Pregenerated sensors for TASOR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040651Ensembl transcript IDs: ENSMUST00000022450.6, ENSMUST00000225139.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGGACTCAACCTGGGTGAACAAAGGAGCAAGAGAAGGAAGGACTaGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: SGLNLGEQRSKRRKD*DVRASPHPYSCCSA Trigger: TGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTCACCCAGGTTGAGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR GCA 90 bp | AGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTaGTGTTCAGCAGAGCTGAGAGCAATACTGGGAATGGTAAGACTC | + |
|
Preference number: 1 (lower is better) Translates to: RRKDWDVRASPHPYS*CSAELRAILGMVRL Trigger: GAGTCTTACCATTCCCAGTATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR CCA 90 bp | CCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTaGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGT | + |
|
Preference number: 1 (lower is better) Translates to: PANVLKPILRLLHCI*PVWCLPSAQTPFTC Trigger: ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR TCA 90 bp | CTGATTTTGGTCAGCCTGAAAGTCGCTATACGCATCCTGTTCTGCTaGATTGCTGCTCTCTCCTTCAGAGCATACTCTATCAATAGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LILVSLKVAIRILFC*IAALSFRAYSINRS Trigger: GCTCCTATTGATAGAGTATGCTCTGAAGGAGAGAGCAGCAATTCAGCAGAACAGGATGCGTATAGCGACTTTCAGGCTGACCAAAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR CCA 90 bp | AATATAGTGCGTCAGGATCTGCAAAGTCCACAATCCCTTAAAGCTTaGTCTTCTGCCACAAGGTCACTTAGTCACAACACTCACACTAGG | + |
|
Preference number: 1 (lower is better) Translates to: NIVRQDLQSPQSLKA*SSATRSLSHNTHTR Trigger: CCTAGTGTGAGTGTTGTGACTAAGTGACCTTGTGGCAGAAGACCAAGCTTTAAGGGATTGTGGACTTTGCAGATCCTGACGCACTATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR TCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGGGAATGGTAAGACTCTaGCTGTGTCTTCTCATGATC | + |
|
Preference number: 2 (lower is better) Translates to: KDWDVRASPHPYSCCSAEGMVRL*LCLLMI Trigger: GATCATGAGAAGACACAGTCAGAGTCTTACCATTCC...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTACACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTGTCCCCAGAAACGTCTaGTGCGTGAGAACATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AITLYLACVVLTLCSDTIVPRNV*CVRTLK Trigger: TTTTAATGTTCTCACGCACCAGACGTTTCTGGGGAC...AATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR CCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTTTCCACTTGATCCTTTaGTTTCTCCCGCCAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCFHLIL*FLPPIF Trigger: AAATATTGGCGGGAGAAACCAAAGGATCAAGTGGAA...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGAGAAACAAAAGGAGTTaGAAACGAATCTCATACCCT | + |
|
Preference number: 2 (lower is better) Translates to: KDWDVRASPHPYSCCSAERNKRS*KRISYP Trigger: AGGGTATGAGATTCGTTTCCAACTCCTTTTGTTTCT...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTACACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTTGCACATCAAGAGATaGCTGCAATTCAATTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: AITLYLACVVLTLCSDTILHIKR*LQFNLD Trigger: ATCCAAATTGAATTGCAGTCATCTCTTGATGTGCAA...AATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR GCA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATCCTGTTCTGCTGAATTaGTGCTCTCTCCTTCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TIPVVLIVENVLARQHPNPVLLN*CSLLQS Trigger: GCTCTGAAGGAGAGAGCAGCAATTCAGCAGAACAGG...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTACACAGGCAAAAATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGAAACAGACTTCAATTTaGAGCCCAAGTACAGGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PFTQAKINPANVLKPILRKQTSI*SPSTGN Trigger: GTTACCTGTACTTGGGCTTCAAATTGAAGTCTGTTT...CCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTATTTTTGCCTGTGTAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCCAATAGTGTTGATCTGTTCCACTTaGTCCTTTGGTTTCTCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: SHDLRALESRFHFRNPIVLICST*SFGFSR Trigger: GCGGGAGAAACCAAAGGATCAAGTGGAACAGATCAA...CACTATTGGATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTTCCCGCCAATATTTCTaGATGAACATTGCTGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: TLTVSSHDLRALESRFHFSRQYF*MNIAEY Trigger: GTATTCAGCAATGTTCATTCAGAAATATTGGCGGGA...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAAACAGACTTCAATTTaGAGCCCAAGTACAGGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: TLTVSSHDLRALESRFHFKQTSI*SPSTGN Trigger: GTTACCTGTACTTGGGCTTCAAATTGAAGTCTGTTT...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCCAATAGTGGTTCTGCTGAATTGCTaGTCTCTCCTTCAGAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: SHDLRALESRFHFRNPIVVLLNC*SLLQSI Trigger: TATGCTCTGAAGGAGAGAGCAGCAATTCAGCAGAAC...CACTATTGGATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR GCA 72 bp | ACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTaGTTCACCTCACCCTTATTCGTGCTGTTCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TKEQEKEGLGCS*FTSPLFVLFSR Trigger: TCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR TCA 72 bp | GTCAGCCTGAAAGTCGCTATACGCATCCTGTTCTGCTaGATTGCTGCTCTCTCCTTCAGAGCATACTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: VSLKVAIRILFC*IAALSFRAYSI Trigger: GATAGAGTATGCTCTGAAGGAGAGAGCAGCAATTCAGCAGAACAGGATGCGTATAGCGACTTTCAGGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR CCA 72 bp | CCTATCCTGAGGCTATTACACTGTATTTGGCCTGTGTaGTGCTTACCCTCTGCTCAGACACCATTTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PILRLLHCIWPV*CLPSAQTPFTC Trigger: ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGCCTCAGGATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR CCA 72 bp | CGTCAGGATCTGCAAAGTCCACAATCCCTTAAAGCTTaGTCTTCTGCCACAAGGTCACTTAGTCACAACACT | + |
|
Preference number: 3 (lower is better) Translates to: RQDLQSPQSLKA*SSATRSLSHNT Trigger: AGTGTTGTGACTAAGTGACCTTGTGGCAGAAGACCAAGCTTTAAGGGATTGTGGACTTTGCAGATCCTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR TCA 72 bp | GCAGAGCTGAGAGCAATACTGGGAATGGTAAGACTCTaGCTGTGTCTTCTCATGATCTTAGAGCACTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AELRAILGMVRL*LCLLMILEHLR Trigger: TCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGTCTTACCATTCCCAGTATTGCTCTCAGCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR GCA 72 bp | ATTACACTGTATTTGGCCTGTGTGGTGCTTACCCTCTaGTCAGACACCATTTACCTGTGTCCTTTAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ITLYLACVVLTL*SDTIYLCPLRA Trigger: AGCTCTTAAAGGACACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTACACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTAATTCTCCAATAGTATaGAAAGCAGAAGCTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: AITLYLACVVLTLCSDTINSPIV*KAEAPL Trigger: AAGTGGAGCTTCTGCTTTCAATACTATTGGAGAATT...AATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATGTTCCACTTGATCCTTaGGTTTCTCCCGCCAATATT | + |
|
Preference number: 3 (lower is better) Translates to: TIPVVLIVENVLARQHPNVPLDP*VSPANI Trigger: AATATTGGCGGGAGAAACCAAAGGATCAAGTGGAAC...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR TCA 72 bp | TGGTTTCTCCCGCCAATATTTCTGAATGAACATTGCTaGATACTTCTATATGTGAGATTTCATCCCCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: WFLPPIFLNEHC*ILLYVRFHPLN Trigger: ATTCAGGGGATGAAATCTCACATATAGAAGTATTCAGCAATGTTCATTCAGAAATATTGGCGGGAGAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR TCA 72 bp | TTAAGTTGGTTATATACCTTCACTAAAATATCAATGTaGTTGCAGGGTCTTCTCCAGAAACAAAAGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSWLYTFTKISM*LQGLLQKQKEL Trigger: CAACTCCTTTTGTTTCTGGAGAAGACCCTGCAATCACATTGATATTTTAGTGAAGGTATATAACCAACTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGAAAGGCCTCCACTGGTaGCAGGCACACCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAEKGLHW*QAHQLF Trigger: GAACAGCTGGTGTGCCTGCCACCAGTGGAGGCCTTT...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGACACTGCTCTTCCACTaGCATCGCCTGACCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAETLLFH*HRLTCC Trigger: ACAGCAGGTCAGGCGATGGCAGTGGAAGAGCAGTGT...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GGACTCAACCTGGGTGAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTCTCTTCCTGGGGATCTaGAAACTCCGCCTAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGEQRSKRRKDWDVRLFLGI*KLRLKG Trigger: GCCTTTTAGGCGGAGTTTTCAGATCCCCAGGAAGAG...ACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTCACCCAGGTTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTTGCCATCGCCTGACCTaGTGTTACAGTGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCCHRLT*CYSVLL Trigger: GAGGAGGACACTGTAACAGCAGGTCAGGCGATGGCA...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCCATGTTTCCCATGCTaGTCTTCTGGGCTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAEPCFPC*SSGLPA Trigger: TGCAGGAAGCCCAGAAGACCAGCATGGGAAACATGG...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGGTCTTCTGGGCTTCCTaGATTCCCTCCTGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAEVFWAS*IPSCNW Trigger: CCAATTACAGGAGGGAATGCAGGAAGCCCAGAAGAC...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATTCTAGGAAGCTCTGCTaGTGGCACACACTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNSRKLC*WHTLLF Trigger: GAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGA...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTCCTGTTCTGCTGAATTaGTGCTCTCTCCTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPPVLLN*CSLLQS Trigger: GCTCTGAAGGAGAGAGCAGCAATTCAGCAGAACAGG...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTCAGCTGTTCTCCTGGTaGTTTCATTCCTGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPQLFSW*FHSWCL Trigger: CAAACACCAGGAATGAAATCACCAGGAGAACAGCTG...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATAACAACATCGCCTACTaGCCCAGCCTCCAAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNNNIAY*PSLQRI Trigger: AATCCTTTGGAGGCTGGGGCAGTAGGCGATGTTGTT...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTTGTAGACGGAGAGGATaGGAACTGGTAATCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPCRRRG*ELVITA Trigger: AGCTGTGATTACCAGTTCCCATCCTCTCCGTCTACA...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR CAA 72 bp | TGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTaGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: CAETYPEAITLY*ACVVLTLCSDT Trigger: GGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTATTTCTCAGGAAGCTTaGCAGGTAGAAAGGCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPISQEA*QVERHD Trigger: ATCGTGCCTTTCTACCTGTCAAGCTTCCTGAGAAAT...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GGACTCAACCTGGGTGAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTCAGGCACCTTGTGAATaGAACCTGCAATGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGEQRSKRRKDWDVRQAPCE*NLQCLH Trigger: ATGAAGACATTGCAGGTTTCATTCACAAGGTGCCTG...ACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTCACCCAGGTTGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATAAGCCAGGCACCTTGTaGATGAAACCTGCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNKPGTL*MKPAMS Trigger: AGACATTGCAGGTTTCATTCACAAGGTGCCTGGCTT...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATTTCCCGGAATCTTCCTaGTGCACTCTCAAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNFPESS*CTLKLG Trigger: TCCTAACTTGAGAGTGCAGCAGGAAGATTCCGGGAA...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTCAGACACCATTTACCTGTGTCCTTTAAGAGCTTACATATAGCTAGCCACTCTAGGAAGCTCTaGTGCTGGCACACACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRHHLPVSFKSLHIASHSRKL*CWHTLL Trigger: GAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTG...GCTAGCTATATGTAAGCTCTTAAAGGACACAGGTAAATGGTGTCTGAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTGTTCTGCTGAATTGCTaGTCTCTCCTTCAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPVLLNC*SLLQSI Trigger: TATGCTCTGAAGGAGAGAGCAGCAATTCAGCAGAAC...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTCGTGACTTGACAGTCTaGTGTTCATATGGAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCRDLTV*CSYGET Trigger: GGTTTCTCCATATGAACATCAGACTGTCAAGTCACG...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTTTGACCTTCATAATCTaGCAGTGGACTAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQRSKRRKDWDVRASPHPLTFII*QWTKLL Trigger: CAGCAGTTTAGTCCACTGTCAGATTATGAAGGTCAA...AGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGACTCACACCCTTAGCTaGTGCTGTAATAACAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAETHTLS*CCNNNS Trigger: ACTGTTGTTATTACAGCATCAGCTAAGGGTGTGAGT...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAAGCTCCGGAAGCGCTaGCTTCATCCCGTCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTVSSHDLRALESRFHFKLRKR*LHPVVS Trigger: GGAGACGACGGGATGAAGCCAGCGCTTCCGGAGCTT...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATGCTTTTTGTATCTTCTaGATCTGGATCTCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNAFCIF*IWISTH Trigger: GTGGGTGGAGATCCAGATCCAGAAGATACAAAAAGC...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGTCCCCAGAAACGTCTaGTGCGTGAGAACATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRKDWDVRASPHPYSCCSVPRNV*CVRTLK Trigger: TTTTAATGTTCTCACGCACCAGACGTTTCTGGGGAC...TGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGGCTTATAAAATTTaGAAGTGCTGGTTGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAELAYKI*KCWLCR Trigger: TCTGCACAACCAGCACTTTCAAATTTTATAAGCCAG...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GGACTCAACCTGGGTGAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTTCCCGCCAATATTTCTaGATGAACATTGCTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGEQRSKRRKDWDVRSRQYF*MNIAEY Trigger: GTATTCAGCAATGTTCATTCAGAAATATTGGCGGGA...ACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTCACCCAGGTTGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATCTCAGGCTTCTCCAGTaGTGTTGTATTCATTATACC | + |
|
Preference number: 4 (lower is better) Translates to: CSCFTSPLFVLFSRAESNLRLLQ*CCIHYT Trigger: GGTATAATGAATACAACACCACTGGAGAAGCCTGAG...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTCCCATGCTGGTCTTCTaGGCTTCCTGCATTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTVSSHDLRALESRFHFPMLVF*ASCIPS Trigger: GGAGGGAATGCAGGAAGCCCAGAAGACCAGCATGGG...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GCTATTACACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTGGTACCGATCAACCATaGGAAATGCATAAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AITLYLACVVLTLCSDTIGTDQP*EMHKIL Trigger: CAGAATCTTATGCATTTCTCATGGTTGATCGGTACC...AATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTGTAATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTATCCTTTTTCACATATaGTCTGAACCTGGTACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCILFHI*SEPGTD Trigger: ATCGGTACCAGGTTCAGAGCATATGTGAAAAAGGAT...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTTCAACATTAACTCTTTaGAATGGTGTGGCCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCSTLTL*NGVADS Trigger: TGAATCGGCCACACCATTGCAAAGAGTTAATGTTGA...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTCTTTCGTGTTCATTCTaGCCAGTTCCTTTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCLSCSF*PVPLVS Trigger: AGAAACTAAAGGAACTGGGCAGAATGAACACGAAAG...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGAAAGTCTTCAGTAGTTaGAACGACAATTCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWDVRASPHPYSCCSAEKVFSS*NDNSIV Trigger: GACAATGGAATTGTCGTTGCAACTACTGAAGACTTT...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTAGTCTGATGTTCATATaGAGAAACCATCTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCSLMFI*RNHLER Trigger: CCTTTCCAGATGGTTTCTCCATATGAACATCAGACT...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| 3UTR CAA 72 bp | TTACCTGTGTCCTTTAAGAGCTTACATATAGCTAGCTaGAGCTCAGGACTCAACCTGGGTGAACAAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVSFKSLHIAS*SSGLNLGEQRS Trigger: GCTCCTTTGTTCACCCAGGTTGAGTCCTGAGCTCAAGCTAGCTATATGTAAGCTCTTAAAGGACACAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTAGCATTTCGAGTTTGTaGATCACAACTGTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCSISSL*ITTVIR Trigger: TCTTATCACAGTTGTGATTCACAAACTCGAAATGCT...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCATTATTTCTTTTTCTGTaGGTTCCAGGACTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRKDWDVRASPHPYSCCSLFLFL*VPGLYH Trigger: GTGATACAGTCCTGGAACCCACAGAAAAAGAAATAA...TGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTTCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | ATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTGGTTGATCTGTTCCACTTaGTCCTTTGGTTTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: INPANVLKPILRLLHCIWLICST*SFGFSR Trigger: GCGGGAGAAACCAAAGGATCAAGTGGAACAGATCAA...CCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGAAACGAATCTCATACCCTTAACTGCAAACCAAGAAGATAATTTTAGTAGGAAGCTCTGCTGCTaGCACACACTGCTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELETNLIPLTANQEDNFSRKLCC*HTLLFH Trigger: GTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCT...ACTAAAATTATCTTCTTGGTTTGCAGTTAAGGGTATGAGATTCGTTTCCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | CCTTTTACACAGGCAAAAATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGACTTTCTTCTGTAACTaGGTTGTGATAGCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFTQAKINPANVLKPILRTFFCN*VVIAHK Trigger: CTTGTGGGCTATCACAACTCAGTTACAGAAGAAAGT...CCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTATTTTTGCCTGTGTAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTGGTTGGATTGGCCCACCTaGAATCCTTTTTCACATATG | + |
|
Preference number: 4 (lower is better) Translates to: INPANVLKPILRLLHCIWLDWPT*NPFSHM Trigger: CATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAA...CCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTGGTACCCATGGAAGGACTaGCAAGAACTGTTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: INPANVLKPILRLLHCIWYPWKD*QELLFW Trigger: CCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTA...CCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATTCTAGCAATGGGCTCTaGGCATCCTTAAAATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TIPVVLIVENVLARQHPNSSNGL*ASLKCT Trigger: TGTGCATTTTAAGGATGCTCAGAGCCCATTGCTAGA...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTACTTTCTTCTGTAACTaGGTTGTGATAGCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTVSSHDLRALESRFHFTFFCN*VVIAHK Trigger: CTTGTGGGCTATCACAACTCAGTTACAGAAGAAAGT...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTTACACAGGCAAAAATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGTTGCACATCAAGAGATaGCTGCAATTCAATTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFTQAKINPANVLKPILRLHIKR*LQFNLD Trigger: ATCCAAATTGAATTGCAGTCATCTCTTGATGTGCAA...CCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTATTTTTGCCTGTGTAAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTGGCTCATAGGCTCTATATaGCAAGAGGGATGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: INPANVLKPILRLLHCIWLIGSI*QEGCNS Trigger: AGAATTACATCCCTCTTGGCATATAGAGCCTATGAG...CCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGAAACGAATCTCATACCCTTAACTGCAAACCAAGAAGATAATTTTAGTCAGAGAAGCCAATGCTaGTGCAGCATGGGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: ELETNLIPLTANQEDNFSQRSQC*CSMGMI Trigger: AATCATTCCCATGCTGCAGCAGCATTGGCTTCTCTG...ACTAAAATTATCTTCTTGGTTTGCAGTTAAGGGTATGAGATTCGTTTCCAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTTACACAGGCAAAAATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGAAAGTCTTCAGTAGTTaGAACGACAATTCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFTQAKINPANVLKPILRKVFSS*NDNSIV Trigger: GACAATGGAATTGTCGTTGCAACTACTGAAGACTTT...CCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTATTTTTGCCTGTGTAAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGCTATTACACTGTATTTGGAGCATTTCGAGTTTGTaGATCACAACTGTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: INPANVLKPILRLLHCIWSISSL*ITTVIR Trigger: TCTTATCACAGTTGTGATTCACAAACTCGAAATGCT...CCAAATACAGTGTAATAGCCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTCTTTCGTGTTCATTCTaGCCAGTTCCTTTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTVSSHDLRALESRFHFLSCSF*PVPLVS Trigger: AGAAACTAAAGGAACTGGGCAGAATGAACACGAAAG...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CCA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATCAAGAACTGTTATTTTaGATTGGCCCACCTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TIPVVLIVENVLARQHPNQELLF*IGPPAI Trigger: GATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTG...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGTACTAAGCCAAAATCCTATAAATATTTACACTGCTGGCTTATACCTGAAAGATAGATACCCATaGAAGGACTGCCAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVLSQNPINIYTAGLYLKDRYP*KDCQEL Trigger: CAGTTCTTGGCAGTCCTTCCATGGGTATCTATCTTT...CAGGTATAAGCCAGCAGTGTAAATATTTATAGGATTTTGGCTTAGTACCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCAGTGGATTTTCCATTaGCATTTCCCTTCTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVSSHDLRALESRFHFRNQWIFH*HFPSGV Trigger: TACTCCAGAAGGGAAATGGCAATGGAAAATCCACTG...ATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGTACTAAGCCAAAATCCTATAAATATTTACACTGCTGGCTTATACCTGACTGTTATTTTGGATTaGCCCACCTGCAATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVLSQNPINIYTAGLYLTVILD*PTCNPF Trigger: AAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGT...CAGGTATAAGCCAGCAGTGTAAATATTTATAGGATTTTGGCTTAGTACCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGTACTAAGCCAAAATCCTATAAATATTTACACTGCTGGCTTATACCTGTGTATCTTCTGGATCTaGATCTCCACCCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVLSQNPINIYTAGLYLCIFWI*ISTHIF Trigger: AAAAATGTGGGTGGAGATCCAGATCCAGAAGATACA...CAGGTATAAGCCAGCAGTGTAAATATTTATAGGATTTTGGCTTAGTACCTCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTGACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTTTCCTAGAGAAAAGATaGAACTCTCCTAACACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLTVSSHDLRALESRFHFFLEKR*NSPNTV Trigger: TACAGTGTTAGGAGAGTTCCATCTTTTCTCTAGGAA...AAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGTCAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATTTGCCATTTCCCTTCTaGAGTACTAAGTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIPVVLIVENVLARQHPNLPFPF*STKFFK Trigger: CTTGAAGAACTTAGTACTCCAGAAGGGAAATGGCAA...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGAAACGAATCTCATACCCTTAACTGCAAACCAAGAAGATAATTTTAGTCATCTTCTCTTGTGCTaGAAAGATAGGTGTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELETNLIPLTANQEDNFSHLLLC*KDRCGN Trigger: ATTTCCACACCTATCTTTTCAGCACAAGAGAAGATG...ACTAAAATTATCTTCTTGGTTTGCAGTTAAGGGTATGAGATTCGTTTCCAACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGTACTAAGCCAAAATCCTATAAATATTTACACTGCTGGCTTATACCTGAGTAAAAGACACAACTaGATACGGACAAACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEVLSQNPINIYTAGLYLSKRHN*IRTNMS Trigger: AGACATGTTTGTCCGTATGCAGTTGTGTCTTTTACT...CAGGTATAAGCCAGCAGTGTAAATATTTATAGGATTTTGGCTTAGTACCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | TCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCCAATAGTGATGACATTCATGTTTTaGGGTAGGGTCCAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SHDLRALESRFHFRNPIVMTFMF*GRVQSI Trigger: AATGCTTTGGACCCTACCCCAAAACATGAATGTCAT...CACTATTGGATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGTACTAAGCCAAAATCCTATAAATATTTACACTGCTGGCTTATACCTGGCTGTTAGATCTCAATaGAGACAAAAACTTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEVLSQNPINIYTAGLYLAVRSQ*RQKLWS Trigger: ACTCCAAAGTTTTTGTCTCCATTGAGATCTAACAGC...CAGGTATAAGCCAGCAGTGTAAATATTTATAGGATTTTGGCTTAGTACCTCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR TCA 90 bp | TCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCCAATAGTGCATTTCTACTTCCACTaGAGAGGAATACTGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SHDLRALESRFHFRNPIVHFYFH*RGILFI Trigger: AATGAACAGTATTCCTCTTCAGTGGAAGTAGAAATG...CACTATTGGATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATTCTTTAAAACTTCATTaGGACCCACATATGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIPVVLIVENVLARQHPNSLKLH*DPHMCL Trigger: AAGACACATATGTGGGTCCCAATGAAGTTTTAAAGA...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATCAACTGATACATTTCTaGCTGGTAAATGTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TVSSHDLRALESRFHFRNQLIHF*LVNVGM Trigger: CATACCTACATTTACCAGCCAGAAATGTATCAGTTG...ATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | GGTTTGCTGAGGCTGCTCGTGGCCGTAGCTCCGGGCGGCTTCAGCTaGCGCGGTCTCCTCAGGCCCCGCGCCGCCGCCGCCGTCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLRLLVAVAPGGFS*RGLLRPRAAAAVAA Trigger: GGCGGCGACGGCGGCGGCGGCGCGGGGCCTGAGGAGACCGCGGCAGCTGAAGCCGCCCGGAGCTACGGCCACGAGCAGCCTCAGCAAACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | GCTCACTCTAGGAAGCTCTGCTGCTGGCACACACTGCTCTTCCACTaGCATCGCCTGACCTGCTGTTACAGTGTCCTCCTCGGTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHSRKLCCWHTLLFH*HRLTCCYSVLLGSA Trigger: GGCACTACCGAGGAGGACACTGTAACAGCAGGTCAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTGAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 90 bp | GGAAGCTCTGCTGCTGGCACACACTGCTCTTCCACTGCCATCGCCTaGCCTGCTGTTACAGTGTCCTCCTCGGTAGTGCCTTTTAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSAAGTHCSSTAIA*PAVTVSSSVVPFRV Trigger: CACTCTAAAAGGCACTACCGAGGAGGACACTGTAACAGCAGGTCAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CCA 90 bp | CACTGTATTTTCTGTAATCTCGCTCACTCTAGGAAGCTCTGCTGCTaGCACACACTGCTCTTCCACTGCCATCGCCTGACCTGCTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: HCIFCNLAHSRKLCC*HTLLFHCHRLTCCY Trigger: GTAACAGCAGGTCAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTGAGCGAGATTACAGAAAATACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | GGACTCAACCTGGGTGAACAAAGGAGCAAGAGAAGGAAGGACTGGGATGTTCGTAGTCACTTGAGGAAATaGACACAACACGCCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGEQRSKRRKDWDVRSHLRK*TQHAFP Trigger: TGGGAAGGCGTGTTGTGTCAATTTCCTCAAGTGACT...ACGAACATCCCAGTCCTTCCTTCTCTTGCTCCTTTGTTCACCCAGGTTGAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 90 bp | TCAGCTCTTCATAGGCACCACTACTACTCAATCCTAAAGCCTTGTTaGCTGTCTCGGTCAGGAATCCGTCTGAGTGTCGTGCATTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SALHRHHYYSILKPC*LSRSGIRLSVVHLL Trigger: TAGCAAATGCACGACACTCAGACGGATTCCTGACCGAGACAGTCAACAAGGCTTTAGGATTGAGTAGTAGTGGTGCCTATGAAGAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | CCTGGTGATTTCATTCCTGGTGTTTGTTTCTCACCATGTTTCCCATaGTGGTCTTCTGGGCTTCCTGCATTCCCTCCTGTAATTGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: PGDFIPGVCFSPCFP*WSSGLPAFPPVIGI Trigger: GATTCCAATTACAGGAGGGAATGCAGGAAGCCCAGAAGACCAGCATGGGAAACATGGTGAGAAACAAACACCAGGAATGAAATCACCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | CACTGTATTTGGCCTGTGTGGTGCTTACCCTCTGCTCAGACACCATTTACCTGTAACTGTTATTTTGGATaGGCCCACCTGCAATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HCIWPVWCLPSAQTPFTCNCYFG*AHLQSF Trigger: AAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTT...ACAGGTAAATGGTGTCTGAGCAGAGGGTAAGCACCACACAGGCCAAATACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CCA 90 bp | GGTGATTTCATTCCTGGTGTTTGTTTCTCACCATGTTTCCCATGCTaGTCTTCTGGGCTTCCTGCATTCCCTCCTGTAATTGGAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GDFIPGVCFSPCFPC*SSGLPAFPPVIGIN Trigger: ATTGATTCCAATTACAGGAGGGAATGCAGGAAGCCCAGAAGACCAGCATGGGAAACATGGTGAGAAACAAACACCAGGAATGAAATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | AAGGACTGGGATGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGGATGGCAACTTTCAGTaGAATTACTTGTTTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KDWDVRASPHPYSCCSAEDGNFQ*NYLFWQ Trigger: TTGCCAAAACAAGTAATTCAACTGAAAGTTGCCATC...CTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACATCCCAGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | CCACAAGGTCACTTAGTCACAACACTCACACTAGGTGTGAGTGTCCAGATAATCGTCAACATTAACTCTTaGCAATGGTGTGGCCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: PQGHLVTTLTLGVSVQIIVNINS*QWCGRF Trigger: GAATCGGCCACACCATTGCAAAGAGTTAATGTTGAC...GATTATCTGGACACTCACACCTAGTGTGAGTGTTGTGACTAAGTGACCTTGTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | TGTTCGTGCTTCACCTCACCCTTATTCGTGCTGTTCAGCAGAGCTGAGAGCAATTACTCCTTTATTTCTTaGCAAAGCACACTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSCFTSPLFVLFSRAESNYSFIS*QSTLSS Trigger: AGAGGAGAGTGTGCTTTGCAAAGAAATAAAGGAGTA...ATTGCTCTCAGCTCTGCTGAACAGCACGAATAAGGGTGAGGTGAAGCACGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTCAGACACCATTTACCTGTGTCCTTTAAGAGCTTACATATAGCTAGCTTTGATCTGTTCCACTaGATCCTTTGGTTTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLLRHHLPVSFKSLHIASFDLFH*ILWFLP Trigger: CGGGAGAAACCAAAGGATCAAGTGGAACAGATCAAA...GCTAGCTATATGTAAGCTCTTAAAGGACACAGGTAAATGGTGTCTGAGCAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS TCA 90 bp | ATTTCTTTTTCTGTGGGTTCCAGGACTGTATCACCAGGTACAGTGTaGTCAGAAGTCAACATTAACTCTTTGCAATGGTGTGGCCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: ISFSVGSRTVSPGTV*SEVNINSLQWCGRF Trigger: GAATCGGCCACACCATTGCAAAGAGTTAATGTTGACTTCTGATCACACTGTACCTGGTGATACAGTCCTGGAACCCACAGAAAAAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 90 bp | GTTCTCATTAGCACCAAGCAGCGGCGGAAGACTTTCTTCTGTAACTaGGTTGTGATAGCCCACAAGACTTGTAAAGTTTTGCATAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLISTKQRRKTFFCN*VVIAHKTCKVLHKV Trigger: GACTTTATGCAAAACTTTACAAGTCTTGTGGGCTATCACAACTCAGTTACAGAAGAAAGTCTTCCGCCGCTGCTTGGTGCTAATGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS GCA 90 bp | GTAAGAGATCTGCATACCTACAAAGATAGATACCCATGGAAGGACTaGCAAGAACTGTTATTTTGGATTGGCCCACCTGCAATCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRDLHTYKDRYPWKD*QELLFWIGPPAILF Trigger: AAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTATCTATCTTTGTAGGTATGCAGATCTCTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | CTGTATCACCAGGTACAGTGTGATCAGAAGTCAACATTAACTCTTTaGAATGGTGTGGCCGATTCATTTCTACTTCCACTGAAGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LYHQVQCDQKSTLTL*NGVADSFLLPLKRN Trigger: ATTCCTCTTCAGTGGAAGTAGAAATGAATCGGCCACACCATTGCAAAGAGTTAATGTTGACTTCTGATCACACTGTACCTGGTGATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CCA 90 bp | TACAAAGATAGATACCCATGGAAGGACTGCCAAGAACTGTTATTTTaGATTGGCCCACCTGCAATCCTTTTTCACATATGCTCTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: YKDRYPWKDCQELLF*IGPPAILFHICSEP Trigger: AGGTTCAGAGCATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTATCTATCTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTTACACAGGCAAAAATAAACCCTGCTAATGTGCTGAAACCTATCCTGAGGACGGACAAACATGTCTaGGTCTTCGTCTTACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFTQAKINPANVLKPILRTDKHV*VFVLLH Trigger: ATGAAGTAAGACGAAGACCAAGACATGTTTGTCCGT...CCTCAGGATAGGTTTCAGCACATTAGCAGGGTTTATTTTTGCCTGTGTAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | GTCTCTTCATCATCATTTGACTTAGAATGTTGTCTAAGGAATCCATaGTCAATAGAAACCGTGGGACAGAGACTGCACCCTTCAAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSSSFDLECCLRNP*SIETVGQRLHPSKL Trigger: TAATTTTGAAGGGTGCAGTCTCTGTCCCACGGTTTCTATTGAGCATGGATTCCTTAGACAACATTCTAAGTCAAATGATGATGAAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 90 bp | CTGAAGCCTAATAAGGCAGTCCATTTCTGGAGCATTTCGAGTTTGTaGATCACAACTGTGATAAGACAAAATCTCAACCAGATGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKPNKAVHFWSISSL*ITTVIRQNLNQMFL Trigger: AAGAAACATCTGGTTGAGATTTTGTCTTATCACAGTTGTGATTCACAAACTCGAAATGCTCCAGAAATGGACTGCCTTATTAGGCTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTCTTCTCATGATCTTAGAGCACTTGAGAGTAGATTTCACTTTAGAAATGTTCCACTTGATCCTTaGGTTTCTCCCGCCAATATT | + |
|
Preference number: 5 (lower is better) Translates to: TVSSHDLRALESRFHFRNVPLDP*VSPANI Trigger: AATATTGGCGGGAGAAACCAAAGGATCAAGTGGAAC...ATTTCTAAAGTGAAATCTACTCTCAAGTGCTCTAAGATCATGAGAAGACACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225139.2 |
||
| CDS GCA 90 bp | GCCATACTCATAAAAATAATACTGAGTAAGCTCATAGGCTCTATATaGCAAGAGGGATGTAATTCTACTGGCATTTTTAGACACATGACA | + |
|
Preference number: 5 (lower is better) Translates to: AILIKIILSKLIGSI*QEGCNSTGIFRHMT Trigger: TGTCATGTGTCTAAAAATGCCAGTAGAATTACATCCCTCTTGGCATATAGAGCCTATGAGCTTACTCAGTATTATTTTTATGAGTATGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 90 bp | ATAGCCCACAAGACTTGTAAAGTTTTGCATAAAGTCTTCAGTAGTTaGAACGACAATTCCATTGTCTGTATAACTGGAAACCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IAHKTCKVLHKVFSS*NDNSIVCITGNHLD Trigger: ATCAAGATGGTTTCCAGTTATACAGACAATGGAATTGTCGTTGCAACTACTGAAGACTTTATGCAAAACTTTACAAGTCTTGTGGGCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS-3UTR CAA 90 bp | ACTATCCCTGTTGTTCTCATAGTAGAAAATGTTCTAGCTAGACAACACCCAAATTTCTTTAAAACTTCATaGGGACCCACATATGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TIPVVLIVENVLARQHPNFFKTS*GPTYVS Trigger: AGACACATATGTGGGTCCCAATGAAGTTTTAAAGAA...ATTTGGGTGTTGTCTAGCTAGAACATTTTCTACTATGAGAACAACAGGGATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 72 bp | GCCTTTGGGCAGAGCGGCCGCGGCCGCTTCGGAGGTTaGCTGAGGCTGCTCGTGGCCGTAGCTCCGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AFGQSGRGRFGG*LRLLVAVAPGG Trigger: GCCGCCCGGAGCTACGGCCACGAGCAGCCTCAGCAAACCTCCGAAGCGGCCGCGGCCGCTCTGCCCAAAGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 90 bp | CTCTTCGGCGCCTTTGGGCAGAGCGGCCGCGGCCGCTTCGGAGGTTaGCTGAGGCTGCTCGTGGCCGTAGCTCCGGGCGGCTTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFGAFGQSGRGRFGG*LRLLVAVAPGGFSC Trigger: GCAGCTGAAGCCGCCCGGAGCTACGGCCACGAGCAGCCTCAGCAAACCTCCGAAGCGGCCGCGGCCGCTCTGCCCAAAGGCGCCGAAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | GCTGCTGGCACACACTGCTCTTCCACTGCCATCGCCTaGCCTGCTGTTACAGTGTCCTCCTCGGTAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGTHCSSTAIA*PAVTVSSSVVP Trigger: AGGCACTACCGAGGAGGACACTGTAACAGCAGGTCAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | CTTCCCAGAGAAGCCAATGCTGCTGCAGCATGGGAATaGTTAGCGCTAACTGCTGGCGGCAAACTCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: LPREANAAAAWE*LALTAGGKLTP Trigger: GGGTGTGAGTTTGCCGCCAGCAGTTAGCGCTAATCATTCCCATGCTGCAGCAGCATTGGCTTCTCTGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CCA 72 bp | TTCTGTAATCTCGCTCACTCTAGGAAGCTCTGCTGCTaGCACACACTGCTCTTCCACTGCCATCGCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: FCNLAHSRKLCC*HTLLFHCHRLT Trigger: GGTCAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTGAGCGAGATTACAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 72 bp | TTGTGGATGTCCCCAGTGTTCCCGGAATCTTCCTGCTaGACTCTCAAGTTAGGATCCTGTCCAAGTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWMSPVFPESSC*TLKLGSCPSKP Trigger: TGGCTTACTTGGACAGGATCCTAACTTGAGAGTGCAGCAGGAAGATTCCGGGAACACTGGGGACATCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 72 bp | TGTATTTTCTGTAATCTCGCTCACTCTAGGAAGCTCTaGTGCTGGCACACACTGCTCTTCCACTGCCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: CIFCNLAHSRKL*CWHTLLFHCHR Trigger: GCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTGAGCGAGATTACAGAAAATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | CATAGGCACCACTACTACTCAATCCTAAAGCCTTGTTaGCTGTCTCGGTCAGGAATCCGTCTGAGTGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HRHHYYSILKPC*LSRSGIRLSVV Trigger: CACGACACTCAGACGGATTCCTGACCGAGACAGTCAACAAGGCTTTAGGATTGAGTAGTAGTGGTGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 72 bp | CTGTCTCGGTCAGGAATCCGTCTGAGTGTCGTGCATTaGCTAGTGCTTCCGATAGCCAATTATAAAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRSGIRLSVVH*LVLPIANYKAC Trigger: ACAAGCTTTATAATTGGCTATCGGAAGCACTAGCAAATGCACGACACTCAGACGGATTCCTGACCGAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | AGCACCAAGCAGCGGCGGAAGACTTTCTTCTGTAACTaGGTTGTGATAGCCCACAAGACTTGTAAAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: STKQRRKTFFCN*VVIAHKTCKVL Trigger: CAAAACTTTACAAGTCTTGTGGGCTATCACAACTCAGTTACAGAAGAAAGTCTTCCGCCGCTGCTTGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS GCA 72 bp | CTGCATACCTACAAAGATAGATACCCATGGAAGGACTaGCAAGAACTGTTATTTTGGATTGGCCCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHTYKDRYPWKD*QELLFWIGPPA Trigger: TGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTATCTATCTTTGTAGGTATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 72 bp | ACCCATGGAAGGACTGCCAAGAACTGTTATTTTGGATaGGCCCACCTGCAATCCTTTTTCACATATGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: THGRTAKNCYFG*AHLQSFFTYAL Trigger: CAGAGCATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CCA 72 bp | AGATACCCATGGAAGGACTGCCAAGAACTGTTATTTTaGATTGGCCCACCTGCAATCCTTTTTCACATATGC | + |
|
Preference number: 6 (lower is better) Translates to: RYPWKDCQELLF*IGPPAILFHIC Trigger: GCATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 72 bp | CTCATAACTGTTTCAACATCCAATTTCTCAGGAAGCTaGACAGGTAGAAAGGCACGATTGGCGGACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LITVSTSNFSGS*TGRKARLADLK Trigger: TTTGAGGTCCGCCAATCGTGCCTTTCTACCTGTCAAGCTTCCTGAGAAATTGGATGTTGAAACAGTTATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS CAA 90 bp | AAGATAGATACCCATGGAAGGACTGCCAAGAACTGTTATTTTGGATaGGCCCACCTGCAATCCTTTTTCACATATGCTCTGAACCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KIDTHGRTAKNCYFG*AHLQSFFTYALNLV Trigger: TACCAGGTTCAGAGCATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGTATCTATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 72 bp | CAGGTACAGTGTGATCAGAAGTCAACATTAACTCTTTaGAATGGTGTGGCCGATTCATTTCTACTTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QVQCDQKSTLTL*NGVADSFLLPL Trigger: CAGTGGAAGTAGAAATGAATCGGCCACACCATTGCAAAGAGTTAATGTTGACTTCTGATCACACTGTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS GCA 72 bp | GAAGAGTCAGCAGACTCAGAGCTTTCGTGTTCATTCTaGCCAGTTCCTTTAGTTTCTTCTGGAATTTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: EESADSELSCSF*PVPLVSSGIYS Trigger: ACTGTAAATTCCAGAAGAAACTAAAGGAACTGGGCAGAATGAACACGAAAGCTCTGAGTCTGCTGACTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS TCA 72 bp | CTTGAAACAGAAATAAAGCATGTAGGATTCGTGACTTaGCAGTCTGATGTTCATATGGAGAAACCATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LETEIKHVGFVT*QSDVHMEKPSG Trigger: TCCAGATGGTTTCTCCATATGAACATCAGACTGTCAAGTCACGAATCCTACATGCTTTATTTCTGTTTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | AATAAGGCAGTCCATTTCTGGAGCATTTCGAGTTTGTaGATCACAACTGTGATAAGACAAAATCTCAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: NKAVHFWSISSL*ITTVIRQNLNQ Trigger: CTGGTTGAGATTTTGTCTTATCACAGTTGTGATTCACAAACTCGAAATGCTCCAGAAATGGACTGCCTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022450.6 ENSMUST00000225139.2 |
||
| CDS CCA 72 bp | AGTAAAAGACACAACTGCATACGGACAAACATGTCTTaGTCTTCGTCTTACTTCATCAAAGCCATACTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SKRHNCIRTNMS*SSSYFIKAILI Trigger: TATGAGTATGGCTTTGATGAAGTAAGACGAAGACCAAGACATGTTTGTCCGTATGCAGTTGTGTCTTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||
| CDS TCA 72 bp | TTTCACATATGCTCTGAACCTGGTACCGATCAACCATaGGAAATGCATAAGATTCTGAAAGTTCCTTATCTA | + |
|
Preference number: 6 (lower is better) Translates to: FHICSEPGTDQP*EMHKILKVPYL Trigger: TAGATAAGGAACTTTCAGAATCTTATGCATTTCTCATGGTTGATCGGTACCAGGTTCAGAGCATATGTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022450.6 |
||