Pregenerated sensors for TARSL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030515Ensembl transcript IDs: ENSMUST00000032728.9
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAGAGGTGGTGGCTGCTGGGGATGGAGCTCAGGCCTCATACATaGAACGCGGATGCTCTGGTCACGAAGCTACAGCCCCCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GERWWLLGMELRPHT*NADALVTKLQPPGW Trigger: CCAGCCTGGGGGCTGTAGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 90 bp | GTGGCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATaGTCTGGTCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTT | + |
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Preference number: 1 (lower is better) Translates to: VAAGDGAQASYMQRG*SGHEATAPRLEAHL Trigger: AAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CCA 90 bp | TTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTGCTaGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LKAYSCHCWVRGGGC*GWSSGLIHATRMLW Trigger: CCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 90 bp | TTATTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTaGTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLKAYSCHCWVRGGG*WGWSSGLIHATRML Trigger: GAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CCA 90 bp | TGGGCTTTTATTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTaGTGGCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCG | + |
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Preference number: 1 (lower is better) Translates to: WAFIESLFLSLLGER*WLLGMELRPHTCNA Trigger: CGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAATAAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CCA 90 bp | GCTTTTATTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTaGCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGAT | + |
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Preference number: 1 (lower is better) Translates to: AFIESLFLSLLGERW*LLGMELRPHTCNAD Trigger: ATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAATAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 90 bp | AATGGACACCATTTTATCACTGAGGTCTCTGGAGTCTTGATAGCTTaGAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAA | + |
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Preference number: 1 (lower is better) Translates to: NGHHFITEVSGVLIA*KFLQLLLFSLRTQQ Trigger: TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGATAAAATGGTGTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR-3UTR TCA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGACACCATTTTATCACTaGGGTCTCTGGAGTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SRSYSPQAGSTSFEKETKTPFYH*GLWSLD Trigger: ATCAAGACTCCAGAGACCTCAGTGATAAAATGGTGT...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CAA 90 bp | TACTTCTCTTATGATTGCACACTAAATGAAATAGCAATTCCAGCTTaGGGCATGAGTTTCAGTGTGAACTTTAGTAAAGCAGCCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: YFSYDCTLNEIAIPA*GMSFSVNFSKAAIK Trigger: TTTTATGGCTGCTTTACTAAAGTTCACACTGAAACTCATGCCCAAAGCTGGAATTGCTATTTCATTTAGTGTGCAATCATAAGAGAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 72 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATaGTCTGGTCACGAAGCTACAGCCCCCAGGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GDGAQASYMQRG*SGHEATAPRLE Trigger: TTCCAGCCTGGGGGCTGTAGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 72 bp | TGGTGGCTGCTGGGGATGGAGCTCAGGCCTCATACATaGAACGCGGATGCTCTGGTCACGAAGCTACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: WWLLGMELRPHT*NADALVTKLQP Trigger: GGGCTGTAGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CCA 72 bp | TGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTaGTCACGAAGCTACAGCCCCCAGGCTGGAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: WSSGLIHATRML*SRSYSPQAGST Trigger: TGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CCA 72 bp | GAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTaGCTGCTGGGGATGGAGCTCAGGCCTCATACATGC | + |
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Preference number: 3 (lower is better) Translates to: ESLFLSLLGERW*LLGMELRPHTC Trigger: GCATGTATGAGGCCTGAGCTCCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACCTAGTGTTCCCCTCTTaGAATGGACACCATTTTATC | + |
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Preference number: 3 (lower is better) Translates to: AAGDGAQASYMQRGCSGHLVFPS*NGHHFI Trigger: GATAAAATGGTGTCCATTCAAAGAGGGGAACACTAG...GTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTTGGAGTCTTGATAGCTaGCAAATTTCTCCAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GDGAQASYMQRGCSGHEAWSLDS*QISPAS Trigger: AGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCA...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTCTGGAAGCACATCTTTaGAGAAAGAAACAAAGCATG | + |
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Preference number: 3 (lower is better) Translates to: GDGAQASYMQRGCSGHEALEAHL*RKKQSM Trigger: CATGCTTTGTTTCTTTCTCAAAAGATGTGCTTCCAG...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR GCA 72 bp | CATTTTATCACTGAGGTCTCTGGAGTCTTGATAGCTTaGAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: HFITEVSGVLIA*KFLQLLLFSLR Trigger: TCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGATAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR-3UTR CAA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACTTTTCCTTCTTAGGTaGAACTCATTAGAGCCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LIACKFLQLLLFSLRTQQLFLLR*NSLEPY Trigger: GTAGGGCTCTAATGAGTTCAACCTAAGAAGGAAAAG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGTCCTCCTCCTGCCGCTaGAGGCGCGAGGCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: SRSYSPQAGSTSFEKETKSSSCR*RREATA Trigger: GGCGGTGGCCTCGCGCCTGCAGCGGCAGGAGGAGGA...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGTCGGGCCCGCGCAGCTaGTCGTCCCTCAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRSYSPQAGSTSFEKETKSGPRS*SSLRRC Trigger: GCAGCGCCTGAGGGACGAGCAGCTGCGCGGGCCCGA...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | GCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACATGTGCGCATCATCTTaGTGGAAGCGCCTCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: AAGDGAQASYMQRGCSGHMCASS*WKRLTR Trigger: CCGAGTGAGGCGCTTCCAGCAAGATGATGCGCACAT...GTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACTCCTTCTCTTGGTTTTaGGTAGGAGGCTCGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: AAGDGAQASYMQRGCSGHSFSWF*VGGSCA Trigger: GGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGA...GTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | TTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTGCTGGGGATGGCTGGGCCTACTGGGATaGCCATTACCTGGCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LKAYSCHCWVRGGGCWGWLGLLG*PLPGEG Trigger: CCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAG...CCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | GCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGGAGAGTGTCCTTGCTaGCTTCCAGTCTTTCAAACG | + |
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Preference number: 4 (lower is better) Translates to: AAGDGAQASYMQRGCSGHGECPC*LPVFQT Trigger: CGTTTGAAAGACTGGAAGTCAGCAAGGACACTCTCC...GTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTCCCATTTTCAATGGGTaGGCCATAACACAGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GDGAQASYMQRGCSGHEAPIFNG*AITQVA Trigger: GGCCACCTGTGTTATGGCCCACCCATTGAAAATGGG...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTATGCTGCCAGTGGCCTaGTGTTTCCCAGAGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: GDGAQASYMQRGCSGHEAMLPVA*CFPEFT Trigger: AGTAAACTCTGGGAAACATCAGGCCACTGGCAGCAT...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTGCTGGGGATGGTGCGCATCATCTTGCTaGAAGCGCCTCACTCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LKAYSCHCWVRGGGCWGWCASSC*KRLTRV Trigger: AACCCGAGTGAGGCGCTTCCAGCAAGATGATGCGCA...CCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | TGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAGTGGACAGGTTTAATTaGAAGGAGAAGCCAAACGTC | + |
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Preference number: 4 (lower is better) Translates to: CWGWSSGLIHATRMLWSRVDRFN*KEKPNV Trigger: GACGTTTGGCTTCTCCTTTCAATTAAACCTGTCCAC...TCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGATTTCCATCTCAGGGTTaGCTTCCCAATATGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CWGWSSGLIHATRMLWSRFPSQG*LPNMLR Trigger: CCTCAACATATTGGGAAGGCAACCCTGAGATGGAAA...TCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACGGATGTCCTCCTCCTaGCGCTGCAGGCGCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQRMSSS*RCRREA Trigger: GGCCTCGCGCCTGCAGCGGCAGGAGGAGGACATCCG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGCCAGGATGTGAGCGCTaGAATGCCAGTACACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SRSYSPQAGSTSFEKETKPGCER*NASTQP Trigger: AGGCTGTGTACTGGCATTCCAGCGCTCACATCCTGG...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTGAATGCTCCATCTCCTaGGTTTATTTTCCATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GDGAQASYMQRGCSGHEAECSIS*VYFPWF Trigger: AAACCATGGAAAATAAACCCAGGAGATGGAGCATTC...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCTCGTCCCTCAGGCGCTaGACCTCCGCGCACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ENTFQKSKQGYIEAQGEASSLRR*TSAHSQ Trigger: CTGGCTGTGCGCGGAGGTGCAGCGCCTGAGGGACGA...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAATACTGAGCCAGCTGTaGATTCCGTATTTTCTTATT | + |
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Preference number: 4 (lower is better) Translates to: CWGWSSGLIHATRMLWSRILSQL*IPYFLI Trigger: AATAAGAAAATACGGAATGCACAGCTGGCTCAGTAT...TCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTGCTGGGGATGGATTTCTTCTTCGATCTaGTCCACCATGCAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LKAYSCHCWVRGGGCWGWISSSI*STMQKM Trigger: CATCTTCTGCATGGTGGAGCAGATCGAAGAAGAAAT...CCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAATCGCGGTTCTCCGCCTaGAGCTGTGCCACCTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQSRFSA*SCATSR Trigger: ACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGA...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TTGAAAGCCTATTCCTGTCATTGTTGGGTGAGAGGTGGTGGCTGCTGGGGATGGATAATTTTCACAAGCTaGGCCTACTGGGATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: LKAYSCHCWVRGGGCWGWIIFTS*AYWDDH Trigger: ATGGTCATCCCAGTAGGCCCAGCTTGTGAAAATTAT...CCATCCCCAGCAGCCACCACCTCTCACCCAACAATGACAGGAATAGGCTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTCCACCTTTCTCCTTaGACTGTCTTCCCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLFHLSP*TVFPPA Trigger: GGCTGGTGGGAAGACAGTGCAAGGAGAAAGGTGGAA...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAGACAGTTCATGGGTTTaGGGGCGAAAGTGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLDSSWV*GRKCPS Trigger: AGAAGGACACTTTCGCCCTCAAACCCATGAACTGTC...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTACGATCTGCTCCACCATaGAGAAGATGTGCGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLRSAPP*RRCAHH Trigger: ATGATGCGCACATCTTCTGCATGGTGGAGCAGATCG...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGAGTTCTCTGAGAGGATaGCTATCATCCTTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SRSYSPQAGSTSFEKETKSSLRG*LSSFPQ Trigger: CTGTGGAAAGGATGATAGCCATCCTCTCAGAGAACT...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAAAGCTGTTCTGCAGTTaGCTTTCAGCTTCATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLKLFCS*LSASSH Trigger: ATGGGATGAAGCTGAAAGGCAACTGCAGAACAGCTT...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCATCTCTCCTAGGAAGTaGTCAGGCCTTGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: ENTFQKSKQGYIEAQGEAISPRK*SGLVDR Trigger: CCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGAT...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAACGGACTGTAAAAAGTaGAAGCACCCCTTTATTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLTDCKK*KHPFIS Trigger: AGAAATAAAGGGGTGCTTGCACTTTTTACAGTCCGT...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAACAAAGGTCAATCAATaGACCACACCTGTAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: ITEVSGVLIACKFLQLLLTKVNQ*TTPVNS Trigger: ACTGTTTACAGGTGTGGTCCATTGATTGACCTTTGT...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAAACCATGCAGAAGATGTaGGCATCATCTTGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQTMQKM*ASSCWK Trigger: CTTCCAGCAAGATGATGCGCACATCTTCTGCATGGT...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR GCA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCTCCACCAAGCTGTTCTaGAGTTGCCTTTCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ENTFQKSKQGYIEAQGEASTKLF*SCLSAS Trigger: TGAAGCTGAAAGGCAACTGCAGAACAGCTTGGTGGA...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCCCAGTGTGTCTTACATaGGGGCCTTTACAAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENTFQKSKQGYIEAQGEAPVCLT*GPLQRS Trigger: TGACCTTTGTAAAGGCCCCCATGTAAGACACACTGG...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR TCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACGCCAACCACCAAAATaGAATTATACTGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQRQPPK*NYTEPA Trigger: AGCTGGCTCAGTATAATTTCATTTTGGTGGTTGGCG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAAAGTGCTCAGGCCTTGTaGACAGGTTTAATTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQSAQAL*TGLIER Trigger: CCTTTCAATTAAACCTGTCCACAAGGCCTGAGCACT...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CCA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACTTCGAAGCATTCCTTaGACACCTGTAGTGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIACKFLQLLLFSLRTQQLRSIP*TPVVHN Trigger: ATTATGCACTACAGGTGTCCAAGGAATGCTTCGAAG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CAA 72 bp | TATGATTGCACACTAAATGAAATAGCAATTCCAGCTTaGGGCATGAGTTTCAGTGTGAACTTTAGTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YDCTLNEIAIPA*GMSFSVNFSKA Trigger: TGCTTTACTAAAGTTCACACTGAAACTCATGCCCAAAGCTGGAATTGCTATTTCATTTAGTGTGCAATCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| 3UTR CAA 72 bp | ACTCACAATGCAAATAACAGATTGTACAAAATCTCTTaGAGGTTTCATAGTCCTTTGCCACTAACAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: THNANNRLYKIS*RFHSPLPLTGY Trigger: ATATCCTGTTAGTGGCAAAGGACTATGAAACCTCAAAGAGATTTTGTACAATCTGTTATTTGCATTGTGAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 90 bp | GTAGGAGGCTCGTGCGCCGCCGCTCGCCCGGCCTCGGTGCGGCGCTaGTCCGCCAGGCGCAGCCGCAGGCCACACAGGCGCTGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGGSCAAARPASVRR*SARRSRRPHRRWCR Trigger: CCTGCACCAGCGCCTGTGTGGCCTGCGGCTGCGCCTGGCGGAGCAGCGCCGCACCGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTAC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 90 bp | GTCAGGCGCGGGCCCTCGGCTTGGCCCCGCTCGGGCCCGCGCAGCTaGTCGTCCCTCAGGCGCTGCACCTCCGCGCACAGCCAGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VRRGPSAWPRSGPRS*SSLRRCTSAHSQRM Trigger: CATCCGCTGGCTGTGCGCGGAGGTGCAGCGCCTGAGGGACGAGCAGCTGCGCGGGCCCGAGCGGGGCCAAGCCGAGGGCCCGCGCCTGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | GCCTGGAGCTGTGCCACCTCGCGTGTCAGGCGCGGGCCCTCGGCTTaGCCCCGCTCGGGCCCGCGCAGCTGCTCGTCCCTCAGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWSCATSRVRRGPSA*PRSGPRSCSSLRRC Trigger: GCAGCGCCTGAGGGACGAGCAGCTGCGCGGGCCCGAGCGGGGCCAAGCCGAGGGCCCGCGCCTGACACGCGAGGTGGCACAGCTCCAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 90 bp | CGGCGCTGCTCCGCCAGGCGCAGCCGCAGGCCACACAGGCGCTGGTaGAGGTCGCGGTTCTCCGCCTGGAGCTGTGCCACCTCGCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRCSARRSRRPHRRW*RSRFSAWSCATSRV Trigger: GACACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGCCTGCGGCTGCGCCTGGCGGAGCAGCGCCG 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | GTGCGGCGCTGCTCCGCCAGGCGCAGCCGCAGGCCACACAGGCGCTaGTGCAGGTCGCGGTTCTCCGCCTGGAGCTGTGCCACCTCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VRRCSARRSRRPHRR*CRSRFSAWSCATSR Trigger: ACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGCCTGCGGCTGCGCCTGGCGGAGCAGCGCCGCAC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | AGCCGCAGGCCACACAGGCGCTGGTGCAGGTCGCGGTTCTCCGCCTaGAGCTGTGCCACCTCGCGTGTCAGGCGCGGGCCCTCGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRPHRRWCRSRFSA*SCATSRVRRGPSAW Trigger: CCAAGCCGAGGGCCCGCGCCTGACACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGCCTGCGGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 90 bp | CTCTTCTTCTTTGTGTCCTTCTCTTGGTTTTGGGTAGGAGGCTCGTaGGCCGCCGCTCGCCCGGCCTCGGTGCGGCGCTGCTCCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFFFVSFSWFWVGGS*AAARPASVRRCSAR Trigger: CCTGGCGGAGCAGCGCCGCACCGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGACACAAAGAAGAAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | CCAGGCTCACTCTGCTTCAGCCTCTTCTTCTTTGTGTCCTTCTCTTaGTTTTGGGTAGGAGGCTCGTGCGCCGCCGCTCGCCCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSLCFSLFFFVSFS*FWVGGSCAAARPAS Trigger: CGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGACACAAAGAAGAAGAGGCTGAAGCAGAGTGAGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | CAATGGGTGGGCCATAACACAGGTGGCCTCCATAGTAAAGTTCCATaGCCTCCCCCAGGATGTGAGCGCTGGAATGCCAGTACACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QWVGHNTGGLHSKVP*PPPGCERWNASTQP Trigger: AGGCTGTGTACTGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACTATGGAGGCCACCTGTGTTATGGCCCACCCATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 90 bp | TGGACACCTGTAGTGCATAATTTTCACAAGCTGGGCCTACTGGGATaGCCATTACCTGGCGAGGGGACAGCCAGAGAGGCCATTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTPVVHNFHKLGLLG*PLPGEGTAREAISP Trigger: GGGGGAAATGGCCTCTCTGGCTGTCCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAGCTTGTGAAAATTATGCACTACAGGTGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | GGCCTCCATAGTAAAGTTCCATGGCCTCCCCCAGGATGTGAGCGCTaGAATGCCAGTACACAGCCTGGGCTTCCTCGTTGTCAAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: GLHSKVPWPPPGCER*NASTQPGLPRCQTS Trigger: TGATGTTTGACAACGAGGAAGCCCAGGCTGTGTACTGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACTATGGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | GGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAAGCTATCACAGGCCTGTTCTaGTCATCCCCATCCTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: GDGAQASYMQRGCSGHEAITGLF*SSPSLL Trigger: GAGTAAGGATGGGGATGACAAGAACAGGCCTGTGAT...AGCTTCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACAATTCCAGCGGCCACTaGATAAGGTGTTGTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAGDGAQASYMQRGCSGHNSSGH*IRCCFP Trigger: TGGAAAACAACACCTTATCAAGTGGCCGCTGGAATT...GTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGATGGAGCTCAGGCCTCATACATGCAACGCGGATGCTCTGGTCACGAGGAAGTGCTCAGGCCTaGTGGACAGGTTTAATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CWGWSSGLIHATRMLWSRGSAQA*WTGLIE Trigger: TTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCC...TCGTGACCAGAGCATCCGCGTTGCATGTATGAGGCCTGAGCTCCATCCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 90 bp | GAGAGGATGGCTATCATCCTTTCCACAGACCCCAGGATGGCGCGGTaGATGATCACAGGCCTGTTCTTGTCATCCCCATCCTTACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ERMAIILSTDPRMAR*MITGLFLSSPSLLT Trigger: TGTGAGTAAGGATGGGGATGACAAGAACAGGCCTGTGATCATTCACCGCGCCATCCTGGGGTCTGTGGAAAGGATGATAGCCATCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 90 bp | GGATGGCTATCATCCTTTCCACAGACCCCAGGATGGCGCGGTGAATaGTCACAGGCCTGTTCTTGTCATCCCCATCCTTACTCACATATG | + |
|
Preference number: 5 (lower is better) Translates to: GWLSSFPQTPGWRGE*SQACSCHPHPYSHM Trigger: CATATGTGAGTAAGGATGGGGATGACAAGAACAGGCCTGTGATCATTCACCGCGCCATCCTGGGGTCTGTGGAAAGGATGATAGCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAGATGTGCGCATCATCTaGCTGGAAGCGCCTCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: ITEVSGVLIACKFLQLLLDVRII*LEAPHS Trigger: CGAGTGAGGCGCTTCCAGCAAGATGATGCGCACATC...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | TTTTCCAGTGTGTCTTACATGGGGGCCTTTACAAAGGTCAATCAATaGACCACACCTGTAAACAGTGGTCGTCGGAGTGTCCACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSSVSYMGAFTKVNQ*TTPVNSGRRSVHFL Trigger: GAGAAAGTGGACACTCCGACGACCACTGTTTACAGGTGTGGTCCATTGATTGACCTTTGTAAAGGCCCCCATGTAAGACACACTGGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTACTGTGGTCCCGGCTCTaGGCTTCCTCTTGGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITEVSGVLIACKFLQLLLLWSRL*ASSWNF Trigger: AAAATTCCAAGAGGAAGCCAAGAGCCGGGACCACAG...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 90 bp | CTTCATCCCATATCTCAATCTCTCCTAGGAAGTGCTCAGGCCTTGTaGACAGGTTTAATTGAAAGGAGAAGCCAAACGTCGAGTAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LHPISQSLLGSAQAL*TGLIERRSQTSSKR Trigger: CCGTTTACTCGACGTTTGGCTTCTCCTTTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGATTGAGATATGGGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATCCAGGAGAGTGTCCTaGCTGACTTCCAGTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITEVSGVLIACKFLQLLLSRRVS*LTSSLS Trigger: TGAAAGACTGGAAGTCAGCAAGGACACTCTCCTGGA...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGAAACCTGATAGGCAGTaGGAAGTCCAGCTGAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRSYSPQAGSTSFEKETKKPDRQ*EVQLNC Trigger: ACAATTCAGCTGGACTTCCAACTGCCTATCAGGTTT...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCGTCCTTCTCTTGGTTTaGGGTAGGAGGCTCGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ENTFQKSKQGYIEAQGEAVLLLV*GRRLVR Trigger: GCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGAC...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATCCCAGAGTTTACTGTaGTACATGTTGGGAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITEVSGVLIACKFLQLLLSQSLL*YMLGES Trigger: GCTCTCTCCCAACATGTACAACAGTAAACTCTGGGA...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TCACGAAGCTACAGCCCCCAGGCTGGAAGCACATCTTTTGAGAAAGAAACAAAGCTGAAATCACGTTGTTaGTGTTCTTCTTTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSYSPQAGSTSFEKETKLKSRC*CSSFPE Trigger: CTCAGGAAAAGAAGAACACAAACAACGTGATTTCAG...CTTTGTTTCTTTCTCAAAAGATGTGCTTCCAGCCTGGGGGCTGTAGCTTCGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | ATCACTGAGGTCTCTGGAGTCTTGATAGCTTGCAAATTTCTCCAGCTTCTCCTAGCTCTTGGCTTCCTCTaGGAATTTTTCCCAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITEVSGVLIACKFLQLLLALGFL*EFFPVF Trigger: AAAGACTGGGAAAAATTCCAAGAGGAAGCCAAGAGC...TAGGAGAAGCTGGAGAAATTTGCAAGCTATCAAGACTCCAGAGACCTCAGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAATTTCCACCTTTCTCCTaGCACTGTCTTCCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIACKFLQLLLFSLRTQQFPPFS*HCLPTS Trigger: GCTGGTGGGAAGACAGTGCAAGGAGAAAGGTGGAAA...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCGGACAGTTCATGGGTTaGAGGGCGAAAGTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENTFQKSKQGYIEAQGEAGQFMG*RAKVSF Trigger: GAAGGACACTTTCGCCCTCAAACCCATGAACTGTCC...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCCTTTGTGTCCTTCTCTaGGTTTTGGGTAGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ENTFQKSKQGYIEAQGEALCVLL*VLGRRL Trigger: GAGCCTCCTACCCAAAACCAAGAGAAGGACACAAAG...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 90 bp | TTTTCTTATTTAGTGTACAACTGTCATCTAAGTCCACATCGGCCATaGAGCCTTCTTCGAAGCATTCCTTGGACACCTGTAGTGCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSYLVYNCHLSPHRP*SLLRSIPWTPVVHN Trigger: ATTATGCACTACAGGTGTCCAAGGAATGCTTCGAAGAAGGCTTCATGGCCGATGTGGACTTAGATGACAGTTGTACACTAAATAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | GAAAATACATTTCAGAAGTCAAAACAAGGTTATATAGAAGCCCAAGGAGAAGCCGTTTCCATCTCAGGGTaGCCTTCCCAATATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ENTFQKSKQGYIEAQGEAVSISG*PSQYVE Trigger: CTCAACATATTGGGAAGGCAACCCTGAGATGGAAAC...GGCTTCTCCTTGGGCTTCTATATAACCTTGTTTTGACTTCTGAAATGTATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACCACTTGATAAGGTGTaGTTTTCCACCTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIACKFLQLLLFSLRTQQPLDKV*FSTFLL Trigger: AAGGAGAAAGGTGGAAAACAACACCTTATCAAGTGG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACTCACTGAAATCACGTaGTTTGTGTTCTTCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIACKFLQLLLFSLRTQQLTEIT*FVFFFS Trigger: GGAAAAGAAGAACACAAACAACGTGATTTCAGTGAG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS-3UTR CAA 90 bp | TTGATAGCTTGCAAATTTCTCCAGCTTCTCCTATTTAGTCTCAGAACACAACAACAGTCTTTCATCATTTaGCTGTCAGGAAAGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: LIACKFLQLLLFSLRTQQQSFII*LSGKDI Trigger: GATATCCTTTCCTGACAGCAAAATGATGAAAGACTG...TTGTTGTGTTCTGAGACTAAATAGGAGAAGCTGGAGAAATTTGCAAGCTATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS GCA 72 bp | GGGCCCTCGGCTTGGCCCCGCTCGGGCCCGCGCAGCTaGTCGTCCCTCAGGCGCTGCACCTCCGCGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPSAWPRSGPRS*SSLRRCTSAHS Trigger: GCTGTGCGCGGAGGTGCAGCGCCTGAGGGACGAGCAGCTGCGCGGGCCCGAGCGGGGCCAAGCCGAGGGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS CCA 72 bp | TGTGCCACCTCGCGTGTCAGGCGCGGGCCCTCGGCTTaGCCCCGCTCGGGCCCGCGCAGCTGCTCGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CATSRVRRGPSA*PRSGPRSCSSL Trigger: GAGGGACGAGCAGCTGCGCGGGCCCGAGCGGGGCCAAGCCGAGGGCCCGCGCCTGACACGCGAGGTGGCACA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS GCA 72 bp | GCGCTGGTGCAGGTCGCGGTTCTCCGCCTGGAGCTGTaGCACCTCGCGTGTCAGGCGCGGGCCCTCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALVQVAVLRLEL*HLACQARALGL Trigger: CAAGCCGAGGGCCCGCGCCTGACACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS GCA 72 bp | TCCGCCAGGCGCAGCCGCAGGCCACACAGGCGCTGGTaGAGGTCGCGGTTCTCCGCCTGGAGCTGTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SARRSRRPHRRW*RSRFSAWSCAT Trigger: GGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGCCTGCGGCTGCGCCTGGCGGA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS CCA 72 bp | TGCTCCGCCAGGCGCAGCCGCAGGCCACACAGGCGCTaGTGCAGGTCGCGGTTCTCCGCCTGGAGCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSARRSRRPHRR*CRSRFSAWSCA Trigger: GGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGCCTGCGGCTGCGCCTGGCGGAGCA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
||
| CDS GCA 72 bp | TTTGTGTCCTTCTCTTGGTTTTGGGTAGGAGGCTCGTaGGCCGCCGCTCGCCCGGCCTCGGTGCGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FVSFSWFWVGGS*AAARPASVRRC Trigger: GCAGCGCCGCACCGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGACACAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CAA 90 bp | CTCACTCTGCTTCAGCCTCTTCTTCTTTGTGTCCTTCTCTTGGTTTaGGGTAGGAGGCTCGTGCGCCGCCGCTCGCCCGGCCTCGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LTLLQPLLLCVLLLV*GRRLVRRRSPGLGA Trigger: CGCACCGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGACACAAAGAAGAAGAGGCTGAAGCAGAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | CTCTGCTTCAGCCTCTTCTTCTTTGTGTCCTTCTCTTaGTTTTGGGTAGGAGGCTCGTGCGCCGCCGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LCFSLFFFVSFS*FWVGGSCAAAR Trigger: GCGAGCGGCGGCGCACGAGCCTCCTACCCAAAACCAAGAGAAGGACACAAAGAAGAAGAGGCTGAAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | AGTAAAGTTCCATGGCCTCCCCCAGGATGTGAGCGCTaGAATGCCAGTACACAGCCTGGGCTTCCTCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SKVPWPPPGCER*NASTQPGLPRC Trigger: ACAACGAGGAAGCCCAGGCTGTGTACTGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | GGCCATAACACAGGTGGCCTCCATAGTAAAGTTCCATaGCCTCCCCCAGGATGTGAGCGCTGGAATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GHNTGGLHSKVP*PPPGCERWNAS Trigger: ACTGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACTATGGAGGCCACCTGTGTTATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 72 bp | GCTATCATCCTTTCCACAGACCCCAGGATGGCGCGGTaGATGATCACAGGCCTGTTCTTGTCATCCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: AIILSTDPRMAR*MITGLFLSSPS Trigger: GGATGGGGATGACAAGAACAGGCCTGTGATCATTCACCGCGCCATCCTGGGGTCTGTGGAAAGGATGATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 72 bp | GTAGTGCATAATTTTCACAAGCTGGGCCTACTGGGATaGCCATTACCTGGCGAGGGGACAGCCAGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VVHNFHKLGLLG*PLPGEGTAREA Trigger: GGCCTCTCTGGCTGTCCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAGCTTGTGAAAATTATGCACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 72 bp | TCATCCTTTCCACAGACCCCAGGATGGCGCGGTGAATaGTCACAGGCCTGTTCTTGTCATCCCCATCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SSFPQTPGWRGE*SQACSCHPHPY Trigger: GTAAGGATGGGGATGACAAGAACAGGCCTGTGATCATTCACCGCGCCATCCTGGGGTCTGTGGAAAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 72 bp | AAATTCGGTTGCTTCACCTCCCGGCCAGGCTCACTCTaGTTCAGCCTCTTCTTCTTTGTGTCCTTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: KFGCFTSRPGSL*FSLFFFVSFSW Trigger: CCAAGAGAAGGACACAAAGAAGAAGAGGCTGAAGCAGAGTGAGCCTGGCCGGGAGGTGAAGCAACCGAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 72 bp | GCTGGAAGCGCCTCACTCGGGTTAAGCCGCTTAAAGTaGCTGACAGCTCATTTCTGTGAAGAACTCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: AGSASLGLSRLK*LTAHFCEELQN Trigger: ATTTTGGAGTTCTTCACAGAAATGAGCTGTCAGGCACTTTAAGCGGCTTAACCCGAGTGAGGCGCTTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | GTGTCTTACATGGGGGCCTTTACAAAGGTCAATCAATaGACCACACCTGTAAACAGTGGTCGTCGGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSYMGAFTKVNQ*TTPVNSGRRSV Trigger: GACACTCCGACGACCACTGTTTACAGGTGTGGTCCATTGATTGACCTTTGTAAAGGCCCCCATGTAAGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | TACAAAGGTCAATCAATGGACCACACCTGTAAACAGTaGTCGTCGGAGTGTCCACTTTCTCCTTCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: YKGQSMDHTCKQ*SSECPLSPSES Trigger: GGATTCTGAAGGAGAAAGTGGACACTCCGACGACCACTGTTTACAGGTGTGGTCCATTGATTGACCTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CAA 72 bp | CCCATATCTCAATCTCTCCTAGGAAGTGCTCAGGCCTaGTGGACAGGTTTAATTGAAAGGAGAAGCCAAACG | + |
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Preference number: 6 (lower is better) Translates to: PISQSLLGSAQA*WTGLIERRSQT Trigger: CGTTTGGCTTCTCCTTTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGATTGAGATATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CAA 90 bp | CAGCTTCATCCCATATCTCAATCTCTCCTAGGAAGTGCTCAGGCCTaGTGGACAGGTTTAATTGAAAGGAGAAGCCAAACGTCGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: QLHPISQSLLGSAQA*WTGLIERRSQTSSK Trigger: TTTACTCGACGTTTGGCTTCTCCTTTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGATTGAGATATGGGATGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 72 bp | TTAGTGTACAACTGTCATCTAAGTCCACATCGGCCATaGAGCCTTCTTCGAAGCATTCCTTGGACACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LVYNCHLSPHRP*SLLRSIPWTPV Trigger: TACAGGTGTCCAAGGAATGCTTCGAAGAAGGCTTCATGGCCGATGTGGACTTAGATGACAGTTGTACACTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 72 bp | AAAAAGTGCAAGCACCCCTTTATTTCTTCTTCGATCTaGTCCACCATGCAGAAGATGTGCGCATCATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KKCKHPFISSSI*STMQKMCASSC Trigger: GCAAGATGATGCGCACATCTTCTGCATGGTGGAGCAGATCGAAGAAGAAATAAAGGGGTGCTTGCACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CCA 72 bp | ATATCTCAATCTCTCCTAGGAAGTGCTCAGGCCTTGTaGACAGGTTTAATTGAAAGGAGAAGCCAAACGTCG | + |
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Preference number: 6 (lower is better) Translates to: ISQSLLGSAQAL*TGLIERRSQTS Trigger: CGACGTTTGGCTTCTCCTTTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGATTGAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CAA 72 bp | ATGTTCAGCCAATTCCTTACTAATTCCAGCGGCCACTaGATAAGGTGTTGTTTTCCACCTTTCTCCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: MFSQFLTNSSGH*IRCCFPPFSLH Trigger: GTGCAAGGAGAAAGGTGGAAAACAACACCTTATCAAGTGGCCGCTGGAATTAGTAAGGAATTGGCTGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS TCA 72 bp | ATGTTGGGAGAGAGCACTTCTGTGAAGTTACGCTTGTaGTATTCCTCTCGTATGAAATCCATAAGCGCATTG | + |
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Preference number: 6 (lower is better) Translates to: MLGESTSVKLRL*YSSRMKSISAL Trigger: CAATGCGCTTATGGATTTCATACGAGAGGAATATCACAAGCGTAACTTCACAGAAGTGCTCTCTCCCAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS GCA 72 bp | ATTTTCCATGGTTTTCCAAATTCCACCAAGCTGTTCTaGAGTTGCCTTTCAGCTTCATCCCATATCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: IFHGFPNSTKLF*SCLSASSHISI Trigger: GATTGAGATATGGGATGAAGCTGAAAGGCAACTGCAGAACAGCTTGGTGGAATTTGGAAAACCATGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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| CDS CAA 72 bp | CAGAAGTCTTCCTCGGCATTTAGCGTACGTGATTTTTaGAGGTTCTTCAATTTTTCAATGACGGAAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: QKSSSAFSVRDF*RFFNFSMTEAI Trigger: AATAGCTTCCGTCATTGAAAAATTGAAGAACCTCAAAAAATCACGTACGCTAAATGCCGAGGAAGACTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032728.9 |
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