Pregenerated sensors for TAS1R3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029072Ensembl transcript IDs: ENSMUST00000030949.4
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCTGAGCTGCTCCGGGATTCAGGTGTGGGGGCCAGTCCAGAACTaGCCCGGGTCTGATCCTGCCTGCAGATGGACGATGCTCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: QLSCSGIQVWGPVQN*PGSDPACRWTMLLS Trigger: GGACAAGAGCATCGTCCATCTGCAGGCAGGATCAGACCCGGGTCAGTTCTGGACTGGCCCCCACACCTGAATCCCGGAGCAGCTCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR GCA 90 bp | CAGTCCAGAACTGACCCGGGTCTGATCCTGCCTGCAGATGGACGATaGTCTTGTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: QSRTDPGLILPADGR*SCPLPLRHVALSLV Trigger: CACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATCGTCCATCTGCAGGCAGGATCAGACCCGGGTCAGTTCTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR TCA 90 bp | CATACATGCCCAGCCTTCTATTCCTGGGACGCCTGGACAGGGTGCTaGGTGAGGGCTCAGGGCTGGGCATGTTCAGGCAAGCAGTACCTT | + |
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Preference number: 1 (lower is better) Translates to: HTCPAFYSWDAWTGC*VRAQGWACSGKQYL Trigger: AAGGTACTGCTTGCCTGAACATGCCCAGCCCTGAGCCCTCACTCAGCACCCTGTCCAGGCGTCCCAGGAATAGAAGGCTGGGCATGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 90 bp | GACGATGCTCTTGTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTaGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: DDALVPCRLGMWLCP*CWPVRGLAATFLSL Trigger: CAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR GCA 90 bp | GATGCTCTTGTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTGGTaGTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: DALVPCRLGMWLCPW*WPVRGLAATFLSLV Trigger: TACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 90 bp | GCTCTTGTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTGGTGCTaGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTA | + |
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Preference number: 1 (lower is better) Translates to: ALVPCRLGMWLCPWC*PVRGLAATFLSLVL Trigger: TAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR GCA 90 bp | CTCCTACAGGCTAGGGCTCAGCTAGGGATGGAGAAGGCTGGATGTTaGCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTCTTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLQARAQLGMEKAGC*LPPECPLPDVFLVL Trigger: CAGAACAAGAAAGACATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAGCTGAGCCCTAGCCTGTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 90 bp | GTTAAGTGTCTCACGTCTCAGGCTGAGGTACTATTCGGGGCTTGTTaGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VKCLTSQAEVLFGAC*LRRFLVGLGSLKGR Trigger: CCTTCCCTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAGTACCTCAGCCTGAGACGTGAGACACTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR TCA 90 bp | GCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTTCTaGATTCAAAGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ASSTFWSPMVCLGNF*IQSMAMKSQRTFCG Trigger: CCCACAAAAGGTTCTTTGGGACTTCATAGCCATACTTTGAATTCAGAAATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CAA 90 bp | GACCCGGGTCTGATCCTGCCTGCAGATGGACGATGCTCTTGTCCCTaGCCGCTTAGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: DPGLILPADGRCSCP*PLRHVALSLVLASK Trigger: CTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATCGTCCATCTGCAGGCAGGATCAGACCCGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTCAGGCCTTGGGGGTTTaGGGAAGGGGTCACTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RHVALSLVLASKGPCGNFQALGV*GRGHCE Trigger: CTCACAGTGACCCCTTCCCCAAACCCCCAAGGCCTG...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTGTGAGGGCTCAGGGCTaGGCATGTTCAGGCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RHVALSLVLASKGPCGNFVRAQG*ACSGKQ Trigger: CTGCTTGCCTGAACATGCCCAGCCCTGAGCCCTCAC...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTGAGCTGCTCCGGGATTCATCCAGGGGTCCCGCGTaGCTGGCGCTGGCCGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GLMCGLFLFSPAELLRDSSRGPA*LALAVV Trigger: CACCACGGCCAGCGCCAGCCACGCGGGACCCCTGGA...TGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGCCAAAGAACCTTTTGTaGGTCACCTGGGCAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: RAGHVQASSTFWSPMVCLPKNLL*VTWAGL Trigger: AAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGG...CAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAACTTTTGTGGGTCACCTaGGCAGGCCTTAGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WCWPVRGLAATFLSLVLELLWVT*AGLRWA Trigger: TGCCCACCTAAGGCCTGCCCAGGTGACCCACAAAAG...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTCTCCCATGGTCTGCCTaGGGAATTTCTGAATTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RHVALSLVLASKGPCGNFLPWSA*GISEFK Trigger: TTTGAATTCAGAAATTCCCCAGGCAGACCATGGGAG...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR GCA 90 bp | GGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTGAGCTGCTCCGGGATTCACCTGCAGATGGACGATaGTCTTGTCCCTTGCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLMCGLFLFSPAELLRDSPADGR*SCPLPL Trigger: AAGCGGCAAGGGACAAGAGCATCGTCCATCTGCAGG...TGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGCTATTCGGGGCTTGTTaGCTTAGGAGATTTCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: RAGHVQASSTFWSPMVCLLFGAC*LRRFLV Trigger: TACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG...CAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATTGCCTGGGGAATTTCTaGATTCAAAGTATGGCTATG | + |
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Preference number: 2 (lower is better) Translates to: LGMEKAGCCLPPECPLPDCLGNF*IQSMAM Trigger: CATAGCCATACTTTGAATTCAGAAATTCCCCAGGCA...ATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR GCA 72 bp | GTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTGGTaGTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: VPCRLGMWLCPW*WPVRGLAATFL Trigger: CAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 72 bp | CCTTGCCGCTTAGGCATGTGGCTCTGTCCCTGGTGCTaGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PCRLGMWLCPWC*PVRGLAATFLS Trigger: GGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR GCA 72 bp | ACTGACCCGGGTCTGATCCTGCCTGCAGATGGACGATaGTCTTGTCCCTTGCCGCTTAGGCATGTGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TDPGLILPADGR*SCPLPLRHVAL Trigger: CAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATCGTCCATCTGCAGGCAGGATCAGACCCGGGTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 72 bp | CTTGTCCCTTGCCGCTTAGGCATGTGGCTCTGTCCCTaGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTT | + |
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Preference number: 3 (lower is better) Translates to: LVPCRLGMWLCP*CWPVRGLAATF Trigger: AAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR TCA 72 bp | GGGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTaGGCTGCTCCGGGATTCAGGTGTGGGGGCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GTDVWLVSLFSS*AAPGFRCGGQS Trigger: GGACTGGCCCCCACACCTGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR-3UTR CAA 90 bp | CTAGGGATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGTCCCAAAGAACCTTTaGTGGGTCACCTGGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LGMEKAGCCLPPECPLPDVPKNL*WVTWAG Trigger: GCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGAC...ATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 72 bp | CTCACGTCTCAGGCTGAGGTACTATTCGGGGCTTGTTaGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LTSQAEVLFGAC*LRRFLVGLGSL Trigger: TAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAGTACCTCAGCCTGAGACGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CCA 72 bp | GGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATaGTCTGCCTGGGGAATTTCTGAATTCAAAGTATGG | + |
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Preference number: 3 (lower is better) Translates to: GMFRQAVPSGLP*SAWGISEFKVW Trigger: CCATACTTTGAATTCAGAAATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR TCA 72 bp | TCTGCCTGGGGAATTTCTGAATTCAAAGTATGGCTATaGAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SAWGISEFKVWL*SPKEPFVGHLG Trigger: GCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACTTTGAATTCAGAAATTCCCCAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR TCA 72 bp | ACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTTCTaGATTCAAAGTATGGCTATGAAGTCCCAAAGAACC | + |
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Preference number: 3 (lower is better) Translates to: TFWSPMVCLGNF*IQSMAMKSQRT Trigger: GGTTCTTTGGGACTTCATAGCCATACTTTGAATTCAGAAATTCCCCAGGCAGACCATGGGAGACCAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | TTAGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTAGAGGGCTGTCCCAGTaGTGGACAGAGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGMWLCPWCWPVRGLAATRGLSQ*WTESPR Trigger: TCTGGGGCTCTCTGTCCACCACTGGGACAGCCCTCT...AGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | AGGGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGCTAGCATGGCGAAGGTaGGACCACGGGCACGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RAGHVQASSTFWSPMVCLLAWRR*DHGHGC Trigger: ACAACCGTGCCCGTGGTCTCACCTTCGCCATGCTAG...CAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTCACCAGGCCCTCATGTaGGATGCAGATACCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFHQALM*DADTSC Trigger: GCACGAGGTATCTGCATCGCACATGAGGGCCTGGTG...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CAA 72 bp | CTGATCCTGCCTGCAGATGGACGATGCTCTTGTCCCTaGCCGCTTAGGCATGTGGCTCTGTCCCTGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LILPADGRCSCP*PLRHVALSLVL Trigger: CAGCACCAGGGACAGAGCCACATGCCTAAGCGGCAAGGGACAAGAGCATCGTCCATCTGCAGGCAGGATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | GGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTGCTGCACCCGGTCACTaGGCACTGTGCGGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GMFRQAVPSGLPWSAWGIAAPGH*ALCGRR Trigger: CCTTCTTCCGCACAGTGCCCAGTGACCGGGTGCAGC...AATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCAGCCAAGACTCACTaGCCACCCATACCTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFSAKTH*PPIPWV Trigger: CACCCAAGGTATGGGTGGCCAGTGAGTCTTGGCTGA...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGGCACCAAGCCCAGGCTaGCCCAGGAACGCACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKAPSPG*PRNARG Trigger: GCCACGTGCGTTCCTGGGTCAGCCTGGGCTTGGTGC...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | CTAGGGATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGGTAGCTGCCCGCCTTaGAGTCCACGCAGTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: LGMEKAGCCLPPECPLPDGSCPP*SPRSHS Trigger: GCTATGACTGCGTGGACTGCAAGGCGGGCAGCTACC...ATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | GGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTGAACGCACGTGGCAGTaGTCCAGTACCTCTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GMFRQAVPSGLPWSAWGIERTWQ*SSTSVG Trigger: GCCCACAGAGGTACTGGAGCACTGCCACGTGCGTTC...AATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTCTGCCTCCACAAAAGTaGCCAACAGTACCACTAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFLPPQK*PTVPLA Trigger: GGCTAGTGGTACTGTTGGCCACTTTTGTGGAGGCAG...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | CTAGGGATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATCCAGAAACTTGGGCCTaGGAGGTAAGCAGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LGMEKAGCCLPPECPLPDPETWA*EVSRLC Trigger: GCACAGCCTGCTTACCTCGCAGGCCCAAGTTTCTGG...ATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | GGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTGAGCTGCTCCGGGATTCAGCAGCTGGCAGAGCTTaGCCGCCCTGGGAACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLMCGLFLFSPAELLRDSAAGRA*PPWEQK Trigger: CTTCTGTTCCCAGGGCGGCCAAGCTCTGCCAGCTGC...TGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGATGAGTGGGGGCCGATaGCAGCCAGCACACGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKMSGGR*QPAHGV Trigger: AACCCCGTGTGCTGGCTGTCATCGGCCCCCACTCAT...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAAGAGTCACAACTGCCTaGAGCTGCACCCGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: WCWPVRGLAATFLSLVLERVTTA*SCTRSL Trigger: CAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCT...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTATTTGGTGGTGCAATTaGCCAGCTGATAGGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFIWWCN*PADRFC Trigger: GCAGAACCTATCAGCTGGGCAATTGCACCACCAAAT...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTATGTTCTCCAGGAGCTaGCAGGGTAGAACATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFMFSRS*QGRTCS Trigger: AGAACATGTTCTACCCTGGCAGCTCCTGGAGAACAT...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | TGCTTTGAAAGGATAGGTGGGCTCATAGGGTCCATCTTGTGCACTGCAGGCCTTGCAAGCTCTGATGAGTaGGGGCCGATGACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CFERIGGLIGSILCTAGLASSDE*GPMTAS Trigger: GCTGGCTGTCATCGGCCCCCACTCATCAGAGCTTGC...AAGGCCTGCAGTGCACAAGATGGACCCTATGAGCCCACCTATCCTTTCAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | CTAGGGATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATTGGCCATCTTTGCACTaGCGGGAACACTGGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: LGMEKAGCCLPPECPLPDWPSLH*REHWET Trigger: AGTCTCCCAGTGTTCCCGCCAGTGCAAAGATGGCCA...ATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCATCCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGGGGCTGTCCCAGTGGTaGACAGAGAGCCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKGLSQW*TESPRA Trigger: TGCTCTGGGGCTCTCTGTCCACCACTGGGACAGCCC...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGGAGCCACCTGAGGCCTaGACAAGAGGGCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKEPPEA*TRGLSQ Trigger: CTGGGACAGCCCTCTTGTCCAGGCCTCAGGTGGCTC...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | GGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTCTAACATTGCATTGGTaGTGTGCACCAAGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMFRQAVPSGLPWSAWGILTLHW*CAPSPG Trigger: GCCTGGGCTTGGTGCACATCACCAATGCAATGTTAG...AATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | TTAGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTCCTTGTGCCTTGAATTaGTGTGACAGACACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGMWLCPWCWPVRGLAATPCALN*CDRHKE Trigger: CTCTTTGTGTCTGTCACAGCAATTCAAGGCACAAGG...AGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTGGCAATGTGAGACATTaGACTGTAGGGTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHVALSLVLASKGPCGNFGNVRH*TVGCCE Trigger: TTCACAACACCCTACAGTGCAATGTCTCACATTGCC...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAGGGGACCACTGGTCCTaGTTACATGGAGTACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WCWPVRGLAATFLSLVLEGDHWS*LHGVQV Trigger: CACCTGTACTCCATGTAACCAGGACCAGTGGTCCCC...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTAGGCCACCTGCACATTaGCCAGGAGGGGCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MEKAGCCLPPECPLPDVFRPPAH*PGGAQK Trigger: CTTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGCCT...AAAGACATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | AGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGCAGGCCTTAGGAACAGAAGGACACTaGGGCAGAAGAGGCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMAMKSQRTFCGSPGQALGTEGH*GRRGLG Trigger: GCCTAGGCCTCTTCTGCCTCAGTGTCCTTCTGTTCC...TAAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | GGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTGAGCTGCTCCGGGATTCACCTGTGAGAGGGAGGTaGGCCATTGGTTGTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLMCGLFLFSPAELLRDSPVRGR*AIGCCA Trigger: TGCACAACAACCAATGGCTCACCTCCCTCTCACAGG...TGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGACATGTTCTGATACGTaGCAATGTGAGACATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWACSGKQYLLVSHGLPGTCSDT*QCETLH Trigger: GTGCAATGTCTCACATTGCCACGTATCAGAACATGT...CCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGAGAGCTTGGCCGCCCTaGGAACAGAAGGACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKRAWPP*EQKDTE Trigger: CTCAGTGTCCTTCTGTTCCCAGGGCGGCCAAGCTCT...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | GATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTCTTGTTCTGTCCTCACCCATACCTTGGGTaGGAGGCCATGATGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVAYLLSVLCLMSFLFCPHPYLG*EAMMDA Trigger: AGCATCCATCATGGCCTCTCACCCAAGGTATGGGTG...AGGACAGAACAAGAAAGACATCAGGCAGAGGACACTCAGGAGGTAGGCAACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | TGCTTTGAAAGGATAGGTGGGCTCATAGGGTCCATCTTGTGCACTGCAGGCCTTAAGGTCTCAGCTGCTTaGAGGAAGAGTGTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFERIGGLIGSILCTAGLKVSAA*RKSVLR Trigger: CCTGAGCACACTCTTCCTGCAAGCAGCTGAGACCTT...AAGGCCTGCAGTGCACAAGATGGACCCTATGAGCCCACCTATCCTTTCAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGTCAAGTCTCGAGCATaGAAACTCATATTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: GWACSGKQYLLVSHGLPGVKSRA*KLILYM Trigger: CATGTACAATATGAGTTTCCATGCTCGAGACTTGAC...CCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGTGGGAGACTGGCACCTaGTTGCCTGGCCAGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKWETGT*LPGQYI Trigger: AATGTACTGGCCAGGCAACCAGGTGCCAGTCTCCCA...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | ATGGAGAAGGCTGGATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTAGTCCCCTTGTGCCTTaGATTGCTGTGACAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: MEKAGCCLPPECPLPDVFSPLVP*IAVTDT Trigger: TGTGTCTGTCACAGCAATTCAAGGCACAAGGGGACT...AAAGACATCAGGCAGAGGACACTCAGGAGGTAGGCAACATCCAGCCTTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | TGCTTTGAAAGGATAGGTGGGCTCATAGGGTCCATCTTGTGCACTGCAGGCCTTAGAACTCCTGGGTGTTaGGCTTTGGCAGCCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFERIGGLIGSILCTAGLRTPGC*ALAAKE Trigger: TTCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCT...AAGGCCTGCAGTGCACAAGATGGACCCTATGAGCCCACCTATCCTTTCAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGAGCCATTGGTTGTTGTaGAAGGCAGCTGGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKSHWLL*KAAGRA Trigger: AGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCT...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAGCCACTGTTCTCATCTaGTGCTTTCTTGGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WCWPVRGLAATFLSLVLEATVLI*CFLGIP Trigger: AGGAATGCCAAGAAAGCAGCAGATGAGAACAGTGGC...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGCAGGCCTTATTGGGTTGTGTTCTCTaGTTGAGAGTGGCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SMAMKSQRTFCGSPGQALLGCVL*LRVASS Trigger: CGAGGAGGCCACTCTCAACCAGAGAACACAACCCAA...TAAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGACTTGTACTTTACTTTaGTTCACTTGGCGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GWACSGKQYLLVSHGLPGTCTLL*FTWRST Trigger: TGTACTACGCCAAGTGAACCAAAGTAAAGTACAAGT...CCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGCAGGCCTTAAGGGAGGTGAGCCATTaGTTGTTGTGCAAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMAMKSQRTFCGSPGQALREVSH*LLCKAA Trigger: AGCTGCCTTGCACAACAACCAATGGCTCACCTCCCT...TAAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGTATTGGGAAGTGTCATaGCCAGGTCAGATGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKYWEVS*PGQMSA Trigger: GGCTGACATCTGACCTGGTCATGACACTTCCCAATA...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGCAGGCCTTACATCTGCTGCTTTCTTaGCATTCCTTCCCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMAMKSQRTFCGSPGQALHLLLS*HSFPGR Trigger: TCTTCCTGGGAAGGAATGCCAAGAAAGCAGCAGATG...TAAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACGTTGTGCAAGGCAGCTaGCAGAGCTTGGCCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHVVQGS*QSLAAL Trigger: CAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAAC...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACTGCTCAGGCAGCCTGTaGGAGGGAGGTGAGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHCSGSL*EGGEPL Trigger: CAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGCA...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACACAACTGCCTGCAGCTaGACCCGGTCACTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHTTACS*TRSLGT Trigger: AGTGCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGT...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | CTATTCGGGGCTTGTTGGCTTAGGAGATTTCTGGTAGGGCTAGGTTCCCTAAAGCACAGCTGCATAGGTTaGAAATATTTGGTGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFGACWLRRFLVGLGSLKHSCIG*KYLVVQ Trigger: TTGCACCACCAAATATTTGCAACCTATGCAGCTGTG...CTTTAGGGAACCTAGCCCTACCAGAAATCTCCTAAGCCAACAAGCCCCGAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | AGTATGGCTATGAAGTCCCAAAGAACCTTTTGTGGGTCACCTGGGCAGGCCTTAGTTGCAAATATTTGGTaGTGCAATTGCCCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMAMKSQRTFCGSPGQALVANIW*CNCPAD Trigger: ATCAGCTGGGCAATTGCACCACCAAATATTTGCAAC...TAAGGCCTGCCCAGGTGACCCACAAAAGGTTCTTTGGGACTTCATAGCCATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACCCCAAGCCAGAAACTTaGGCCTGCGAGGTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHPKPET*ACEVSR Trigger: CCTGCTTACCTCGCAGGCCCAAGTTTCTGGCTTGGG...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR GCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACACAGGTGTAGGGCTCTaGCACACCCACATCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHTGVGL*HTHIFR Trigger: CCTGAAGATGTGGGTGTGGCAGAGCCCTACACCTGT...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| 3UTR CAA 72 bp | GCCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTCTaGTTCTGTCCTGATACATACATACATACGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: AYLLSVLCLMSF*FCPDTYIHTYI Trigger: TATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACATCAGGCAGAGGACACTCAGGAGGTAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTCTTGTTCTGTCCTGATACATACATACATACGTACATACACACACACACTAGTGTCATGTTGTaGCACCAGGCCCTCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSFLFCPDTYIHTYIHTHTSVML*HQALMC Trigger: GCACATGAGGGCCTGGTGCCACAACATGACACTAGT...GTGTGTGTGTATGTACGTATGTATGTATGTATCAGGACAGAACAAGAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 90 bp | AACTGTGAGCCACCTGAGGCCTGGACAAGAGGGCTGTCCCAGTGGTaGACAGAGAGCCCCAGAGCAGCCAGTGCTAGACCCAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NCEPPEAWTRGLSQW*TESPRAASARPSTR Trigger: CCTGGTGCTGGGTCTAGCACTGGCTGCTCTGGGGCTCTCTGTCCACCACTGGGACAGCCCTCTTGTCCAGGCCTCAGGTGGCTCACAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 90 bp | GCTGCTTGCAGGAAGAGTGTGCTCAGGCAGCCTGTGAGAGGGAGGTaGGCCATTGGTTGTTGTGCAAGGCAGCTGGCAGAGCTTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AACRKSVLRQPVRGR*AIGCCARQLAELGR Trigger: GCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGCACACTCTTCCTGCAAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 90 bp | GGCGGCCACCCAGTTCCAGCTGAAGTTCTGCAACAGAGTCACAACTaGCTGCAGCTGCACCCGGTCACTGGGCACTGTGCGGAAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGHPVPAEVLQQSHN*LQLHPVTGHCAEEG Trigger: TCCTTCTTCCGCACAGTGCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGGGTGGCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 90 bp | TGTGCTCAGGCAGCCTGTGAGAGGGAGGTGAGCCATTGGTTGTTGTaGAAGGCAGCTGGCAGAGCTTGGCCGCCCTGGGAACAGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CAQAACEREVSHWLL*KAAGRAWPPWEQKD Trigger: GTCCTTCTGTTCCCAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 90 bp | CCTAGGCAGATCAGGCCAAAGCAGAACTGTGAGCCACCTGAGGCCTaGACAAGAGGGCTGTCCCAGTGGTGGACAGAGAGCCCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRQIRPKQNCEPPEA*TRGLSQWWTESPRA Trigger: TGCTCTGGGGCTCTCTGTCCACCACTGGGACAGCCCTCTTGTCCAGGCCTCAGGTGGCTCACAGTTCTGCTTTGGCCTGATCTGCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CAA 90 bp | GCGCTGGCCGTGGTGCTGACCCGCACCCTGTGTGTGATCTGTCCAAGGTGCTGGAGCAAGGCAGATCCATaGTTGATCTCCTCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALAVVLTRTLCVICPRCWSKADP*LISSTA Trigger: GGCTGTGGAGGAGATCAACAATGGATCTGCCTTGCT...CCAGCACCTTGGACAGATCACACACAGGGTGCGGGTCAGCACCACGGCCAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CAA 90 bp | AGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTCCCCAAGCCAGAAACTaGGGCCTGCGAGGTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHVALSLVLASKGPCGNFPQARN*GLRGKQ Trigger: CTGCTTACCTCGCAGGCCCAAGTTTCTGGCTTGGGG...AAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 90 bp | CAAGGCAGCTGGCAGAGCTTGGCCGCCCTGGGAACAGAAGGACACTaGGGCAGAAGAGGCCTAGGCAGATCAGGCCAAAGCAGAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSWQSLAALGTEGH*GRRGLGRSGQSRTV Trigger: CACAGTTCTGCTTTGGCCTGATCTGCCTAGGCCTCTTCTGCCTCAGTGTCCTTCTGTTCCCAGGGCGGCCAAGCTCTGCCAGCTGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 90 bp | TCATCATCACTCCCTAAGGCGGCCACCCAGTTCCAGCTGAAGTTCTaGAACAGAGTCACAACTGCCTGCAGCTGCACCCGGTCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLPKAATQFQLKF*NRVTTACSCTRSLG Trigger: GCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGGGTGGCCGCCTTAGGGAGTGATGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 90 bp | GTTTGCCCAGCTCAGTGGCAGCTCAGACTCCACAAAGGTCTCAGCTaGTTGCAGGAAGAGTGTGCTCAGGCAGCCTGTGAGAGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCPAQWQLRLHKGLS*LQEECAQAACEREV Trigger: CACCTCCCTCTCACAGGCTGCCTGAGCACACTCTTCCTGCAAGCAGCTGAGACCTTTGTGGAGTCTGAGCTGCCACTGAGCTGGGCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 90 bp | TGGCCAACAGTACCACTAGCCAGGCCCAGAGTCCCCGAAGGTAGCTaGATAGCCAGTTTGCCCAGCTCAGTGGCAGCTCAGACTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WPTVPLARPRVPEGS*IASLPSSVAAQTPQ Trigger: TTGTGGAGTCTGAGCTGCCACTGAGCTGGGCAAACTGGCTATGCAGCTACCTTCGGGGACTCTGGGCCTGGCTAGTGGTACTGTTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS-3UTR CAA 90 bp | GCGCTGGCCGTGGTGCTGACCCGCACCCTGTGTGTGATCTGTCCAAGGTGCTGGCAGATACCTCGTGCATaGGCCAGACTAGAAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALAVVLTRTLCVICPRCWQIPRA*ARLEKM Trigger: CATCTTTTCTAGTCTGGCCAATGCACGAGGTATCTG...CCAGCACCTTGGACAGATCACACACAGGGTGCGGGTCAGCACCACGGCCAGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 90 bp | GGCCATAGTCATCATCACTCCCTAAGGCGGCCACCCAGTTCCAGCTaGAGTTCTGCAACAGAGTCACAACTGCCTGCAGCTGCACCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHSHHHSLRRPPSSS*SSATESQLPAAAPG Trigger: ACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGGGTGGCCGCCTTAGGGAGTGATGATGACTATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 90 bp | CCAGGAACGCACGTGGCAGTGCTCCAGTACCTCTGTGGGCAGCACTaGCCAGTCTGTCACCACCTCTGGTGGGAAAGCGATCAAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: PGTHVAVLQYLCGQH*PVCHHLWWESDQIP Trigger: TGGTATTTGATCGCTTTCCCACCAGAGGTGGTGACAGACTGGTCAGTGCTGCCCACAGAGGTACTGGAGCACTGCCACGTGCGTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 90 bp | ACAGAGTCACAACTGCCTGCAGCTGCACCCGGTCACTGGGCACTGTaGGGAAGAAGGATGGAAACGTTTCCCGGTCACTTAGCCGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TESQLPAAAPGHWAL*GRRMETFPGHLADP Trigger: TGGATCGGCTAAGTGACCGGGAAACGTTTCCATCCTTCTTCCGCACAGTGCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | TGGGGACCACTGGTCCTGGTTACATGGAGTACAGGTGAAGTCATCTaGATGCTTCCGGTAGCTGCCCGCCTTGCAGTCCACGCAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: WGPLVLVTWSTGEVI*MLPVAARLAVHAVI Trigger: TATGACTGCGTGGACTGCAAGGCGGGCAGCTACCGGAAGCATCCAGATGACTTCACCTGTACTCCATGTAACCAGGACCAGTGGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | TTAGGCATGTGGCTCTGTCCCTGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTCATCTGCTGCTTTCTaGGCATTCCTTCCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGMWLCPWCWPVRGLAATSSAAF*AFLPRK Trigger: CTTCCTGGGAAGGAATGCCAAGAAAGCAGCAGATGA...AGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACAGAGCCACATGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 90 bp | TGCTTTTCTCTGGGGACCACTGGTCCTGGTTACATGGAGTACAGGTaGAGTCATCTGGATGCTTCCGGTAGCTGCCCGCCTTGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CFSLGTTGPGYMEYR*SHLDASGSCPPCSP Trigger: TGGACTGCAAGGCGGGCAGCTACCGGAAGCATCCAGATGACTTCACCTGTACTCCATGTAACCAGGACCAGTGGTCCCCAGAGAAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 90 bp | AAAGTGCCCAGAAAGCAGAGGAAAGCTAACATTGCATTGGTGATGTaGACCAAGCCCAGGCTGACCCAGGAACGCACGTGGCAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPRKQRKANIALVM*TKPRLTQERTWQCS Trigger: GGAGCACTGCCACGTGCGTTCCTGGGTCAGCCTGGGCTTGGTGCACATCACCAATGCAATGTTAGCTTTCCTCTGCTTTCTGGGCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | TACATCCAGCACCTTGCCCAACTGTTGGCCACTAGTGTCATGTTGTaGCACCAGGCCCTCATGTGCGATGCAGATACCTCGTGCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YIQHLAQLLATSVML*HQALMCDADTSCIG Trigger: GCCAATGCACGAGGTATCTGCATCGCACATGAGGGCCTGGTGCCACAACATGACACTAGTGGCCAACAGTTGGGCAAGGTGCTGGATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | ATCTTTGCACTGGCGGGAACACTGGGAGACTGGCACCTGGTTGCCTaGCCAGTACATTTTAGACTGCTGCAGCTGAAGGGTGCCGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IFALAGTLGDWHLVA*PVHFRLLQLKGAVE Trigger: TTCAACGGCACCCTTCAGCTGCAGCAGTCTAAAATGTACTGGCCAGGCAACCAGGTGCCAGTCTCCCAGTGTTCCCGCCAGTGCAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | GGAAAGCGATCAAATACCAGGCACATAGTGCTGCCTCCACAAAAGTaGCCAACAGTACCACTAGCCAGGCCCAGAGTCCCCGAAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKRSNTRHIVLPPQK*PTVPLARPRVPEGS Trigger: GCTACCTTCGGGGACTCTGGGCCTGGCTAGTGGTACTGTTGGCCACTTTTGTGGAGGCAGCACTATGTGCCTGGTATTTGATCGCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 90 bp | GTCATGTTGTGGCACCAGGCCCTCATGTGCGATGCAGATACCTCGTaGATTGGCCAGACTAGAAAAGATGCTCAGACCTTCCCGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: VMLWHQALMCDADTS*IGQTRKDAQTFPAI Trigger: TATGGCCGGGAAGGTCTGAGCATCTTTTCTAGTCTGGCCAATGCACGAGGTATCTGCATCGCACATGAGGGCCTGGTGCCACAACATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | CTTTGGTTCACTTGGCGTAGTACATCCAGCACCTTGCCCAACTGTTaGCCACTAGTGTCATGTTGTGGCACCAGGCCCTCATGTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWFTWRSTSSTLPNC*PLVSCCGTRPSCAM Trigger: CATCGCACATGAGGGCCTGGTGCCACAACATGACACTAGTGGCCAACAGTTGGGCAAGGTGCTGGATGTACTACGCCAAGTGAACCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | GGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGAATTCGGGATGCTGTTGGGTaGTGTTCTCTGGTTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GMFRQAVPSGLPWSAWGIRDAVG*CSLVES Trigger: ACTCTCAACCAGAGAACACAACCCAACAGCATCCCG...AATTCCCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAAGCCAGCACACGGGGTaGGTACTGTGTGTAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WCWPVRGLAATFLSLVLESQHTG*VLCVVA Trigger: TGCAACTACACACAGTACCAACCCCGTGTGCTGGCT...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGAAAGGATAGGTGGGCTCATAGGGTCCATCTTGTGCACTGCAGGCCTTGCCACTAGTGTCATGTaGTGGCACCAGGCCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CFERIGGLIGSILCTAGLATSVM*WHQALM Trigger: CATGAGGGCCTGGTGCCACAACATGACACTAGTGGC...AAGGCCTGCAGTGCACAAGATGGACCCTATGAGCCCACCTATCCTTTCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGCATGTTCAGGCAAGCAGTACCTTCTGGTCTCCCATGGTCTGCCTGGGGCATGGAAACTCATATaGTACATGTTCTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWACSGKQYLLVSHGLPGAWKLI*YMFSRS Trigger: GCTCCTGGAGAACATGTACAATATGAGTTTCCATGC...CCCAGGCAGACCATGGGAGACCAGAAGGTACTGCTTGCCTGAACATGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 90 bp | AAAACCCAAGCACAGTGCCCACACGGGCAATATTGGGAAGTGTCATaGCCAGGTCAGATGTCAGCCAAGACTCACTGGCCACCCATACCT | + |
|
Preference number: 5 (lower is better) Translates to: KTQAQCPHGQYWEVS*PGQMSAKTHWPPIP Trigger: AGGTATGGGTGGCCAGTGAGTCTTGGCTGACATCTGACCTGGTCATGACACTTCCCAATATTGCCCGTGTGGGCACTGTGCTTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 90 bp | CTGCTGCTTTCTTGGCATTCCTTCCCAGGAAGAACTCCTGGGTGTTaGGCTTTGGCAGCCAAAGAAGCACATAGCACTTGGGCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSWHSFPGRTPGC*ALAAKEAHSTWAGG Trigger: TCCACCTGCCCAAGTGCTATGTGCTTCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCTTCCTGGGAAGGAATGCCAAGAAAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 90 bp | TTCATTGTGTCCCTGAGCTGCCTCACCACCGCCACTGTTCTCATCTaGTGCTTTCTTGGCATTCCTTCCCAGGAAGAACTCCTGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FIVSLSCLTTATVLI*CFLGIPSQEELLGV Trigger: AACACCCAGGAGTTCTTCCTGGGAAGGAATGCCAAGAAAGCAGCAGATGAGAACAGTGGCGGTGGTGAGGCAGCTCAGGGACACAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAGAGACTGGCACCTGGTaGCCTGGCCAGTACATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: WCWPVRGLAATFLSLVLEETGTW*PGQYIL Trigger: TAAAATGTACTGGCCAGGCAACCAGGTGCCAGTCTC...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 90 bp | CAGGTCAGATGTCAGCCAAGACTCACTGGCCACCCATACCTTGGGTaGGAGGCCATGATGGATGCTGTAACTAAAAAGGGAGTAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QVRCQPRLTGHPYLG*EAMMDAVTKKGVDS Trigger: GCTGTCTACTCCCTTTTTAGTTACAGCATCCATCATGGCCTCTCACCCAAGGTATGGGTGGCCAGTGAGTCTTGGCTGACATCTGACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 90 bp | TTTCTTGGCATTCCTTCCCAGGAAGAACTCCTGGGTGTTGAGCTTTaGCAGCCAAAGAAGCACATAGCACTTGGGCAGGTGGAAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLGIPSQEELLGVEL*QPKKHIALGQVEGD Trigger: GTCACCTTCCACCTGCCCAAGTGCTATGTGCTTCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCTTCCTGGGAAGGAATGCCAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | GGACTGATGTGTGGCTTGTTTCTCTTTTCTCCAGCTGAGCTGCTCCGGGATTCAAAGAAGCTGAAGAACTaGCCTGTAATGAGGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLMCGLFLFSPAELLRDSKKLKN*PVMRAS Trigger: GCTTGCCCTCATTACAGGCAAGTTCTTCAGCTTCTT...TGAATCCCGGAGCAGCTCAGCTGGAGAAAAGAGAAACAAGCCACACATCAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTGGCCAGTAAGGGGCCTTGCGGCAACTTTTCTGTCCTTGGTACTAGAAACACAGCTGCATAGGTaGCAAATATTTGGTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WCWPVRGLAATFLSLVLETQLHR*QIFGGA Trigger: TGCACCACCAAATATTTGCAACCTATGCAGCTGTGT...TTCTAGTACCAAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS-3UTR CAA 90 bp | GATGTTGCCTACCTCCTGAGTGTCCTCTGCCTGATGTCTTTCTTGTTCTGTCCTAAGAACTCCTGGGTGTaGAGCTTTGGCAGCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DVAYLLSVLCLMSFLFCPKNSWV*SFGSQR Trigger: TCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCTT...AGGACAGAACAAGAAAGACATCAGGCAGAGGACACTCAGGAGGTAGGCAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 90 bp | AAGTCTCGAGCATGGAAACTCATATTGTACATGTTCTCCAGGAGCTaGCAGGGTAGAACATGTTCTGATACGTGGCAATGTGAGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRAWKLILYMFSRS*QGRTCSDTWQCETL Trigger: CAATGTCTCACATTGCCACGTATCAGAACATGTTCTACCCTGGCAGCTCCTGGAGAACATGTACAATATGAGTTTCCATGCTCGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 90 bp | TCTACATTCCCTTCAGCATCAAACTGTAGTGTCAAGTCTCGAGCATaGAAACTCATATTGTACATGTTCTCCAGGAGCTGCCAGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: STFPSASNCSVKSRA*KLILYMFSRSCQGR Trigger: TCTACCCTGGCAGCTCCTGGAGAACATGTACAATATGAGTTTCCATGCTCGAGACTTGACACTACAGTTTGATGCTGAAGGGAATGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | GAGCCACCTGAGGCCTGGACAAGAGGGCTGTCCCAGTaGTGGACAGAGAGCCCCAGAGCAGCCAGTGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EPPEAWTRGLSQ*WTESPRAASAR Trigger: TCTAGCACTGGCTGCTCTGGGGCTCTCTGTCCACCACTGGGACAGCCCTCTTGTCCAGGCCTCAGGTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CAA 72 bp | CAGGCAGCCTGTGAGAGGGAGGTGAGCCATTGGTTGTaGTGCAAGGCAGCTGGCAGAGCTTGGCCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QAACEREVSHWL*CKAAGRAWPPW Trigger: CCAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CAA 72 bp | GCTCAGGCAGCCTGTGAGAGGGAGGTGAGCCATTGGTaGTTGTGCAAGGCAGCTGGCAGAGCTTGGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AQAACEREVSHW*LCKAAGRAWPP Trigger: GGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | GCAGCCTGTGAGAGGGAGGTGAGCCATTGGTTGTTGTaGAAGGCAGCTGGCAGAGCTTGGCCGCCCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AACEREVSHWLL*KAAGRAWPPWE Trigger: TTCCCAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | CCCAGGAACGCACGTGGCAGTGCTCCAGTACCTCTGTaGGCAGCACTGACCAGTCTGTCACCACCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRNARGSAPVPL*AALTSLSPPLV Trigger: CACCAGAGGTGGTGACAGACTGGTCAGTGCTGCCCACAGAGGTACTGGAGCACTGCCACGTGCGTTCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | ATGTGCACCAAGCCCAGGCTGACCCAGGAACGCACGTaGCAGTGCTCCAGTACCTCTGTGGGCAGCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: MCTKPRLTQERT*QCSSTSVGSTD Trigger: GTCAGTGCTGCCCACAGAGGTACTGGAGCACTGCCACGTGCGTTCCTGGGTCAGCCTGGGCTTGGTGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CAA 90 bp | GAAGAGTGTGCTCAGGCAGCCTGTGAGAGGGAGGTGAGCCATTGGTaGTTGTGCAAGGCAGCTGGCAGAGCTTGGCCGCCCTGGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: EECAQAACEREVSHW*LCKAAGRAWPPWEQ Trigger: CTGTTCCCAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGCACACTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | CTCCCTAAGGCGGCCACCCAGTTCCAGCTGAAGTTCTaGAACAGAGTCACAACTGCCTGCAGCTGCACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPKAATQFQLKF*NRVTTACSCTR Trigger: CCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGGGTGGCCGCCTTAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | GAGGGAGGTGAGCCATTGGTTGTTGTGCAAGGCAGCTaGCAGAGCTTGGCCGCCCTGGGAACAGAAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: EGGEPLVVVQGS*QSLAALGTEGH Trigger: GTGTCCTTCTGTTCCCAGGGCGGCCAAGCTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CAA 90 bp | CCACTAGCCAGGCCCAGAGTCCCCGAAGGTAGCTGCATAGCCAGTTaGCCCAGCTCAGTGGCAGCTCAGACTCCACAAAGGTCTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLARPRVPEGSCIAS*PSSVAAQTPQRSQL Trigger: CAGCTGAGACCTTTGTGGAGTCTGAGCTGCCACTGAGCTGGGCAAACTGGCTATGCAGCTACCTTCGGGGACTCTGGGCCTGGCTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 72 bp | CACGTGGCAGTGCTCCAGTACCTCTGTGGGCAGCACTaGCCAGTCTGTCACCACCTCTGGTGGGAAAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HVAVLQYLCGQH*PVCHHLWWESD Trigger: ATCGCTTTCCCACCAGAGGTGGTGACAGACTGGTCAGTGCTGCCCACAGAGGTACTGGAGCACTGCCACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | CCAGTTCCAGCTGAAGTTCTGCAACAGAGTCACAACTaGCTGCAGCTGCACCCGGTCACTGGGCACTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PVPAEVLQQSHN*LQLHPVTGHCA Trigger: CGCACAGTGCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | ATCAGGCCAAAGCAGAACTGTGAGCCACCTGAGGCCTaGACAAGAGGGCTGTCCCAGTGGTGGACAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRPKQNCEPPEA*TRGLSQWWTES Trigger: GCTCTCTGTCCACCACTGGGACAGCCCTCTTGTCCAGGCCTCAGGTGGCTCACAGTTCTGCTTTGGCCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS TCA 72 bp | AGGAAGAGTGTGCTCAGGCAGCCTGTGAGAGGGAGGTaGGCCATTGGTTGTTGTGCAAGGCAGCTGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKSVLRQPVRGR*AIGCCARQLAE Trigger: CTCTGCCAGCTGCCTTGCACAACAACCAATGGCTCACCTCCCTCTCACAGGCTGCCTGAGCACACTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | TTCCAGCTGAAGTTCTGCAACAGAGTCACAACTGCCTaGAGCTGCACCCGGTCACTGGGCACTGTGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FQLKFCNRVTTA*SCTRSLGTVRK Trigger: CTTCCGCACAGTGCCCAGTGACCGGGTGCAGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | GCTCAGTGGCAGCTCAGACTCCACAAAGGTCTCAGCTaGTTGCAGGAAGAGTGTGCTCAGGCAGCCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AQWQLRLHKGLS*LQEECAQAACE Trigger: CTCACAGGCTGCCTGAGCACACTCTTCCTGCAAGCAGCTGAGACCTTTGTGGAGTCTGAGCTGCCACTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | AACCTGTTGCACGGGATGCTGTTGGGTTGTGTTCTCTaGTTGAGAGTGGCCTCCTCGGTTGAGCCCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NLLHGMLLGCVL*LRVASSVEPRG Trigger: TCCCCTGGGCTCAACCGAGGAGGCCACTCTCAACCAGAGAACACAACCCAACAGCATCCCGTGCAACAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | CTGGCGGGAACACTGGGAGACTGGCACCTGGTTGCCTaGCCAGTACATTTTAGACTGCTGCAGCTGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAGTLGDWHLVA*PVHFRLLQLKG Trigger: ACCCTTCAGCTGCAGCAGTCTAAAATGTACTGGCCAGGCAACCAGGTGCCAGTCTCCCAGTGTTCCCGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS GCA 72 bp | AATGAAAGCCCTTTACTCGGCGAACCTGGCCATCTTTaGACTGGCGGGAACACTGGGAGACTGGCACCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: NESPLLGEPGHL*TGGNTGRLAPG Trigger: ACCAGGTGCCAGTCTCCCAGTGTTCCCGCCAGTGCAAAGATGGCCAGGTTCGCCGAGTAAAGGGCTTTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | AAGAACTTGCCTGTAATGAGGGCAAGCTCTGATGAGTaGGGGCCGATGACAGCCAGCACACGGGGTTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KNLPVMRASSDE*GPMTASTRGWY Trigger: GTACCAACCCCGTGTGCTGGCTGTCATCGGCCCCCACTCATCAGAGCTTGCCCTCATTACAGGCAAGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | CACCTTGCCCAACTGTTGGCCACTAGTGTCATGTTGTaGCACCAGGCCCTCATGTGCGATGCAGATACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: HLAQLLATSVML*HQALMCDADTS Trigger: CGAGGTATCTGCATCGCACATGAGGGCCTGGTGCCACAACATGACACTAGTGGCCAACAGTTGGGCAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
||
| CDS CCA 72 bp | TCTTTGCACTGGCGGGAACACTGGGAGACTGGCACCTaGTTGCCTGGCCAGTACATTTTAGACTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLHWREHWETGT*LPGQYILDCCS Trigger: GCTGCAGCAGTCTAAAATGTACTGGCCAGGCAACCAGGTGCCAGTCTCCCAGTGTTCCCGCCAGTGCAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | CTGGTCCTGGTTACATGGAGTACAGGTGAAGTCATCTaGATGCTTCCGGTAGCTGCCCGCCTTGCAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LVLVTWSTGEVI*MLPVAARLAVH Trigger: GTGGACTGCAAGGCGGGCAGCTACCGGAAGCATCCAGATGACTTCACCTGTACTCCATGTAACCAGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CAA 90 bp | GCACCCCGCTGCAAAAACCCAAGCACAGTGCCCACACGGGCAATATaGGGAAGTGTCATGACCAGGTCAGATGTCAGCCAAGACTCACTG | + |
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Preference number: 6 (lower is better) Translates to: APRCKNPSTVPTRAI*GSVMTRSDVSQDSL Trigger: CAGTGAGTCTTGGCTGACATCTGACCTGGTCATGACACTTCCCAATATTGCCCGTGTGGGCACTGTGCTTGGGTTTTTGCAGCGGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | GCCCAGTATGTAGTCCCCTTGTGCCTTGAATTGCTGTaGCAGACACAAAGAGGCCCCCATCCCAAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AQYVVPLCLELL*QTQRGPHPKLQ Trigger: CTGGAGCTTGGGATGGGGGCCTCTTTGTGTCTGTCACAGCAATTCAAGGCACAAGGGGACTACATACTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | TGTTGCACGGGATGCTGTTGGGTTGTGTTCTCTGGTTaGGAGTGGCCTCCTCGGTTGAGCCCAGGGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: CCTGCCWVVFSG*EWPPRLSPGEI Trigger: TATTTCCCCTGGGCTCAACCGAGGAGGCCACTCTCAACCAGAGAACACAACCCAACAGCATCCCGTGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | CATCATCACTCCCTAAGGCGGCCACCCAGTTCCAGCTaGAGTTCTGCAACAGAGTCACAACTGCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HHHSLRRPPSSS*SSATESQLPAA Trigger: AGCTGCAGGCAGTTGTGACTCTGTTGCAGAACTTCAGCTGGAACTGGGTGGCCGCCTTAGGGAGTGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | GCACAGTGCCCACACGGGCAATATTGGGAAGTGTCATaGCCAGGTCAGATGTCAGCCAAGACTCACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AQCPHGQYWEVS*PGQMSAKTHWP Trigger: TGGCCAGTGAGTCTTGGCTGACATCTGACCTGGTCATGACACTTCCCAATATTGCCCGTGTGGGCACTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | AAGCCAGAAACTTGGGCCTGCGAGGTAAGCAGGCTGTaGTTTTCTCTGGGGACCACTGGTCCTGGTTACATG | + |
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Preference number: 6 (lower is better) Translates to: KPETWACEVSRL*FSLGTTGPGYM Trigger: CATGTAACCAGGACCAGTGGTCCCCAGAGAAAAGCACAGCCTGCTTACCTCGCAGGCCCAAGTTTCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | TCAAATACCAGGCACATAGTGCTGCCTCCACAAAAGTaGCCAACAGTACCACTAGCCAGGCCCAGAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SNTRHIVLPPQK*PTVPLARPRVP Trigger: GGGGACTCTGGGCCTGGCTAGTGGTACTGTTGGCCACTTTTGTGGAGGCAGCACTATGTGCCTGGTATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CAA 72 bp | GCCATGGCCAGGAACAAACCAAGGGGTGAGAACCTGTaGCACGGGATGCTGTTGGGTTGTGTTCTCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AMARNKPRGENL*HGMLLGCVLWL Trigger: CAACCAGAGAACACAACCCAACAGCATCCCGTGCAACAGGTTCTCACCCCTTGGTTTGTTCCTGGCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CAA 72 bp | ACCAGGCCCTCATGTGCGATGCAGATACCTCGTGCATaGGCCAGACTAGAAAAGATGCTCAGACCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: TRPSCAMQIPRA*ARLEKMLRPSR Trigger: CCGGGAAGGTCTGAGCATCTTTTCTAGTCTGGCCAATGCACGAGGTATCTGCATCGCACATGAGGGCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CAA 72 bp | GCCTCACCACCGCCACTGTTCTCATCTGCTGCTTTCTaGGCATTCCTTCCCAGGAAGAACTCCTGGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASPPPLFSSAAF*AFLPRKNSWVL Trigger: CAACACCCAGGAGTTCTTCCTGGGAAGGAATGCCAAGAAAGCAGCAGATGAGAACAGTGGCGGTGGTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | TGGCACCAGGCCCTCATGTGCGATGCAGATACCTCGTaGATTGGCCAGACTAGAAAAGATGCTCAGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: WHQALMCDADTS*IGQTRKDAQTF Trigger: GAAGGTCTGAGCATCTTTTCTAGTCTGGCCAATGCACGAGGTATCTGCATCGCACATGAGGGCCTGGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | AGAAAGCAGAGGAAAGCTAACATTGCATTGGTGATGTaGACCAAGCCCAGGCTGACCCAGGAACGCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: RKQRKANIALVM*TKPRLTQERTW Trigger: CCACGTGCGTTCCTGGGTCAGCCTGGGCTTGGTGCACATCACCAATGCAATGTTAGCTTTCCTCTGCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | AAGCAGGCTGTGCTTTTCTCTGGGGACCACTGGTCCTaGTTACATGGAGTACAGGTGAAGTCATCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: KQAVLFSGDHWS*LHGVQVKSSGC Trigger: GCATCCAGATGACTTCACCTGTACTCCATGTAACCAGGACCAGTGGTCCCCAGAGAAAAGCACAGCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | CGAGGTAAGCAGGCTGTGCTTTTCTCTGGGGACCACTaGTCCTGGTTACATGGAGTACAGGTGAAGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RGKQAVLFSGDH*SWLHGVQVKSS Trigger: AGATGACTTCACCTGTACTCCATGTAACCAGGACCAGTGGTCCCCAGAGAAAAGCACAGCCTGCTTACCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | ATTCCTTCCCAGGAAGAACTCCTGGGTGTTGAGCTTTaGCAGCCAAAGAAGCACATAGCACTTGGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: IPSQEELLGVEL*QPKKHIALGQV Trigger: CACCTGCCCAAGTGCTATGTGCTTCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCTTCCTGGGAAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | TGTCAGCCAAGACTCACTGGCCACCCATACCTTGGGTaGGAGGCCATGATGGATGCTGTAACTAAAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CQPRLTGHPYLG*EAMMDAVTKKG Trigger: TCCCTTTTTAGTTACAGCATCCATCATGGCCTCTCACCCAAGGTATGGGTGGCCAGTGAGTCTTGGCTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS TCA 72 bp | TCTTGGCATTCCTTCCCAGGAAGAACTCCTGGGTGTTaGGCTTTGGCAGCCAAAGAAGCACATAGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SWHSFPGRTPGC*ALAAKEAHSTW Trigger: CCAAGTGCTATGTGCTTCTTTGGCTGCCAAAGCTCAACACCCAGGAGTTCTTCCTGGGAAGGAATGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | GCAGAGGCAAACAGCACCACCACTTGTACTTTACTTTaGTTCACTTGGCGTAGTACATCCAGCACCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AEANSTTTCTLL*FTWRSTSSTLP Trigger: GGGCAAGGTGCTGGATGTACTACGCCAAGTGAACCAAAGTAAAGTACAAGTGGTGGTGCTGTTTGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | TGTGCTTTTCTCTGGGGACCACTGGTCCTGGTTACATaGAGTACAGGTGAAGTCATCTGGATGCTTCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: CAFLWGPLVLVT*STGEVIWMLPV Trigger: TACCGGAAGCATCCAGATGACTTCACCTGTACTCCATGTAACCAGGACCAGTGGTCCCCAGAGAAAAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CAA 72 bp | TGCAAAAACCCAAGCACAGTGCCCACACGGGCAATATaGGGAAGTGTCATGACCAGGTCAGATGTCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: CKNPSTVPTRAI*GSVMTRSDVSQ Trigger: TTGGCTGACATCTGACCTGGTCATGACACTTCCCAATATTGCCCGTGTGGGCACTGTGCTTGGGTTTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | AAGGTGCCCACAGTATGTAATACAGGTGTAGGGCTCTaGCACACCCACATCTTCAGGTCATATTCCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: KVPTVCNTGVGL*HTHIFRSYSMS Trigger: AGACATGGAATATGACCTGAAGATGTGGGTGTGGCAGAGCCCTACACCTGTATTACATACTGTGGGCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | AATATTTGGTGGTGCAATTGCCCAGCTGATAGGTTCTaGAACAGCCCAGATGATAGGTTCTGCAGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: NIWWCNCPADRF*NSPDDRFCSMM Trigger: CATCATGCTGCAGAACCTATCATCTGGGCTGTTGCAGAACCTATCAGCTGGGCAATTGCACCACCAAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS GCA 72 bp | GCATGGAAACTCATATTGTACATGTTCTCCAGGAGCTaGCAGGGTAGAACATGTTCTGATACGTGGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: AWKLILYMFSRS*QGRTCSDTWQC Trigger: ACATTGCCACGTATCAGAACATGTTCTACCCTGGCAGCTCCTGGAGAACATGTACAATATGAGTTTCCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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| CDS CCA 72 bp | CCTTCAGCATCAAACTGTAGTGTCAAGTCTCGAGCATaGAAACTCATATTGTACATGTTCTCCAGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSASNCSVKSRA*KLILYMFSRSC Trigger: GCAGCTCCTGGAGAACATGTACAATATGAGTTTCCATGCTCGAGACTTGACACTACAGTTTGATGCTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030949.4 |
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