Pregenerated sensors for TAS2R118 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043865Ensembl transcript IDs: ENSMUST00000062463.4
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GAGATGCCCAGGCTGATGAGAATCGTCTCCACCGGTGACAGTCTTTaGAAGTGCATCCACTCTCTGAATAGCACTGCAACCGTTGTGCAA | + |
Preference number: 5 (lower is better) Translates to: EMPRLMRIVSTGDSL*KCIHSLNSTATVVQ Trigger: TTGCACAACGGTTGCAGTGCTATTCAGAGAGTGGATGCACTTTCAAAGACTGTCACCGGTGGAGACGATTCTCATCAGCCTGGGCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |
||
CDS TCA 90 bp | GAATCGTCTCCACCGGTGACAGTCTTTGAAAGTGCATCCACTCTCTaGATAGCACTGCAACCGTTGTGCAACTTTGCACAATTATTACTA | + |
Preference number: 5 (lower is better) Translates to: ESSPPVTVFESASTL*IALQPLCNFAQLLL Trigger: TAGTAATAATTGTGCAAAGTTGCACAACGGTTGCAGTGCTATTCAGAGAGTGGATGCACTTTCAAAGACTGTCACCGGTGGAGACGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |
||
CDS GCA 90 bp | AAGTGCATCCACTCTCTGAATAGCACTGCAACCGTTGTGCAACTTTaGACAATTATTACTAAGGACTCAAGCACATACATGATGATGGAG | + |
Preference number: 5 (lower is better) Translates to: KCIHSLNSTATVVQL*TIITKDSSTYMMME Trigger: CTCCATCATCATGTATGTGCTTGAGTCCTTAGTAATAATTGTGCAAAGTTGCACAACGGTTGCAGTGCTATTCAGAGAGTGGATGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |
||
CDS TCA 72 bp | AGGCTGATGAGAATCGTCTCCACCGGTGACAGTCTTTaGAAGTGCATCCACTCTCTGAATAGCACTGCAACC | + |
Preference number: 6 (lower is better) Translates to: RLMRIVSTGDSL*KCIHSLNSTAT Trigger: GGTTGCAGTGCTATTCAGAGAGTGGATGCACTTTCAAAGACTGTCACCGGTGGAGACGATTCTCATCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |
||
CDS GCA 72 bp | CACTCTCTGAATAGCACTGCAACCGTTGTGCAACTTTaGACAATTATTACTAAGGACTCAAGCACATACATG | + |
Preference number: 6 (lower is better) Translates to: HSLNSTATVVQL*TIITKDSSTYM Trigger: CATGTATGTGCTTGAGTCCTTAGTAATAATTGTGCAAAGTTGCACAACGGTTGCAGTGCTATTCAGAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |
||
CDS TCA 72 bp | CATCTGGATGTGATATTTAACAACAGAAGGGATGATTaGCAAACAAGAAGCTATCAGAGCACCCAGTATCAA | + |
Preference number: 6 (lower is better) Translates to: HLDVIFNNRRDD*QTRSYQSTQYQ Trigger: TTGATACTGGGTGCTCTGATAGCTTCTTGTTTGTCAATCATCCCTTCTGTTGTTAAATATCACATCCAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062463.4 |