Pregenerated sensors for TAS2R138 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058250Ensembl transcript IDs: ENSMUST00000076565.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGCAGCCAGCCAGAGGCTCACTTGGTTTGCAATCATCCAGAGAGTaGGGATGGCTTGGTAGTTGTGGCTCAGTGGGTCTTTCATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RQPARGSLGLQSSRE*GWLGSCGSVGLSSA Trigger: AGCAGATGAAAGACCCACTGAGCCACAACTACCAAGCCATCCTCACTCTCTGGATGATTGCAAACCAAGTGAGCCTCTGGCTGGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS CCA 90 bp | TGCAATCATCCAGAGAGTGAGGATGGCTTGGTAGTTGTGGCTCAGTaGGTCTTTCATCTGCTGGAAGCAGGCGAGCTGAATAGCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: CNHPESEDGLVVVAQ*VFHLLEAGELNSIQ Trigger: CTGGATGCTATTCAGCTCGCCTGCTTCCAGCAGATGAAAGACCCACTGAGCCACAACTACCAAGCCATCCTCACTCTCTGGATGATTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS CCA 90 bp | AAGCATCTGAAGAAATCTCCTGGAGACCCAGCTTGCTACATGGAGTaGAAAGGTGTGAGAGAAGCGGACAATCTTGGAGCAGTAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: KHLKKSPGDPACYME*KGVREADNLGAVEE Trigger: CTCCTCTACTGCTCCAAGATTGTCCGCTTCTCTCACACCTTTCCACTCCATGTAGCAAGCTGGGTCTCCAGGAGATTTCTTCAGATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS TCA 90 bp | AGGGCAGTGCAGATGCAGGAGAGAAGAAGAACAACTAGAAGCATCTaGAGAAATCTCCTGGAGACCCAGCTTGCTACATGGAGTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RAVQMQERRRTTRSI*RNLLETQLATWSGK Trigger: CTTTCCACTCCATGTAGCAAGCTGGGTCTCCAGGAGATTTCTTCAGATGCTTCTAGTTGTTCTTCTTCTCTCCTGCATCTGCACTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS TCA 72 bp | CTCAGTGGGTCTTTCATCTGCTGGAAGCAGGCGAGCTaGATAGCATCCAGAAGCAGAAGGCCCTGCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSGSFICWKQAS*IASRSRRPCRK Trigger: TTTCCTGCAGGGCCTTCTGCTTCTGGATGCTATTCAGCTCGCCTGCTTCCAGCAGATGAAAGACCCACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS TCA 72 bp | CATGGTCTCTATGGCCCTCCTCAGCTTAGCATTGCCTaGTATCAGGATGGCTGCATGTCCCGAAGGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: HGLYGPPQLSIA*YQDGCMSRRTS Trigger: GCTTGTCCTTCGGGACATGCAGCCATCCTGATATCAGGCAATGCTAAGCTGAGGAGGGCCATAGAGACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS CAA 90 bp | CCAGAGGCTCACTTGGTTTGCAATCATCCAGAGAGTGAGGATGGCTaGGTAGTTGTGGCTCAGTGGGTCTTTCATCTGCTGGAAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PEAHLVCNHPESEDG*VVVAQWVFHLLEAG Trigger: GCCTGCTTCCAGCAGATGAAAGACCCACTGAGCCACAACTACCAAGCCATCCTCACTCTCTGGATGATTGCAAACCAAGTGAGCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS CAA 72 bp | AATAGCATGGTCTCTATGGCCCTCCTCAGCTTAGCATaGCCTGATATCAGGATGGCTGCATGTCCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: NSMVSMALLSLA*PDIRMAACPEG Trigger: TCCTTCGGGACATGCAGCCATCCTGATATCAGGCAATGCTAAGCTGAGGAGGGCCATAGAGACCATGCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS CAA 72 bp | CACTTGGTTTGCAATCATCCAGAGAGTGAGGATGGCTaGGTAGTTGTGGCTCAGTGGGTCTTTCATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HLVCNHPESEDG*VVVAQWVFHLL Trigger: CAGCAGATGAAAGACCCACTGAGCCACAACTACCAAGCCATCCTCACTCTCTGGATGATTGCAAACCAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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| CDS GCA 72 bp | ATTGCAGAAGATAAACGAGTAAAAGAAATTGAGTTTTaGAATTTGCAAACTGAATTCTGTGCTGTTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: IAEDKRVKEIEF*NLQTEFCAVQV Trigger: CACCTGAACAGCACAGAATTCAGTTTGCAAATTGCAAAACTCAATTTCTTTTACTCGTTTATCTTCTGCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076565.3 |
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