Pregenerated sensors for TASL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025058Ensembl transcript IDs: ENSMUST00000113976.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCTTGTTCCTCAGGTGATTCTGTTACGCTCTATCAGCAGACCTaGGGGACTAGCTCTCTTCTGAGTTTCAGTGGTCAGAGCACTCAC | + |
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Preference number: 1 (lower is better) Translates to: RACSSGDSVTLYQQT*GTSSLLSFSGQSTH Trigger: GTGAGTGCTCTGACCACTGAAACTCAGAAGAGAGCTAGTCCCCCAGGTCTGCTGATAGAGCGTAACAGAATCACCTGAGGAACAAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 90 bp | GACCTGTGGCCATCAGTCAAGGTATGCACCTTGCACTTAGACGCTTaGGAACAGACGCCTACTCACTTGTTTCAATTTGGAACTATTTTG | + |
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Preference number: 1 (lower is better) Translates to: DLWPSVKVCTLHLDA*EQTPTHLFQFGTIL Trigger: CAAAATAGTTCCAAATTGAAACAAGTGAGTAGGCGTCTGTTCTCAAGCGTCTAAGTGCAAGGTGCATACCTTGACTGATGGCCACAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTaGGTCATTAGTTGTGGGACTATGAGAGGCAGCCTGGTTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RMIVENLAGCGCNGL*VISCGTMRGSLVSG Trigger: ACCAGAAACCAGGCTGCCTCTCATAGTCCCACAACTAATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 90 bp | CTTGAGAACAGACGCCTACTCACTTGTTTCAATTTGGAACTATTTTaGAGATTCACCCTAACTCTTTCTGGTAACATCTGGATTTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LENRRLLTCFNLELF*RFTLTLSGNIWICF Trigger: GAAGCAAATCCAGATGTTACCAGAAAGAGTTAGGGTGAATCTTCAAAATAGTTCCAAATTGAAACAAGTGAGTAGGCGTCTGTTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 90 bp | AAATCCATCGACTTTCTAGTTTGCCATAGTGTTTCCTTTTGTTCCTaGTTTGGCTTAACTTCCAGTTTCAGAACTCCTAAAATTGAATCA | + |
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Preference number: 1 (lower is better) Translates to: KSIDFLVCHSVSFCS*FGLTSSFRTPKIES Trigger: TGATTCAATTTTAGGAGTTCTGAAACTGGAAGTTAAGCCAAATCAGGAACAAAAGGAAACACTATGGCAAACTAGAAAGTCGATGGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGCAAGACACTGTCATTaGACAGAGTTGGCAAACATC | + |
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Preference number: 2 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHARHCH*TELANI Trigger: GATGTTTGCCAACTCTGTTCAATGACAGTGTCTTGC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTTGCAGGAAAGGTTCACGACCTTAGCCTGCACTaGAATGGTAGGCCTTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QWSEHSLHASSPLAGKVHDLSLH*NGRPFS Trigger: GGAAAAAGGCCTACCATTCCAGTGCAGGCTAAGGTC...GTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGGTAACATCTGGATTTaGTTCCCTCATTCCATCACA | + |
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Preference number: 2 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHGNIWI*FPHSIT Trigger: TGTGATGGAATGAGGGAAGCAAATCCAGATGTTACC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCAGCCTGGTTTCTGGTTaGGCTAGGTTTAAAACCCCG | + |
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Preference number: 2 (lower is better) Translates to: SSPLAGKVHRYLAIRSASSLVSG*ARFKTP Trigger: CGGGGTTTTAAACCTAGCTCAACCAGAAACCAGGCT...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTTAGTTGTGGGACTATaGGAGGCAGCCTGGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSPLAGKVHRYLAIRSASLVVGL*EAAWFL Trigger: CAGAAACCAGGCTGCCTCTCATAGTCCCACAACTAA...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGTTCCTTTCCATATGTaGTTTCTCAAAGTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHVPFHM*FLKVSF Trigger: AAAGGACACTTTGAGAAATCACATATGGAAAGGAAC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTTGCAGGAAAGGTTCACGTCCTTTCGAAAGTCTaGTTCCTGGAAAACCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: QWSEHSLHASSPLAGKVHVLSKV*FLENLN Trigger: ATTTAGGTTTTCCAGGAAGCAGACTTTCGAAAGGAC...GTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCGGAGTTCCAGACAGCTaGAGCTATACAATAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSPLAGKVHRYLAIRSASGVPDS*SYTIKR Trigger: CCTCTTTATTGTATAGCTCCAGCTGTCTGGAACTCC...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCGTTTCCTTTTGTTCCTaGTTTGGCTTAACTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSPLAGKVHRYLAIRSASVSFCS*FGLTSS Trigger: ACTGGAAGTTAAGCCAAATCAGGAACAAAAGGAAAC...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCCTTTTGTTCCTGATTTaGCTTAACTTCCAGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSPLAGKVHRYLAIRSASLLFLI*LNFQFQ Trigger: CTGAAACTGGAAGTTAAGCCAAATCAGGAACAAAAG...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CAA 90 bp | CAATGTCCTTTCGAAAGTCTGCTTCCTGGAAAACCTAAATCAAGTTaGGGCAAGACACTGTCATTGAACAGAGTTGGCAAACATCACTGT | + |
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Preference number: 2 (lower is better) Translates to: QCPFESLLPGKPKSS*GKTLSLNRVGKHHC Trigger: ACAGTGATGTTTGCCAACTCTGTTCAATGACAGTGTCTTGCCCAAACTTGATTTAGGTTTTCCAGGAAGCAGACTTTCGAAAGGACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTCAGAAGACCCTTTTCTaGCTCCAGGTCAGAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: RMIVENLAGCGCNGLWVIQKTLF*LQVRRT Trigger: TGTTCTTCTGACCTGGAGCCAGAAAAGGGTCTTCTG...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTATACAAGCTTATACTTaGAAAAATGTCAGTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: RMIVENLAGCGCNGLWVIIQAYT*KNVSPP Trigger: AGGTGGACTGACATTTTTCCAAGTATAAGCTTGTAT...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CAA 90 bp | TTAGTAAACAAATATACAGAAATTGAAATTATGGAGTCCTTGGTCTaGTATAGAACAATCAGAAGACCCTTTTCTGGCTCCAGGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LVNKYTEIEIMESLV*YRTIRRPFSGSRSE Trigger: TTCTGACCTGGAGCCAGAAAAGGGTCTTCTGATTGTTCTATACAAGACCAAGGACTCCATAATTTCAATTTCTGTATATTTGTTTACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CCA 72 bp | AACCCCGGTAACCCAGCAGGTGACCTTAGCCTGCACTaGAATGGTAGGCCTTTTTCCATGCTCCTAGACACC | + |
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Preference number: 3 (lower is better) Translates to: NPGNPAGDLSLH*NGRPFSMLLDT Trigger: GGTGTCTAGGAGCATGGAAAAAGGCCTACCATTCCAGTGCAGGCTAAGGTCACCTGCTGGGTTACCGGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 72 bp | AGTTGTGGGACTATGAGAGGCAGCCTGGTTTCTGGTTaGGCTAGGTTTAAAACCCCGGTAACCCAGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: SCGTMRGSLVSG*ARFKTPVTQQV Trigger: CACCTGCTGGGTTACCGGGGTTTTAAACCTAGCTCAACCAGAAACCAGGCTGCCTCTCATAGTCCCACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CAA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGGCAAGACACTGTCATaGAACAGAGTTGGCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHGKTLS*NRVGKH Trigger: ATGTTTGCCAACTCTGTTCAATGACAGTGTCTTGCC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 72 bp | GATATCTGGCAATCAGATCTGCCTCCTGGCAGAAGATaGGAACCTGAAACAGGGTCTGTCCCGGAAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: DIWQSDLPPGRR*EPETGSVPEAV Trigger: AACAGCTTCCGGGACAGACCCTGTTTCAGGTTCTCATCTTCTGCCAGGAGGCAGATCTGATTGCCAGATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CCA 72 bp | TCCTCAGGTGATTCTGTTACGCTCTATCAGCAGACCTaGGGGACTAGCTCTCTTCTGAGTTTCAGTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SSGDSVTLYQQT*GTSSLLSFSGQ Trigger: CTGACCACTGAAACTCAGAAGAGAGCTAGTCCCCCAGGTCTGCTGATAGAGCGTAACAGAATCACCTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR GCA 72 bp | TGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTaGCTCCTGGCAGAAGATGAGAACCTGAAACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: CRKGSQISGNQI*LLAEDENLKQG Trigger: ACCCTGTTTCAGGTTCTCATCTTCTGCCAGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTTGCAGGAAAGGTTCACAAACCTAAATCAAGTTaGGGCAAGACACTGTCATTG | + |
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Preference number: 3 (lower is better) Translates to: QWSEHSLHASSPLAGKVHKPKSS*GKTLSL Trigger: CAATGACAGTGTCTTGCCCAAACTTGATTTAGGTTT...GTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CCA 72 bp | GTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTaGGTCATTAGTTGTGGGACTATGAGAGGCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: VENLAGCGCNGL*VISCGTMRGSL Trigger: CAGGCTGCCTCTCATAGTCCCACAACTAATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 72 bp | CCATCAGTCAAGGTATGCACCTTGCACTTAGACGCTTaGGAACAGACGCCTACTCACTTGTTTCAATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: PSVKVCTLHLDA*EQTPTHLFQFG Trigger: TCCAAATTGAAACAAGTGAGTAGGCGTCTGTTCTCAAGCGTCTAAGTGCAAGGTGCATACCTTGACTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CCA 72 bp | GATATAATGGCACATGCCCTTAATCCTCCTAGCATGTaGGAAGCACAGGCAGACAAATCTCTGTGTGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: DIMAHALNPPSM*EAQADKSLCVR Trigger: TCTAACACACAGAGATTTGTCTGCCTGTGCTTCCCACATGCTAGGAGGATTAAGGGCATGTGCCATTATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTGAAATTATGGAGTCCTaGGTCTTGTATAGAACAATC | + |
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Preference number: 3 (lower is better) Translates to: ALLLQERFTDIWQSDLPPEIMES*VLYRTI Trigger: GATTGTTCTATACAAGACCAAGGACTCCATAATTTC...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTCTTGCACTTAGACGCTaGAGAACAGACGCCTACTCA | + |
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Preference number: 3 (lower is better) Translates to: RMIVENLAGCGCNGLWVILALRR*RTDAYS Trigger: TGAGTAGGCGTCTGTTCTCAAGCGTCTAAGTGCAAG...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 72 bp | GAAAACCTAAATCAAGTTTGGGCAAGACACTGTCATTaGACAGAGTTGGCAAACATCACTGTAAACAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ENLNQVWARHCH*TELANITVNSQ Trigger: CTGGCTGTTTACAGTGATGTTTGCCAACTCTGTTCAATGACAGTGTCTTGCCCAAACTTGATTTAGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR TCA 72 bp | AGACGCCTACTCACTTGTTTCAATTTGGAACTATTTTaGAGATTCACCCTAACTCTTTCTGGTAACATCTGG | + |
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Preference number: 3 (lower is better) Translates to: RRLLTCFNLELF*RFTLTLSGNIW Trigger: CCAGATGTTACCAGAAAGAGTTAGGGTGAATCTTCAAAATAGTTCCAAATTGAAACAAGTGAGTAGGCGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTTCAGAACTCCTAAAATaGAATCACAGTACCTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RMIVENLAGCGCNGLWVISELLK*NHSTFL Trigger: AAGGAAGGTACTGTGATTCAATTTTAGGAGTTCTGA...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTTGCAGGAAAGGTTCACTTCTGCTCTGGCTTCTaGTGTGCTGACTCGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QWSEHSLHASSPLAGKVHFCSGF*CADSPL Trigger: CAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAA...GTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTTGCAGGAAAGGTTCACCCTGCAGCACTGTTCTaGTCTGGCTTCTGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QWSEHSLHASSPLAGKVHPAALF*SGFCCA Trigger: AGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGG...GTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTGGCTTCTGCTGTGCTaGCTCGCCCTTGCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASWLLLC*LALACT Trigger: AGTGCATGCAAGGGCGAGTCAGCACAGCAGAAGCCA...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCGGGTTGCTGTTTGCCTaGAGCACTGTTCTGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASGLLFA*STVLLW Trigger: CCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCC...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGACCATCTTCAAAGCTaGTCTCAGAGGGGAAATTTG | + |
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Preference number: 4 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHDHLQS*SQRGNL Trigger: CAAATTTCCCCTCTGAGAGCAGCTTTGAAGATGGTC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR CCA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTCTTGTCTCTTTGCCTTaGTCCCCAGCCACCGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ALLLQERFTDIWQSDLPPLVSLP*SPATGS Trigger: TGAACCGGTGGCTGGGGACCAAGGCAAAGAGACAAG...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR TCA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTGGTGCTGATCTCAGATaGTACCAACTGCAACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALLLQERFTDIWQSDLPPGADLR*YQLQQV Trigger: CACCTGTTGCAGTTGGTATCATCTGAGATCAGCACC...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACTTTGAAATAGGCTTCTaGATTTGCAGGCTGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHFEIGF*ICRLLF Trigger: GAAAAGCAGCCTGCAAATGCAGAAGCCTATTTCAAA...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCCCAAGTAGGTCTCCCTaGTCACATCTCTGCATATAC | + |
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Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASPSRSP*SHLCIY Trigger: GTATATGCAGAGATGTGATCAGGGAGACCTACTTGG...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCAATTCCACCACCTTCTaGTCCAGGTACTCATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASNSTTF*SRYSLS Trigger: GCTCAATGAGTACCTGGAGCAGAAGGTGGTGGAATT...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CAA 72 bp | AGTGGTCAGAGCACTCACTGCATGCAAGCTCTCCTCTaGCAGGAAAGGTTCACAGATATCTGGCAATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGQSTHCMQALL*QERFTDIWQSD Trigger: ATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCTTGCATGCAGTGAGTGCTCTGACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTTTCAAATACAGGGTTaGTGTTTGCCTGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASFQIQG*CLPAAL Trigger: CAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAA...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| 3UTR CAA 72 bp | GCCATCAGTCAAGGTATGCACCTTGCACTTAGACGCTaGAGAACAGACGCCTACTCACTTGTTTCAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: AISQGMHLALRR*RTDAYSLVSIW Trigger: CCAAATTGAAACAAGTGAGTAGGCGTCTGTTCTCAAGCGTCTAAGTGCAAGGTGCATACCTTGACTGATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCGTAGGAGAACTGTCATaGAACACAGTGTCCATAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLAGKVHRYLAIRSASVGELS*NTVSII Trigger: TATTATGGACACTGTGTTTCATGACAGTTCTCCTAC...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS-3UTR TCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTGGAAGTTCAGTGAGCTaGGTGGAAGTGGAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMIVENLAGCGCNGLWVIGSSVS*VEVESS Trigger: GGAGGATTCCACTTCCACTCAGCTCACTGAACTTCC...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTGTGTCCATAATATATTaGTTATACAATTCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQERFTDIWQSDLPPVSIIY*LYNSTT Trigger: GGTGGTGGAATTGTATAAGCAATATATTATGGACAC...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTTATCCTCCAGTAGGATaGGTACCGCTGGATAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RMIVENLAGCGCNGLWVIYPPVG*VPLDRF Trigger: AAACCTATCCAGCGGTACTCATCCTACTGGAGGATA...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGATAGTAGAAAATTTGGCTGGGTGTGGATGTAATGGACTTTGGGTCATTCGTCATGATGAATTCTaGTGCCAGAATCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RMIVENLAGCGCNGLWVIRHDEF*CQNLGR Trigger: CCTACCCAGATTCTGGCATCAGAATTCATCATGACG...AATGACCCAAAGTCCATTACATCCACACCCAGCCAAATTTTCTACTATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| 3UTR CAA 72 bp | GGAAAACCTAAATCAAGTTTGGGCAAGACACTGTCATaGAACAGAGTTGGCAAACATCACTGTAAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPKSSLGKTLS*NRVGKHHCKQP Trigger: TGGCTGTTTACAGTGATGTTTGCCAACTCTGTTCAATGACAGTGTCTTGCCCAAACTTGATTTAGGTTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| 3UTR CAA 72 bp | TTCGAAAGTCTGCTTCCTGGAAAACCTAAATCAAGTTaGGGCAAGACACTGTCATTGAACAGAGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FESLLPGKPKSS*GKTLSLNRVGK Trigger: TTTGCCAACTCTGTTCAATGACAGTGTCTTGCCCAAACTTGATTTAGGTTTTCCAGGAAGCAGACTTTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR TCA 90 bp | AGAATTCCCTCCATCACATCCTCTGATCAAATTAATACAATAGTGCCTTGGGATATCCACAGAGGAATATaGAAGAGCAGCAACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RIPSITSSDQINTIVPWDIHRGI*KSSNRT Trigger: AGTTCTGTTGCTGCTCTTTCATATTCCTCTGTGGAT...ATCCCAAGGCACTATTGTATTAATTTGATCAGAGGATGTGATGGAGGGAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR GCA 90 bp | AGAATTCCCTCCATCACATCCTCTGATCAAATTAATACAATAGTGCCTTGGGATCGGTTCATTATAAGATaGACAATTCCAATGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RIPSITSSDQINTIVPWDRFIIR*TIPMNV Trigger: GACATTCATTGGAATTGTGCATCTTATAATGAACCG...ATCCCAAGGCACTATTGTATTAATTTGATCAGAGGATGTGATGGAGGGAATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| 3UTR CAA 72 bp | AAATATACAGAAATTGAAATTATGGAGTCCTTGGTCTaGTATAGAACAATCAGAAGACCCTTTTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIEIMESLV*YRTIRRPFSGS Trigger: GGAGCCAGAAAAGGGTCTTCTGATTGTTCTATACAAGACCAAGGACTCCATAATTTCAATTTCTGTATATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 90 bp | TTGGACTTTCAAATACAGGGTTGCTGTTTGCCTGCAGCACTGTTCTaGTCTGGCTTCTGCTGTGCTGACTCGCCCTTGCATGCACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LDFQIQGCCLPAALF*SGFCCADSPLHALM Trigger: CATCAGTGCATGCAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 90 bp | TTGCTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGTGCTaGCTCGCCCTTGCATGCACTGATGAAATAAACTTCCCAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFACSTVLLWLLLC*LALACTDEINFPED Trigger: ATCCTCTGGGAAGTTTATTTCATCAGTGCATGCAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCGAGCAGCAACAGAACTaGTCTCTTTGCCTTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPLAGKVHRYLAIRSASEQQQN*SLCLGP Trigger: GGGACCAAGGCAAAGAGACAAGTTCTGTTGCTGCTC...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACGCTCACATAAAGACTTaGAACTTGTGTTTCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHAHIKT*NLCFIH Trigger: GTGGATGAAACACAAGTTCAAAGTCTTTATGTGAGC...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 90 bp | TTGCAGGCTGCTTTTCTCTTTGATGCTGGTTATCCTCCAGTAGGATaGGTACCGCTGGATAGGTTTGAGGGGAAGTTCAGTGAGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LQAAFLFDAGYPPVG*VPLDRFEGKFSELS Trigger: ACTCAGCTCACTGAACTTCCCCTCAAACCTATCCAGCGGTACTCATCCTACTGGAGGATAACCAGCATCAAAGAGAAAAGCAGCCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTCCTAGACACCAGGCTCCTGACCAGAGGCTGCAGCTATTCACTCCACATAAAGACTTTGAACTaGTGTTTCATCCACAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SMLLDTRLLTRGCSYSLHIKTLN*CFIHRG Trigger: TCCTCTGTGGATGAAACACAAGTTCAAAGTCTTTAT...GTGGAGTGAATAGCTGCAGCCTCTGGTCAGGAGCCTGGTGTCTAGGAGCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTCTTTCAAATACAGGGTaGCTGTTTGCCTGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ALLLQERFTDIWQSDLPPLSNTG*LFACST Trigger: AGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAG...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 90 bp | TGCATATACCAACTGCAGCTAAAGTTGGACTTTCAAATACAGGGTTaGTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CIYQLQLKLDFQIQG*CLPAALFCSGFCCA Trigger: AGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTGGTATATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | AGAATTCCCTCCATCACATCCTCTGATCAAATTAATACAATAGTGCCTTGGGATACTTGTCTCTTTGCCTaGGTCCCCAGCCACCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIPSITSSDQINTIVPWDTCLFA*VPSHRF Trigger: GAACCGGTGGCTGGGGACCAAGGCAAAGAGACAAGT...ATCCCAAGGCACTATTGTATTAATTTGATCAGAGGATGTGATGGAGGGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCTCAACTGCAGCTAAAGTaGGACTTTCAAATACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLLQERFTDIWQSDLPPQLQLK*DFQIQG Trigger: ACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTG...AGGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 90 bp | ACTTGTCTCTTTGCCTTGGTCCCCAGCCACCGGTTCATTATAAGATaGACAATTCCAATGAATGTCATTCCAGTAGGTAAGTCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TCLFALVPSHRFIIR*TIPMNVIPVGKSTE Trigger: CTCAGTGGACTTACCTACTGGAATGACATTCATTGGAATTGTGCATCTTATAATGAACCGGTGGCTGGGGACCAAGGCAAAGAGACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTCCTCTTGCAGGAAAGGTTCACAGATATCTGGCAATCAGATCTGCCTCCCTAATAACTATGTCCTaGACTTTTGAAGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPLAGKVHRYLAIRSASLITMS*TFEVSR Trigger: CCTGGACACTTCAAAAGTCAAGGACATAGTTATTAG...GGAGGCAGATCTGATTGCCAGATATCTGTGAACCTTTCCTGCAAGAGGAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 90 bp | AACACAGTGTCCATAATATATTGCTTATACAATTCCACCACCTTCTaGTCCAGGTACTCATTGAGCACTGCATTTGAAATAGGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTVSIIYCLYNSTTF*SRYSLSTAFEIGFC Trigger: GCAGAAGCCTATTTCAAATGCAGTGCTCAATGAGTACCTGGAGCAGAAGGTGGTGGAATTGTATAAGCAATATATTATGGACACTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 90 bp | TTTTGCAAATACTTTTACAAGAAGGTGGAACCAAGTAGGTCTCCCTaGTCACATCTCTGCATATACCAACTGCAGCTAAAGTTGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCKYFYKKVEPSRSP*SHLCIYQLQLKLDF Trigger: AAAGTCCAACTTTAGCTGCAGTTGGTATATGCAGAGATGTGATCAGGGAGACCTACTTGGTTCCACCTTCTTGTAAAAGTATTTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 90 bp | GTCATGATGAATTCTGATGCCAGAATCTGGGTAGGAGAACTGTCATaGAACACAGTGTCCATAATATATTGCTTATACAATTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VMMNSDARIWVGELS*NTVSIIYCLYNSTT Trigger: GGTGGTGGAATTGTATAAGCAATATATTATGGACACTGTGTTTCATGACAGTTCTCCTACCCAGATTCTGGCATCAGAATTCATCATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 90 bp | AGACACTTGAAGACTAATTTGATCTACATTCGTCATGATGAATTCTaGTGCCAGAATCTGGGTAGGAGAACTGTCATGAAACACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHLKTNLIYIRHDEF*CQNLGRRTVMKHSV Trigger: GACACTGTGTTTCATGACAGTTCTCCTACCCAGATTCTGGCATCAGAATTCATCATGACGAATGTAGATCAAATTAGTCTTCAAGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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| CDS TCA 90 bp | ATTGCTATACTGAGAAATATGAAGACTAGGGGTGCTGATCTCAGATaGTACCAACTGCAACAGGTGGCTAATAACTATGTCCTTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: IAILRNMKTRGADLR*YQLQQVANNYVLDF Trigger: AAAGTCAAGGACATAGTTATTAGCCACCTGTTGCAGTTGGTATCATCTGAGATCAGCACCCCTAGTCTTCATATTTCTCAGTATAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS-3UTR CAA 90 bp | AGAATTCCCTCCATCACATCCTCTGATCAAATTAATACAATAGTGCCTTGGGATTGCTCCAGGTACTCATaGAGCACTGCATTTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: RIPSITSSDQINTIVPWDCSRYS*STAFEI Trigger: TATTTCAAATGCAGTGCTCAATGAGTACCTGGAGCA...ATCCCAAGGCACTATTGTATTAATTTGATCAGAGGATGTGATGGAGGGAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 72 bp | TGCTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTTCTaGTGTGCTGACTCGCCCTTGCATGCACTGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CCLPAALFCSGF*CADSPLHALMK Trigger: TTTCATCAGTGCATGCAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 72 bp | CAAATACAGGGTTGCTGTTTGCCTGCAGCACTGTTCTaGTCTGGCTTCTGCTGTGCTGACTCGCCCTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QIQGCCLPAALF*SGFCCADSPLH Trigger: ATGCAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | GCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGTGCTaGCTCGCCCTTGCATGCACTGATGAAATAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACSTVLLWLLLC*LALACTDEINF Trigger: GAAGTTTATTTCATCAGTGCATGCAAGGGCGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 90 bp | TACCAACTGCAGCTAAAGTTGGACTTTCAAATACAGGGTTGCTGTTaGCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGTGCTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: YQLQLKLDFQIQGCC*PAALFCSGFCCADS Trigger: CGAGTCAGCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 90 bp | CTGCATATACCAACTGCAGCTAAAGTTGGACTTTCAAATACAGGGTaGCTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LHIPTAAKVGLSNTG*LFACSTVLLWLLLC Trigger: GCACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTGGTATATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 72 bp | CAACTGCAGCTAAAGTTGGACTTTCAAATACAGGGTTaGTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QLQLKLDFQIQG*CLPAALFCSGF Trigger: GAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 72 bp | CAGCTAAAGTTGGACTTTCAAATACAGGGTTGCTGTTaGCCTGCAGCACTGTTCTGCTCTGGCTTCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLKLDFQIQGCC*PAALFCSGFCC Trigger: ACAGCAGAAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 72 bp | CCAACTGCAGCTAAAGTTGGACTTTCAAATACAGGGTaGCTGTTTGCCTGCAGCACTGTTCTGCTCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTAAKVGLSNTG*LFACSTVLLWL Trigger: AAGCCAGAGCAGAACAGTGCTGCAGGCAAACAGCAACCCTGTATTTGAAAGTCCAACTTTAGCTGCAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | TTCAAAGCTGCTCTCAGAGGGGAAATTTGCCATTACTaGGTTAATGGCCATCACCTGTCCCCCTGCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: FKAALRGEICHY*VNGHHLSPCNM Trigger: CATATTGCAGGGGGACAGGTGATGGCCATTAACTCAGTAATGGCAAATTTCCCCTCTGAGAGCAGCTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 90 bp | CTTGTGTTTCATCCACAGAGGAATATGAAAGAGCAGCAACAGAACTaGTCTCTTTGCCTTGGTCCCCAGCCACCGGTTCATTATAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVFHPQRNMKEQQQN*SLCLGPQPPVHYKM Trigger: CATCTTATAATGAACCGGTGGCTGGGGACCAAGGCAAAGAGACAAGTTCTGTTGCTGCTCTTTCATATTCCTCTGTGGATGAAACACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | TACTTTTACAAGAAGGTGGAACCAAGTAGGTCTCCCTaGTCACATCTCTGCATATACCAACTGCAGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: YFYKKVEPSRSP*SHLCIYQLQLK Trigger: CTTTAGCTGCAGTTGGTATATGCAGAGATGTGATCAGGGAGACCTACTTGGTTCCACCTTCTTGTAAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | CTGAGAAATATGAAGACTAGGGGTGCTGATCTCAGATaGTACCAACTGCAACAGGTGGCTAATAACTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRNMKTRGADLR*YQLQQVANNYV Trigger: GACATAGTTATTAGCCACCTGTTGCAGTTGGTATCATCTGAGATCAGCACCCCTAGTCTTCATATTTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 90 bp | ATATATTGCTTATACAATTCCACCACCTTCTGCTCCAGGTACTCATaGAGCACTGCATTTGAAATAGGCTTCTGCATTTGCAGGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IYCLYNSTTFCSRYS*STAFEIGFCICRLL Trigger: AAGCAGCCTGCAAATGCAGAAGCCTATTTCAAATGCAGTGCTCAATGAGTACCTGGAGCAGAAGGTGGTGGAATTGTATAAGCAATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | CTGCAACAGGTGGCTAATAACTATGTCCTTGACTTTTaGAGTGTCCAGGTTCTTCTCTTTAGACACTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQQVANNYVLDF*SVQVLLFRHLK Trigger: CTTCAAGTGTCTAAAGAGAAGAACCTGGACACTTCAAAAGTCAAGGACATAGTTATTAGCCACCTGTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 72 bp | GATACCAACTGCAACAGGTGGCTAATAACTATGTCCTaGACTTTTGAAGTGTCCAGGTTCTTCTCTTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DTNCNRWLITMS*TFEVSRFFSLD Trigger: GTCTAAAGAGAAGAACCTGGACACTTCAAAAGTCAAGGACATAGTTATTAGCCACCTGTTGCAGTTGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS CAA 90 bp | AATCTGGGTAGGAGAACTGTCATGAAACACAGTGTCCATAATATATaGCTTATACAATTCCACCACCTTCTGCTCCAGGTACTCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NLGRRTVMKHSVHNI*LIQFHHLLLQVLIE Trigger: CTCAATGAGTACCTGGAGCAGAAGGTGGTGGAATTGTATAAGCAATATATTATGGACACTGTGTTTCATGACAGTTCTCCTACCCAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS TCA 72 bp | AAGACTAATTTGATCTACATTCGTCATGATGAATTCTaGTGCCAGAATCTGGGTAGGAGAACTGTCATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KTNLIYIRHDEF*CQNLGRRTVMK Trigger: TTTCATGACAGTTCTCCTACCCAGATTCTGGCATCAGAATTCATCATGACGAATGTAGATCAAATTAGTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
||
| CDS GCA 72 bp | TCCATAATATATTGCTTATACAATTCCACCACCTTCTaGTCCAGGTACTCATTGAGCACTGCATTTGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SIIYCLYNSTTF*SRYSLSTAFEI Trigger: TATTTCAAATGCAGTGCTCAATGAGTACCTGGAGCAGAAGGTGGTGGAATTGTATAAGCAATATATTATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113976.2 |
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