UTR CAA 72 bp | TTAAGATCTCCTATTCAACTGTATTCAAAACTTTCCTaGGGCACAGGCTGCCCAAGGCTGAGACTAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPIQLYSKLS*GTGCPRLRLDI Trigger: AATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGAATACAGTTGAATAGGAGATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| CDS CCA 90 bp | GGACCGTCCTTCCCCACTCCTGGACGGTCCGTCCCTGCTCCTGGCTaGTCCTTCCACCTTCTTGCTTGGTCCTTCCACCTTCCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSFPTPGRSVPAPG*SFHLLAWSFHLPAW Trigger: CCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCAGGAGTGGGGAAGGACGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | TCCTGGACCGTCCTTCCCCACTCCTGGACGGTCCGTCCCTGCTCCTaGCTGGTCCTTCCACCTTCTTGCTTGGTCCTTCCACCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SWTVLPHSWTVRPCS*LVLPPSCLVLPPSC Trigger: GCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCAGGAGTGGGGAAGGACGGTCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | GGACGGTCCGTCCCTGCTCCTGGCTGGTCCTTCCACCTTCTTGCTTaGTCCTTCCACCTTCCTGCTTGGTCCTTCCTGATTAGGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSVPAPGWSFHLLA*SFHLPAWSFLIRTV Trigger: GACTGTCCTAATCAGGAAGGACCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | GGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCGACAGTCTCCCAAGCTaGCCTTCCCCTGAGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GALLCYQATGHPLPEDDCDSLPS*PSPEWW Trigger: CCACCACTCAGGGGAAGGCAAGCTTGGGAGACTGTC...GCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | GGCTGGTCCTTCCACCTTCTTGCTTGGTCCTTCCACCTTCCTGCTTaGTCCTTCCTGATTAGGACAGTCTCCCAAGCTTGCCTTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWSFHLLAWSFHLPA*SFLIRTVSQACLPL Trigger: CAGGGGAAGGCAAGCTTGGGAGACTGTCCTAATCAGGAAGGACCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGGTCTTCCACCTTCTTGCTaGGTCCTTCCACCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPWTQTDGALLCYQATGLPPSC*VLPPSC Trigger: GCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAG...ACCAGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS GCA 90 bp | CACCTTCCTGCTTGGTCCTTCCTGATTAGGACAGTCTCCCAAGCTTaGCTTCCCCTGAGTGGTGGCAGCTTCTCCCTTCTTCTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLPAWSFLIRTVSQA*LPLSGGSFSLLLGH Trigger: ATGCCCAAGAAGAAGGGAGAAGCTGCCACCACTCAGGGGAAGGCAAGCTTGGGAGACTGTCCTAATCAGGAAGGACCAAGCAGGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS GCA 90 bp | AGATGCTCTGGGACTTGGAGGAGTGAACACTCAGAAGATCCTGGCTaGTCTTCCCAGCCTGTGCCGAGTCATGGTTGCTGGATCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: RCSGTWRSEHSEDPG*SSQPVPSHGCWIPL Trigger: TAGTGGGATCCAGCAACCATGACTCGGCACAGGCTGGGAAGAGCAGCCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | AGCCCTCTTCCAGGCTCAGCTCTCTGTGGCTCCTTGGCAAAGAGCTaGATGTGTGTTCTCTGGTGTGGTGAAGTGGTGTCTCCTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPLPGSALCGSLAKS*MCVLWCGEVVSPLG Trigger: TCCAAGAGGAGACACCACTTCACCACACCAGAGAACACACATCCAGCTCTTTGCCAAGGAGCCACAGAGAGCTGAGCCTGGAAGAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | GCAAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCCTTCTTCTTGGGCATaGACTTCCCCAGGATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKLLLTPNPFHSTHPPTQPSSWA*TSPGCP Trigger: AGGGCATCCTGGGGAAGTCAATGCCCAAGAAGAAGG...CTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCACTGCTCTCTGTGGCTCCTaGGCAAAGAGCTGGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HPSPWTQTDGALLCYQATALCGS*AKSWMC Trigger: ACACATCCAGCTCTTTGCCAAGGAGCCACAGAGAGC...AGTGGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | TACCTTCCTGGGCAATGTCTAGGCCTTTGGAGATGCTCTGGGACTTaGAGGAGTGAACACTCAGAAGATCCTGGCTGCTCTTCCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLPGQCLGLWRCSGT*RSEHSEDPGCSSQP Trigger: AGGCTGGGAAGAGCAGCCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAGACATTGCCCAGGAAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | ACACATCCTTCACCTTGGACACAGACAGACGGAGCCCTCCTATGCTATCAGGCCTCAGGTAGATCATTCTaGAGCCCTGGTCTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: THPSPWTQTDGALLCYQASGRSF*SPGLEA Trigger: GGCCTCAAGACCAGGGCTCAAGAATGATCTACCTGA...GGCCTGATAGCATAGGAGGGCTCCGTCTGTCTGTGTCCAAGGTGAAGGATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CCAGGCCAAAGGGCAGGGATCCAGACTGGCCATCTCATTGTACACTGTGTCATACCTTCTTCTTGGGCATaGACTTCCCCAGGATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGQRAGIQTGHLIVHCVIPSSWA*TSPGCP Trigger: AGGGCATCCTGGGGAAGTCAATGCCCAAGAAGAAGG...TATGACACAGTGTACAATGAGATGGCCAGTCTGGATCCCTGCCCTTTGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CAA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCGCTTCTCCCTTCTTCTaGGGCATTGACTTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCYQATGHPLPEDDCSCASPFF*GIDFPR Trigger: CCTGGGGAAGTCAATGCCCAAGAAGAAGGGAGAAGC...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCGGTCCTTCCACCTTCTaGCTTGGTCCTTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLITLGPCDQQAKLLLTGPSTF*LGPSTF Trigger: GAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACC...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CAA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCGGTCCTTCCACCTTCTaGCTTGGTCCTTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCYQATGHPLPEDDCSCGPSTF*LGPSTF Trigger: GAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACC...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCGCCACTGGTCATCCTTaGCCAGAAGATGACTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSLITLGPCDQQAKLLLTATGHP*PEDDCS Trigger: CGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGC...GGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153661.2 |
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| CDS-3UTR CAA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCATCAGGTAGATCATTCTaGAGCCCTGGTCTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTTPHPKSIPQYPPTHPASGRSF*SPGLEA Trigger: GGCCTCAAGACCAGGGCTCAAGAATGATCTACCTGA...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | TCAGATAAAGAGGTGACTTTATTCAGACTGCTGGGAAACCCAGGCCAAAGGGCAGACAGTCTCCCAAGCTaGCCTTCCCCTGAGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDKEVTLFRLLGNPGQRADSLPS*PSPEWW Trigger: CCACCACTCAGGGGAAGGCAAGCTTGGGAGACTGTC...TGCCCTTTGGCCTGGGTTTCCCAGCAGTCTGAATAAAGTCACCTCTTTATCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CAA 90 bp | CCTGGTGCGCTGAGTTTTGACAGGATCTCCAACACATCCTTCACCTTGGACACACTTCCACCTTCTTGCTaGGTCCTTCCACCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGALSFDRISNTSFTLDTLPPSC*VLPPSC Trigger: GCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAG...TGTGTCCAAGGTGAAGGATGTGTTGGAGATCCTGTCAAAACTCAGCGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATGCTCTCTGTGGCTCCTaGGCAAAGAGCTGGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LITLGPCDQQAKLLLTPNALCGS*AKSWMC Trigger: ACACATCCAGCTCTTTGCCAAGGAGCCACAGAGAGC...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS-3UTR CAA 90 bp | GGAGCCCTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCCATCAGTCAGTGTCCTaGGATCACAGAAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GALLCYQATGHPLPEDDCHQSVS*DHRSQR Trigger: TCTCTGACTTCTGTGATCCAAGGACACTGACTGATG...GCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAGGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | TATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCGAAAGTGACTCCTCTTaGACCCTGGCAATCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: YAIRPLVILCQKMTARAPESDSS*TLAISR Trigger: TCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTTC...GGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CTCCTATGCTATCAGGCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTGCGAAAGTGACTCCTCTTaGACCCTGGCAATCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLCYQATGHPLPEDDCSCESDSS*TLAISR Trigger: TCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTTC...GCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGCCTGATAGCATAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS CCA 90 bp | AGTGGGAATTCTGGAACCTACCTTCCTGGGCAATGTCTAGGCCTTTaGAGATGCTCTGGGACTTGGAGGAGTGAACACTCAGAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGNSGTYLPGQCLGL*RCSGTWRSEHSEDP Trigger: AGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAGACATTGCCCAGGAAGGTAGGTTCCAGAATTCCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | AAAACTACTCCTCACCCCAAATCCATTCCACAGTACCCACCCACCCACCCAGCACATCAGTCAGTGTCCTaGGATCACAGAAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTTPHPKSIPQYPPTHPAHQSVS*DHRSQR Trigger: TCTCTGACTTCTGTGATCCAAGGACACTGACTGATG...TGCTGGGTGGGTGGGTGGGTACTGTGGAATGGATTTGGGGTGAGGAGTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000204753.3 |
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| CDS-3UTR CAA 90 bp | CTGATTACCCTAGGGCCTTGTGACCAGCAGGCAAAACTACTCCTCACCCCAAATGAAAGTGACTCCTCTTaGACCCTGGCAATCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LITLGPCDQQAKLLLTPNESDSS*TLAISR Trigger: TCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTTC...ATTTGGGGTGAGGAGTAGTTTTGCCTGCTGGTCACAAGGCCCTAGGGTAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089018.11 ENSMUST00000153661.2 |
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| CDS-3UTR CAA 90 bp | TCAAAACTTTCCTTGGGCACAGGCTGCCCAAGGCTGAGACTAGACATTCGAGTTGAAAGTGACTCCTCTTaGACCCTGGCAATCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SKLSLGTGCPRLRLDIRVESDSS*TLAISR Trigger: TCGAGAGATTGCCAGGGTCAAAGAGGAGTCACTTTC...AACTCGAATGTCTAGTCTCAGCCTTGGGCAGCCTGTGCCCAAGGAAAGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138420.2 |
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| CDS TCA 90 bp | ATCACCACCTCTCTGTCTGTGTGCTTCGTATGTGACTCTTCTTTCTaGGAAACAGTAACTGTAACCTTTGCAGCTGGTCCCTCCTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: ITTSLSVCFVCDSSF*ETVTVTFAAGPSST Trigger: CGTTGAGGAGGGACCAGCTGCAAAGGTTACAGTTACTGTTTCTCAGAAAGAAGAGTCACATACGAAGCACACAGACAGAGAGGTGGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089018.11 |
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| CDS GCA 72 bp | GGGCCACATTGCCGGGCTCCCGGGGGCGGCTGCGCTTaGTGGGACACCCTTCCGACGTGCTGCCCCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GPHCRAPGGGCA*WDTLPTCCPSD Trigger: ATCACTGGGGCAGCACGTCGGAAGGGTGTCCCAGCAAGCGCAGCCGCCCCCGGGAGCCCGGCAATGTGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS TCA 72 bp | GGACGAAGAAGAGGAAGAGGAGGTGCGACGGCGGACTaGGCTCCGAGGAGCGCGGGCCACATCGTCCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRRRGRGGATAD*APRSAGHIVPA Trigger: CGCGGGGACGATGTGGCCCGCGCTCCTCGGAGCTCAGTCCGCCGTCGCACCTCCTCTTCCTCTTCTTCGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 72 bp | GTTCTTCCCGGCTCCTGGACCGTCCTTCCCCACTCCTaGACGGTCCGTCCCTGCTCCTGGCTGGTCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPGSWTVLPHS*TVRPCSWLVLP Trigger: TGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCAGGAGTGGGGAAGGACGGTCCAGGAGCCGGGAAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 72 bp | GTCCTTCCCCACTCCTGGACGGTCCGTCCCTGCTCCTaGCTGGTCCTTCCACCTTCTTGCTTGGTCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPHSWTVRPCS*LVLPPSCLVLP Trigger: TGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCAGGAGTGGGGAAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CCA 72 bp | TTCCCCACTCCTGGACGGTCCGTCCCTGCTCCTGGCTaGTCCTTCCACCTTCTTGCTTGGTCCTTCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPTPGRSVPAPG*SFHLLAWSFHL Trigger: AAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACGGACCGTCCAGGAGTGGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS GCA 72 bp | GGGACTTGGAGGAGTGAACACTCAGAAGATCCTGGCTaGTCTTCCCAGCCTGTGCCGAGTCATGGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTWRSEHSEDPG*SSQPVPSHGCW Trigger: CCAGCAACCATGACTCGGCACAGGCTGGGAAGAGCAGCCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS CAA 72 bp | CGTCCCTGCTCCTGGCTGGTCCTTCCACCTTCTTGCTaGGTCCTTCCACCTTCCTGCTTGGTCCTTCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RPCSWLVLPPSC*VLPPSCLVLPD Trigger: ATCAGGAAGGACCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
||
| CDS CCA 72 bp | GTCCCTGCTCCTGGCTGGTCCTTCCACCTTCTTGCTTaGTCCTTCCACCTTCCTGCTTGGTCCTTCCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VPAPGWSFHLLA*SFHLPAWSFLI Trigger: AATCAGGAAGGACCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAAGGACCAGCCAGGAGCAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
||
| CDS TCA 72 bp | TCTAGGCCTTTGGAGATGCTCTGGGACTTGGAGGAGTaGACACTCAGAAGATCCTGGCTGCTCTTCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRPLEMLWDLEE*TLRRSWLLFPA Trigger: GGCTGGGAAGAGCAGCCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
||
| CDS CCA 72 bp | GGCTGCTCTTCCCAGCCTGTGCCGAGTCATGGTTGCTaGATCCCACTAATGGATAACCAGGTGTCTTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSQPVPSHGC*IPLMDNQVSYG Trigger: GCCATAAGACACCTGGTTATCCATTAGTGGGATCCAGCAACCATGACTCGGCACAGGCTGGGAAGAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
||
| CDS CCA 72 bp | CCAGGCTCAGCTCTCTGTGGCTCCTTGGCAAAGAGCTaGATGTGTGTTCTCTGGTGTGGTGAAGTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSALCGSLAKS*MCVLWCGEVVS Trigger: AGACACCACTTCACCACACCAGAGAACACACATCCAGCTCTTTGCCAAGGAGCCACAGAGAGCTGAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
||
| CDS GCA 72 bp | CCTGGCTGCTCTTCCCAGCCTGTGCCGAGTCATGGTTaGTGGATCCCACTAATGGATAACCAGGTGTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PGCSSQPVPSHG*WIPLMDNQVSY Trigger: ATAAGACACCTGGTTATCCATTAGTGGGATCCAGCAACCATGACTCGGCACAGGCTGGGAAGAGCAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS GCA 72 bp | ACCAAGGGCTTCTTCAGAGACACAGCCAGCTTCAGCTaGCTCTCAAACACCTGGTGCTGTTCAGGAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: TKGFFRDTASFS*LSNTWCCSGTG Trigger: TCCAGTTCCTGAACAGCACCAGGTGTTTGAGAGGCAGCTGAAGCTGGCTGTGTCTCTGAAGAAGCCCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| CDS GCA 72 bp | AAGACTTCTCGGCACCTGGCGAGGGAGAAAGTAGGGTaGGTCTGTTTCCACAATGATCCTCTCCAACGGGAT | + |
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Preference number: 6 (lower is better) Translates to: KTSRHLAREKVG*VCFHNDPLQRD Trigger: ATCCCGTTGGAGAGGATCATTGTGGAAACAGACGCACCCTACTTTCTCCCTCGCCAGGTGCCGAGAAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000138420.2 ENSMUST00000204753.3 |
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| CDS CCA 72 bp | GGGCAATGTCTAGGCCTTTGGAGATGCTCTGGGACTTaGAGGAGTGAACACTCAGAAGATCCTGGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQCLGLWRCSGT*RSEHSEDPGCS Trigger: AGAGCAGCCAGGATCTTCTGAGTGTTCACTCCTCCAAGTCCCAGAGCATCTCCAAAGGCCTAGACATTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS GCA 72 bp | GCCACTGGTCATCCTTTGCCAGAAGATGACTGCTCGTaGTCCCTGCTCAAAGACTGTAGAGGCGACAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: ATGHPLPEDDCS*SLLKDCRGDKY Trigger: ATACTTGTCGCCTCTACAGTCTTTGAGCAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGACCAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153661.2 |
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| CDS CCA 72 bp | TTCCACCTTCTTGCTTGGTCCTTCCACCTTCCTGCTTaGTCCTTCCTGATTAGGACAGTCTCCCAAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FHLLAWSFHLPA*SFLIRTVSQAC Trigger: GCAAGCTTGGGAGACTGTCCTAATCAGGAAGGACCAAGCAGGAAGGTGGAAGGACCAAGCAAGAAGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS GCA 72 bp | GTCATCCTTTGCCAGAAGATGACTGCTCGTGCTCCCTaGTCAAAGACTGTAGAGGCGACAAGTATTCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: VILCQKMTARAP*SKTVEATSILS Trigger: CGAGAGAATACTTGTCGCCTCTACAGTCTTTGAGCAGGGAGCACGAGCAGTCATCTTCTGGCAAAGGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153661.2 |
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| CDS CCA 72 bp | CAAAGAGCTGGATGTGTGTTCTCTGGTGTGGTGAAGTaGTGTCTCCTCTTGGAATGTCCTCTTCCCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QRAGCVFSGVVK*CLLLECPLPLH Trigger: GTGAAGGGGAAGAGGACATTCCAAGAGGAGACACCACTTCACCACACCAGAGAACACACATCCAGCTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS TCA 72 bp | TGCTCCTGTCTAGCGCAGACGCTTCCTTCTCCACACTaGCCTTCGTATGTGACTCTTCTTTCTGAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: CSCLAQTLPSPH*PSYVTLLSEKQ Trigger: CTGTTTCTCAGAAAGAAGAGTCACATACGAAGGTCAGTGTGGAGAAGGAAGCGTCTGCGCTAGACAGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS TCA 72 bp | ATGATATCCAACAAATCTTCATCAGCTTCACGGCAGTaGATGACCAAGGGCTTCTTCAGAGACACAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MISNKSSSASRQ*MTKGFFRDTAS Trigger: GCTGGCTGTGTCTCTGAAGAAGCCCTTGGTCATTCACTGCCGTGAAGCTGATGAAGATTTGTTGGATATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089018.11 ENSMUST00000113022.8 ENSMUST00000138420.2 ENSMUST00000153661.2 ENSMUST00000204753.3 |
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| CDS TCA 72 bp | TTCTCCACACTGACCTTCGTATGTGACTCTTCTTTCTaGGAAACAGTAACTGTAACCTTTGCAGCTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FSTLTFVCDSSF*ETVTVTFAAGP Trigger: GGGACCAGCTGCAAAGGTTACAGTTACTGTTTCTCAGAAAGAAGAGTCACATACGAAGGTCAGTGTGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113022.8 ENSMUST00000204753.3 |
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| CDS TCA 72 bp | CGCAGACGCTTCCTTCTCCACACTGACCTTCGTATGTaGCTCTTCTTTCTGAGAAACAGTAACTGTAACCTT | + |
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Preference number: 6 (lower is better) Translates to: RRRFLLHTDLRM*LFFLRNSNCNL Trigger: AAGGTTACAGTTACTGTTTCTCAGAAAGAAGAGTCACATACGAAGGTCAGTGTGGAGAAGGAAGCGTCTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113022.8 ENSMUST00000204753.3 |
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