Pregenerated sensors for TAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001670Ensembl transcript IDs: ENSMUST00000001720.14, ENSMUST00000143741.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACTCCTGTGTCAGCTCGAGGAAATGGTGGGGGAGGCAACCTTCTaGTTCTCTCATCCTGAGCTCTGGCTTTTCCCATCCCAGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: TLLCQLEEMVGEATF*FSHPELWLFPSQLP Trigger: AGGAAGCTGGGATGGGAAAAGCCAGAGCTCAGGATGAGAGAAGCAGAAGGTTGCCTCCCCCACCATTTCCTCGAGCTGACACAGGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CCA 90 bp | AAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTaGAGAGGCCTCCTGTCCCTTCTTTCTCCTTCAATGAGGTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: KKVRRKMLSGPQQCL*RGLLSLLSPSMRCA Trigger: AGCACACCTCATTGAAGGAGAAAGAAGGGACAGGAGGCCTCTCCAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CCA 90 bp | ATCCTGAGCTCTGGCTTTTCCCATCCCAGCTTCCTTCTGGTAAACTaGTACCCTCAGGATAAAGAAGTATATGGTGCCTGCCTGCGTGCG | + |
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Preference number: 1 (lower is better) Translates to: ILSSGFSHPSFLLVN*YPQDKEVYGACLRA Trigger: CGCACGCAGGCAGGCACCATATACTTCTTTATCCTGAGGGTACCAGTTTACCAGAAGGAAGCTGGGATGGGAAAAGCCAGAGCTCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR TCA 90 bp | ATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTGCAGCCCAACTCTCCTTaGGTGGGACATGTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ILQEGEEEDAFRSAAMSLQPNSP*VGHVFR Trigger: CCTGAAGACATGTCCCACTCAAGGAGAGTTGGGCTG...CAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR CCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTAGCTCGAGGAAATGGTaGGGGAGGCAACCTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: MILQEGEEEDAFRSAAMSSSRKW*GRQPSA Trigger: AGCAGAAGGTTGCCTCCCCCACCATTTCCTCGAGCT...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CAA 90 bp | CATGTGTTGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTaGATGCGGTGCTTTGGAGGTCCCTCTCGAAGAAGGGACATCTGT | + |
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Preference number: 2 (lower is better) Translates to: HVLDVTGGRRNNLQI*MRCFGGPSRRRDIC Trigger: ACAGATGTCCCTTCTTCGAGAGGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CAA 90 bp | CCAGCAGAGCCGAATAATGGGAGAATCTGGGGTTCCAGGCATGTGTaGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: PAEPNNGRIWGSRHV*DVTGGRRNNLQILM Trigger: CATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATGCCTGGAACCCCAGATTCTCCCATTATTCGGCTCTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR CCA 90 bp | AGGCATGTGTTGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCCAACTCTCCTTGAGTaGGACATGTCTTCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RHVLDVTGGRRNNLQILMPTLLE*DMSSGG Trigger: TCCTCCTGAAGACATGTCCCACTCAAGGAGAGTTGG...CATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGAGGTATTGCTGAAGTaGGGCAGGAACCAAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: MRCAPILRKPDTSRSNQFEVLLK*GRNQGD Trigger: GTCACCTTGGTTCCTGCCTCACTTCAGCAATACCTC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTTCTCATCCTGAGCTCTaGCTTTTCCCATCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: MRCAPILRKPDTSRSNQFSHPEL*LFPSQL Trigger: AAGCTGGGATGGGAAAAGCCAGAGCTCAGGATGAGA...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTAATAATGGGAGAATCTaGGGTTCCAGGCATGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: MRCAPILRKPDTSRSNQFNNGRI*GSRHVL Trigger: CAACACATGCCTGGAACCCCAGATTCTCCCATTATT...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR TCA 72 bp | TCTGGTGTAGCTCTACCGCAGGGCGTGAGGTATTGCTaGAGTGAGGCAGGAACCAAGGTGACTTCCGACCTG | + |
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Preference number: 3 (lower is better) Translates to: SGVALPQGVRYC*SEAGTKVTSDL Trigger: CAGGTCGGAAGTCACCTTGGTTCCTGCCTCACTTCAGCAATACCTCACGCCCTGCGGTAGAGCTACACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CCA 72 bp | TCTGGCTTTTCCCATCCCAGCTTCCTTCTGGTAAACTaGTACCCTCAGGATAAAGAAGTATATGGTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SGFSHPSFLLVN*YPQDKEVYGAC Trigger: GCAGGCACCATATACTTCTTTATCCTGAGGGTACCAGTTTACCAGAAGGAAGCTGGGATGGGAAAAGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR GCA 72 bp | GGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTaGTTTGGAGGTCCCTCTCGAAGAAGGGACATCTGT | + |
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Preference number: 3 (lower is better) Translates to: GGRRNNLQILMR*FGGPSRRRDIC Trigger: ACAGATGTCCCTTCTTCGAGAGGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | TCGAGGAAATGGTGGGGGAGGCAACCTTCTGCTTCTCTCATCCTGAGCTCTGGCCTCGAAGCACGTGGCTaGGAGGCAGTGGACAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SRKWWGRQPSASLILSSGLEARG*EAVDRL Trigger: CAGTCTGTCCACTGCCTCCCAGCCACGTGCTTCGAG...GCCAGAGCTCAGGATGAGAGAAGCAGAAGGTTGCCTCCCCCACCATTTCCTCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR TCA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCGGGCCCAGGATCCGCTaGCTCAGCTTCACCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TGGRRNNLQILMRCFGGPGPRIR*LSFTSP Trigger: CGGGCTGGTGAAGCTGAGTCAGCGGATCCTGGGCCC...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR GCA 90 bp | TCGAGGAAATGGTGGGGGAGGCAACCTTCTGCTTCTCTCATCCTGAGCTCTGGCAGGCAGTGGACAGACTaGTCCGCAATTAACCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRKWWGRQPSASLILSSGRQWTD*SAINRS Trigger: AGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCT...GCCAGAGCTCAGGATGAGAGAAGCAGAAGGTTGCCTCCCCCACCATTTCCTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTGGCCTCACATTCCACCTaGCCTTCCTGCCCTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILQEGEEEDAFRSAAMSLASHST*PSCPSL Trigger: GAGCGAAGGGCAGGAAGGCCAGGTGGAATGTGAGGC...CAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTGATGGGCGGACTGGCTaGAGTCCAGGAATGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: MILQEGEEEDAFRSAAMSDGRTG*SPGMAD Trigger: GTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATC...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR TCA 90 bp | TCGAGGAAATGGTGGGGGAGGCAACCTTCTGCTTCTCTCATCCTGAGCTCTGGCTGGCTCGGATGGGATTaGAGGTTTTATTGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: SRKWWGRQPSASLILSSGWLGWD*RFYWTC Trigger: ACATGTCCAATAAAACCTTCAATCCCATCCGAGCCA...GCCAGAGCTCAGGATGAGAGAAGCAGAAGGTTGCCTCCCCCACCATTTCCTCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR GCA 90 bp | ATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTGCACACTCCTCCTGGCTaGCTTCAGCACAGTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ILQEGEEEDAFRSAAMSLHTPPG*LQHSGS Trigger: ACTACCACTGTGCTGAAGGCAGCCAGGAGGAGTGTG...CAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTGTGGCTGGGAGGCAGTaGACAGACTGCTCCGCAATT | + |
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Preference number: 4 (lower is better) Translates to: MILQEGEEEDAFRSAAMSVAGRQ*TDCSAI Trigger: AATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCAC...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCGGTACTCGAAGCACGTaGCTGGGAGGCAGTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: TGGRRNNLQILMRCFGGPGTRST*LGGSGQ Trigger: CTGTCCACTGCCTCCCAGCCACGTGCTTCGAGTACC...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR TCA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCCACAGCTCAATGGCCTaGCTGCAGCCACTCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TGGRRNNLQILMRCFGGPHSSMA*LQPLVR Trigger: TCTGACGAGTGGCTGCAGTCAGGCCATTGAGCTGTG...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTTCACTTCAGGGTCTGTaGGCAGGTTCCCAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: MILQEGEEEDAFRSAAMSSLQGL*AGSQTQ Trigger: CTGTGTTTGGGAACCTGCCCACAGACCCTGAAGTGA...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | AGGCATGTGTTGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGGAACCAGCCAGCGCTTaGCCAGCCCACCACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RHVLDVTGGRRNNLQILMEPASA*PAHHRT Trigger: TGTCCTGTGGTGGGCTGGCCAAGCGCTGGCTGGTTC...CATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCGCATCCTTCATGGCTTaGGTCACTTCAGGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TGGRRNNLQILMRCFGGPASFMA*VTSGSV Trigger: CACAGACCCTGAAGTGACCCAAGCCATGAAGGATGC...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTTGTTCTGTCCAGGATTaGCCAACACGGCTAGACACA | + |
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Preference number: 4 (lower is better) Translates to: MILQEGEEEDAFRSAAMSCSVQD*PTRLDT Trigger: TGTGTCTAGCCGTGTTGGCCAATCCTGGACAGAACA...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| 3UTR CAA 72 bp | GATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTaGATGCGGTGCTTTGGAGGTCCCTCTCGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DVTGGRRNNLQI*MRCFGGPSRRR Trigger: CCTTCTTCGAGAGGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR TCA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCAATTAACCGCTCTGTaGATTCCACGTCATTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: MILQEGEEEDAFRSAAMSQLTAL*IPRHSQ Trigger: TTGAGAATGACGTGGAATTCACAGAGCGGTTAATTG...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR GCA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCTTGCCTTTCAGCCACTaGCAAAATCTTCTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGGRRNNLQILMRCFGGPLPFSH*QNLLKV Trigger: CACCTTCAGAAGATTTTGGCAGTGGCTGAAAGGCAA...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGTACATGGCTCCAGATaGGCGGACTGGCTGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: MRCAPILRKPDTSRSNQFVHGSR*ADWLES Trigger: GGACTCCAGCCAGTCCGCCCATCTGGAGCCATGTAC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGCTGGAGTCCAGGAATaGCAGACAACGCCCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: MRCAPILRKPDTSRSNQFAGVQE*QTTPHS Trigger: GCTATGGGGCGTTGTCTGCCATTCCTGGACTCCAGC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | AGGCATGTGTTGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGATGTCTCTTCGATCATaGATAAGGATCCAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RHVLDVTGGRRNNLQILMMSLRS*IRIQPS Trigger: GCTGGGCTGGATCCTTATCCATGATCGAAGAGACAT...CATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR GCA 90 bp | AGGCATGTGTTGGATGTGACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGTCAAATTCTGGGAAGTaGTCCATCTCAATTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RHVLDVTGGRRNNLQILMSNSGK*SISIPT Trigger: GGTGGGAATTGAGATGGAGCACTTCCCAGAATTTGA...CATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGTCACATCCAACACATGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR GCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTCGTCCCGAATCTCATTaGCAAAAATGTCTCTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: MRCAPILRKPDTSRSNQFRPESH*QKCLFD Trigger: ATCGAAGAGACATTTTTGGCAATGAGATTCGGGACG...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CCA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGTCATTCTCAAATTCTaGGAAGTGCTCCATCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: MRCAPILRKPDTSRSNQFVILKF*EVLHLN Trigger: ATTGAGATGGAGCACTTCCCAGAATTTGAGAATGAC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 90 bp | CCTGAGGGGTGCGCTGAAGGATGCTCTTCAGGGCACCTTGGACGATaGTGCACGGGCCCAGGATCCGCTGACTCAGCTTCACCAGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PEGCAEGCSSGHLGR*CTGPGSADSASPAR Trigger: ACGGGCTGGTGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGCCCTGAAGAGCATCCTTCAGCGCACCCCTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS GCA 90 bp | GAGGGCCTCACATTCCACCTGGCCTTCCTGCCCTTCGCTCTCCCTTaGACCGAGCTTCTCCCGCCAATATTGACGCGAACATCCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: EGLTFHLAFLPFALP*TELLPPILTRTSST Trigger: AGTGCTGGATGTTCGCGTCAATATTGGCGGGAGAAGCTCGGTGCAAGGGAGAGCGAAGGGCAGGAAGGCCAGGTGGAATGTGAGGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 90 bp | CTCTTCAGGGCACCTTGGACGATGGTGCACGGGCCCAGGATCCGCTaGCTCAGCTTCACCAGCCCGTCCCGAATCTCATTGCCAAAAATG | + |
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Preference number: 5 (lower is better) Translates to: LFRAPWTMVHGPRIR*LSFTSPSRISLPKM Trigger: CATTTTTGGCAATGAGATTCGGGACGGGCTGGTGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGCCCTGAAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTGGCCCTTCGCTCTCCCTaGCACCGAGCTTCTCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ILQEGEEEDAFRSAAMSLALRSP*HRASPA Trigger: GGCGGGAGAAGCTCGGTGCAAGGGAGAGCGAAGGGC...CAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 90 bp | ATGGGGCATAGCCATTGTACTTCCCGGAGTCCAGGGCATCCTTCATaGCTTGGGTCACTTCAGGGTCTGTGGGCAGGTTCCCAAACACAG | + |
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Preference number: 5 (lower is better) Translates to: MGHSHCTSRSPGHPS*LGSLQGLWAGSQTQ Trigger: CTGTGTTTGGGAACCTGCCCACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCCCTGGACTCCGGGAAGTACAATGGCTATGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CCA 90 bp | CATCTCAATTCCCACCATAAGGTACATGGCTCCAGATGGGCGGACTaGCTGGAGTCCAGGAATGGCAGACAACGCCCCATAGCAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: HLNSHHKVHGSRWAD*LESRNGRQRPIAEV Trigger: GACCTCTGCTATGGGGCGTTGTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATCTGGAGCCATGTACCTTATGGTGGGAATTGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 90 bp | GAAGTGCTCCATCTCAATTCCCACCATAAGGTACATGGCTCCAGATaGGCGGACTGGCTGGAGTCCAGGAATGGCAGACAACGCCCCATA | + |
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Preference number: 5 (lower is better) Translates to: EVLHLNSHHKVHGSR*ADWLESRNGRQRPI Trigger: TATGGGGCGTTGTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATCTGGAGCCATGTACCTTATGGTGGGAATTGAGATGGAGCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS TCA 90 bp | GCTAAGATGGGGACGCATTGCCTTTCAGCCACTGCCAAAATCTTCTaGAGGTGCCGCTTACTGAACACAGAGCCACAGGGATTGGACGGG | + |
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Preference number: 5 (lower is better) Translates to: AKMGTHCLSATAKIF*RCRLLNTEPQGLDG Trigger: CCCGTCCAATCCCTGTGGCTCTGTGTTCAGTAAGCGGCACCTTCAGAAGATTTTGGCAGTGGCTGAAAGGCAATGCGTCCCCATCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 90 bp | ACCCGGAAGAAATTTGGGTACTCGAAGCACGTGGCTGGGAGGCAGTaGACAGACTGCTCCGCAATTAACCGCTCTGTGAATTCCACGTCA | + |
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Preference number: 5 (lower is better) Translates to: TRKKFGYSKHVAGRQ*TDCSAINRSVNSTS Trigger: TGACGTGGAATTCACAGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCACGTGCTTCGAGTACCCAAATTTCTTCCGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS TCA 90 bp | TTCTGTCCAGGATTGGCCAACACGGCTAGACACAGCTCAATGGCCTaGCTGCAGCCACTCGTCAGAATGACATCCTTAGCTTCCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FCPGLANTARHSSMA*LQPLVRMTSLASRG Trigger: TCCTCTGGAAGCTAAGGATGTCATTCTGACGAGTGGCTGCAGTCAGGCCATTGAGCTGTGTCTAGCCGTGTTGGCCAATCCTGGACAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 90 bp | TGGCTGGGAGGCAGTGGACAGACTGCTCCGCAATTAACCGCTCTGTaGATTCCACGTCATTCTCAAATTCTGGGAAGTGCTCCATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: WLGGSGQTAPQLTAL*IPRHSQILGSAPSQ Trigger: TTGAGATGGAGCACTTCCCAGAATTTGAGAATGACGTGGAATTCACAGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCTGATGTTCTGTCCAGGATaGGCCAACACGGCTAGACAC | + |
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Preference number: 5 (lower is better) Translates to: ILQEGEEEDAFRSAAMSLMFCPG*ANTARH Trigger: GTGTCTAGCCGTGTTGGCCAATCCTGGACAGAACAT...CAGAGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS TCA 90 bp | GATTCGGCTTCACCTTCATGTTGTCCACAATGGCTCGGATGGGATTaGAGGTTTTATTGGACATGTCAGAGGGCCTCACATTCCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: DSASPSCCPQWLGWD*RFYWTCQRASHSTW Trigger: CCAGGTGGAATGTGAGGCCCTCTGACATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAGCCGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS GCA 90 bp | AAATTTGGGTACTCGAAGCACGTGGCTGGGAGGCAGTGGACAGACTaGTCCGCAATTAACCGCTCTGTGAATTCCACGTCATTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: KFGYSKHVAGRQWTD*SAINRSVNSTSFSN Trigger: ATTTGAGAATGACGTGGAATTCACAGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCACGTGCTTCGAGTACCCAAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCGGCATCCTTCATGGCTaGGGTCACTTCAGGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TGGRRNNLQILMRCFGGPGILHG*GHFRVC Trigger: ACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCC...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ACTGGGGGAAGAAGAAATAATCTTCAAATCTTGATGCGGTGCTTTGGAGGTCCCGGCTTCACCTTCATGTaGTCCACAATGGCTCGGATG | + |
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Preference number: 5 (lower is better) Translates to: TGGRRNNLQILMRCFGGPGFTFM*STMARM Trigger: CATCCGAGCCATTGTGGACAACATGAAGGTGAAGCC...GGGACCTCCAAAGCACCGCATCAAGATTTGAAGATTATTTCTTCTTCCCCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGGAACCAGCCAGCGCTaGGCCAGCCCACCACAGGAC | + |
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Preference number: 5 (lower is better) Translates to: MRCAPILRKPDTSRSNQFGTSQR*ASPPQD Trigger: GTCCTGTGGTGGGCTGGCCAAGCGCTGGCTGGTTCC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTCCGTCCCGAATCTCATaGCCAAAAATGTCTCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: MILQEGEEEDAFRSAAMSPSRIS*PKMSLR Trigger: TCGAAGAGACATTTTTGGCAATGAGATTCGGGACGG...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATGATTCTACAAGAAGGTGAGGAGGAAGATGCTTTCCGGTCCGCAGCAATGTCTATGGCTCGGATGGGATaGAAGGTTTTATTGGACATG | + |
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Preference number: 5 (lower is better) Translates to: MILQEGEEEDAFRSAAMSMARMG*KVLLDM Trigger: CATGTCCAATAAAACCTTCAATCCCATCCGAGCCAT...AGACATTGCTGCGGACCGGAAAGCATCTTCCTCCTCACCTTCTTGTAGAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS-3UTR CAA 90 bp | ATGAGGTGTGCTCCTATTTTAAGAAAACCTGATACAAGCAGATCTAATCAGTTTGCCATTGGTTCATATTaGCAATCTGAAAACACCATG | + |
|
Preference number: 5 (lower is better) Translates to: MRCAPILRKPDTSRSNQFAIGSY*QSENTM Trigger: CATGGTGTTTTCAGATTGCAAATATGAACCAATGGC...AAACTGATTAGATCTGCTTGTATCAGGTTTTCTTAAAATAGGAGCACACCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | TCCAGCCCAGCCTCCAGCCAGGAACCAGCCAGCGCTTaGCCAGCCCACCACAGGACAGGATGGGGACATTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPASSQEPASA*PAHHRTGWGHW Trigger: CCAATGTCCCCATCCTGTCCTGTGGTGGGCTGGCCAAGCGCTGGCTGGTTCCTGGCTGGAGGCTGGGCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS TCA 72 bp | GCACCTTGGACGATGGTGCACGGGCCCAGGATCCGCTaGCTCAGCTTCACCAGCCCGTCCCGAATCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: APWTMVHGPRIR*LSFTSPSRISL Trigger: CAATGAGATTCGGGACGGGCTGGTGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | TGGCTCCAGATGGGCGGACTGGCTGGAGTCCAGGAATaGCAGACAACGCCCCATAGCAGAGGTCCGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLQMGGLAGVQE*QTTPHSRGPHW Trigger: CCAATGCGGACCTCTGCTATGGGGCGTTGTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATCTGGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 90 bp | GTAGAACTCCTGAGGGGTGCGCTGAAGGATGCTCTTCAGGGCACCTaGGACGATGGTGCACGGGCCCAGGATCCGCTGACTCAGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VELLRGALKDALQGT*DDGARAQDPLTQLH Trigger: GTGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGCCCTGAAGAGCATCCTTCAGCGCACCCCTCAGGAGTTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS GCA 72 bp | GCTGAAGGATGCTCTTCAGGGCACCTTGGACGATGGTaGACGGGCCCAGGATCCGCTGACTCAGCTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AEGCSSGHLGRW*TGPGSADSASP Trigger: TGGTGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGCCCTGAAGAGCATCCTTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | TGCGCTGAAGGATGCTCTTCAGGGCACCTTGGACGATaGTGCACGGGCCCAGGATCCGCTGACTCAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAEGCSSGHLGR*CTGPGSADSAS Trigger: TGAAGCTGAGTCAGCGGATCCTGGGCCCGTGCACCATCGTCCAAGGTGCCCTGAAGAGCATCCTTCAGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 90 bp | AGAGGGCCTCACATTCCACCTGGCCTTCCTGCCCTTCGCTCTCCCTaGCACCGAGCTTCTCCCGCCAATATTGACGCGAACATCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGPHIPPGLPALRSP*HRASPANIDANIQH Trigger: GTGCTGGATGTTCGCGTCAATATTGGCGGGAGAAGCTCGGTGCAAGGGAGAGCGAAGGGCAGGAAGGCCAGGTGGAATGTGAGGCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS GCA 72 bp | ACATTCCACCTGGCCTTCCTGCCCTTCGCTCTCCCTTaGACCGAGCTTCTCCCGCCAATATTGACGCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: TFHLAFLPFALP*TELLPPILTRT Trigger: TGTTCGCGTCAATATTGGCGGGAGAAGCTCGGTGCAAGGGAGAGCGAAGGGCAGGAAGGCCAGGTGGAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CCA 72 bp | AGCCATTGTACTTCCCGGAGTCCAGGGCATCCTTCATaGCTTGGGTCACTTCAGGGTCTGTGGGCAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHCTSRSPGHPS*LGSLQGLWAGS Trigger: GGAACCTGCCCACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCCCTGGACTCCGGGAAGTACAATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CCA 72 bp | TCCCACCATAAGGTACATGGCTCCAGATGGGCGGACTaGCTGGAGTCCAGGAATGGCAGACAACGCCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SHHKVHGSRWAD*LESRNGRQRPI Trigger: TATGGGGCGTTGTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATCTGGAGCCATGTACCTTATGGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | CACCTCGGGGACTGTGATGACAACCCGGAAGAAATTTaGGTACTCGAAGCACGTGGCTGGGAGGCAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLGDCDDNPEEI*VLEARGWEAVD Trigger: GTCCACTGCCTCCCAGCCACGTGCTTCGAGTACCCAAATTTCTTCCGGGTTGTCATCACAGTCCCCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 90 bp | GGCATAGCCATTGTACTTCCCGGAGTCCAGGGCATCCTTCATGGCTaGGGTCACTTCAGGGTCTGTGGGCAGGTTCCCAAACACAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GIAIVLPGVQGILHG*GHFRVCGQVPKHSR Trigger: CCTACTGTGTTTGGGAACCTGCCCACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCCCTGGACTCCGGGAAGTACAATGGCTATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CCA 72 bp | TTGTACTTCCCGGAGTCCAGGGCATCCTTCATGGCTTaGGTCACTTCAGGGTCTGTGGGCAGGTTCCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LYFPESRASFMA*VTSGSVGRFPN Trigger: GTTTGGGAACCTGCCCACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCCCTGGACTCCGGGAAGTACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | TCGCTCTCCCTTGCACCGAGCTTCTCCCGCCAATATTaGCGCGAACATCCAGCACTGAAGGTAGGCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLAPSFSRQY*REHPALKVGCH Trigger: ATGACAGCCTACCTTCAGTGCTGGATGTTCGCGTCAATATTGGCGGGAGAAGCTCGGTGCAAGGGAGAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | CCAATGTCCTGTAGAGGGAAAACCCGGGCCTCGGAATaGGGATGTTCTGTCCAGGATTGGCCAACACGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PMSCRGKTRASE*GCSVQDWPTRL Trigger: TAGCCGTGTTGGCCAATCCTGGACAGAACATCCTCATTCCGAGGCCCGGGTTTTCCCTCTACAGGACATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS GCA 72 bp | GGAAGCTTAAAGTGTCCTGGTAGAACTCCTGAGGGGTaGGCTGAAGGATGCTCTTCAGGGCACCTTGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLKCPGRTPEG*AEGCSSGHLGR Trigger: TCGTCCAAGGTGCCCTGAAGAGCATCCTTCAGCGCACCCCTCAGGAGTTCTACCAGGACACTTTAAGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS GCA 72 bp | TACTCGAAGCACGTGGCTGGGAGGCAGTGGACAGACTaGTCCGCAATTAACCGCTCTGTGAATTCCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSKHVAGRQWTD*SAINRSVNSTS Trigger: TGACGTGGAATTCACAGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCACGTGCTTCGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 72 bp | ATTGTACTTCCCGGAGTCCAGGGCATCCTTCATGGCTaGGGTCACTTCAGGGTCTGTGGGCAGGTTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IVLPGVQGILHG*GHFRVCGQVPK Trigger: TTTGGGAACCTGCCCACAGACCCTGAAGTGACCCAAGCCATGAAGGATGCCCTGGACTCCGGGAAGTACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | GGATTGGCCAACACGGCTAGACACAGCTCAATGGCCTaGCTGCAGCCACTCGTCAGAATGACATCCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLANTARHSSMA*LQPLVRMTSLA Trigger: AGCTAAGGATGTCATTCTGACGAGTGGCTGCAGTCAGGCCATTGAGCTGTGTCTAGCCGTGTTGGCCAATCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | GGGACGCATTGCCTTTCAGCCACTGCCAAAATCTTCTaGAGGTGCCGCTTACTGAACACAGAGCCACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTHCLSATAKIF*RCRLLNTEPQG Trigger: TCCCTGTGGCTCTGTGTTCAGTAAGCGGCACCTTCAGAAGATTTTGGCAGTGGCTGAAAGGCAATGCGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | CATCTCAATTCCCACCATAAGGTACATGGCTCCAGATaGGCGGACTGGCTGGAGTCCAGGAATGGCAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: HLNSHHKVHGSR*ADWLESRNGRQ Trigger: TTGTCTGCCATTCCTGGACTCCAGCCAGTCCGCCCATCTGGAGCCATGTACCTTATGGTGGGAATTGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CCA 72 bp | AAATTTGGGTACTCGAAGCACGTGGCTGGGAGGCAGTaGACAGACTGCTCCGCAATTAACCGCTCTGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KFGYSKHVAGRQ*TDCSAINRSVN Trigger: ATTCACAGAGCGGTTAATTGCGGAGCAGTCTGTCCACTGCCTCCCAGCCACGTGCTTCGAGTACCCAAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 90 bp | ACCTTCATGTTGTCCACAATGGCTCGGATGGGATTGAAGGTTTTATaGGACATGTCAGAGGGCCTCACATTCCACCTGGCCTTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TFMLSTMARMGLKVL*DMSEGLTFHLAFLP Trigger: GGGCAGGAAGGCCAGGTGGAATGTGAGGCCCTCTGACATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | TGTGGGCAGGTTCCCAAACACAGTAGGGTCCCCAATTaGCAGAGAGATCACGGTTTTGTTCGGATTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGQVPKHSRVPN*QRDHGFVRIRL Trigger: AAGCCGAATCCGAACAAAACCGTGATCTCTCTGTCAATTGGGGACCCTACTGTGTTTGGGAACCTGCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CAA 90 bp | GGATTCGGCTTCACCTTCATGTTGTCCACAATGGCTCGGATGGGATaGAAGGTTTTATTGGACATGTCAGAGGGCCTCACATTCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFGFTFMLSTMARMG*KVLLDMSEGLTFHL Trigger: CAGGTGGAATGTGAGGCCCTCTGACATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAGCCGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CAA 90 bp | TTCCCAAACACAGTAGGGTCCCCAATTGACAGAGAGATCACGGTTTaGTTCGGATTCGGCTTCACCTTCATGTTGTCCACAATGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FPNTVGSPIDREITV*FGFGFTFMLSTMAR Trigger: CCGAGCCATTGTGGACAACATGAAGGTGAAGCCGAATCCGAACAAAACCGTGATCTCTCTGTCAATTGGGGACCCTACTGTGTTTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CAA 72 bp | ACAGTAGGGTCCCCAATTGACAGAGAGATCACGGTTTaGTTCGGATTCGGCTTCACCTTCATGTTGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TVGSPIDREITV*FGFGFTFMLST Trigger: TGTGGACAACATGAAGGTGAAGCCGAATCCGAACAAAACCGTGATCTCTCTGTCAATTGGGGACCCTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CAA 90 bp | GACAGAGAGATCACGGTTTTGTTCGGATTCGGCTTCACCTTCATGTaGTCCACAATGGCTCGGATGGGATTGAAGGTTTTATTGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: DREITVLFGFGFTFM*STMARMGLKVLLDM Trigger: CATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAGCCGAATCCGAACAAAACCGTGATCTCTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS TCA 72 bp | TCACCTTCATGTTGTCCACAATGGCTCGGATGGGATTaGAGGTTTTATTGGACATGTCAGAGGGCCTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SPSCCPQWLGWD*RFYWTCQRASH Trigger: ATGTGAGGCCCTCTGACATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CCA 72 bp | AAAACACCATGTCACCATAGATCTCATCGGCTAAGATaGGGACGCATTGCCTTTCAGCCACTGCCAAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: KTPCHHRSHRLR*GRIAFQPLPKS Trigger: AGATTTTGGCAGTGGCTGAAAGGCAATGCGTCCCCATCTTAGCCGATGAGATCTATGGTGACATGGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001720.14 |
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| CDS CAA 72 bp | TTCACCTTCATGTTGTCCACAATGGCTCGGATGGGATaGAAGGTTTTATTGGACATGTCAGAGGGCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: FTFMLSTMARMG*KVLLDMSEGLT Trigger: TGTGAGGCCCTCTGACATGTCCAATAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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| CDS CAA 72 bp | ATCACGGTTTTGTTCGGATTCGGCTTCACCTTCATGTaGTCCACAATGGCTCGGATGGGATTGAAGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ITVLFGFGFTFM*STMARMGLKVL Trigger: TAAAACCTTCAATCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAGCCGAATCCGAACAAAACCGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001720.14 ENSMUST00000143741.2 |
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