Pregenerated sensors for TASP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039033Ensembl transcript IDs: ENSMUST00000046656.9, ENSMUST00000099304.4, ENSMUST00000110079.9
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAAACCATTCTGTGTTCAAGGAAAAATGCCCTGTCTGAGGGATaGGAACAAGAGTTTAAGTTACCACACCATCCACTTAAACTGACA | + |
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Preference number: 1 (lower is better) Translates to: TETILCSRKNALSEG*EQEFKLPHHPLKLT Trigger: TGTCAGTTTAAGTGGATGGTGTGGTAACTTAAACTCTTGTTCTCATCCCTCAGACAGGGCATTTTTCCTTGAACACAGAATGGTTTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR-3UTR TCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTCCAAAGCTCAGGCTCTaGAATGCCTCTCAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: CQPALSIAALVSQAVPEVPKLRL*NASQTL Trigger: AAGTGTCTGAGAGGCATTTCAGAGCCTGAGCTTTGG...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR-3UTR TCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAACCAAAGCTCAGGCTCTaGAATGCCTCTCAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: HLRLECQPALSIAALVSQPKLRL*NASQTL Trigger: AAGTGTCTGAGAGGCATTTCAGAGCCTGAGCTTTGG...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR-3UTR GCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAAGCAAGCGCACACACTaGACACGGATACACACCCAC | + |
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Preference number: 2 (lower is better) Translates to: HSSVQTHCINHSWYLLKKSKRTH*TRIHTH Trigger: GTGGGTGTGTATCCGTGTGCAGTGTGTGCGCTTGCT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR-3UTR TCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAACCAAAGCTCAGGCTCTaGAATGCCTCTCAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: HSSVQTHCINHSWYLLKKPKLRL*NASQTL Trigger: AAGTGTCTGAGAGGCATTTCAGAGCCTGAGCTTTGG...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR GCA 72 bp | GAACTCATCCCATCCGGGGGAAGCAAGCGCACACACTaGACACGGATACACACCCACACAGACTTCCGCTCA | + |
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Preference number: 3 (lower is better) Translates to: ELIPSGGSKRTH*TRIHTHTDFRS Trigger: TGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGTGTGTGCGCTTGCTTCCCCCGGATGGGATGAGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR TCA 72 bp | ACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTaGAATGCCTCTCAGACACTTCATATTCAGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TQLQLNSPKLRL*NASQTLHIQPG Trigger: TCCAGGCTGAATATGAAGTGTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| 3UTR TCA 72 bp | TTACCACACCATCCACTTAAACTGACACCATATTACTaGTTACTGTTATTAAATGGACTACAATCAAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LPHHPLKLTPYY*LLLLNGLQSRS Trigger: TGACCTTGATTGTAGTCCATTTAATAACAGTAATCAGTAATATGGTGTCAGTTTAAGTGGATGGTGTGGTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGCAACATTCCCTTCGTaGTCCACGACCACAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRATFPS*STTTAP Trigger: GGGTGCTGTGGTCGTGGATCACGAAGGGAATGTTGC...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGAGGTACTCACAGCTGTaGAGTAGGGGTTCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLERYSQL*SRGSER Trigger: GCGCTCAGAACCCCTACTCCACAGCTGTGAGTACCT...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGAGCAGATGCCTGAGATaGTCTGGAAGGCAGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLESRCLR*SGRQSF Trigger: GAAGGACTGCCTTCCAGATCATCTCAGGCATCTGCT...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGATGGTGCGCACAAGATaGTCGCCACATCCTGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLEMVRTR*SPHPEV Trigger: TACCTCAGGATGTGGCGAGCATCTTGTGCGCACCAT...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGGCAACAGACTGTCCTaGCACAGCACCAGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALGNRLS*HSTRRE Trigger: CTCCCTCCTGGTGCTGTGGCAGGACAGTCTGTTGCC...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGTTAGCAGCAGATGCCTaGGATGATCTGGAAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLELAADA*DDLEGS Trigger: ACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAA...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGTTCAGAATGATAGCCTaGACCTGCATGCACCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLEFRMIA*TCMHQH Trigger: GTGCTGGTGCATGCAGGTGCAGGCTATCATTCTGAA...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTCTGCCCAACTCTCCCTaGATGTTTCAAGGCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVLPNSP*MFQGQA Trigger: GGCTTGGCCTTGAAACATCCAGGGAGAGTTGGGCAG...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTAGGTACTCACAGCTGTaGAGTAGGGGTTCTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVRYSQL*SRGSER Trigger: GCGCTCAGAACCCCTACTCCACAGCTGTGAGTACCT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGATTGGCTTTGCCGTCCTaGGCTGACATATATCCCACG | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRLALPS*ADIYPT Trigger: CGTGGGATATATGTCAGCCCAGGACGGCAAAGCCAA...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGTGAAATGTGAGTCTTaGCTTTGCCGTCCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRVKCES*LCRPGL Trigger: CAGCCCAGGACGGCAAAGCCAAGACTCACATTTCAC...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAAAACCCCACCTTCGATaGCAACAGACTGTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRKPHLR*QQTVLP Trigger: TGGCAGGACAGTCTGTTGCCATCGAAGGTGGGGTTT...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGATTAGCAGCAGATGCCTaGGATGATCTGGAAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRLAADA*DDLEGS Trigger: ACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAA...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACGCAACATTCCCTTCGTaGTCCACGACCACAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDATFPS*STTTAP Trigger: GGGTGCTGTGGTCGTGGATCACGAAGGGAATGTTGC...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGGGAGGAATTCTGCCTaGAGAGAGCTTGCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALGRNSA*RELALL Trigger: CAGAAGGGCAAGCTCTCTGCAGGCAGAATTCCTCCC...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGATATCCCATGATCCACTaGCCATCTGTAGGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRYPMIH*PSVGSF Trigger: GAAGGAGCCTACAGATGGGCAGTGGATCATGGGATA...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGGCAACAGACTGTCCTaGCACAGCACCAGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQGNRLS*HSTRRE Trigger: CTCCCTCCTGGTGCTGTGGCAGGACAGTCTGTTGCC...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAATGCCTGAGATGATCTaGAAGGCAGTCCTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRMPEMI*KAVLLQ Trigger: CTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCAT...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGTGAAATGTGAGTCTTaGCTTTGCCGTCCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVVKCES*LCRPGL Trigger: CAGCCCAGGACGGCAAAGCCAAGACTCACATTTCAC...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTAAACCCCACCTTCGATaGCAACAGACTGTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVKPHLR*QQTVLP Trigger: TGGCAGGACAGTCTGTTGCCATCGAAGGTGGGGTTT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTAGCAGATGCCTGAGATaGTCTGGAAGGCAGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALSRCLR*SGRQSF Trigger: GAAGGACTGCCTTCCAGATCATCTCAGGCATCTGCT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGACTGAGACTGGATTCTTaGTTCCACTCAGTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRLRLDS*FHSVLQ Trigger: TTGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAG...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGTCCAACAGAGCTTGGTaGGCATCTTCAGCTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLESNRAW*ASSACK Trigger: TTTACAAGCTGAAGATGCTCACCAAGCTCTGTTGGA...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTACCAGGAGGGAGTCGTaGAATGTGAGTCTTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVTRRES*NVSLGF Trigger: AAAGCCAAGACTCACATTTCACGACTCCCTCCTGGT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACGGGAGGAATTCTGCCTaGAGAGAGCTTGCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDGRNSA*RELALL Trigger: CAGAAGGGCAAGCTCTCTGCAGGCAGAATTCCTCCC...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTTATCCCATGATCCACTaGCCATCTGTAGGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVYPMIH*PSVGSF Trigger: GAAGGAGCCTACAGATGGGCAGTGGATCATGGGATA...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACAGGCAACAGACTGTCCTaGCACAGCACCAGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITGNRLS*HSTRRE Trigger: CTCCCTCCTGGTGCTGTGGCAGGACAGTCTGTTGCC...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTTTGGCTTTGCCGTCCTaGGCTGACATATATCCCACG | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALLALPS*ADIYPT Trigger: CGTGGGATATATGTCAGCCCAGGACGGCAAAGCCAA...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGAAATGTGAGTCTTaGCTTTGCCGTCCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALVKCES*LCRPGL Trigger: CAGCCCAGGACGGCAAAGCCAAGACTCACATTTCAC...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTTTAGCAGCAGATGCCTaGGATGATCTGGAAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALLAADA*DDLEGS Trigger: ACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAA...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTCTGAGACTGGATTCTTaGTTCCACTCAGTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVLRLDS*FHSVLQ Trigger: TTGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAG...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR TCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACAGCAACATTCCCTTCGTaGTCCACGACCACAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITATFPS*STTTAP Trigger: GGGTGCTGTGGTCGTGGATCACGAAGGGAATGTTGC...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAACAGAGCAGCAGCCACTaGATCTGTAGCAAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQQSSSH*ICSKST Trigger: GGTGCTCTTGCTACAGATGCAGTGGCTGCTGCTCTG...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR GCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGGGAGGAATTCTGCCTaGAGAGAGCTTGCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQGRNSA*RELALL Trigger: CAGAAGGGCAAGCTCTCTGCAGGCAGAATTCCTCCC...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACATGGTGCGCACAAGATaGTCGCCACATCCTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDMVRTR*SPHPEV Trigger: TACCTCAGGATGTGGCGAGCATCTTGTGCGCACCAT...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAACTCTGAAGAACATCTaGATGACCGGAGAACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRTLKNI*MTGERS Trigger: TGATCGTTCTCCGGTCATGCAGATGTTCTTCAGAGT...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGAGTGTCTGTTTATCTTaGGAGGAGTCAGACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLESVCLS*EESDSE Trigger: TTCAGAGTCTGACTCCTCCCAAGATAAACAGACACT...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAGACAGGCAAGGAAAGGTaGACTGATAAACTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTDTHPHRLPLTHLRLETGKER*TDKLVL Trigger: CAAAACAAGTTTATCAGTTCACCTTTCCTTGCCTGT...CTCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACTTCAGAATGATAGCCTaGACCTGCATGCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDFRMIA*TCMHQH Trigger: GTGCTGGTGCATGCAGGTGCAGGCTATCATTCTGAA...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACACAGAGCAGCAGCCACTaGATCTGTAGCAAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITQSSSH*ICSKST Trigger: GGTGCTCTTGCTACAGATGCAGTGGCTGCTGCTCTG...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACATGCCTGAGATGATCTaGAAGGCAGTCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDMPEMI*KAVLLQ Trigger: CTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCAT...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAAGTGTCTGTTTATCTTaGGAGGAGTCAGACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRSVCLS*EESDSE Trigger: TTCAGAGTCTGACTCCTCCCAAGATAAACAGACACT...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTTTCTCAATTGCCTTCTaGCAAGCTCGTTTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVFSIAF*QARLHT Trigger: TGTATGCAAACGAGCTTGTCAGAAGGCAATTGAGAA...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACCTGAGACTGGATTCTTaGTTCCACTCAGTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDLRLDS*FHSVLQ Trigger: TTGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAG...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAATCACACAAGAGCCTGTaGGCAACTGAGACTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQSHKSL*ATETGF Trigger: GAATCCAGTCTCAGTTGCTCACAGGCTCTTGTGTGA...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACTCCAACAGAGCTTGGTaGGCATCTTCAGCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDSNRAW*ASSACK Trigger: TTTACAAGCTGAAGATGCTCACCAAGCTCTGTTGGA...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACATTCAGAATGATAGCCTaGACCTGCATGCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITFRMIA*TCMHQH Trigger: GTGCTGGTGCATGCAGGTGCAGGCTATCATTCTGAA...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGAACTTTCCATCCATTATaGTGGCATCACATTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRTFHPL*WHHIQS Trigger: AGATTGAATGTGATGCCAGCATAATGGATGGAAAGT...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACATATCCCATGATCCACTaGCCATCTGTAGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITYPMIH*PSVGSF Trigger: GAAGGAGCCTACAGATGGGCAGTGGATCATGGGATA...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACAATGCCTGAGATGATCTaGAAGGCAGTCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIAALVSQAVPEVAIKITMPEMI*KAVLLQ Trigger: CTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCAT...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTAGTGTCTGTTTATCTTaGGAGGAGTCAGACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALSVCLS*EESDSE Trigger: TTCAGAGTCTGACTCCTCCCAAGATAAACAGACACT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTATGCTCTCTGTAGTATaGCTCCACAGAAATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALMLSVV*LHRNST Trigger: TGTGGAATTTCTGTGGAGCCATACTACAGAGAGCAT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACTTCTCAATTGCCTTCTaGCAAGCTCGTTTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: HPTSIKQPKAQALKCLSDFSIAF*QARLHT Trigger: TGTATGCAAACGAGCTTGTCAGAAGGCAATTGAGAA...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTACTTTCCATCCATTATaGTGGCATCACATTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CQPALSIAALVSQAVPEVTFHPL*WHHIQS Trigger: AGATTGAATGTGATGCCAGCATAATGGATGGAAAGT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAACTCTGAAGAACATCTaGATGACCGGAGAACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQTLKNI*MTGERS Trigger: TGATCGTTCTCCGGTCATGCAGATGTTCTTCAGAGT...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAACTGCCCAACTCTCCCTaGATGTTTCAAGGCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSVQTHCINHSWYLLKKLPNSP*MFQGQA Trigger: GGCTTGGCCTTGAAACATCCAGGGAGAGTTGGGCAG...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAATTCTCAATTGCCTTCTaGCAAGCTCGTTTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQFSIAF*QARLHT Trigger: TGTATGCAAACGAGCTTGTCAGAAGGCAATTGAGAA...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTACTTTCCATCCATTATaGTGGCATCACATTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTHLRLECQPALSIAALTFHPL*WHHIQS Trigger: AGATTGAATGTGATGCCAGCATAATGGATGGAAAGT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAATGCTCTCTGTAGTATaGCTCCACAGAAATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLRLECQPALSIAALVSQMLSVV*LHRNST Trigger: TGTGGAATTTCTGTGGAGCCATACTACAGAGAGCAT...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAATTGGCTTTGCCGTCCTaGGCTGACATATATCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HSSVQTHCINHSWYLLKKLALPS*ADIYPT Trigger: CGTGGGATATATGTCAGCCCAGGACGGCAAAGCCAA...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAAAACCCCACCTTCGATaGCAACAGACTGTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSVQTHCINHSWYLLKKKPHLR*QQTVLP Trigger: TGGCAGGACAGTCTGTTGCCATCGAAGGTGGGGTTT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR TCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAACCAGGAGGGAGTCGTaGAATGTGAGTCTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSVQTHCINHSWYLLKKTRRES*NVSLGF Trigger: AAAGCCAAGACTCACATTTCACGACTCCCTCCTGGT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR GCA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAACTCTGAAGAACATCTaGATGACCGGAGAACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSVQTHCINHSWYLLKKTLKNI*MTGERS Trigger: TGATCGTTCTCCGGTCATGCAGATGTTCTTCAGAGT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS CCA 90 bp | CAGCCTGCCCAACTCTCCCTGGATGTTTCAAGGCCAAGCCCCCACTaGAGACAGCAGCAGCAACATTCCCTTCGTGATCCACGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QPAQLSLDVSRPSPH*RQQQQHSLRDPRPQ Trigger: CTGTGGTCGTGGATCACGAAGGGAATGTTGCTGCTGCTGTCTCCAGTGGGGGCTTGGCCTTGAAACATCCAGGGAGAGTTGGGCAGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACCTGCCTGCAGAGAGCTaGCCCTTCTGCCCTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HPTSIKQPKAQALKCLSDLPAES*PFCPSH Trigger: GTGTGAAGGGCAGAAGGGCAAGCTCTCTGCAGGCAG...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS GCA 90 bp | CCTGCATGCACCAGCACAAAGCCCCCTCGTTTCTCCTTACAGGGCTaGTGTGTTTCTAACTCCTTGACTGTTACTTTAGCAGCAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PACTSTKPPRFSLQG*CVSNSLTVTLAADA Trigger: GGCATCTGCTGCTAAAGTAACAGTCAAGGAGTTAGAAACACAGCAGCCCTGTAAGGAGAAACGAGGGGGCTTTGTGCTGGTGCATGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS GCA 90 bp | GCAGTGTCTGTTTATCTTGGGAGGAGTCAGACTCTGAAGAACATCTaGATGACCGGAGAACGATCACTCCACCGAGCACGCCATCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVSVYLGRSQTLKNI*MTGERSLHRARHLH Trigger: GTGAAGATGGCGTGCTCGGTGGAGTGATCGTTCTCCGGTCATGCAGATGTTCTTCAGAGTCTGACTCCTCCCAAGATAAACAGACACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CAA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACACTGCCTGCAGAGAGCTaGCCCTTCTGCCCTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SIAALVSQAVPEVAIKITLPAES*PFCPSH Trigger: GTGTGAAGGGCAGAAGGGCAAGCTCTCTGCAGGCAG...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS CCA 90 bp | CCGTCCTGGGCTGACATATATCCCACGCACATGCTCTCTGTAGTATaGCTCCACAGAAATTCCACAAGCAGTGTCTGTTTATCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSWADIYPTHMLSVV*LHRNSTSSVCLSWE Trigger: CTCCCAAGATAAACAGACACTGCTTGTGGAATTTCTGTGGAGCCATACTACAGAGAGCATGTGCGTGGGATATATGTCAGCCCAGGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CAA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTACTGAGACTGGATTCTaGATTCCACTCAGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLTHLRLECQPALSIAALTETGF*IPLSAP Trigger: TGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAGT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCACACGGATACACACCCACACAGACTTCCGCTCACCCATCTAAGACTCGACATTTTCCTTTGCGCTaGATTGTCGTCTTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAHGYTPTQTSAHPSKTRHFPLR*IVVFSS Trigger: TGAAGAGAAGACGACAATCAAGCGCAAAGGAAAATG...TCGAGTCTTAGATGGGTGAGCGGAAGTCTGTGTGGGTGTGTATCCGTGTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS CCA 90 bp | CCTGAGTCATTTTCCTTTGCGCTTGATTGTCGTCTTCTCTTCAGCTaGATGAAGTCTGTTTCCACCCTTTCTGCCAGCTCTAGTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PESFSFALDCRLLFS*MKSVSTLSASSSFL Trigger: GAGGAAACTAGAGCTGGCAGAAAGGGTGGAAACAGACTTCATCCAGCTGAAGAGAAGACGACAATCAAGCGCAAAGGAAAATGACTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS CCA 90 bp | GTAGTATGGCTCCACAGAAATTCCACAAGCAGTGTCTGTTTATCTTaGGAGGAGTCAGACTCTGAAGAACATCTGCATGACCGGAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: VVWLHRNSTSSVCLS*EESDSEEHLHDRRT Trigger: CGTTCTCCGGTCATGCAGATGTTCTTCAGAGTCTGACTCCTCCCAAGATAAACAGACACTGCTTGTGGAATTTCTGTGGAGCCATACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CAA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACACTGAGACTGGATTCTaGATTCCACTCAGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPTSIKQPKAQALKCLSDTETGF*IPLSAP Trigger: TGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAGT...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
||
| CDS-3UTR CAA 90 bp | CATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAAGTCTCCAACAGAGCTaGGTGAGCATCTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRLECQPALSIAALVSQSLQQS*VSIFSL Trigger: CAAGCTGAAGATGCTCACCAAGCTCTGTTGGAGACT...TTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
||
| CDS TCA 90 bp | TGCTGTGTTTCTAACTCCTTGACTGTTACTTTAGCAGCAGATGCCTaGGATGATCTGGAAGGCAGTCCTTCTCCAGAATTCATCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCVSNSLTVTLAADA*DDLEGSPSPEFIPF Trigger: GAAGGGGATGAATTCTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAAAGTAACAGTCAAGGAGTTAGAAACACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTAGCTCTAGTTTCCTCTaGTTCCTTTTAAATGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CQPALSIAALVSQAVPEVSSSFL*FLLNAA Trigger: AGCTGCATTTAAAAGGAACAAGAGGAAACTAGAGCT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACCTGAGTCATTTTCCTTaGCGCTTGATTGTCGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HPTSIKQPKAQALKCLSDLSHFP*RLIVVF Trigger: GAAGACGACAATCAAGCGCAAAGGAAAATGACTCAG...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | TGTCAACCAGCACTAAGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTACTGATAAACTTGTTTaGCATAGTCTCCAACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CQPALSIAALVSQAVPEVTDKLV*HSLQQS Trigger: GCTCTGTTGGAGACTATGCAAAACAAGTTTATCAGT...AACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACTTAGTGCTGGTTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS TCA 90 bp | AGTCATTTTCCTTTGCGCTTGATTGTCGTCTTCTCTTCAGCTGGATaGAGTCTGTTTCCACCCTTTCTGCCAGCTCTAGTTTCCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SHFPLRLIVVFSSAG*SLFPPFLPALVSSC Trigger: ACAAGAGGAAACTAGAGCTGGCAGAAAGGGTGGAAACAGACTTCATCCAGCTGAAGAGAAGACGACAATCAAGCGCAAAGGAAAATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTAGCTCTAGTTTCCTCTaGTTCCTTTTAAATGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PLTHLRLECQPALSIAALSSSFL*FLLNAA Trigger: AGCTGCATTTAAAAGGAACAAGAGGAAACTAGAGCT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACCATTTTCCTTTGCGCTaGATTGTCGTCTTCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HPTSIKQPKAQALKCLSDHFPLR*IVVFSS Trigger: TGAAGAGAAGACGACAATCAAGCGCAAAGGAAAATG...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CCGCTCACCCATCTAAGACTCGAGTGTCAACCAGCACTAAGTATAGCAGCACTTACTGATAAACTTGTTTaGCATAGTCTCCAACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLTHLRLECQPALSIAALTDKLV*HSLQQS Trigger: GCTCTGTTGGAGACTATGCAAAACAAGTTTATCAGT...AAGTGCTGCTATACTTAGTGCTGGTTGACACTCGAGTCTTAGATGGGTGAGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACCCAACTTCAATTAAACAGCCCAAAGCTCAGGCTCTGAAATGCCTCTCAGACAGCTCTAGTTTCCTCTaGTTCCTTTTAAATGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HPTSIKQPKAQALKCLSDSSSFL*FLLNAA Trigger: AGCTGCATTTAAAAGGAACAAGAGGAAACTAGAGCT...GTCTGAGAGGCATTTCAGAGCCTGAGCTTTGGGCTGTTTAATTGAAGTTGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACACTGAGTCATTTTCCTTaGCGCTTGATTGTCGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SIAALVSQAVPEVAIKITLSHFP*RLIVVF Trigger: GAAGACGACAATCAAGCGCAAAGGAAAATGACTCAG...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACACATTTTCCTTTGCGCTaGATTGTCGTCTTCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SIAALVSQAVPEVAIKITHFPLR*IVVFSS Trigger: TGAAGAGAAGACGACAATCAAGCGCAAAGGAAAATG...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAAGTCTCCAACAGAGCTaGGTGAGCATCTTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: HSSVQTHCINHSWYLLKKSLQQS*VSIFSL Trigger: CAAGCTGAAGATGCTCACCAAGCTCTGTTGGAGACT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAACTGAGACTGGATTCTaGATTCCACTCAGTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSSVQTHCINHSWYLLKKTETGF*IPLSAP Trigger: TGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAGT...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | AGTATAGCAGCACTTGTGTCCCAAGCAGTGCCCGAGGTTGCAATAAAAATTACAGGTGAACTGATAAACTaGTTTTGCATAGTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: SIAALVSQAVPEVAIKITGELIN*FCIVSN Trigger: GTTGGAGACTATGCAAAACAAGTTTATCAGTTCACC...TGTAATTTTTATTGCAACCTCGGGCACTGCTTGGGACACAAGTGCTGCTATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAACTGAGTCATTTTCCTTaGCGCTTGATTGTCGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HSSVQTHCINHSWYLLKKLSHFP*RLIVVF Trigger: GAAGACGACAATCAAGCGCAAAGGAAAATGACTCAG...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS-3UTR CAA 90 bp | CACTCTTCAGTTCAGACACATTGTATCAACCATAGTTGGTACCTCTTGAAGAAAGGTGAACTGATAAACTaGTTTTGCATAGTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HSSVQTHCINHSWYLLKKGELIN*FCIVSN Trigger: GTTGGAGACTATGCAAAACAAGTTTATCAGTTCACC...TTTCTTCAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | TCACGGGGCTCTCCAGGCGGCAAACCCCACCTTCGATaGCAACAGACTGTCCTGCCACAGCACCAGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRGSPGGKPHLR*QQTVLPQHQEG Trigger: TCCCTCCTGGTGCTGTGGCAGGACAGTCTGTTGCCATCGAAGGTGGGGTTTGCCGCCTGGAGAGCCCCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | GCCACATCCATAAAGAGCAGCCTGCCCAACTCTCCCTaGATGTTTCAAGGCCAAGCCCCCACTGGAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: ATSIKSSLPNSP*MFQGQAPTGDS Trigger: GCTGTCTCCAGTGGGGGCTTGGCCTTGAAACATCCAGGGAGAGTTGGGCAGGCTGCTCTTTATGGATGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | CAAGATGCTCGCCACATCCTGAGGTACTCACAGCTGTaGAGTAGGGGTTCTGAGCGCCAGTATTCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QDARHILRYSQL*SRGSERQYSQP Trigger: GGGCTGAGAATACTGGCGCTCAGAACCCCTACTCCACAGCTGTGAGTACCTCAGGATGTGGCGAGCATCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | AGGCAAGGAAAGGTGAACCTGAGGTACTCACAGCTGTaGAGTAGGGGTTCTGAGCGCCAGTATTCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RQGKVNLRYSQL*SRGSERQYSQP Trigger: GGGCTGAGAATACTGGCGCTCAGAACCCCTACTCCACAGCTGTGAGTACCTCAGGTTCACCTTTCCTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099304.4 |
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| CDS TCA 72 bp | GCCCTTCTGCCCTTCACACAAGAGCCTGTGAGCAACTaGGACTGGATTCTTGATTCCACTCAGTGCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: ALLPFTQEPVSN*DWILDSTQCSN Trigger: GTTGGAGCACTGAGTGGAATCAAGAATCCAGTCTCAGTTGCTCACAGGCTCTTGTGTGAAGGGCAGAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS GCA 72 bp | TGTGAACATTCTCTAGCCAGTATGGTGCGCACAAGATaGTCGCCACATCCTGAGGTACTCACAGCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CEHSLASMVRTR*SPHPEVLTAVE Trigger: CTCCACAGCTGTGAGTACCTCAGGATGTGGCGAGCATCTTGTGCGCACCATACTGGCTAGAGAATGTTCACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046656.9 ENSMUST00000110079.9 |
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| CDS GCA 72 bp | GTTTATCTTGGGAGGAGTCAGACTCTGAAGAACATCTaGATGACCGGAGAACGATCACTCCACCGAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: VYLGRSQTLKNI*MTGERSLHRAR Trigger: GCGTGCTCGGTGGAGTGATCGTTCTCCGGTCATGCAGATGTTCTTCAGAGTCTGACTCCTCCCAAGATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS TCA 72 bp | CTCCTTGACTGTTACTTTAGCAGCAGATGCCTGAGATaGTCTGGAAGGCAGTCCTTCTCCAGAATTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: LLDCYFSSRCLR*SGRQSFSRIHP Trigger: GGGATGAATTCTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAAAGTAACAGTCAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS GCA 72 bp | ACCAGCACAAAGCCCCCTCGTTTCTCCTTACAGGGCTaGTGTGTTTCTAACTCCTTGACTGTTACTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: TSTKPPRFSLQG*CVSNSLTVTLA Trigger: TGCTAAAGTAACAGTCAAGGAGTTAGAAACACAGCAGCCCTGTAAGGAGAAACGAGGGGGCTTTGTGCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | TTTTCCTTTGCGCTTGATTGTCGTCTTCTCTTCAGCTaGATGAAGTCTGTTTCCACCCTTTCTGCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FSFALDCRLLFS*MKSVSTLSASS Trigger: AGAGCTGGCAGAAAGGGTGGAAACAGACTTCATCCAGCTGAAGAGAAGACGACAATCAAGCGCAAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS TCA 72 bp | TCTAACTCCTTGACTGTTACTTTAGCAGCAGATGCCTaGGATGATCTGGAAGGCAGTCCTTCTCCAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: SNSLTVTLAADA*DDLEGSPSPEF Trigger: GAATTCTGGAGAAGGACTGCCTTCCAGATCATCTCAGGCATCTGCTGCTAAAGTAACAGTCAAGGAGTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS CCA 72 bp | GCTGACATATATCCCACGCACATGCTCTCTGTAGTATaGCTCCACAGAAATTCCACAAGCAGTGTCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ADIYPTHMLSVV*LHRNSTSSVCL Trigger: TAAACAGACACTGCTTGTGGAATTTCTGTGGAGCCATACTACAGAGAGCATGTGCGTGGGATATATGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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| CDS GCA 72 bp | CAACGGCTCCAAAGTTTAAGGACTTTCCATCCATTATaGTGGCATCACATTCAATCTCTCCTAAGAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: QRLQSLRTFHPL*WHHIQSLLRDL Trigger: TAAATCTCTTAGGAGAGATTGAATGTGATGCCAGCATAATGGATGGAAAGTCCTTAAACTTTGGAGCCGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046656.9 ENSMUST00000099304.4 ENSMUST00000110079.9 |
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