Pregenerated sensors for TAS2R116 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030194Ensembl transcript IDs: ENSMUST00000032315.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGACCCAGGAGTGCACTGACGGAAAAGCTGTTCTTGCAACCTGTGTaGTCAAAAGCAGGAGTGTCCTCTCCAGAAGCAGAGCACTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GPRSALTEKLFLQPV*SKAGVSSPEAEHSK Trigger: TTTGGAGTGCTCTGCTTCTGGAGAGGACACTCCTGCTTTTGATCACACAGGTTGCAAGAACAGCTTTTCCGTCAGTGCACTCCTGGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS GCA 90 bp | GACAGGAAGAAAATGGAATACAGGAGGAGGGAGGCAATCAATGTCTaGAAGGCTCTGATGTGGGCCTTAGTGCTGGCATCTCTGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: DRKKMEYRRREAINV*KALMWALVLASLHP Trigger: TGGATGCAGAGATGCCAGCACTAAGGCCCACATCAGAGCCTTGCAGACATTGATTGCCTCCCTCCTCCTGTATTCCATTTTCTTCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS TCA 90 bp | CTTTCTCATCTTAGCATTGCCCAGAATCAGGACCCAGGAGTGCACTaGCGGAAAAGCTGTTCTTGCAACCTGTGTGATCAAAAGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LSHLSIAQNQDPGVH*RKSCSCNLCDQKQE Trigger: CTCCTGCTTTTGATCACACAGGTTGCAAGAACAGCTTTTCCGTCAGTGCACTCCTGGGTCCTGATTCTGGGCAATGCTAAGATGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS GCA 90 bp | GAAGCCTTTCTCATCTTAGCATTGCCCAGAATCAGGACCCAGGAGTaGACTGACGGAAAAGCTGTTCTTGCAACCTGTGTGATCAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: EAFLILALPRIRTQE*TDGKAVLATCVIKS Trigger: GCTTTTGATCACACAGGTTGCAAGAACAGCTTTTCCGTCAGTGCACTCCTGGGTCCTGATTCTGGGCAATGCTAAGATGAGAAAGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS TCA 90 bp | AGGAGTGTCCTCTCCAGAAGCAGAGCACTCCAAACCTTCATAACATaGGACAGGAAGAAAATGGAATACAGGAGGAGGGAGGCAATCAAT | + |
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Preference number: 5 (lower is better) Translates to: RSVLSRSRALQTFIT*DRKKMEYRRREAIN Trigger: ATTGATTGCCTCCCTCCTCCTGTATTCCATTTTCTTCCTGTCTCATGTTATGAAGGTTTGGAGTGCTCTGCTTCTGGAGAGGACACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS TCA 72 bp | AGTGCACTGACGGAAAAGCTGTTCTTGCAACCTGTGTaGTCAAAAGCAGGAGTGTCCTCTCCAGAAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SALTEKLFLQPV*SKAGVSSPEAE Trigger: CTCTGCTTCTGGAGAGGACACTCCTGCTTTTGATCACACAGGTTGCAAGAACAGCTTTTCCGTCAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS TCA 72 bp | CTCTCCAGAAGCAGAGCACTCCAAACCTTCATAACATaGGACAGGAAGAAAATGGAATACAGGAGGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSRSRALQTFIT*DRKKMEYRRRE Trigger: CTCCCTCCTCCTGTATTCCATTTTCTTCCTGTCTCATGTTATGAAGGTTTGGAGTGCTCTGCTTCTGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS CCA 72 bp | AAGATGCTGAGACTTGTAGCAAACCAGAGACTACTCTaGTTGAATGTTGTCCATATACTGTGCATTATGCTA | + |
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Preference number: 6 (lower is better) Translates to: KMLRLVANQRLL*LNVVHILCIML Trigger: TAGCATAATGCACAGTATATGGACAACATTCAACCAGAGTAGTCTCTGGTTTGCTACAAGTCTCAGCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS CAA 72 bp | ACTGTGCATTATGCTAACTCTTCTATCAGTCATCCATaGTCCTGGGTAAAGCACAAATATCCACCAACTTAC | + |
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Preference number: 6 (lower is better) Translates to: TVHYANSSISHP*SWVKHKYPPTY Trigger: GTAAGTTGGTGGATATTTGTGCTTTACCCAGGACAATGGATGACTGATAGAAGAGTTAGCATAATGCACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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| CDS CAA 72 bp | ATGCTGAGACTTGTAGCAAACCAGAGACTACTCTGGTaGAATGTTGTCCATATACTGTGCATTATGCTAACT | + |
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Preference number: 6 (lower is better) Translates to: MLRLVANQRLLW*NVVHILCIMLT Trigger: AGTTAGCATAATGCACAGTATATGGACAACATTCAACCAGAGTAGTCTCTGGTTTGCTACAAGTCTCAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032315.3 |
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