Pregenerated sensors for TAS2R135 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056203Ensembl transcript IDs: ENSMUST00000070178.5
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TACCTATCACCACACATTGGAGACAGAATCGAGAGGCTGCTAGACTaGTCAGTAACTTATTATGAGCTGACAGTGTTCTCCGGAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: YLSPHIGDRIERLLD*SVTYYELTVFSGAT Trigger: GGTTGCTCCGGAGAACACTGTCAGCTCATAATAAGTTACTGATCAGTCTAGCAGCCTCTCGATTCTGTCTCCAATGTGTGGTGATAGGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CCA 90 bp | CAATTTTCACACAATAGAAGAAACCTAGCAAAGAACAGAGCCAGATaGTTGCAGCAGTCAAGAAGTCCCACATTAAATTTAGGAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: QFSHNRRNLAKNRAR*LQQSRSPTLNLGAV Trigger: TACAGCTCCTAAATTTAATGTGGGACTTCTTGACTGCTGCAACCATCTGGCTCTGTTCTTTGCTAGGTTTCTTCTATTGTGTGAAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS TCA 90 bp | AAAAGAAGTAGAATTTCTCAAGTGAGTGTCTTAAGCTATTCCCAGTaGCATTCCAAGGTTGATGGCCACTCTTTGCATGGTTCTGATATA | + |
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Preference number: 5 (lower is better) Translates to: KRSRISQVSVLSYSQ*HSKVDGHSLHGSDI Trigger: TATATCAGAACCATGCAAAGAGTGGCCATCAACCTTGGAATGTCACTGGGAATAGCTTAAGACACTCACTTGAGAAATTCTACTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CCA 72 bp | ACGATGAAGGAGAGCAGAGGAAGAAGAGCCTTGAAATaGGCCTGTGCCCAGACATCCCGAAGTTCTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TMKESRGRRALK*ACAQTSRSSER Trigger: CCTTTCAGAACTTCGGGATGTCTGGGCACAGGCCCATTTCAAGGCTCTTCTTCCTCTGCTCTCCTTCATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS TCA 72 bp | CCACACATTGGAGACAGAATCGAGAGGCTGCTAGACTaGTCAGTAACTTATTATGAGCTGACAGTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PHIGDRIERLLD*SVTYYELTVFS Trigger: GGAGAACACTGTCAGCTCATAATAAGTTACTGATCAGTCTAGCAGCCTCTCGATTCTGTCTCCAATGTGTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CAA 72 bp | CAGCAGCCCCTCTTTATCACCACTCTCAAAACAGGGTaGCTGAAGAGTATAACAATGGGATGTATCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: QQPLFITTLKTG*LKSITMGCITV Trigger: CACAGTGATACATCCCATTGTTATACTCTTCAGCAACCCTGTTTTGAGAGTGGTGATAAAGAGGGGCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS TCA 72 bp | AAGAGTATAACAATGGGATGTATCACTGTGCACAGATaGATCACCACCTGCCACATCCAGTACCTGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: KSITMGCITVHR*ITTCHIQYLNS Trigger: GGAATTCAGGTACTGGATGTGGCAGGTGGTGATTCATCTGTGCACAGTGATACATCCCATTGTTATACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CAA 90 bp | CAGGCAACCTGTACTTTAGCCAGACAAAGACAGGATGGGTTAAGGTaGCAATTTTCACACAATAGAAGAAACCTAGCAAAGAACAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: QATCTLARQRQDGLR*QFSHNRRNLAKNRA Trigger: GGCTCTGTTCTTTGCTAGGTTTCTTCTATTGTGTGAAAATTGCAACCTTAACCCATCCTGTCTTTGTCTGGCTAAAGTACAGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS TCA 72 bp | AGAATTTCTCAAGTGAGTGTCTTAAGCTATTCCCAGTaGCATTCCAAGGTTGATGGCCACTCTTTGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: RISQVSVLSYSQ*HSKVDGHSLHG Trigger: ACCATGCAAAGAGTGGCCATCAACCTTGGAATGTCACTGGGAATAGCTTAAGACACTCACTTGAGAAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CAA 72 bp | TGTACTTTAGCCAGACAAAGACAGGATGGGTTAAGGTaGCAATTTTCACACAATAGAAGAAACCTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: CTLARQRQDGLR*QFSHNRRNLAK Trigger: CTTTGCTAGGTTTCTTCTATTGTGTGAAAATTGCAACCTTAACCCATCCTGTCTTTGTCTGGCTAAAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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| CDS CAA 90 bp | CCCACATTAAATTTAGGAGCTGTATTACAGGGTTGTATGGGAAGCTaGTTGGATTCAGGAAAACATAAATATTCTTACCTATCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: PTLNLGAVLQGCMGS*LDSGKHKYSYLSPH Trigger: GTGTGGTGATAGGTAAGAATATTTATGTTTTCCTGAATCCAACAAGCTTCCCATACAACCCTGTAATACAGCTCCTAAATTTAATGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070178.5 |
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