Pregenerated sensors for TAS1R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028738Ensembl transcript IDs: ENSMUST00000030510.14, ENSMUST00000166773.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCATGGTTGGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATaGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TMVGLTATLAMSRKA*ATAPQVLSMATRWQ Trigger: CTGCCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACCAACCATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR CCA 90 bp | GCAGGTGCTCTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTaGAGCCACATAGGTCACCTTGGTGGTTTCTTCCATAAGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: AGALYGHQMAVVGHP*SHIGHLGGFFHKWV Trigger: CACCCACTTATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAGAGCACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACGGAACACCGGGAGCGTaGCTGGGGGCTCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LYGHQMAVVGHPWSHIGHGTPGA*LGALLL Trigger: CAGCAGCAGAGCCCCCAGCCACGCTCCCGGTGTTCC...GTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACGTGGTGGGCCATCCTTaGAGCCACATAGGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: SHEQEGMGHSPAGALYGHVVGHP*SHIGHL Trigger: AAGGTGACCTATGTGGCTCCAAGGATGGCCCACCAC...GTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGTGGAGGAGGGGGCAGTaGGAGTGCATTATGGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LTATLAMSRKAWATAPQVWRRGQ*ECIMGN Trigger: ATTACCCATAATGCACTCCCACTGCCCCCTCCTCCA...CACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR CCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGAGTGGGAGTGCATTATaGGTAATTTCAAGAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: GLTATLAMSRKAWATAPQSGSAL*VISRAM Trigger: CATAGCTCTTGAAATTACCCATAATGCACTCCCACT...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR TCA 90 bp | GGCCATCCTTGGAGCCACATAGGTCACCTTGGTGGTTTCTTCCATAAGTGGGTGCACTGCAAAGAATGCTaGGGAACAAGGAACACCGGG | + |
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Preference number: 2 (lower is better) Translates to: GHPWSHIGHLGGFFHKWVHCKEC*GTRNTG Trigger: CCCGGTGTTCCTTGTTCCTCAGCATTCTTTGCAGTG...CACCCACTTATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR-3UTR GCA 90 bp | ATTAACAGACATCTGGAGAGCACAGTAGCCACCATGGTTGGTCTCACAGCCACAAGGGGGCAGTGGGAGTaGATTATGGGTAATTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: INRHLESTVATMVGLTATRGQWE*IMGNFK Trigger: CTTGAAATTACCCATAATGCACTCCCACTGCCCCCT...TGTGGCTGTGAGACCAACCATGGTGGCTACTGTGCTCTCCAGATGTCTGTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR CCA 72 bp | GGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATaGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GRHGPQPRRCSL*PPDGSGGPSLE Trigger: CTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR CCA 72 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATaGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: GLTATLAMSRKA*ATAPQVLSMAT Trigger: GGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR CCA 72 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTaGAGCCACATAGGTCACCTTGGTGGTTTCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LYGHQMAVVGHP*SHIGHLGGFFH Trigger: ATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGGCATCAGGAAGCACATaGGGCCGCCCGCCGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWASGST*GRPPSA Trigger: TGCGCTCGGCGGGCGGCCCCATGTGCTTCCTGATGC...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGTGGCGCTGGGCACAGTaGGCAGCATGGCAGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWWRWAQ*AAWQGS Trigger: GCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCA...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGGCACTCGGAACTGGCTaGAGCCAGGGATGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWALGTG*SQGWTP Trigger: GGGTGTCCATCCCTGGCTTCAGCCAGTTCCGAGTGC...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGACCATGGCCTCGATGTaGTGGGTGGCGCTGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWTMASM*WVALGT Trigger: TGTGCCCAGCGCCACCCACCACATCGAGGCCATGGT...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | GCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGCAGTGGTGGTGGCTCAGGCCCCATTaGCACTGGATGATGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AWATAPQVLSMATRWQWWWLRPH*HWMMSR Trigger: CCTGGACATCATCCAGTGGCAATGGGGCCTGAGCCA...CCACCACTGCCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGCGGACCTGGTTGCAGTaGAGGAGTCTGTGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLTATLAMSRKAWATAPQRTWLQ*RSLWRV Trigger: CACCCTCCACAGACTCCTCCACTGCAACCAGGTCCG...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | ACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGACACCCTCTGGATGGTaGCGCCCAGGAAAGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TLAMSRKAWATAPQVLSMTPSGW*RPGKCP Trigger: CGGGCACTTTCCTGGGCGTCACCATCCAGAGGGTGT...CATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGTGCAGCGGACCTGGTTaGAGTGGAGGAGTCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GLTATLAMSRKAWATAPQCSGPG*SGGVCG Trigger: TCCACAGACTCCTCCACTGCAACCAGGTCCGCTGCA...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGGGAGTAGGAGGCGATaGTTTGGAAGGGGTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLTATLAMSRKAWATAPQGSRRR*FGRGSG Trigger: GCCAGAACCCCTTCCAAAGCATCGCCTCCTACTCCC...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCCATCAGTTGCACCATaGCCTCGATGTGGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SHEQEGMGHSPAGALYGHPSVAP*PRCGGW Trigger: CCACCCACCACATCGAGGCCATGGTGCAACTGATGG...GTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGCTTTGGAAGGGGTTCTaGCTCAGGCCCCATTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWLWKGF*LRPHCH Trigger: GTGGCAATGGGGCCTGAGCCAGAACCCCTTCCAAAG...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | CTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGTGTGGCGCAGCTCTGTaGGGTTGTGTAGAACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTATLAMSRKAWATAPQVCGAAL*GCVEQG Trigger: ACCCTGTTCTACACAACCTCACAGAGCTGCGCCACA...CACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACATGGCCTCGATGTGGTaGGTGGCGCTGGGCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYGHQMAVVGHPWSHIGHMASMW*VALGTV Trigger: CACTGTGCCCAGCGCCACCCACCACATCGAGGCCAT...GTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | CTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGAGGCCCCATTGCCACTaGATGATGTCCAGGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LTATLAMSRKAWATAPQVRPHCH*MMSRSI Trigger: GATGCTCCTGGACATCATCCAGTGGCAATGGGGCCT...CACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGGCAGGAGAGGATTATaGTATTGGGGTCATCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLTATLAMSRKAWATAPQGRRGL*YWGHRG Trigger: ACCCCGATGACCCCAATATCATAATCCTCTCCTGCC...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | GCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGCAGTGGTGGAGCGTGAAGTTGACATaGCAGATCTCCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AWATAPQVLSMATRWQWWSVKLT*QISLSS Trigger: GCTACTCAGGGAGATCTGGCATGTCAACTTCACGCT...CCACCACTGCCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCTTCGTTGTAGTTGGTaGGCAGTTCCTTGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: SHEQEGMGHSPAGALYGHLRCSW*AVPCPR Trigger: ACGTGGGCAAGGAACTGCCCACCAACTACAACGAAG...GTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | ACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTGGCTTCGTTGTAGTTaGTGGGCAGTTCCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TATLAMSRKAWATAPQVLWLRCS*WAVPCP Trigger: TGGGCAAGGAACTGCCCACCAACTACAACGAAGCCA...GAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACGCACCTGCAGGTAGCTaGGGTGAGAGACGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LYGHQMAVVGHPWSHIGHAPAGS*GERRSS Trigger: TGAAGAGCGTCTCTCACCTCAGCTACCTGCAGGTGC...GTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | AGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACCAGATGGAATGTCTCCAGAAGATaGGCAGAATGGCCAGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: SRKAWATAPQVLSMATRWNVSRR*AEWPAY Trigger: GTACGCTGGCCATTCTGCTCATCTTCTGGAGACATT...CCATCTGGTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | ACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCGGCTTAGGCAGAGCATaGAGCAGGAGAAACAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TATLAMSRKAWATAPQVLGLGRA*SRRNSK Trigger: TTTGCTGTTTCTCCTGCTGCATGCTCTGCCTAAGCC...GAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | ACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACGGAAGGAGCGCACCGTaGTGCAGGAGAGGCAGACGG | + |
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Preference number: 4 (lower is better) Translates to: TQESQSVLPRNRNETQINGRSAP*CRRGRR Trigger: CCGTCTGCCTCTCCTGCATCACGGTGCGCTCCTTCC...GTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGCTATTGAAATAAGCTaGAGTGTTGCGCTCCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GLTATLAMSRKAWATAPQAIEIS*SVALRV Trigger: TACCCGGAGCGCAACACTTCAGCTTATTTCAATAGC...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | ACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACCCTCGATGTGGTGGGTaGCGCTGGGCACAGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: TQESQSVLPRNRNETQINPRCGG*RWAQCA Trigger: TGCGCACTGTGCCCAGCGCCACCCACCACATCGAGG...GTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | ACCATTAGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACATGGTGGCCAGCATGTTaGCTGCCACCAGGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: TIRTQESQSVLPRNRNETWWPAC*LPPGPP Trigger: AGGTGGCCCTGGTGGCAGGCAACATGCTGGCCACCA...TGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGTTCTAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACAGGAGAAACAGCAAATaGAGTGTCCTCGCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LYGHQMAVVGHPWSHIGHRRNSK*SVLAWG Trigger: ACCCCAGGCGAGGACACTCCATTTGCTGTTTCTCCT...GTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | CTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACACTGGCTGTAGTCTTTaGGGATGGGCAGGAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LYGHQMAVVGHPWSHIGHTGCSL*GWAGSH Trigger: ATGACTTCCTGCCCATCCTCAAAGACTACAGCCAGT...GTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | TTCGGGGATTGGAGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCCGGAGAAGCAAACGGTaGAGAAAGCCTGGCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FGDWRRGQWECIMGNFKSRRSKR*RKPGGR Trigger: TCTGCCGCCAGGCTTTCTTCACCGTTTGCTTCTCCG...GCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCTCCAATCCCCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | TGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGACATCTGGAGAGCACAGGGCCAGCATGTTGCCTaGCACCAGGGCCACCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CSPGTGMKHRLTDIWRAQGQHVA*HQGHLD Trigger: GTCAAGGTGGCCCTGGTGGCAGGCAACATGCTGGCC...CTGTGCTCTCCAGATGTCTGTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| 3UTR CAA 72 bp | TCTCTATGGCCACCAGATGGCAGTGGTGGGCCATCCTaGGAGCCACATAGGTCACCTTGGTGGTTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLWPPDGSGGPS*EPHRSPWWFLP Trigger: TGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR TCA 90 bp | CTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCCTGAATCATGCTATTaGAATAAGCTGAAGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LTATLAMSRKAWATAPQVPESCY*NKLKCC Trigger: GCAACACTTCAGCTTATTTCAATAGCATGATTCAGG...CACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | CATCCTTGGAGCCACATAGGTCACCTTGGTGGTTTCTTCCATAAGTGGGTGGTATTGTCCAGTTGGTCCTaGTCCTCAGGCCTCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: HPWSHIGHLGGFFHKWVVLSSWS*SSGLTA Trigger: GGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAA...TACCACCCACTTATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR GCA 90 bp | AGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTTCGCGGAAGAAGTTGTaGAGGCTCAGCTCTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RTQESQSVLPRNRNETQISRKKL*RLSSGE Trigger: CTCGCCAGAGCTGAGCCTGCACAACTTCTTCCGCGA...AATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | TATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACCTTACAGGCAGAACCTCCTaGAAGGCAATGCAGATATCG | + |
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Preference number: 4 (lower is better) Translates to: YGHQMAVVGHPWSHIGHLTGRTS*KAMQIS Trigger: CGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGT...AAGGTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | TTCGGGGATTGGAGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCAGGATGTTGTCCAGTTaGTCCTGCTCCTCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FGDWRRGQWECIMGNFKSRMLSS*SCSSGL Trigger: GAGGCCTGAGGAGCAGGACCAACTGGACAACATCCT...GCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCTCCAATCCCCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS-3UTR CCA 90 bp | AGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCTATGTGGGTAAACAGTGGAGGAGTCTGTaGAGGGTGTGGGCTACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRGQWECIMGNFKSYVGKQWRSL*RVWATA Trigger: CGCGGTAGCCCACACCCTCCACAGACTCCTCCACTG...TTTACCCACATAGCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CCA 90 bp | CATGATGCTCATCTGACCATTAGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGTCGTCGAAGAAGAGCTaGTTGCCCAGGAGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HDAHLTIRTQESQSVLPRSSKKS*LPRSVK Trigger: CTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGA...CCTGGGGAGCACAGACTGGGACTCCTGTGTTCTAATGGTCAGATGAGCATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR TCA 90 bp | AGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTGGCGTCTGGCCATCTTaGAGACGCACACAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTQESQSVLPRNRNETQIGVWPS*RRTQSG Trigger: TCCAGATTGTGTGCGTCTTCAAGATGGCCAGACGCC...AATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR TCA 90 bp | ACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACCATCGTGGACAGACATaGACGTGCAGAGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TQESQSVLPRNRNETQINHRGQT*TCRGRW Trigger: CCATCTCCCTCTGCACGTTCATGTCTGTCCACGATG...GTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTGTAGAACAGGGTCGATaGCCCAGGACTCAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTQESQSVLPRNRNETQIVEQGR*PRTQRQ Trigger: TTGCCTCTGAGTCCTGGGCCATCGACCCTGTTCTAC...AATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR TCA 90 bp | CATGATGCTCATCTGACCATTAGAACACAGGAGTCCCAGTCTGTGCTCCCCAGGGAAGTCATCTATCTGTaGCAGGAAGTAGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HDAHLTIRTQESQSVLPREVIYL*QEVEPR Trigger: CCTGGGCTCTACTTCCTGTCACAGATAGATGACTTC...CCTGGGGAGCACAGACTGGGACTCCTGTGTTCTAATGGTCAGATGAGCATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR TCA 90 bp | ATTAACAGACATCTGGAGAGCACAGTAGCCACCATGGTTGGTCTCACAGCCACAAGTCCATGCTGGTGTTaGAGAGTAGCCCGTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: INRHLESTVATMVGLTATSPCWC*RVARCG Trigger: ACCGCAACGGGCTACTCTTCAACACCAGCATGGACT...TGTGGCTGTGAGACCAACCATGGTGGCTACTGTGCTCTCCAGATGTCTGTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGACATCTGGAGAGCACAGCTCTTCACGTTGGCATaGAGGGTAAAGAGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CSPGTGMKHRLTDIWRAQLFTLA*RVKRPP Trigger: GGGTGGCCTCTTTACCCTCCATGCCAACGTGAAGAG...CTGTGCTCTCCAGATGTCTGTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CCA 90 bp | ACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACACGGTGAAGAAAGCCTaGCGGCAGAAACAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQESQSVLPRNRNETQINTVKKA*RQKQEK Trigger: CTTCTCCTGTTTCTGCCGCCAGGCTTTCTTCACCGT...GTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCTATGTGGGTAAACAGTTCCACTGGAAGTaGACCATCAGTTGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RRGQWECIMGNFKSYVGKQFHWK*TISCTM Trigger: CATGGTGCAACTGATGGTTCACTTCCAGTGGAACTG...TTTACCCACATAGCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS GCA 90 bp | TCAGTTGCACCATGGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTaGGCAGCATGGCAGGGAAGCGCCGCTTGTCTCGCAGCTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVAPWPRCGGWRWAQ*AAWQGSAACLAACR Trigger: CCGACAAGCTGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | TCGTGGCGCACTCGGAACTGGCTGAAGCCAGGGATGGACACCCTCTaGATGGTGACGCCCAGGAAAGTGCCCGTGTGGCGCAGCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWRTRNWLKPGMDTL*MVTPRKVPVWRSSV Trigger: CACAGAGCTGCGCCACACGGGCACTTTCCTGGGCGTCACCATCCAGAGGGTGTCCATCCCTGGCTTCAGCCAGTTCCGAGTGCGCCACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | AGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACGTGCAGCGGACCTGGTaGCAGTGGAGGAGTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHEQEGMGHSPAGALYGHVQRTW*QWRSLW Trigger: CCACAGACTCCTCCACTGCAACCAGGTCCGCTGCAC...GTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS GCA 90 bp | AAGCCCAGGGCGGCCAGGATGGTCACCACGATAGTGGGCACTTCGTaGCACTCCAGGAAGGCCAGCCGCCGCTTGAAGCAAGCGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRAARMVTTIVGTS*HSRKASRRLKQAML Trigger: CAACATCGCTTGCTTCAAGCGGCGGCTGGCCTTCCTGGAGTGGCACGAAGTGCCCACTATCGTGGTGACCATCCTGGCCGCCCTGGGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS GCA 90 bp | GTCGGTCCGGCCAATGGGGTTGATGGTGGTGGCCAGCATGTTGCCTaGCACCAGGGCCACCTTGACGGCCGTGATGAAGGCCACAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGPANGVDGGGQHVA*HQGHLDGRDEGHKD Trigger: GTCTTTGTGGCCTTCATCACGGCCGTCAAGGTGGCCCTGGTGGCAGGCAACATGCTGGCCACCACCATCAACCCCATTGGCCGGACCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | AGTGAACCATCAGTTGCACCATGGCCTCGATGTGGTGGGTGGCGCTaGGCACAGTGCGCAGCATGGCAGGGAAGCGCCGCTTGTCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEPSVAPWPRCGGWR*AQCAAWQGSAACLA Trigger: TGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | GTTCCAGCGCAGCACCTCGCGGAAGAAGTTGTGCAGGCTCAGCTCTaGCGAGAATATCACCACCACACGCGCCGAGGTCCGCCGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPAQHLAEEVVQAQL*REYHHHTRRGPPQL Trigger: AAGCTGCGGCGGACCTCGGCGCGTGTGGTGGTGATATTCTCGCCAGAGCTGAGCCTGCACAACTTCTTCCGCGAGGTGCTGCGCTGGAAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | ACTGGAAGTGAACCATCAGTTGCACCATGGCCTCGATGTGGTGGGTaGCGCTGGGCACAGTGCGCAGCATGGCAGGGAAGCGCCGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGSEPSVAPWPRCGG*RWAQCAAWQGSAAC Trigger: ACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGAATGACGGCCACCACTaGGGGCCTGTACTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLTATLAMSRKAWATAPQNDGHH*GPVLAV Trigger: TACAGCCAGTACAGGCCCCAAGTGGTGGCCGTCATT...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGCCCAGGAGCGTGAAGTaGACATGCCAGATCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLTATLAMSRKAWATAPQPRSVK*TCQISL Trigger: CAGGGAGATCTGGCATGTCAACTTCACGCTCCTGGG...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTAGGAGGCGATGCTTaGGAAGGGGTTCTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLTATLAMSRKAWATAPQVGGDA*EGVLAQ Trigger: CTGAGCCAGAACCCCTTCCAAAGCATCGCCTCCTAC...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | GCACCACGATCCAGTTCCACTGGAAGTGAACCATCAGTTGCACCATaGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTGCGCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: APRSSSTGSEPSVAP*PRCGGWRWAQCAAW Trigger: CCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | TCGTTAGGCATGGGATACTCTGGCTTGTCGTGGCGCACTCGGAACTaGCTGAAGCCAGGGATGGACACCCTCTGGATGGTGACGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGMGYSGLSWRTRN*LKPGMDTLWMVTPR Trigger: CCTGGGCGTCACCATCCAGAGGGTGTCCATCCCTGGCTTCAGCCAGTTCCGAGTGCGCCACGACAAGCCAGAGTATCCCATGCCTAACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGTCGAAGAAGAGCTGGTaGCCCAGGAGCGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTATLAMSRKAWATAPQVSKKSW*PRSVKL Trigger: CAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGA...CACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | GGTCTCACAGCCACACTAGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGAAGTCCATGCTGGTGTaGAAGAGTAGCCCGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLTATLAMSRKAWATAPQKSMLV*KSSPLR Trigger: CCGCAACGGGCTACTCTTCAACACCAGCATGGACTT...CTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCTAGTGTGGCTGTGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS GCA 90 bp | GTAGCTGCCATGGATAGACGATTTGCTTGGTGCAGCGGACCTGGTTaGAGTGGAGGAGTCTGTGGAGGGTGTGGGCTACCGCGTAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAMDRRFAWCSGPG*SGGVCGGCGLPRRR Trigger: CCGTCTACGCGGTAGCCCACACCCTCCACAGACTCCTCCACTGCAACCAGGTCCGCTGCACCAAGCAAATCGTCTATCCATGGCAGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | GTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGGTTCTaGTACAGGCAGAACCTCCAGCACCACGATCCAGTTCCACTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VQLVLLLRPHGLVGF*YRQNLQHHDPVPLE Trigger: TTCCAGTGGAACTGGATCGTGGTGCTGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS TCA 90 bp | CAGGGTCGATGGCCCAGGACTCAGAGGCAATCCACACAAAGCCTGTaGAGTTCCAGCGCAGCACCTCGCGGAAGAAGTTGTGCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGRWPRTQRQSTQSL*SSSAAPRGRSCAGS Trigger: TGAGCCTGCACAACTTCTTCCGCGAGGTGCTGCGCTGGAACTTCACAGGCTTTGTGTGGATTGCCTCTGAGTCCTGGGCCATCGACCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS TCA 90 bp | GGTACAGGCAGAACCTCCAGCACCACGATCCAGTTCCACTGGAAGTaGACCATCAGTTGCACCATGGCCTCGATGTGGTGGGTGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGRTSSTTIQFHWK*TISCTMASMWWVAL Trigger: CAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGCTGGAGGTTCTGCCTGTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS GCA 90 bp | ACAAAGCCTGTGAAGTTCCAGCGCAGCACCTCGCGGAAGAAGTTGTaGAGGCTCAGCTCTGGCGAGAATATCACCACCACACGCGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TKPVKFQRSTSRKKL*RLSSGENITTTRAE Trigger: CTCGGCGCGTGTGGTGGTGATATTCTCGCCAGAGCTGAGCCTGCACAACTTCTTCCGCGAGGTGCTGCGCTGGAACTTCACAGGCTTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | TCAGGCCTCACGGCCTGGTTGGGTTCTGGTACAGGCAGAACCTCCTaGAAGGCAATGCAGATATCGCCAGTGTTGGTCAGACGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGLTAWLGSGTGRTS*KAMQISPVLVRRWL Trigger: GAGCCAGCGTCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | GTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGGTTCTaGTACAGGCAGAACCTCCTGGAAGGCAATGCAGATATCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VQLVLLLRPHGLVGF*YRQNLLEGNADIAS Trigger: ACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | AGCCATGAGCAGGAAGGCATGGGCCACAGCCCCGCAGGTGCTCTCTATGGCCACTTCATGTTGTACTCATaGCACTTGGGCACCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHEQEGMGHSPAGALYGHFMLYS*HLGTCR Trigger: CCTGCAGGTGCCCAAGTGCAATGAGTACAACATGAA...GTGGCCATAGAGAGCACCTGCGGGGCTGTGGCCCATGCCTTCCTGCTCATGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | CCGCTTGTCTCGCAGCTTGTCGGTGATGGCGCTATATGTGACCTGTaGCACGAGGAAGTAGGAGAGAATGTTGGACACGGTGATGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLVSQLVGDGAICDL*HEEVGENVGHGDGG Trigger: TCCGCCATCACCGTGTCCAACATTCTCTCCTACTTCCTCGTGCCACAGGTCACATATAGCGCCATCACCGACAAGCTGCGAGACAAGCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | GGATGTTGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTaGGTTCTGGTACAGGCAGAACCTCCTGGAAGGCAATGCAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: GCCPVGPAPQASRPG*VLVQAEPPGRQCRY Trigger: ATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | AAAGACGTAGGGCCCGTGGTAACGCATCCAGAAACCGTAGGCGCTTaGCAGGCGTCTGGCCATCTTGAAGACGCACACAATCTGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KDVGPVVTHPETVGA*QASGHLEDAHNLEG Trigger: TCCTTCCAGATTGTGTGCGTCTTCAAGATGGCCAGACGCCTGCCAAGCGCCTACGGTTTCTGGATGCGTTACCACGGGCCCTACGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | TTCGGGGATTGGAGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCATGGCGGACTCAGAGTaGTCTGGGCCAATGACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGDWRRGQWECIMGNFKSMADSE*SGPMTA Trigger: GGCCGTCATTGGCCCAGACAACTCTGAGTCCGCCAT...GCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCTCCAATCCCCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | TATGGCCACCAGATGGCAGTGGTGGGCCATCCTTGGAGCCACATAGGTCACCTTCATCGGCATGTCCCCTaGTTCGTCGAAGAAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YGHQMAVVGHPWSHIGHLHRHVP*FVEEEL Trigger: CAGCTCTTCTTCGACGAACAAGGGGACATGCCGATG...AAGGTGACCTATGTGGCTCCAAGGATGGCCCACCACTGCCATCTGGTGGCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGGGCAGTGGGAGTGCATTATGGGTAATTTCAAGAGCTATGTGGGTAAAGTGGTGGCCAGCATGTaGCCTGCCACCAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RRGQWECIMGNFKSYVGKVVASM*PATRAT Trigger: GGTGGCCCTGGTGGCAGGCAACATGCTGGCCACCAC...TTTACCCACATAGCTCTTGAAATTACCCATAATGCACTCCCACTGCCCCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | GTACAGGCAGAACCTCCTGGAAGGCAATGCAGATATCGCCAGTGTTaGTCAGACGCTGGCTCAGCAGGTGGCTGTTCTCTCGGCCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VQAEPPGRQCRYRQC*SDAGSAGGCSLGHN Trigger: ATTATGGCCGAGAGAACAGCCACCTGCTGAGCCAGCGTCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | ATGTCCAGGAGCATCGGCATGTCCCCTTGTTCGTCGAAGAAGAGCTaGTTGCCCAGGAGCGTGAAGTTGACATGCCAGATCTCCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSRSIGMSPCSSKKS*LPRSVKLTCQISLS Trigger: ACTCAGGGAGATCTGGCATGTCAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGAACAAGGGGACATGCCGATGCTCCTGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 90 bp | GTAGTCCCCAGCCAGGTGAAAGTCGGAGTTCCCTACCAGCATGACTaGCTTAGGCAGAGCATGCAGCAGGAGAAACAGCAAATGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVPSQVKVGVPYQHD*LRQSMQQEKQQMEC Trigger: ACACTCCATTTGCTGTTTCTCCTGCTGCATGCTCTGCCTAAGCCAGTCATGCTGGTAGGGAACTCCGACTTTCACCTGGCTGGGGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGACCAGGATGTTGTCCAGTaGGTCCTGCTCCTCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPSLCSPGTGMKHRLTDQDVVQ*VLLLRP Trigger: AGGCCTGAGGAGCAGGACCAACTGGACAACATCCTG...GTCTGTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | ATTAACAGACATCTGGAGAGCACAGTAGCCACCATGGTTGGTCTCACAGCCACATTGGTGGGCAGTTCCTaGCCCACGTACGCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INRHLESTVATMVGLTATLVGSS*PTYAKL Trigger: CAGCTTCGCGTACGTGGGCAAGGAACTGCCCACCAA...TGTGGCTGTGAGACCAACCATGGTGGCTACTGTGCTCTCCAGATGTCTGTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 90 bp | AGTCATCTATCTGTGACAGGAAGTAGAGCCCAGGCTGGATATTGTTaGAGAGGTAGCAGACATCCACCATCTCGTAGCCGAGCAGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLSVTGSRAQAGYC*RGSRHPPSRSRAAR Trigger: GCGTGCTGCTCGGCTACGAGATGGTGGATGTCTGCTACCTCTCCAACAATATCCAGCCTGGGCTCTACTTCCTGTCACAGATAGATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGGCGTCTGGCCATCTaGAAGACGCACACAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQESQSVLPRNRNETQINRRLAI*KTHTIW Trigger: CCAGATTGTGTGCGTCTTCAAGATGGCCAGACGCCT...GTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCCAGTCTGTGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGACCCGATGGCCAGAAAGTaGAGCACAGTGACCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPSLCSPGTGMKHRLTDPMARK*STVTRR Trigger: TCTCCTGGTCACTGTGCTCAACTTTCTGGCCATCGG...GTCTGTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCACAGACTGGGACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | CATCCTTGGAGCCACATAGGTCACCTTGGTGGTTTCTTCCATAAGTGGGTGGTACGCTTGTCTCGCAGCTaGTCGGTGATGGCGCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: HPWSHIGHLGGFFHKWVVRLSRS*SVMALY Trigger: ATATAGCGCCATCACCGACAAGCTGCGAGACAAGCG...TACCACCCACTTATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | TGCTCCCCAGGAACCGGAATGAAACACAGATTAACAGACATCTGGAGAGCACAGGAAGTGAACCATCAGTaGCACCATGGCCTCGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSPGTGMKHRLTDIWRAQEVNHQ*HHGLDV Trigger: CACATCGAGGCCATGGTGCAACTGATGGTTCACTTC...CTGTGCTCTCCAGATGTCTGTTAATCTGTGTTTCATTCCGGTTCCTGGGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS-3UTR CAA 90 bp | CATCCTTGGAGCCACATAGGTCACCTTGGTGGTTTCTTCCATAAGTGGGTGGTAGAGAGGATTATGATATaGGGGTCATCGGGGTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPWSHIGHLGGFFHKWVVERIMI*GSSGSV Trigger: GACCGACCCCGATGACCCCAATATCATAATCCTCTC...TACCACCCACTTATGGAAGAAACCACCAAGGTGACCTATGTGGCTCCAAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS TCA 90 bp | GTACTGGCTGTAGTCTTTGAGGATGGGCAGGAAGTCATCTATCTGTaGCAGGAAGTAGAGCCCAGGCTGGATATTGTTGGAGAGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLAVVFEDGQEVIYL*QEVEPRLDIVGEVA Trigger: TGCTACCTCTCCAACAATATCCAGCCTGGGCTCTACTTCCTGTCACAGATAGATGACTTCCTGCCCATCCTCAAAGACTACAGCCAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS TCA 90 bp | GCTCTTCCTCATCGTGTAGCCCTGAATCATGCTATTGAAATAAGCTaGAGTGTTGCGCTCCGGGTAGAAAAGGATCATGTAACACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPHRVALNHAIEIS*SVALRVEKDHVTLG Trigger: CCCAAGTGTTACATGATCCTTTTCTACCCGGAGCGCAACACTTCAGCTTATTTCAATAGCATGATTCAGGGCTACACGATGAGGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS GCA 72 bp | CCATGGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTaGGCAGCATGGCAGGGAAGCGCCGCTTGTCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWPRCGGWRWAQ*AAWQGSAACLA Trigger: TGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | TCAGTTGCACCATGGCCTCGATGTGGTGGGTGGCGCTaGGCACAGTGCGCAGCATGGCAGGGAAGCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVAPWPRCGGWR*AQCAAWQGSAA Trigger: AGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | ACACGCGCCGAGGTCCGCCGCAGCTTGTCCAGGATGTaGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRAEVRRSLSRM*SSWSCSSGLTA Trigger: GGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCTGGACAAGCTGCGGCGGACCTCGGCGCGTGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | CGAGGTCCGCCGCAGCTTGTCCAGGATGTTGTCCAGTaGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPPQLVQDVVQ*VLLLRPHGLVG Trigger: CCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCTGGACAAGCTGCGGCGGACCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | GTCCGGCCAATGGGGTTGATGGTGGTGGCCAGCATGTaGCCTGCCACCAGGGCCACCTTGACGGCCGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VRPMGLMVVASM*PATRATLTAVM Trigger: CATCACGGCCGTCAAGGTGGCCCTGGTGGCAGGCAACATGCTGGCCACCACCATCAACCCCATTGGCCGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | TGGGTGGCGCTGGGCACAGTGCGCAGCATGGCAGGGAAGCGCCGCTaGTCTCGCAGCTTGTCGGTGATGGCGCTATATGTGACCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WVALGTVRSMAGKRR*SRSLSVMALYVTCG Trigger: GCCACAGGTCACATATAGCGCCATCACCGACAAGCTGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAGCGCCACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | ATCACCACCACACGCGCCGAGGTCCGCCGCAGCTTGTCCAGGATGTaGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ITTTRAEVRRSLSRM*SSWSCSSGLTAWLG Trigger: ACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCTGGACAAGCTGCGGCGGACCTCGGCGCGTGTGGTGGTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS GCA 72 bp | GCGGCCAGGATGGTCACCACGATAGTGGGCACTTCGTaGCACTCCAGGAAGGCCAGCCGCCGCTTGAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AARMVTTIVGTS*HSRKASRRLKQ Trigger: TTGCTTCAAGCGGCGGCTGGCCTTCCTGGAGTGGCACGAAGTGCCCACTATCGTGGTGACCATCCTGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | GAGGTCCGCCGCAGCTTGTCCAGGATGTTGTCCAGTTaGTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: EVRRSLSRMLSS*SCSSGLTAWLG Trigger: ACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCTGGACAAGCTGCGGCGGACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | CACATGGGGCCGCCCGCCGAGCGCACCATGGGCGTCTaGAAATGTCTCCAGAAGATGAGCAGAATGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HMGPPAERTMGV*KCLQKMSRMAS Trigger: GCTGGCCATTCTGCTCATCTTCTGGAGACATTTCCAGACGCCCATGGTGCGCTCGGCGGGCGGCCCCATGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS GCA 72 bp | CGCCGCAGCTTGTCCAGGATGTTGTCCAGTTGGTCCTaGTCCTCAGGCCTCACGGCCTGGTTGGGTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSLSRMLSSWS*SSGLTAWLGSG Trigger: ACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCTGGACAAGCTGCGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | CAGCACCTCGCGGAAGAAGTTGTGCAGGCTCAGCTCTaGCGAGAATATCACCACCACACGCGCCGAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: QHLAEEVVQAQL*REYHHHTRRGP Trigger: CGGACCTCGGCGCGTGTGGTGGTGATATTCTCGCCAGAGCTGAGCCTGCACAACTTCTTCCGCGAGGTGCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | CCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTaGGTTCTGGTACAGGCAGAACCTCCAGCACCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PVGPAPQASRPG*VLVQAEPPAPR Trigger: TCGTGGTGCTGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | CGCAGCATGGCAGGGAAGCGCCGCTTGTCTCGCAGCTaGTCGGTGATGGCGCTATATGTGACCTGTGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSMAGKRRLSRS*SVMALYVTCGT Trigger: CGTGCCACAGGTCACATATAGCGCCATCACCGACAAGCTGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | CTGGGCACAGTGCGCAGCATGGCAGGGAAGCGCCGCTaGTCTCGCAGCTTGTCGGTGATGGCGCTATATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGTVRSMAGKRR*SRSLSVMALYV Trigger: CACATATAGCGCCATCACCGACAAGCTGCGAGACAAGCGGCGCTTCCCTGCCATGCTGCGCACTGTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | TCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTaGGGTTCTGGTACAGGCAGAACCTCCAGCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSCSSGLTAW*GSGTGRTSSTT Trigger: CGTGGTGCTGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | GCTCACCAGCACCACGATCCAGTTCCACTGGAAGTGAACCATCAGTaGCACCATGGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AHQHHDPVPLEVNHQ*HHGLDVVGGAGHSA Trigger: CGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGCTGGTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 72 bp | CCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTTaGGTTCTGGTACAGGCAGAACCTCCTGGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PVGPAPQASRPG*VLVQAEPPGRQ Trigger: TTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 72 bp | GGCAGGCGTCTGGCCATCTTGAAGACGCACACAATCTaGAAGGAGCGCACCGTGATGCAGGAGAGGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: GRRLAILKTHTI*KERTVMQERQT Trigger: CGTCTGCCTCTCCTGCATCACGGTGCGCTCCTTCCAGATTGTGTGCGTCTTCAAGATGGCCAGACGCCTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | GTCCTGCTCCTCAGGCCTCACGGCCTGGTTGGGTTCTaGTACAGGCAGAACCTCCAGCACCACGATCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLLRPHGLVGF*YRQNLQHHDPV Trigger: AACTGGATCGTGGTGCTGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | TTGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTaGTTGGGTTCTGGTACAGGCAGAACCTCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSWSCSSGLTA*LGSGTGRTSST Trigger: GGTGCTGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | TCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTaGGGTTCTGGTACAGGCAGAACCTCCTGGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSWSCSSGLTAW*GSGTGRTSWKA Trigger: TGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CAA 90 bp | ATGGTGACGCCCAGGAAAGTGCCCGTGTGGCGCAGCTCTGTGAGGTaGTGTAGAACAGGGTCGATGGCCCAGGACTCAGAGGCAATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MVTPRKVPVWRSSVR*CRTGSMAQDSEAIH Trigger: GTGGATTGCCTCTGAGTCCTGGGCCATCGACCCTGTTCTACACAACCTCACAGAGCTGCGCCACACGGGCACTTTCCTGGGCGTCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | AACCTCCAGCACCACGATCCAGTTCCACTGGAAGTGAACCATCAGTaGCACCATGGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: NLQHHDPVPLEVNHQ*HHGLDVVGGAGHSA Trigger: CGCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGCTGGAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
||
| CDS GCA 72 bp | GCGATGCTTTGGAAGGGGTTCTGGCTCAGGCCCCATTaGCACTGGATGATGTCCAGGAGCATCGGCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AMLWKGFWLRPH*HWMMSRSIGMS Trigger: GGACATGCCGATGCTCCTGGACATCATCCAGTGGCAATGGGGCCTGAGCCAGAACCCCTTCCAAAGCATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | TCCAGTTCCACTGGAAGTGAACCATCAGTTGCACCATaGCCTCGATGTGGTGGGTGGCGCTGGGCACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTGSEPSVAP*PRCGGWRWAQC Trigger: GCACTGTGCCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | TTGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTaGTTGGGTTCTGGTACAGGCAGAACCTCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSWSCSSGLTA*LGSGTGRTSWK Trigger: CTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CCA 72 bp | ATGGGATACTCTGGCTTGTCGTGGCGCACTCGGAACTaGCTGAAGCCAGGGATGGACACCCTCTGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MGYSGLSWRTRN*LKPGMDTLWMV Trigger: CACCATCCAGAGGGTGTCCATCCCTGGCTTCAGCCAGTTCCGAGTGCGCCACGACAAGCCAGAGTATCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CCA 72 bp | GGGCCCGTGGTAACGCATCCAGAAACCGTAGGCGCTTaGCAGGCGTCTGGCCATCTTGAAGACGCACACAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPVVTHPETVGA*QASGHLEDAHN Trigger: ATTGTGTGCGTCTTCAAGATGGCCAGACGCCTGCCAAGCGCCTACGGTTTCTGGATGCGTTACCACGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | GAGAGAATGTTGGACACGGTGATGGCGGACTCAGAGTaGTCTGGGCCAATGACGGCCACCACTTGGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ERMLDTVMADSE*SGPMTATTWGL Trigger: CAGGCCCCAAGTGGTGGCCGTCATTGGCCCAGACAACTCTGAGTCCGCCATCACCGTGTCCAACATTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | CACCACGATCCAGTTCCACTGGAAGTGAACCATCAGTaGCACCATGGCCTCGATGTGGTGGGTGGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HHDPVPLEVNHQ*HHGLDVVGGAG Trigger: CCCAGCGCCACCCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | GGCGATGCTTTGGAAGGGGTTCTGGCTCAGGCCCCATaGCCACTGGATGATGTCCAGGAGCATCGGCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDALEGVLAQAP*PLDDVQEHRHV Trigger: GACATGCCGATGCTCCTGGACATCATCCAGTGGCAATGGGGCCTGAGCCAGAACCCCTTCCAAAGCATCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | GGTGATGGCGGACTCAGAGTTGTCTGGGCCAATGACGGCCACCACTaGGGGCCTGTACTGGCTGTAGTCTTTGAGGATGGGCAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDGGLRVVWANDGHH*GPVLAVVFEDGQEV Trigger: GACTTCCTGCCCATCCTCAAAGACTACAGCCAGTACAGGCCCCAAGTGGTGGCCGTCATTGGCCCAGACAACTCTGAGTCCGCCATCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | GCCCCATTGCCACTGGATGATGTCCAGGAGCATCGGCATGTCCCCTaGTTCGTCGAAGAAGAGCTGGTTGCCCAGGAGCGTGAAGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: APLPLDDVQEHRHVP*FVEEELVAQEREVD Trigger: GTCAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGAACAAGGGGACATGCCGATGCTCCTGGACATCATCCAGTGGCAATGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS GCA 72 bp | ATGGATAGACGATTTGCTTGGTGCAGCGGACCTGGTTaGAGTGGAGGAGTCTGTGGAGGGTGTGGGCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: MDRRFAWCSGPG*SGGVCGGCGLP Trigger: CGGTAGCCCACACCCTCCACAGACTCCTCCACTGCAACCAGGTCCGCTGCACCAAGCAAATCGTCTATCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | GGACTCAGAGTTGTCTGGGCCAATGACGGCCACCACTaGGGGCCTGTACTGGCTGTAGTCTTTGAGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLRVVWANDGHH*GPVLAVVFEDG Trigger: CCCATCCTCAAAGACTACAGCCAGTACAGGCCCCAAGTGGTGGCCGTCATTGGCCCAGACAACTCTGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 72 bp | CCACTGGATGATGTCCAGGAGCATCGGCATGTCCCCTaGTTCGTCGAAGAAGAGCTGGTTGCCCAGGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PLDDVQEHRHVP*FVEEELVAQER Trigger: ACGCTCCTGGGCAACCAGCTCTTCTTCGACGAACAAGGGGACATGCCGATGCTCCTGGACATCATCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS CAA 90 bp | AGGATGTTGTCCAGTTGGTCCTGCTCCTCAGGCCTCACGGCCTGGTaGGGTTCTGGTACAGGCAGAACCTCCTGGAAGGCAATGCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: RMLSSWSCSSGLTAW*GSGTGRTSWKAMQI Trigger: TATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGTGAGGCCTGAGGAGCAGGACCAACTGGACAACATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS CAA 90 bp | TCCAGGAGCATCGGCATGTCCCCTTGTTCGTCGAAGAAGAGCTGGTaGCCCAGGAGCGTGAAGTTGACATGCCAGATCTCCCTGAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSIGMSPCSSKKSW*PRSVKLTCQISLSS Trigger: GCTACTCAGGGAGATCTGGCATGTCAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGAACAAGGGGACATGCCGATGCTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
||
| CDS TCA 72 bp | TCGCTCACCAGCACCACGATCCAGTTCCACTGGAAGTaGACCATCAGTTGCACCATGGCCTCGATGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLTSTTIQFHWK*TISCTMASMWW Trigger: CCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGCTGGTGAGCGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
||
| CDS TCA 72 bp | TGGCCCAGGACTCAGAGGCAATCCACACAAAGCCTGTaGAGTTCCAGCGCAGCACCTCGCGGAAGAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WPRTQRQSTQSL*SSSAAPRGRSC Trigger: ACAACTTCTTCCGCGAGGTGCTGCGCTGGAACTTCACAGGCTTTGTGTGGATTGCCTCTGAGTCCTGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS GCA 72 bp | GTGAAGTTCCAGCGCAGCACCTCGCGGAAGAAGTTGTaGAGGCTCAGCTCTGGCGAGAATATCACCACCACA | + |
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Preference number: 6 (lower is better) Translates to: VKFQRSTSRKKL*RLSSGENITTT Trigger: TGTGGTGGTGATATTCTCGCCAGAGCTGAGCCTGCACAACTTCTTCCGCGAGGTGCTGCGCTGGAACTTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CCA 72 bp | GAACCTCCTGGAAGGCAATGCAGATATCGCCAGTGTTaGTCAGACGCTGGCTCAGCAGGTGGCTGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EPPGRQCRYRQC*SDAGSAGGCSL Trigger: GAGAGAACAGCCACCTGCTGAGCCAGCGTCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS CCA 72 bp | ACCAGGAGATCCATGATGGTGACCAGCACGCCATCGTaGACAGACATGAACGTGCAGAGGGAGATGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TRRSMMVTSTPS*TDMNVQREMEE Trigger: CTCCTCCATCTCCCTCTGCACGTTCATGTCTGTCCACGATGGCGTGCTGGTCACCATCATGGATCTCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | TGTTGTACTCATTGCACTTGGGCACCTGCAGGTAGCTaGGGTGAGAGACGCTCTTCACGTTGGCATGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CCTHCTWAPAGS*GERRSSRWHGG Trigger: CCCTCCATGCCAACGTGAAGAGCGTCTCTCACCTCAGCTACCTGCAGGTGCCCAAGTGCAATGAGTACAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | CGGCCACCACTTGGGGCCTGTACTGGCTGTAGTCTTTaGGGATGGGCAGGAAGTCATCTATCTGTGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RPPLGACTGCSL*GWAGSHLSVTG Trigger: TCCTGTCACAGATAGATGACTTCCTGCCCATCCTCAAAGACTACAGCCAGTACAGGCCCCAAGTGGTGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | AGAACCTCCAGCACCACGATCCAGTTCCACTGGAAGTaGACCATCAGTTGCACCATGGCCTCGATGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RTSSTTIQFHWK*TISCTMASMWW Trigger: CCACCACATCGAGGCCATGGTGCAACTGATGGTTCACTTCCAGTGGAACTGGATCGTGGTGCTGGAGGTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166773.2 |
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| CDS GCA 72 bp | GAGTTCCCTACCAGCATGACTGGCTTAGGCAGAGCATaGAGCAGGAGAAACAGCAAATGGAGTGTCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: EFPTSMTGLGRA*SRRNSKWSVLA Trigger: GGCGAGGACACTCCATTTGCTGTTTCTCCTGCTGCATGCTCTGCCTAAGCCAGTCATGCTGGTAGGGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS GCA 72 bp | TGGGTTCTGGTACAGGCAGAACCTCCTGGAAGGCAATaGAGATATCGCCAGTGTTGGTCAGACGCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: WVLVQAEPPGRQ*RYRQCWSDAGS Trigger: TGAGCCAGCGTCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS CCA 72 bp | ACGGCCTGGTTGGGTTCTGGTACAGGCAGAACCTCCTaGAAGGCAATGCAGATATCGCCAGTGTTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TAWLGSGTGRTS*KAMQISPVLVR Trigger: TCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCTGCCTGTACCAGAACCCAACCAGGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS CCA 72 bp | AGCATCGGCATGTCCCCTTGTTCGTCGAAGAAGAGCTaGTTGCCCAGGAGCGTGAAGTTGACATGCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: SIGMSPCSSKKS*LPRSVKLTCQI Trigger: GATCTGGCATGTCAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGAACAAGGGGACATGCCGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CAA 72 bp | AGAACCTCCTGGAAGGCAATGCAGATATCGCCAGTGTaGGTCAGACGCTGGCTCAGCAGGTGGCTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RTSWKAMQISPV*VRRWLSRWLFS Trigger: AGAGAACAGCCACCTGCTGAGCCAGCGTCTGACCAACACTGGCGATATCTGCATTGCCTTCCAGGAGGTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030510.14 |
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| CDS CAA 72 bp | TCGTCGAAGAAGAGCTGGTTGCCCAGGAGCGTGAAGTaGACATGCCAGATCTCCCTGAGTAGCTGCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: SSKKSWLPRSVK*TCQISLSSCHG Trigger: TCCATGGCAGCTACTCAGGGAGATCTGGCATGTCAACTTCACGCTCCTGGGCAACCAGCTCTTCTTCGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CAA 72 bp | TTGGGGCCAAAGTACCCCAAGCCGATGGCCAGAAAGTaGAGCACAGTGACCAGGAGATCCATGATGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LGPKYPKPMARK*STVTRRSMMVT Trigger: GGTCACCATCATGGATCTCCTGGTCACTGTGCTCAACTTTCTGGCCATCGGCTTGGGGTACTTTGGCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CCA 72 bp | AGCCAGGTGAAAGTCGGAGTTCCCTACCAGCATGACTaGCTTAGGCAGAGCATGCAGCAGGAGAAACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SQVKVGVPYQHD*LRQSMQQEKQQ Trigger: TTGCTGTTTCTCCTGCTGCATGCTCTGCCTAAGCCAGTCATGCTGGTAGGGAACTCCGACTTTCACCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CCA 72 bp | TCGCAGCTTGTCGGTGATGGCGCTATATGTGACCTGTaGCACGAGGAAGTAGGAGAGAATGTTGGACACGGT | + |
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Preference number: 6 (lower is better) Translates to: SQLVGDGAICDL*HEEVGENVGHG Trigger: ACCGTGTCCAACATTCTCTCCTACTTCCTCGTGCCACAGGTCACATATAGCGCCATCACCGACAAGCTGCGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CCA 72 bp | TCTGTGACAGGAAGTAGAGCCCAGGCTGGATATTGTTaGAGAGGTAGCAGACATCCACCATCTCGTAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: SVTGSRAQAGYC*RGSRHPPSRSR Trigger: TCGGCTACGAGATGGTGGATGTCTGCTACCTCTCCAACAATATCCAGCCTGGGCTCTACTTCCTGTCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS CCA 72 bp | TGTTGCGCTCCGGGTAGAAAAGGATCATGTAACACTTaGGGCCAAAGTACCCCAAGCCGATGGCCAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CCAPGRKGSCNT*GQSTPSRWPES Trigger: ACTTTCTGGCCATCGGCTTGGGGTACTTTGGCCCCAAGTGTTACATGATCCTTTTCTACCCGGAGCGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | GTAGTCTTTGAGGATGGGCAGGAAGTCATCTATCTGTaGCAGGAAGTAGAGCCCAGGCTGGATATTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VVFEDGQEVIYL*QEVEPRLDIVG Trigger: TCCAACAATATCCAGCCTGGGCTCTACTTCCTGTCACAGATAGATGACTTCCTGCCCATCCTCAAAGACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | AGCTCTTCCTCATCGTGTAGCCCTGAATCATGCTATTaGAATAAGCTGAAGTGTTGCGCTCCGGGTAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSCSPESCY*NKLKCCAPGRK Trigger: TTTTCTACCCGGAGCGCAACACTTCAGCTTATTTCAATAGCATGATTCAGGGCTACACGATGAGGAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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| CDS TCA 72 bp | CATCGTGTAGCCCTGAATCATGCTATTGAAATAAGCTaGAGTGTTGCGCTCCGGGTAGAAAAGGATCATGTA | + |
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Preference number: 6 (lower is better) Translates to: HRVALNHAIEIS*SVALRVEKDHV Trigger: TACATGATCCTTTTCTACCCGGAGCGCAACACTTCAGCTTATTTCAATAGCATGATTCAGGGCTACACGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030510.14 ENSMUST00000166773.2 |
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