RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAS1R1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028950

Ensembl transcript IDs: ENSMUST00000030792.2

Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTATTGCACTGGATCCTTCTGTGTGCTTATACATCGCAAGCCGTaGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGAC +
Preference number: 1 (lower is better)
Translates to: LYCTGSFCVLIHRKP*LSSPRHLKLSAPLD
Trigger: GTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATCCAGTGCAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
3UTR-3UTR GCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCTCAGCCCATCTCATCTaGCCATTCTCAACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLSAHLI*PFSTAP
Trigger: TGGGGCTGTTGAGAATGGGCAGATGAGATGGGCTGA...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
3UTR TCA 72 bp GATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTaGGCTCTCCCAGACACCTCAAGCTCTCCGCCCCAC +
Preference number: 3 (lower is better)
Translates to: DPSVCLYIASRG*ALPDTSSSPPH
Trigger: GTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
3UTR CCA 72 bp ACTGGATCCTTCTGTGTGCTTATACATCGCAAGCCGTaGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCC +
Preference number: 3 (lower is better)
Translates to: TGSFCVLIHRKP*LSSPRHLKLSA
Trigger: GGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCCGGCCAGCTGCAGGCTaGGCAGCAGGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AELSQTPQALRPTRPATFRPAAG*AAGELP
Trigger: GGGCAGCTCACCTGCTGCTCAGCCTGCAGCTGGCCG...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCATGCGCTGCATCCTTaGGTCACCCGCCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RKPWLSSPRHLKLSAPLDHALHP*VTRLGG
Trigger: TCCGCCCAGGCGGGTGACCCAAGGATGCAGCGCATG...GTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCACCGTCCCAATGCCCTaGATCCCGGGCACATTGGTG +
Preference number: 4 (lower is better)
Translates to: AELSQTPQALRPTRPATFTVPMP*IPGTLV
Trigger: CACCAATGTGCCCGGGATCCAGGGCATTGGGACGGT...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAGCGGTAGACTGGGCCTCTaGCACAGGTCCCAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ELSQTPQALRPTRPATFSGRLGL*HRSQRY
Trigger: GTACCTCTGGGACCTGTGCCAGAGGCCCAGTCTACC...GCTGAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp AAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGAGTCCCCAGGGAGGCTaGAACCTGGAGAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: KPWLSSPRHLKLSAPLDPSPQGG*NLERIL
Trigger: CAGAATCCTCTCCAGGTTTCAGCCTCCCTGGGGACT...CGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTAGAGAAAAGAGGGGCTaGCGCAGCAAGCACGCGGGC +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTREKRG*RSKHAG
Trigger: GCCCGCGTGCTTGCTGCGTCAGCCCCTCTTTTCTCT...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp AAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCGCGGGTAGGTAGCTaGCCTGGTAAATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: KPWLSSPRHLKLSAPLDPPRVGS*PGKCWT
Trigger: TGTCCAGCATTTACCAGGGCAGCTACCTACCCGCGG...CGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCAACTTATCGCTGGGGATaGTGCGCAAGAAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: PWLSSPRHLKLSAPLDPPTYRWG*CARRTG
Trigger: TCCCGTCCTTCTTGCGCACCATCCCCAGCGATAAGT...TGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCTTGTCTCTGCTGGATaGCCACCCCCAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTLVSAG*PPPAPS
Trigger: GGACGGTGCTGGGGGTGGCCATCCAGCAGAGACAAG...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTGTACATCCCAGGAGCTaGTGGAGGCCGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTVHPRS*WRPWAT
Trigger: TGTGGCCCACGGCCTCCACCAGCTCCTGGGATGTAC...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp CAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCACTGACACAGGCACCTaGTTGTTCTTCCCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QAVAELSQTPQALRPTRPTDTGT*LFFPCH
Trigger: GTGGCACGGGAAGAACAATCAGGTGCCTGTGTCAGT...GGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCGGTCTGTGTCTCACCTaGAGACAGTCAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: AELSQTPQALRPTRPATFGLCLT*RQSAWR
Trigger: CCTCCATGCTGACTGTCTGCAGGTGAGACACAGACC...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp CGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACATGACCAACCTGTGGTaGCCTTCGAGACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKPWLSSPRHLKLSAPLDMTNLW*PSRQSL
Trigger: CAGGGACTGTCTCGAAGGGCACCACAGGTTGGTCAT...GTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp GAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAGCGAGGAGGATGTTGTGTaGGAAAGCCACCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ELSQTPQALRPTRPATFSEEDVV*ESHQEA
Trigger: GGCTTCCTGGTGGCTTTCGCACACAACATCCTCCTC...GCTGAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCCCTCTGGGCAAGTTCTaGGAGCACCCATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: HRKPWLSSPRHLKLSAPLPLGKF*EHPSLP
Trigger: AGGCAGTGATGGGTGCTCCCAGAACTTGCCCAGAGG...GAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCAGCTGGTGGAGGCCGTaGGCCACAGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPSWWRP*ATAYTA
Trigger: GGCTGTGTATGCTGTGGCCCACGGCCTCCACCAGCT...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCTGCCAGGGGTAGACTaGGCCTCTGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LIHRKPWLSSPRHLKLSALPGVD*ASGTGP
Trigger: GGGACCTGTGCCAGAGGCCCAGTCTACCCCTGGCAG...GGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAGCACCACCTTGGAGGAGTaGTTGCGAAGATCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ELSQTPQALRPTRPATFSTTLEE*LRRSLC
Trigger: GCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGT...GCTGAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCTCGAAGCAGCAGTGGTaGGAACCCATGACCAACCTG +
Preference number: 4 (lower is better)
Translates to: HRKPWLSSPRHLKLSAPLSKQQW*EPMTNL
Trigger: CAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGA...GAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCAGATGGGGGAAGCGCTaGTACTCCCTGGTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LIHRKPWLSSPRHLKLSARWGKR*YSLVGR
Trigger: ACGGCCCACCAGGGAGTACCAGCGCTTCCCCCATCT...GGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACTCAAGAATCACCAGATaGGGGAAGCGCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: RKPWLSSPRHLKLSAPLDSRITR*GKRWYS
Trigger: GGAGTACCAGCGCTTCCCCCATCTGGTGATTCTTGA...GTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCCATGTCGTGAAAGCGTaGCACTCCCTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPHVVKA*HSLHSW
Trigger: CCAGCTGTGCAGGGAGTGTCACGCTTTCACGACATG...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp CAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCATGAACTGGAGACAGTaGGGCAGAACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: QAVAELSQTPQALRPTRPMNWRQ*GRTNDL
Trigger: GAGGTCATTGGTTCTGCCTCACTGTCTCCAGTTCAT...GGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTAGGCGATCCACACTTTaGCAGTCAGGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTRRSTL*QSGWPA
Trigger: TGCTGGCCAACCTGACTGGCAAAGTGTGGATCGCCT...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCCTGGTACTTATCGCTaGGGATGGTGCGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTPGTYR*GWCARR
Trigger: CCTTCTTGCGCACCATCCCCAGCGATAAGTACCAGG...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAGCGCTGGTACTCCCTaGTGGGCCGTGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLSAGTP*WAVGST
Trigger: TGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCT...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp GGATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCAGCCTACCCCCAGCTaGCCTCACAACAGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GSFCVLIHRKPWLSSPRHQPTPS*PHNRRV
Trigger: CACACGCCTGTTGTGAGGTCAGCTGGGGGTAGGCTG...GTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp CGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACAGTGTTCTGTGTTGTTaGGTTCTGGACGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RKPWLSSPRHLKLSAPLDSVLCC*VLDGRE
Trigger: TTCTCTGCCGTCCAGAACTCAACAACACAGAACACT...GTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCCCAGCACCGTCCCAATaGCCTGGATCCCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLPAPSQ*PGSRAH
Trigger: ATGTGCCCGGGATCCAGGGCATTGGGACGGTGCTGG...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTGAGGATTCTGTCCTTTaGCAGCTGAAAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTEDSVL*QLKAQQ
Trigger: CTGCTGGGCTTTCAGCTGCCAAAGGACAGAATCCTC...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCGCAGTGGTGACAGCGTaGTCAGTGTTATCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPAVVTA*SVLSGP
Trigger: TGGGCCTGATAACACTGACCACGCTGTCACCACTGC...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCGGGACTTGTCTCTGCTaGATGGCCACCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALGTCLC*MATPST
Trigger: GGTGCTGGGGGTGGCCATCCAGCAGAGACAAGTCCC...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GGATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACAGCACGCGGGCACCGTaGGCTTCCCGAAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSFCVLIHRKPWLSSPRHSTRAP*ASRRSC
Trigger: ACAGCTTCTTCGGGAAGCCCACGGTGCCCGCGTGCT...GTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCGCTGGTACTCCCTGGTaGGCCGTGGGGTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLAGTPW*AVGSTL
Trigger: CAATGTGGACCCCACGGCCCACCAGGGAGTACCAGC...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCTCGTGTAGTCCTGGATaGAGGCCTGAAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HRKPWLSSPRHLKLSAPLSCSPG*RPESVL
Trigger: CAGAACACTTTCAGGCCTCCATCCAGGACTACACGA...GAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCGCAGCAGCCGCACTATaGCTTCCACCTGGTACTTAT +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPAAAAL*LPPGTY
Trigger: ATAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGC...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCTGCAGACAGTCAGCATaGAGGGAGAACAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VLIHRKPWLSSPRHLKLSCRQSA*RENRPA
Trigger: GGCAGGCCTGTTCTCCCTCCATGCTGACTGTCTGCA...GGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp CAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCTGGGAAGCAGAGCTGTaGAGTTGTTTATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QAVAELSQTPQALRPTRPWEAEL*SCLSPQ
Trigger: TTGAGGAGATAAACAACTCCACAGCTCTGCTTCCCA...GGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTGGGTGGCATAGACATTaGAAGACTCTGAGCACACGT +
Preference number: 4 (lower is better)
Translates to: TSQAVAELSQTPQALRPTGWHRH*KTLSTR
Trigger: ACGTGTGCTCAGAGTCTTCCAATGTCTATGCCACCC...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp AAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGAAGATGATGACCAGTTaGAAGGAGCGGATTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KPWLSSPRHLKLSAPLDPKMMTS*KERIVR
Trigger: TCTGACAATCCGCTCCTTCCAACTGGTCATCATCTT...CGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCTGTGTTGTTGAGTTCTaGACGGCAGAGAATCACGTA +
Preference number: 4 (lower is better)
Translates to: AELSQTPQALRPTRPATFCVVEF*TAENHV
Trigger: TACGTGATTCTCTGCCGTCCAGAACTCAACAACACA...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCTGCAGACAAAGGTGCTaGTGGAGAGGAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPCRQRC*WRGGCC
Trigger: ACAACATCCTCCTCTCCATCAGCACCTTTGTCTGCA...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCCCAAGAACTCCACGGTaGGTGAGAAGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLPRTPR*VRSRLS
Trigger: GCTCAGCCTGCTTCTCACGCACCGTGGAGTTCTTGG...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCAAAGAGATGGGTTCATaGCACCCCAAGAACTCCACG +
Preference number: 4 (lower is better)
Translates to: YTSQAVAELSQTPQALRPKEMGS*HPKNST
Trigger: CGTGGAGTTCTTGGGGTGGCATGAACCCATCTCTTT...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCCGTGGGGTCCACATTaGAAGCCACGTGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALPWGPH*KPRETE
Trigger: CTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGG...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCAGCTTCACAGGGCATaGACTCGAAGCAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALQLHRA*TRSSSG
Trigger: ACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTG...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCAGGGAGGCTGAAACCTaGAGAGGATTCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLIHRKPWLSSPRHLKLSREAET*RGFCPL
Trigger: CAAAGGACAGAATCCTCTCCAGGTTTCAGCCTCCCT...GGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCTTCGAGACAGTCCCTaGTACACACTGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALLRDSP*YTLTQA
Trigger: TGCCTGTGTCAGTGTGTACCAGGGACTGTCTCGAAG...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR GCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCCTTGGAGGAGTGGTTaGGAAGATCTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALPWRSG*EDLSAS
Trigger: AGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGG...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp ATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTTTATCTCCTCAACGGTaGACCGCATGGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ILLCAYTSQAVAELSQTPLSPQR*TAWLGR
Trigger: TCTTCCAAGCCATGCGGTTCACCGTTGAGGAGATAA...AGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp GGATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACACATTGCAAGCCACGTaGGACAGAGGAACAAATGGA +
Preference number: 4 (lower is better)
Translates to: GSFCVLIHRKPWLSSPRHTLQAT*DRGTNG
Trigger: TCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGT...GTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp GTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGACAGGAGAGGAAAATaGCAAACCCGAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: VLIHRKPWLSSPRHLKLSDRRGK*QTREKR
Trigger: TCTTTTCTCTCGGGTTTGCCATTTTCCTCTCCTGTC...GGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp TGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCAAATGCTGGACATGGTaGAGAAAGCGATCCAGGATA +
Preference number: 4 (lower is better)
Translates to: CAYTSQAVAELSQTPQALKCWTW*RKRSRI
Trigger: TATCCTGGATCGCTTTCTTCACCATGTCCAGCATTT...GAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR TCA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCTTATTTATGTCTAGATaGACTGGAGACAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLLFMSR*TGDSEA
Trigger: TGCCTCACTGTCTCCAGTTCATCTAGACATAAATAA...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CCA 90 bp ATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTTTCTTCCCGTGCCACTaGATTTTTGTCTTATTTATG +
Preference number: 4 (lower is better)
Translates to: ILLCAYTSQAVAELSQTPFFPCH*IFVLFM
Trigger: CATAAATAAGACAAAAATCCAGTGGCACGGGAAGAA...AGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCTCATGCGCTGCATCCTaGGGTCACCCGCCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: AELSQTPQALRPTRPATFSCAAS*GHPPGR
Trigger: CCGCCCAGGCGGGTGACCCAAGGATGCAGCGCATGA...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 90 bp GCTCCTCCAGCGCCTGTACGCCCAGCTGCCCGTAGTCACCATAGCTaGCAACGAGCGAGATCCAGACCCAGCCGAAGCTCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: APPAPVRPAARSHHS*QRARSRPSRSSAAA
Trigger: GGCTGCTGCAGAGCTTCGGCTGGGTCTGGATCTCGCTCGTTGGCAGCTATGGTGACTACGGGCAGCTGGGCGTACAGGCGCTGGAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp CCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCAATGGAGAGGAGGATGTaGTGTGCGAAAGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: PWLSSPRHLKLSAPLDPPMERRM*CAKATR
Trigger: CCTGGTGGCTTTCGCACACAACATCCTCCTCTCCAT...TGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp ACCCGAGAGAAAAGAGGGGCTGACGCAGCAAGCACGCGGGCACCGTaGGCTTCCCGAAGAAGCTGTAGAGGCTGCAACTCCCAGCTACCA +
Preference number: 5 (lower is better)
Translates to: TREKRGADAASTRAP*ASRRSCRGCNSQLP
Trigger: TGGTAGCTGGGAGTTGCAGCCTCTACAGCTTCTTCGGGAAGCCCACGGTGCCCGCGTGCTTGCTGCGTCAGCCCCTCTTTTCTCTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAAGAAGGACGGGAACTaGCGCTTCCCACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: AELSQTPQALRPTRPATFKKDGN*RFPLRI
Trigger: GATCCTCAGTGGGAAGCGCAAGTTCCCGTCCTTCTT...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 90 bp ATGGGGGAAGCGCTGGTACTCCCTGGTGGGCCGTGGGGTCCACATTaGAAGCCACGTGAGACAGAGGAACAAATGGACCGTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: MGEALVLPGGPWGPH*KPRETEEQMDRGAD
Trigger: GTCAGCTCCACGGTCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp GCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAGAGGATTCTGTCCTTaGGCAGCTGAAAGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: AELSQTPQALRPTRPATFRGFCP*AAESPA
Trigger: TGCTGGGCTTTCAGCTGCCAAAGGACAGAATCCTCT...GAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp CCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCAGAAGATGATGACCAGTaGGAAGGAGCGGATTGTCAG +
Preference number: 5 (lower is better)
Translates to: PWLSSPRHLKLSAPLDPPEDDDQ*EGADCQ
Trigger: CTGACAATCCGCTCCTTCCAACTGGTCATCATCTTC...TGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp CGAGCGAGATCCAGACCCAGCCGAAGCTCTGCAGCAGCCGCACTATaGCTTCCACCTGGTACTTATCGCTGGGGATGGTGCGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: RARSRPSRSSAAAAL*LPPGTYRWGWCARR
Trigger: CCTTCTTGCGCACCATCCCCAGCGATAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGCAGAGCTTCGGCTGGGTCTGGATCTCGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 90 bp GCCGCACCAGGACCCCTCTGGGCAAGTTCTGGGAGCACCCATCACTaGCTGGACATAGGACTCTTCAAACTCCTTCAGGCCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: AAPGPLWASSGSTHH*LDIGLFKLLQARDL
Trigger: CAAGTCCCTGGCCTGAAGGAGTTTGAAGAGTCCTATGTCCAGGCAGTGATGGGTGCTCCCAGAACTTGCCCAGAGGGGTCCTGGTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp GAGTTGACCTCTGTGCACTCAAGAATCACCAGATGGGGGAAGCGCTaGTACTCCCTGGTGGGCCGTGGGGTCCACATTGCAAGCCACGTG +
Preference number: 5 (lower is better)
Translates to: ELTSVHSRITRWGKR*YSLVGRGVHIASHV
Trigger: CACGTGGCTTGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCTTCCCCCATCTGGTGATTCTTGAGTGCACAGAGGTCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp GAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCCACCTTCAGCAGCAGAGCTGTGGAGTaGTTTATCTCCTCAACGGTG +
Preference number: 5 (lower is better)
Translates to: ELSQTPQALRPTRPATFSSRAVE*FISSTV
Trigger: CACCGTTGAGGAGATAAACAACTCCACAGCTCTGCT...GCTGAAGGTGGCGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp CTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCGAGGCGATCCACACTTaGCCAGTCAGGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LIHRKPWLSSPRHLKLSAEAIHT*PVRLAS
Trigger: GCTGGCCAACCTGACTGGCAAAGTGTGGATCGCCTC...GGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp ATGGAGAAGGCTCCAAGCTCGGGCATGTTCCATGTCGTGAAAGCGTaGCACTCCCTGCACAGCTGGTTAGTGCCGCACCAGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: MEKAPSSGMFHVVKA*HSLHSWLVPHQDPS
Trigger: AGAGGGGTCCTGGTGCGGCACTAACCAGCTGTGCAGGGAGTGTCACGCTTTCACGACATGGAACATGCCCGAGCTTGGAGCCTTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp CAGCTTCACAGGGCATGCACTCGAAGCAGCAGTGGTGGGAACCCATaGCCAACCTGTGGTGCCCTTCGAGACAGTCCCTGGTACACACTG +
Preference number: 5 (lower is better)
Translates to: QLHRACTRSSSGGNP*PTCGALRDSPWYTL
Trigger: CAGTGTGTACCAGGGACTGTCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp AGGGGCATCAGAAAAGGGCTCAGCAGGGCAGCAGTGGTGACAGCGTaGTCAGTGTTATCAGGCCCAATGAGTGCCACCACCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RGIRKGLSRAAVVTA*SVLSGPMSATTLEE
Trigger: CTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCACGCTGTCACCACTGCTGCCCTGCTGAGCCCTTTTCTGATGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp CAGACCCAGCCGAAGCTCTGCAGCAGCCGCACTATGACTTCCACCTaGTACTTATCGCTGGGGATGGTGCGCAAGAAGGACGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: QTQPKLCSSRTMTST*YLSLGMVRKKDGNL
Trigger: CAAGTTCCCGTCCTTCTTGCGCACCATCCCCAGCGATAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGCAGAGCTTCGGCTGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp TATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCCCTAGAGGGTCCCCCTaGTCATCGAATGCTACAGTC +
Preference number: 5 (lower is better)
Translates to: YTSQAVAELSQTPQALRPPRGSP*SSNATV
Trigger: GACTGTAGCATTCGATGACAAGGGGGACCCTCTAGG...GGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp AGAAGCTGTAGAGGCTGCAACTCCCAGCTACCAAGGAACCCAGCATaGGGAAGCACAGCCTACCCCCAGCTGACCTCACAACAGGCGTGT +
Preference number: 5 (lower is better)
Translates to: RSCRGCNSQLPRNPA*GSTAYPQLTSQQAC
Trigger: ACACGCCTGTTGTGAGGTCAGCTGGGGGTAGGCTGTGCTTCCTCATGCTGGGTTCCTTGGTAGCTGGGAGTTGCAGCCTCTACAGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp AGAAATGTCCCAGCTTCACAGGGCATGCACTCGAAGCAGCAGTGGTaGGAACCCATGACCAACCTGTGGTGCCCTTCGAGACAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: RNVPASQGMHSKQQW*EPMTNLWCPSRQSL
Trigger: CAGGGACTGTCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTGGGACATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp AAGAATCACCAGATGGGGGAAGCGCTGGTACTCCCTGGTGGGCCGTaGGGTCCACATTGCAAGCCACGTGAGACAGAGGAACAAATGGAC +
Preference number: 5 (lower is better)
Translates to: KNHQMGEALVLPGGP*GPHCKPRETEEQMD
Trigger: GTCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCTTCCCCCATCTGGTGATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp CTCCCCTCAGGGGCCCATTCTTCTGTTCCACAAGGCTGGCAGGTGTaGAGCTCACTCGTGTTGAGAAATGTCCCAGCTTCACAGGGCATG +
Preference number: 5 (lower is better)
Translates to: LPSGAHSSVPQGWQV*SSLVLRNVPASQGM
Trigger: CATGCCCTGTGAAGCTGGGACATTTCTCAACACGAGTGAGCTTCACACCTGCCAGCCTTGTGGAACAGAAGAATGGGCCCCTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 90 bp GGCAGCAGTGGTGACAGCGTGGTCAGTGTTATCAGGCCCAATGAGTaGCACCACCTTGGAGGAGTGGTTGCGAAGATCTCTCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: GSSGDSVVSVIRPNE*HHLGGVVAKISLHL
Trigger: GAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCACGCTGTCACCACTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp GAAATTCACCTTGTAGATCTGCTGAAGAAGCTGCCAGGGGTAGACTaGGCCTCTGGCACAGGTCCCAGAGGTACATCCCAGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: EIHLVDLLKKLPGVD*ASGTGPRGTSQELV
Trigger: CACCAGCTCCTGGGATGTACCTCTGGGACCTGTGCCAGAGGCCCAGTCTACCCCTGGCAGCTTCTTCAGCAGATCTACAAGGTGAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp TTGAGAAATGTCCCAGCTTCACAGGGCATGCACTCGAAGCAGCAGTaGTGGGAACCCATGACCAACCTGTGGTGCCCTTCGAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: LRNVPASQGMHSKQQ*WEPMTNLWCPSRQS
Trigger: GGACTGTCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTGGGACATTTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp AGAGGAGGATGTTGTGTGCGAAAGCCACCAGGAAGCCCACAGAGTTaGCCTCTGTGCACTCAAGAATCACCAGATGGGGGAAGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: RGGCCVRKPPGSPQS*PLCTQESPDGGSAG
Trigger: ACCAGCGCTTCCCCCATCTGGTGATTCTTGAGTGCACAGAGGTCAACTCTGTGGGCTTCCTGGTGGCTTTCGCACACAACATCCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp TGGTCAGTGTTATCAGGCCCAATGAGTGCCACCACCTTGGAGGAGTaGTTGCGAAGATCTCTCTGCATCTCTAGGTGGCCTGTCCCTTGC +
Preference number: 5 (lower is better)
Translates to: WSVLSGPMSATTLEE*LRRSLCISRWPVPC
Trigger: GCAAGGGACAGGCCACCTAGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp TCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCTGGATCCCGGGCACATaGGTGATGTACGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SFCVLIHRKPWLSSPRHLWIPGT*VMYVEM
Trigger: CATCTCCACGTACATCACCAATGTGCCCGGGATCCA...GAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp CTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCGTTGGAAGGAGCGGATaGTCAGACAGGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LIHRKPWLSSPRHLKLSAVGRSG*SDRRGK
Trigger: TTTTCCTCTCCTGTCTGACAATCCGCTCCTTCCAAC...GGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 90 bp TTGCTGGGCGAGCACCCTCAGGGTGGCATAGACATTGGAAGACTCTaGGCACACGTCATACAGTTCATACCCCAGGGTGATGTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LLGEHPQGGIDIGRL*AHVIQFIPQGDVGK
Trigger: CTTCCCAACATCACCCTGGGGTATGAACTGTATGACGTGTGCTCAGAGTCTTCCAATGTCTATGCCACCCTGAGGGTGCTCGCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp GGCCGTGGGGTCCACATTGCAAGCCACGTGAGACAGAGGAACAAATaGACCGTGGAGCTGACAATGACGAATATTCCGGCACCATGGTTT +
Preference number: 5 (lower is better)
Translates to: GRGVHIASHVRQRNK*TVELTMTNIPAPWF
Trigger: AAACCATGGTGCCGGAATATTCGTCATTGTCAGCTCCACGGTCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp AAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTCGACCCGCGTGCCACTGGATTTTaGTCTTATTTATGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: KPWLSSPRHLKLSAPLDPRATGF*SYLCLD
Trigger: ATCTAGACATAAATAAGACAAAAATCCAGTGGCACG...CGGGTCGAGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp ACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAAGCTCTCCGCCCCACTACCTTGGTAGAAAACTaGAAGATGATGACCAGTTGG +
Preference number: 5 (lower is better)
Translates to: TSQAVAELSQTPQALRPTTLVEN*KMMTSW
Trigger: CCAACTGGTCATCATCTTCAAGTTTTCTACCAAGGT...AGTGGGGCGGAGAGCTTGAGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS-3UTR CAA 90 bp ATCCTTCTGTGTGCTTATACATCGCAAGCCGTGGCTGAGCTCTCCCAGACACCTCAGACCTGTCACAACTaGTCACCAGAGGTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ILLCAYTSQAVAELSQTPQTCHN*SPEVCV
Trigger: GACACAGACCTCTGGTGACAAGTTGTGACAGGTCTG...AGGTGTCTGGGAGAGCTCAGCCACGGCTTGCGATGTATAAGCACACAGAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 90 bp GTAGTCCTGGATGGAGGCCTGAAAGTGTTCTGTGTTGTTGAGTTCTaGACGGCAGAGAATCACGTAGCATTTAGGGAGGAAATAGCCGCT +
Preference number: 5 (lower is better)
Translates to: VVLDGGLKVFCVVEF*TAENHVAFREEIAA
Trigger: AGCGGCTATTTCCTCCCTAAATGCTACGTGATTCTCTGCCGTCCAGAACTCAACAACACAGAACACTTTCAGGCCTCCATCCAGGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp GGGTCACCCGCCTGGGCGGAGAGAGGCACCACGTCCTaGAAGGCGACGCAGATGCCCCGTGGAGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GSPAWAERGTTS*KATQMPRGVAS
Trigger: GCTGGCCACTCCACGGGGCATCTGCGTCGCCTTCAAGGACGTGGTGCCTCTCTCCGCCCAGGCGGGTGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp AGGCACCACGTCCTTGAAGGCGACGCAGATGCCCCGTaGAGTGGCCAGCTCCTCCAGCGCCTGTACGCCCAG +
Preference number: 6 (lower is better)
Translates to: RHHVLEGDADAP*SGQLLQRLYAQ
Trigger: CTGGGCGTACAGGCGCTGGAGGAGCTGGCCACTCCACGGGGCATCTGCGTCGCCTTCAAGGACGTGGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp ATGGCCACCCCCAGCACCGTCCCAATGCCCTGGATCCCGGGCACATaGGTGATGTACGTGGAGATGGCCCAGTCTTCGGAGGCGATCCAC +
Preference number: 6 (lower is better)
Translates to: MATPSTVPMPWIPGT*VMYVEMAQSSEAIH
Trigger: GTGGATCGCCTCCGAAGACTGGGCCATCTCCACGTACATCACCAATGTGCCCGGGATCCAGGGCATTGGGACGGTGCTGGGGGTGGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp GCACCGTCCCAATGCCCTGGATCCCGGGCACATTGGTaGTGTACGTGGAGATGGCCCAGTCTTCGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: APSQCPGSRAHW*CTWRWPSLRRR
Trigger: TCGCCTCCGAAGACTGGGCCATCTCCACGTACATCACCAATGTGCCCGGGATCCAGGGCATTGGGACGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp TGCTGGATGGCCACCCCCAGCACCGTCCCAATGCCCTaGATCCCGGGCACATTGGTGATGTACGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: CWMATPSTVPMP*IPGTLVMYVEM
Trigger: CATCTCCACGTACATCACCAATGTGCCCGGGATCCAGGGCATTGGGACGGTGCTGGGGGTGGCCATCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp AAAAGAGGGGCTGACGCAGCAAGCACGCGGGCACCGTaGGCTTCCCGAAGAAGCTGTAGAGGCTGCAACTCC +
Preference number: 6 (lower is better)
Translates to: KRGADAASTRAP*ASRRSCRGCNS
Trigger: GGAGTTGCAGCCTCTACAGCTTCTTCGGGAAGCCCACGGTGCCCGCGTGCTTGCTGCGTCAGCCCCTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp CAGATGGGGGAAGCGCTGGTACTCCCTGGTGGGCCGTaGGGTCCACATTGCAAGCCACGTGAGACAGAGGAA +
Preference number: 6 (lower is better)
Translates to: QMGEALVLPGGP*GPHCKPRETEE
Trigger: TTCCTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCTTCCCCCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp CCCAGCACCGTCCCAATGCCCTGGATCCCGGGCACATaGGTGATGTACGTGGAGATGGCCCAGTCTTCGGAG +
Preference number: 6 (lower is better)
Translates to: PSTVPMPWIPGT*VMYVEMAQSSE
Trigger: CTCCGAAGACTGGGCCATCTCCACGTACATCACCAATGTGCCCGGGATCCAGGGCATTGGGACGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp AGGGCATGCACTCGAAGCAGCAGTGGTGGGAACCCATaGCCAACCTGTGGTGCCCTTCGAGACAGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: RACTRSSSGGNP*PTCGALRDSPW
Trigger: CCAGGGACTGTCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp CACAGCCTACCCCCAGCTGACCTCACAACAGGCGTGTaGAGACGCCAGGCAAACAGGCCAGCAGTCCCAATC +
Preference number: 6 (lower is better)
Translates to: HSLPPADLTTGV*RRQANRPAVPI
Trigger: GATTGGGACTGCTGGCCTGTTTGCCTGGCGTCTTCACACGCCTGTTGTGAGGTCAGCTGGGGGTAGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp GCGCTGGTACTCCCTGGTGGGCCGTGGGGTCCACATTaGAAGCCACGTGAGACAGAGGAACAAATGGACCGT +
Preference number: 6 (lower is better)
Translates to: ALVLPGGPWGPH*KPRETEEQMDR
Trigger: ACGGTCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp GTCCCAGCTTCACAGGGCATGCACTCGAAGCAGCAGTaGTGGGAACCCATGACCAACCTGTGGTGCCCTTCG +
Preference number: 6 (lower is better)
Translates to: VPASQGMHSKQQ*WEPMTNLWCPS
Trigger: CGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp TCCAGACCCAGCCGAAGCTCTGCAGCAGCCGCACTATaGCTTCCACCTGGTACTTATCGCTGGGGATGGTGC +
Preference number: 6 (lower is better)
Translates to: SRPSRSSAAAAL*LPPGTYRWGWC
Trigger: GCACCATCCCCAGCGATAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGCAGAGCTTCGGCTGGGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp GGAACCCAGCATGAGGAAGCACAGCCTACCCCCAGCTaGCCTCACAACAGGCGTGTGAAGACGCCAGGCAAA +
Preference number: 6 (lower is better)
Translates to: GTQHEEAQPTPS*PHNRRVKTPGK
Trigger: TTTGCCTGGCGTCTTCACACGCCTGTTGTGAGGTCAGCTGGGGGTAGGCTGTGCTTCCTCATGCTGGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp GGTGGCCTGTCCCTTGCTGGGCGAGCACCCTCAGGGTaGCATAGACATTGGAAGACTCTGAGCACACGTCAT +
Preference number: 6 (lower is better)
Translates to: GGLSLAGRAPSG*HRHWKTLSTRH
Trigger: ATGACGTGTGCTCAGAGTCTTCCAATGTCTATGCCACCCTGAGGGTGCTCGCCCAGCAAGGGACAGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp CCAGCTTCACAGGGCATGCACTCGAAGCAGCAGTGGTaGGAACCCATGACCAACCTGTGGTGCCCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: PASQGMHSKQQW*EPMTNLWCPSR
Trigger: TCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTTCGAGTGCATGCCCTGTGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp TCTGTGCACTCAAGAATCACCAGATGGGGGAAGCGCTaGTACTCCCTGGTGGGCCGTGGGGTCCACATTGCA +
Preference number: 6 (lower is better)
Translates to: SVHSRITRWGKR*YSLVGRGVHIA
Trigger: TGCAATGTGGACCCCACGGCCCACCAGGGAGTACCAGCGCTTCCCCCATCTGGTGATTCTTGAGTGCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp TTATCGCTGGGGATGGTGCGCAAGAAGGACGGGAACTaGCGCTTCCCACTGAGGATCACGCTGCTCGCCTCA +
Preference number: 6 (lower is better)
Translates to: LSLGMVRKKDGN*RFPLRITLLAS
Trigger: TGAGGCGAGCAGCGTGATCCTCAGTGGGAAGCGCAAGTTCCCGTCCTTCTTGCGCACCATCCCCAGCGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp GAGGAAGTCCCCAGGGAGGCTGAAACCTGGAGAGGATTCTGTCCTTaGGCAGCTGAAAGCCCAGCAGTAAGCAACGGCCAGCTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: EEVPREAETWRGFCP*AAESPAVSNGQLQA
Trigger: AGCCTGCAGCTGGCCGTTGCTTACTGCTGGGCTTTCAGCTGCCAAAGGACAGAATCCTCTCCAGGTTTCAGCCTCCCTGGGGACTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp AGAGGCTGCAACTCCCAGCTACCAAGGAACCCAGCATaGGGAAGCACAGCCTACCCCCAGCTGACCTCACAA +
Preference number: 6 (lower is better)
Translates to: RGCNSQLPRNPA*GSTAYPQLTSQ
Trigger: TTGTGAGGTCAGCTGGGGGTAGGCTGTGCTTCCTCATGCTGGGTTCCTTGGTAGCTGGGAGTTGCAGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp CTGCCAACGAGCGAGATCCAGACCCAGCCGAAGCTCTaGAGCAGCCGCACTATGACTTCCACCTGGTACTTA +
Preference number: 6 (lower is better)
Translates to: LPTSEIQTQPKL*SSRTMTSTWYL
Trigger: TAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGCAGAGCTTCGGCTGGGTCTGGATCTCGCTCGTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp GGACCCCTCTGGGCAAGTTCTGGGAGCACCCATCACTaGCTGGACATAGGACTCTTCAAACTCCTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: GPLWASSGSTHH*LDIGLFKLLQA
Trigger: GGCCTGAAGGAGTTTGAAGAGTCCTATGTCCAGGCAGTGATGGGTGCTCCCAGAACTTGCCCAGAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp AGAAAAGGGCTCAGCAGGGCAGCAGTGGTGACAGCGTaGTCAGTGTTATCAGGCCCAATGAGTGCCACCACC +
Preference number: 6 (lower is better)
Translates to: RKGLSRAAVVTA*SVLSGPMSATT
Trigger: GGTGGTGGCACTCATTGGGCCTGATAACACTGACCACGCTGTCACCACTGCTGCCCTGCTGAGCCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp CCGAAGCTCTGCAGCAGCCGCACTATGACTTCCACCTaGTACTTATCGCTGGGGATGGTGCGCAAGAAGGAC +
Preference number: 6 (lower is better)
Translates to: PKLCSSRTMTST*YLSLGMVRKKD
Trigger: GTCCTTCTTGCGCACCATCCCCAGCGATAAGTACCAGGTGGAAGTCATAGTGCGGCTGCTGCAGAGCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp CCCAGGGAGGCTGAAACCTGGAGAGGATTCTGTCCTTaGGCAGCTGAAAGCCCAGCAGTAAGCAACGGCCAG +
Preference number: 6 (lower is better)
Translates to: PREAETWRGFCP*AAESPAVSNGQ
Trigger: CTGGCCGTTGCTTACTGCTGGGCTTTCAGCTGCCAAAGGACAGAATCCTCTCCAGGTTTCAGCCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp GAGAGGAGGATGTTGTGTGCGAAAGCCACCAGGAAGCCCACAGAGTaGACCTCTGTGCACTCAAGAATCACCAGATGGGGGAAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: ERRMLCAKATRKPTE*TSVHSRITRWGKRW
Trigger: CCAGCGCTTCCCCCATCTGGTGATTCTTGAGTGCACAGAGGTCAACTCTGTGGGCTTCCTGGTGGCTTTCGCACACAACATCCTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp CTGTCACAACTTGTCACCAGAGGTCTGTGTCTCACCTaGAGACAGTCAGCATGGAGGGAGAACAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LSQLVTRGLCLT*RQSAWRENRPA
Trigger: GGCAGGCCTGTTCTCCCTCCATGCTGACTGTCTGCAGGTGAGACACAGACCTCTGGTGACAAGTTGTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp AAGCAGCAGTGGTGGGAACCCATGACCAACCTGTGGTaGCCTTCGAGACAGTCCCTGGTACACACTGACACA +
Preference number: 6 (lower is better)
Translates to: KQQWWEPMTNLW*PSRQSLVHTDT
Trigger: TGTGTCAGTGTGTACCAGGGACTGTCTCGAAGGGCACCACAGGTTGGTCATGGGTTCCCACCACTGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp TCAGGCCCAATGAGTGCCACCACCTTGGAGGAGTGGTaGCGAAGATCTCTCTGCATCTCTAGGTGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SGPMSATTLEEW*RRSLCISRWPV
Trigger: GACAGGCCACCTAGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp TCAGTGTTATCAGGCCCAATGAGTGCCACCACCTTGGAGGAGTGGTaGCGAAGATCTCTCTGCATCTCTAGGTGGCCTGTCCCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SVLSGPMSATTLEEW*RRSLCISRWPVPCW
Trigger: CCAGCAAGGGACAGGCCACCTAGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp GTGACAGCGTGGTCAGTGTTATCAGGCCCAATGAGTGCCACCACCTaGGAGGAGTGGTTGCGAAGATCTCTCTGCATCTCTAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: VTAWSVLSGPMSATT*EEWLRRSLCISRWP
Trigger: AGGCCACCTAGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCACGCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp GGTGACAGCGTGGTCAGTGTTATCAGGCCCAATGAGTaGCACCACCTTGGAGGAGTGGTTGCGAAGATCTCT +
Preference number: 6 (lower is better)
Translates to: GDSVVSVIRPNE*HHLGGVVAKIS
Trigger: AGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCACGCTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS GCA 72 bp GCAGACAAAGGTGCTGATGGAGAGGAGGATGTTGTGTaGGAAAGCCACCAGGAAGCCCACAGAGTTGACCTC +
Preference number: 6 (lower is better)
Translates to: ADKGADGEEDVV*ESHQEAHRVDL
Trigger: GAGGTCAACTCTGTGGGCTTCCTGGTGGCTTTCGCACACAACATCCTCCTCTCCATCAGCACCTTTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp ACCGCATGGCTTGGAAGAGGTGATAGCCATGGCCGTTaGAGCTGTCAGACCTGTCACAACTTGTCACCAGAG +
Preference number: 6 (lower is better)
Translates to: TAWLGRGDSHGR*SCQTCHNLSPE
Trigger: CTCTGGTGACAAGTTGTGACAGGTCTGACAGCTTCAACGGCCATGGCTATCACCTCTTCCAAGCCATGCGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp GGGGCCCATTCTTCTGTTCCACAAGGCTGGCAGGTGTaGAGCTCACTCGTGTTGAGAAATGTCCCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: GAHSSVPQGWQV*SSLVLRNVPAS
Trigger: TGAAGCTGGGACATTTCTCAACACGAGTGAGCTTCACACCTGCCAGCCTTGTGGAACAGAAGAATGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp CGGGTAGGTAGCTGCCCTGGTAAATGCTGGACATGGTaGAGAAAGCGATCCAGGATACGAAGTGGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: RVGSCPGKCWTW*RKRSRIRSGGA
Trigger: TGCTCCTCCACTTCGTATCCTGGATCGCTTTCTTCACCATGTCCAGCATTTACCAGGGCAGCTACCTACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp TTATCAGGCCCAATGAGTGCCACCACCTTGGAGGAGTaGTTGCGAAGATCTCTCTGCATCTCTAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LSGPMSATTLEE*LRRSLCISRWP
Trigger: AGGCCACCTAGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp CATACACAGCCTCATACACATTGTAGGCAGCGCTCATaGAGAAGGCTCCAAGCTCGGGCATGTTCCATGTCG +
Preference number: 6 (lower is better)
Translates to: HTQPHTHCRQRS*RRLQARACSMS
Trigger: CGACATGGAACATGCCCGAGCTTGGAGCCTTCTCCATGAGCGCTGCCTACAATGTGTATGAGGCTGTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp ATGTTGTGTGCGAAAGCCACCAGGAAGCCCACAGAGTaGACCTCTGTGCACTCAAGAATCACCAGATGGGGG +
Preference number: 6 (lower is better)
Translates to: MLCAKATRKPTE*TSVHSRITRWG
Trigger: CCCCCATCTGGTGATTCTTGAGTGCACAGAGGTCAACTCTGTGGGCTTCCTGGTGGCTTTCGCACACAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp CAGAGCTGTGGAGTTGTTTATCTCCTCAACGGTGAACCGCATGGCTaGGAAGAGGTGATAGCCATGGCCGTTGAAGCTGTCAGACCTGTC +
Preference number: 6 (lower is better)
Translates to: QSCGVVYLLNGEPHG*EEVIAMAVEAVRPV
Trigger: GACAGGTCTGACAGCTTCAACGGCCATGGCTATCACCTCTTCCAAGCCATGCGGTTCACCGTTGAGGAGATAAACAACTCCACAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp GAAGCAGAGCTGTGGAGTTGTTTATCTCCTCAACGGTaGACCGCATGGCTTGGAAGAGGTGATAGCCATGGC +
Preference number: 6 (lower is better)
Translates to: EAELWSCLSPQR*TAWLGRGDSHG
Trigger: GCCATGGCTATCACCTCTTCCAAGCCATGCGGTTCACCGTTGAGGAGATAAACAACTCCACAGCTCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp GAGCACCCTCAGGGTGGCATAGACATTGGAAGACTCTaGGCACACGTCATACAGTTCATACCCCAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: EHPQGGIDIGRL*AHVIQFIPQGD
Trigger: ATCACCCTGGGGTATGAACTGTATGACGTGTGCTCAGAGTCTTCCAATGTCTATGCCACCCTGAGGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp GGAGTTGTTTATCTCCTCAACGGTGAACCGCATGGCTaGGAAGAGGTGATAGCCATGGCCGTTGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GVVYLLNGEPHG*EEVIAMAVEAV
Trigger: GACAGCTTCAACGGCCATGGCTATCACCTCTTCCAAGCCATGCGGTTCACCGTTGAGGAGATAAACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp TGGTCAGTGTTATCAGGCCCAATGAGTGCCACCACCTaGGAGGAGTGGTTGCGAAGATCTCTCTGCATCTCT +
Preference number: 6 (lower is better)
Translates to: WSVLSGPMSATT*EEWLRRSLCIS
Trigger: AGAGATGCAGAGAGATCTTCGCAACCACTCCTCCAAGGTGGTGGCACTCATTGGGCCTGATAACACTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp GTCCACATTGCAAGCCACGTGAGACAGAGGAACAAATaGACCGTGGAGCTGACAATGACGAATATTCCGGCA +
Preference number: 6 (lower is better)
Translates to: VHIASHVRQRNK*TVELTMTNIPA
Trigger: TGCCGGAATATTCGTCATTGTCAGCTCCACGGTCCATTTGTTCCTCTGTCTCACGTGGCTTGCAATGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp GGAGCTGACAATGACGAATATTCCGGCACCATGGTTTaGGGCCCAAGTGTGGTAGAATGTGGGTACCTTGGT +
Preference number: 6 (lower is better)
Translates to: GADNDEYSGTMV*GPSVVECGYLG
Trigger: ACCAAGGTACCCACATTCTACCACACTTGGGCCCAAAACCATGGTGCCGGAATATTCGTCATTGTCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS TCA 72 bp CAAAGGTCCATTCAGGTCCATTCCAGTCCCAGGCGATaGTGTCATAATAACCTAGAGGGTCCCCCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: QRSIQVHSSPRR*CHNNLEGPPCH
Trigger: ATGACAAGGGGGACCCTCTAGGTTATTATGACATCATCGCCTGGGACTGGAATGGACCTGAATGGACCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp ATGGACCGTGGAGCTGACAATGACGAATATTCCGGCACCATGGTTTaGGGCCCAAGTGTGGTAGAATGTGGGTACCTTGGTAGAAAACTT +
Preference number: 6 (lower is better)
Translates to: MDRGADNDEYSGTMV*GPSVVECGYLGRKL
Trigger: AAGTTTTCTACCAAGGTACCCACATTCTACCACACTTGGGCCCAAAACCATGGTGCCGGAATATTCGTCATTGTCAGCTCCACGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CCA 72 bp GATGGAGGCCTGAAAGTGTTCTGTGTTGTTGAGTTCTaGACGGCAGAGAATCACGTAGCATTTAGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: DGGLKVFCVVEF*TAENHVAFREE
Trigger: TTCCTCCCTAAATGCTACGTGATTCTCTGCCGTCCAGAACTCAACAACACAGAACACTTTCAGGCCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 90 bp ACACTGACACAGGCACCTGATTGTTCTTCCCGTGCCACTGGATTTTaGTCTTATTTATGTCTAGATGAACTGGAGACAGTGAGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: TLTQAPDCSSRATGF*SYLCLDELETVRQN
Trigger: GTTCTGCCTCACTGTCTCCAGTTCATCTAGACATAAATAAGACAAAAATCCAGTGGCACGGGAAGAACAATCAGGTGCCTGTGTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2
CDS CAA 72 bp CAGGCACCTGATTGTTCTTCCCGTGCCACTGGATTTTaGTCTTATTTATGTCTAGATGAACTGGAGACAGTG +
Preference number: 6 (lower is better)
Translates to: QAPDCSSRATGF*SYLCLDELETV
Trigger: CACTGTCTCCAGTTCATCTAGACATAAATAAGACAAAAATCCAGTGGCACGGGAAGAACAATCAGGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030792.2