Pregenerated sensors for TARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022241Ensembl transcript IDs: ENSMUST00000022849.7, ENSMUST00000228814.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGCTGCAGCCGCCGCACCGTCTCCTCCACTGTCCGCTCTCCGTaGACCTTATTGTCTCTCGTGCGGATGTTCACCGTGCCACTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SCCSRRTVSSTVRSP*TLLSLVRMFTVPLA Trigger: AGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGGAGGAGACGGTGCGGCGGCTGCAGCAGCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR GCA 90 bp | TGTACAAGGTCTTCCCTGACACGGCGCCAGCTCGGGCACAGCGTGTaGCTGCTAGAACTCCTCCTCTGCCTGCTTGCTGCGCGTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: CTRSSLTRRQLGHSV*LLELLLCLLAARLL Trigger: AAGCAGACGCGCAGCAAGCAGGCAGAGGAGGAGTTCTAGCAGGCACACGCTGTGCCCGAGCTGGCGCCGTGTCAGGGAAGACCTTGTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR TCA 90 bp | CACTGGAGTGCCAGTATACGGCCTGCGCTTCCTCGTCCTCAAACTTaGGCAGCTCCAACGTGCAATCTGTCTCCAGCGGGCGGTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: HWSASIRPALPRPQT*AAPTCNLSPAGGPG Trigger: ACCTGGACCGCCCGCTGGAGACAGATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGAAGCGCAGGCCGTATACTGGCACTCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR TCA 90 bp | CAAAGGCCGATTCATGCAGACTGCAGAGCTACTCCACGCTCGGCCTaGAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACG | + |
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Preference number: 1 (lower is better) Translates to: QRPIHADCRATPRSA*SHACFPVYKVFPDT Trigger: CGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGGCCGAGCGTGGAGTAGCTCTGCAGTCTGCATGAATCGGCCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR GCA 90 bp | CCGTCTCCTCCACTGTCCGCTCTCCGTGGACCTTATTGTCTCTCGTaGGGATGTTCACCGTGCCACTGGCTTTCTCTTTTTCACCAACAA | + |
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Preference number: 1 (lower is better) Translates to: PSPPLSALRGPYCLS*GCSPCHWLSLFHQQ Trigger: TTGTTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGGAGGAGACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR GCA 90 bp | GGAACTTCTCCCACTCTTTCAGTAGCTTGGGGTCAGGGAATGAAATaGCATAGATCCGCTGGAGCGTCTCCATGTCTGCTTTGCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GTSPTLSVAWGQGMK*HRSAGASPCLLCLP Trigger: GGGAAGGCAAAGCAGACATGGAGACGCTCCAGCGGATCTATGGCATTTCATTCCCTGACCCCAAGCTACTGAAAGAGTGGGAGAAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR GCA 90 bp | AGAAACGGTTATCTCCCTTCACCTGTAACCCTTCTGTCAGAGCACTaGTCCACAGGGCAGTATACCTGCTCCATGGCACAGAAGATGTGT | + |
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Preference number: 1 (lower is better) Translates to: RNGYLPSPVTLLSEH*STGQYTCSMAQKMC Trigger: ACACATCTTCTGTGCCATGGAGCAGGTATACTGCCCTGTGGAGCAGTGCTCTGACAGAAGGGTTACAGGTGAAGGGAGATAACCGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR TCA 90 bp | TTCTTGTGTATCTTCAAAGTCTTAATCTTGCCGGTGTGTCGGACATaGGGACCCCGGCAGAGATCTATCAGAGGGCCACATCTAAGGATG | + |
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Preference number: 1 (lower is better) Translates to: FLCIFKVLILPVCRT*GPRQRSIRGPHLRM Trigger: CATCCTTAGATGTGGCCCTCTGATAGATCTCTGCCGGGGTCCTCATGTCCGACACACCGGCAAGATTAAGACTTTGAAGATACACAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR GCA 90 bp | GGAATGAAATGCCATAGATCCGCTGGAGCGTCTCCATGTCTGCTTTaGCTTCCCAGTACGTGGAAGAATTCTTGTGTATCTTCAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: GMKCHRSAGASPCLL*LPSTWKNSCVSSKS Trigger: AGACTTTGAAGATACACAAGAATTCTTCCACGTACTGGGAAGGCAAAGCAGACATGGAGACGCTCCAGCGGATCTATGGCATTTCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR CCA 90 bp | GTCATCCAGAGCCGGCTATTGAAGATGTTGGGAGTGACGACCTCCTaGAACCCTCTTTTCCTATATTCACTCCTGATAAATTCCATTAGT | + |
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Preference number: 1 (lower is better) Translates to: VIQSRLLKMLGVTTS*NPLFLYSLLINSIS Trigger: ACTAATGGAATTTATCAGGAGTGAATATAGGAAAAGAGGGTTCCAGGAGGTCGTCACTCCCAACATCTTCAATAGCCGGCTCTGGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR CAA 90 bp | GCACTGGAGTGCCAGTATACGGCCTGCGCTTCCTCGTCCTCAAACTaGAGCAGCTCCAACGTGCAATCTGTCTCCAGCGGGCGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALECQYTACASSSSN*SSSNVQSVSSGRSR Trigger: CCTGGACCGCCCGCTGGAGACAGATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGAAGCGCAGGCCGTATACTGGCACTCCAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR CAA 90 bp | AGCCGCCGCACCGTCTCCTCCACTGTCCGCTCTCCGTGGACCTTATaGTCTCTCGTGCGGATGTTCACCGTGCCACTGGCTTTCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SRRTVSSTVRSPWTL*SLVRMFTVPLAFSF Trigger: AAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGGAGGAGACGGTGCGGCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGCCGGTGTGTCGGACATaGGGACCCCGGCAGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: NAKTICPEGSRHAVQTGLPVCRT*GPRQRS Trigger: AGATCTCTGCCGGGGTCCTCATGTCCGACACACCGG...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCACAAAGTTTCCAGGGAAGAGAAGTCATTGCTGGACACGCCCCCTTCTTACTCCACGCTCGGCCTaGAGCCACGCTTGCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: SCTKFPGKRSHCWTRPLLTPRSA*SHACFP Trigger: CGGGAAGCAAGCGTGGCTTCAGGCCGAGCGTGGAGT...AAGAAGGGGGCGTGTCCAGCAATGACTTCTCTTCCCTGGAAACTTTGTGCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCCTTGGTGGTGAGGTGTaGATGCGCCTAGCATTCATC | + |
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Preference number: 2 (lower is better) Translates to: CNPVPREKGSGPVNALKGLGGEV*MRLAFI Trigger: GATGAATGCTAGGCGCATGCACACCTCACCACCAAG...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | TCGTGCGGATGTTCACCGTGCCACTGGCTTTCTCTTTTTCACCAACAACAAGGAATGTGGGCACTGGAGTaGCAGTATACGGCCTGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SCGCSPCHWLSLFHQQQGMWALE*QYTACA Trigger: AGCGCAGGCCGTATACTGGCACTCCAGTGCCCACAT...TCCTTGTTGTTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCACTCCACGCTCGGCCTaGAGCCACGCTTGCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCTPRSA*SHACFP Trigger: CGGGAAGCAAGCGTGGCTTCAGGCCGAGCGTGGAGT...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCGGTGCGGCTTGGTGGTaGGGTGTGCATGCGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCGAAWW*GVHAPS Trigger: GCTAGGCGCATGCACACCTCACCACCAAGCCGCACC...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGGGCACAGAAGATGTGTaGGTCATCCTGCTGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: NAKTICPEGSRHAVQTGLGTEDV*VILLES Trigger: AGATTCCAGCAGGATGACGCACACATCTTCTGTGCC...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGTCCAGCTGGATGGTTaGACACTGGTGGTAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: PPSTTFSKTWPDQRPIHAVQLDG*TLVVAT Trigger: GGTCGCTACCACCAGTGTGCAACCATCCAGCTGGAC...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGAGGCACTTGGGAGTGTaGCATATGAAGTTTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: NAKTICPEGSRHAVQTGLRHLGV*HMKFPR Trigger: TCTTGGAAACTTCATATGGCACACTCCCAAGTGCCT...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGACTCTTTCAGTAGCTTaGGGTCAGGGAATGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: NAKTICPEGSRHAVQTGLTLSVA*GQGMKC Trigger: GCATTTCATTCCCTGACCCCAAGCTACTGAAAGAGT...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATGGAGTGACGACCTCCTaGAACCCTCTTTTCCTATAT | + |
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Preference number: 2 (lower is better) Translates to: APSIHLALILDPEHWLFHGVTTS*NPLFLY Trigger: ATATAGGAAAAGAGGGTTCCAGGAGGTCGTCACTCC...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAACTCTCGCCAGGACCGTaGCCGGTGATCGAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: SECSERPIETNAKTICPELSPGP*PVIEHQ Trigger: CTGATGTTCGATCACCGGCCACGGTCCTGGCGAGAG...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATAGTATACCTGCTCCATaGCACAGAAGATGTGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: APSIHLALILDPEHWLFHSIPAP*HRRCVR Trigger: ACGCACACATCTTCTGTGCCATGGAGCAGGTATACT...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATAGGCACTTGGGAGTGTaGCATATGAAGTTTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: APSIHLALILDPEHWLFHRHLGV*HMKFPR Trigger: TCTTGGAAACTTCATATGGCACACTCCCAAGTGCCT...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAATCCCAGCAACCACATaGTGGCTCACAAGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: PPSTTFSKTWPDQRPIHAIPATT*WLTSIC Trigger: ACAGATGCTTGTGAGCCACCATGTGGTTGCTGGGAT...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTGCGGATGTTCACCGTGCCACTGGCTTTCTCTTTTTCACCAACAACAAGGAAAGAGAAGTCATTGCTaGACACGCCCCCTTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SCGCSPCHWLSLFHQQQGKRSHC*TRPLLQ Trigger: TTGAAGAAGGGGGCGTGTCCAGCAATGACTTCTCTT...TCCTTGTTGTTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR CAA 90 bp | CGCCCCCTTCTTCAAGGTACATATCATAATAGAAGCCGTTTTCTATaGGTGGGCCGTAACATAGACATCCGCCATAGACTCTCTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: RPLLQGTYHNRSRFL*VGRNIDIRHRLSPW Trigger: CCATGGAGAGAGTCTATGGCGGATGTCTATGTTACGGCCCACCAATAGAAAACGGCTTCTATTATGATATGTACCTTGAAGAAGGGGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGAAAACAGCTCCTCTTTaGTGGAACCATTACAACACA | + |
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Preference number: 2 (lower is better) Translates to: NAKTICPEGSRHAVQTGLKTAPL*WNHYNT Trigger: TGTGTTGTAATGGTTCCATCAAAGAGGAGCTGTTTT...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAAAGTGGGCCAGTGAATaGTCTGAAAGGCCCATAGAA | + |
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Preference number: 2 (lower is better) Translates to: PPSTTFSKTWPDQRPIHAKWASE*SERPIE Trigger: TTCTATGGGCCTTTCAGAGCATTCACTGGCCCACTT...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | TCGTGCGGATGTTCACCGTGCCACTGGCTTTCTCTTTTTCACCAACAACAAGGACTAGAAGTCAGTGGTTaGTTCTGGTTGATTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: SCGCSPCHWLSLFHQQQGLEVSG*FWLISC Trigger: GCATGAAATCAACCAGAAGCAACCACTGACTTCTAG...TCCTTGTTGTTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCGCCATGAATTTAGCATCATGGAATTGTTGCCGTACCTTTTGGGCATAATCCCAGCAACCACATaGTGGCTCACAAGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SVRHEFSIMELLPYLLGIIPATT*WLTSIC Trigger: ACAGATGCTTGTGAGCCACCATGTGGTTGCTGGGAT...TATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | ACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACACACATATAATAAACATAGACTCTCTCCATaGCCTCGCCCATTATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TPSSGVSEDSYSVHTYNKHRLSP*PRPLCG Trigger: CCCACATAATGGGCGAGGCCATGGAGAGAGTCTATG...TTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCGCCATGAATTTAGCATCATGGAATTGTTGCCGTACCTTTTGGGCATAACTAATCCTCGACCCTaGACACTGGCTTTTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: SVRHEFSIMELLPYLLGITNPRP*TLAFPS Trigger: TGATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGT...TATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCCTCGTCCTCAAACTTaGGCAGCTCCAACGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: KLPTEHKECDAFTIQWFLPRPQT*AAPTCN Trigger: ATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGG...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGGAGCGTCTCCATGTCTaGTTTGCCTTCCCAGTACGT | + |
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Preference number: 2 (lower is better) Translates to: KLPTEHKECDAFTIQWFLERLHV*FAFPVR Trigger: ACGTACTGGGAAGGCAAAGCAGACATGGAGACGCTC...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGGGTCAGGGAATGAAATaGCATAGATCCGCTGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: KLPTEHKECDAFTIQWFLGQGMK*HRSAGA Trigger: CGCTCCAGCGGATCTATGGCATTTCATTCCCTGACC...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCGCCATGAATTTAGCATCATGGAATTGTTGCCGTACCTTTTGGGCATAGGCTTAAGTGCAAACTaGTCCTTCTCCACCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SVRHEFSIMELLPYLLGIGLSAN*SFSTSK Trigger: CTTTGAGGTGGAGAAGGAGCAGTTTGCACTTAAGCC...TATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGTTCATGGGCTTAAGTaGAAACTGCTCCTTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SECSERPIETNAKTICPEVHGLK*KLLLLH Trigger: GTGGAGAAGGAGCAGTTTGCACTTAAGCCCATGAAC...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTGCCTCGCCCATTATGTaGGCACTGGAGTGCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTASPIM*ALECQY Trigger: ATACTGGCACTCCAGTGCCCACATAATGGGCGAGGC...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTTGTGCGTCATCCTGCTaGAATCTTCGGACCCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTCASSC*NLRTRV Trigger: CACACGGGTCCGAAGATTCCAGCAGGATGACGCACA...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCGCCATGAATTTAGCATCATGGAATTGTTGCCGTACCTTTTGGGCATAAAAACAGCTCCTCTTTaGTGGAACCATTACAACACA | + |
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Preference number: 2 (lower is better) Translates to: SVRHEFSIMELLPYLLGIKTAPL*WNHYNT Trigger: TGTGTTGTAATGGTTCCATCAAAGAGGAGCTGTTTT...TATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTTCTCCATGTCTGCTTTaGCTTCCCAGTACGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTSPCLL*LPSTWK Trigger: CTTCCACGTACTGGGAAGGCAAAGCAGACATGGAGA...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTCTATACAGTGGTTCCTaGTTTTCTCTAGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTLYSGS*FSLAGW Trigger: CCAGCCAGCTAGAGAAAAGCAGGAACCACTGTATAG...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAAAGAAATATAGTTCTTaGTCCCTCCCGATTTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SECSERPIETNAKTICPEKKYSS*SLPIFL Trigger: CAGGAAAATCGGGAGGGACCAAGAACTATATTTCTT...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTTGTTCACCGTGCCACTaGCTTTCTCTTTTTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTCSPCH*LSLFHQ Trigger: TTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACA...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAATCAATAAACAGACCAGAAAACACTGGCTTCACGGAAATGTCTTAAAGTCTTGCCTTCCCAGTACGTaGAAGAATTCTTGTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: QINKQTRKHWLHGNVLKSCLPST*KNSCVS Trigger: AGATACACAAGAATTCTTCCACGTACTGGGAAGGCA...AGACTTTAAGACATTTCCGTGAAGCCAGTGTTTTCTGGTCTGTTTATTGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTTTTTTGGCTTCCTCTTaGAACTTCTCCCACTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLIELKLPTEHKECDAFTFLASS*NFSHSF Trigger: GAAAGAGTGGGAGAAGTTCCAAGAGGAAGCCAAAAA...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAATCAATAAACAGACCAGAAAACACTGGCTTCACGGAAATGTCTTAAAGTCTACTACTAGAAGTCAGTaGTTGCTTCTGGTTGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QINKQTRKHWLHGNVLKSTTRSQ*LLLVDF Trigger: GAAATCAACCAGAAGCAACCACTGACTTCTAGTAGT...AGACTTTAAGACATTTCCGTGAAGCCAGTGTTTTCTGGTCTGTTTATTGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR CAA 90 bp | GAACATAGAGGAGAAATTAAACGTTATCAGTTCCATTGTATTTTCTaGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: EHRGEIKRYQFHCIF*IELKLPTEHKECDA Trigger: AGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAAAATACAATGGAACTGATAACGTTTAATTTCTCCTCTATGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR TCA 72 bp | AAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTaGCACGGCGCCAGCTCGGGCACAGCGTGTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KPRLLPGVQGLP*HGASSGTACAC Trigger: GCAGGCACACGCTGTGCCCGAGCTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | TCTTCCCTGACACGGCGCCAGCTCGGGCACAGCGTGTaGCTGCTAGAACTCCTCCTCTGCCTGCTTGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: SSLTRRQLGHSV*LLELLLCLLAA Trigger: CGCAGCAAGCAGGCAGAGGAGGAGTTCTAGCAGGCACACGCTGTGCCCGAGCTGGCGCCGTGTCAGGGAAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | AGCCGCCGCACCGTCTCCTCCACTGTCCGCTCTCCGTaGACCTTATTGTCTCTCGTGCGGATGTTCACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRRTVSSTVRSP*TLLSLVRMFTV Trigger: CACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGGAGGAGACGGTGCGGCGGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR TCA 72 bp | GCCAGTATACGGCCTGCGCTTCCTCGTCCTCAAACTTaGGCAGCTCCAACGTGCAATCTGTCTCCAGCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASIRPALPRPQT*AAPTCNLSPAG Trigger: GCCCGCTGGAGACAGATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGAAGCGCAGGCCGTATACTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | CTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTaGAAACCGGTCTGGCGGTGCGGCTTGGTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKPFAQKVPAMQ*KPVWRCGLVVR Trigger: CCTCACCACCAAGCCGCACCGCCAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCATTGCTGCGCGTCTGCTaGAGCTGCTGCAGCCGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PPSTTFSKTWPDQRPIHALLRVC*SCCSRR Trigger: GCGGCGGCTGCAGCAGCTCAAGCAGACGCGCAGCAA...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | CTTCTGTCAGAGCACTGCTCCACAGGGCAGTATACCTaGTCCATGGCACAGAAGATGTGTGCGTCATCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLSEHCSTGQYT*SMAQKMCASSC Trigger: GCAGGATGACGCACACATCTTCTGTGCCATGGAGCAGGTATACTGCCCTGTGGAGCAGTGCTCTGACAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | TATCTCCCTTCACCTGTAACCCTTCTGTCAGAGCACTaGTCCACAGGGCAGTATACCTGCTCCATGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: YLPSPVTLLSEH*STGQYTCSMAQ Trigger: CTGTGCCATGGAGCAGGTATACTGCCCTGTGGAGCAGTGCTCTGACAGAAGGGTTACAGGTGAAGGGAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | CCACTGTCCGCTCTCCGTGGACCTTATTGTCTCTCGTaGGGATGTTCACCGTGCCACTGGCTTTCTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLSALRGPYCLS*GCSPCHWLSLF Trigger: AAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTGTCTGGCGGTGCGGCTaGGTGGTGAGGTGTGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ECSERPIETNAKTICPEGVWRCG*VVRCAC Trigger: GCATGCACACCTCACCACCAAGCCGCACCGCCAGAC...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | CCCACTCTTTCAGTAGCTTGGGGTCAGGGAATGAAATaGCATAGATCCGCTGGAGCGTCTCCATGTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTLSVAWGQGMK*HRSAGASPCLL Trigger: AAGCAGACATGGAGACGCTCCAGCGGATCTATGGCATTTCATTCCCTGACCCCAAGCTACTGAAAGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR TCA 72 bp | ATCTTCAAAGTCTTAATCTTGCCGGTGTGTCGGACATaGGGACCCCGGCAGAGATCTATCAGAGGGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: IFKVLILPVCRT*GPRQRSIRGPH Trigger: ATGTGGCCCTCTGATAGATCTCTGCCGGGGTCCTCATGTCCGACACACCGGCAAGATTAAGACTTTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCATCTCCGTGGACCTTATaGTCTCTCGTGCGGATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PPSTTFSKTWPDQRPIHASPWTL*SLVRMF Trigger: GAACATCCGCACGAGAGACAATAAGGTCCACGGAGA...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | TGCCATAGATCCGCTGGAGCGTCTCCATGTCTGCTTTaGCTTCCCAGTACGTGGAAGAATTCTTGTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: CHRSAGASPCLL*LPSTWKNSCVS Trigger: AGATACACAAGAATTCTTCCACGTACTGGGAAGGCAAAGCAGACATGGAGACGCTCCAGCGGATCTATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | CGTGGACCTTATTGTCTCTCGTGCGGATGTTCACCGTaGCACTGGCTTTCTCTTTTTCACCAACAACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RGPYCLSCGCSP*HWLSLFHQQQG Trigger: TCCTTGTTGTTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | ACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTaGTTTTCTCTAGCTGGCTGGCTCCTCGGCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: TRNVMLLLYSGS*FSLAGWLLGTP Trigger: TGGTGTGCCGAGGAGCCAGCCAGCTAGAGAAAAGCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCTCCTCGTCCTCAAACTaGAGCAGCTCCAACGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCSSSSN*SSSNVQ Trigger: TTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGA...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGTTCAATATCCGGCACTaGAACTTGTTGTACTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NAKTICPEGSRHAVQTGLFNIRH*NLLYLN Trigger: GTTTAAGTACAACAAGTTCAAGTGCCGGATATTGAA...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | TTACTATACAGTGGTTCCTGCTTTTCTCTAGCTGGCTaGCTCCTCGGCACACCAGCTCCTTCAATAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LLYSGSCFSLAG*LLGTPAPSIKC Trigger: ACATTTTATTGAAGGAGCTGGTGTGCCGAGGAGCCAGCCAGCTAGAGAAAAGCAGGAACCACTGTATAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATCGGCACTTGAACTTGTaGTACTTAAACATTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: APSIHLALILDPEHWLFHRHLNL*YLNISS Trigger: ACTAGAAATGTTTAAGTACAACAAGTTCAAGTGCCG...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTCACTCTTTCAGTAGCTaGGGGTCAGGGAATGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: ECSERPIETNAKTICPEGHSFSS*GSGNEM Trigger: CATTTCATTCCCTGACCCCAAGCTACTGAAAGAGTG...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGATCCAGAGCCGGCTATaGAAGATGTTGGGAGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: KLPTEHKECDAFTIQWFLIQSRL*KMLGVT Trigger: CGTCACTCCCAACATCTTCAATAGCCGGCTCTGGAT...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | AGCCGGCTATTGAAGATGTTGGGAGTGACGACCTCCTaGAACCCTCTTTTCCTATATTCACTCCTGATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRLLKMLGVTTS*NPLFLYSLLIN Trigger: ATTTATCAGGAGTGAATATAGGAAAAGAGGGTTCCAGGAGGTCGTCACTCCCAACATCTTCAATAGCCGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | GGATCCAGGTCAGTGTCCGCCATGAATTTAGCATCATaGAATTGTTGCCGTACCTTTTGGGCATATTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSRSVSAMNLAS*NCCRTFWAYSS Trigger: TGATGAATATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACTGACCTGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | TTTTCTTGCACAAAGTTTCCAGGGAAGAGAAGTCATTaGTGGACACGCCCCCTTCTTCAAGGTACATATCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSCTKFPGKRSH*WTRPLLQGTYH Trigger: ATGATATGTACCTTGAAGAAGGGGGCGTGTCCAGCAATGACTTCTCTTCCCTGGAAACTTTGTGCAAGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | CTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTaGCAAGATGGCTCAGCGGTTAAGAGCACTGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKITIKITQEG*QDGSAVKSTDC Trigger: GCAGTCAGTGCTCTTAACCGCTGAGCCATCTTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR CCA 72 bp | TCTTGCACAAAGTTTCCAGGGAAGAGAAGTCATTGCTaGACACGCCCCCTTCTTCAAGGTACATATCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCTKFPGKRSHC*TRPLLQGTYHN Trigger: ATTATGATATGTACCTTGAAGAAGGGGGCGTGTCCAGCAATGACTTCTCTTCCCTGGAAACTTTGTGCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTGTGAGGACAGAGGTCTaGATATCTTTGGTAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ECSERPIETNAKTICPEGVRTEV*ISLVVN Trigger: ATTTACTACCAAAGATATCAAGACCTCTGTCCTCAC...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCGTGAGGACAGAGGTCTaGATATCTTTGGTAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCVRTEV*ISLVVN Trigger: ATTTACTACCAAAGATATCAAGACCTCTGTCCTCAC...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCAATAAACAGACCAGAAAACACTGGCTTCACGGAAATGTCTTAAAGTCTAGTGGTTGCTTCTGGTaGATTTCATGCCTATGGATA | + |
|
Preference number: 3 (lower is better) Translates to: QINKQTRKHWLHGNVLKSSGCFW*ISCLWI Trigger: TATCCATAGGCATGAAATCAACCAGAAGCAACCACT...AGACTTTAAGACATTTCCGTGAAGCCAGTGTTTTCTGGTCTGTTTATTGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| 3UTR GCA 72 bp | TCTTTATTAAGTCCCAGACTACTAGAAGTCAGTGGTTaGTTCTGGTTGATTTCATGCCTATGGATAATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLSPRLLEVSG*FWLISCLWIIK Trigger: CTTGATTATCCATAGGCATGAAATCAACCAGAAGCAACCACTGACTTCTAGTAGTCTGGGACTTAATAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGCCGGTGTGTCGGACATaGGGACCCCGGCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEATLASRCTRSSLTRRQPVCRT*GPRQRS Trigger: AGATCTCTGCCGGGGTCCTCATGTCCGACACACCGG...CTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| 3UTR CAA 72 bp | ACCGTCTCCTCCACTGTCCGCTCTCCGTGGACCTTATaGTCTCTCGTGCGGATGTTCACCGTGCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSSTVRSPWTL*SLVRMFTVPLA Trigger: AGCCAGTGGCACGGTGAACATCCGCACGAGAGACAATAAGGTCCACGGAGAGCGGACAGTGGAGGAGACGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGATGTGTGCGTCATCCTaGTGGAATCTTCGGACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PEATLASRCTRSSLTRRQMCASS*WNLRTR Trigger: ACGGGTCCGAAGATTCCAGCAGGATGACGCACACAT...CTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| 3UTR CAA 72 bp | TGCCAGTATACGGCCTGCGCTTCCTCGTCCTCAAACTaGAGCAGCTCCAACGTGCAATCTGTCTCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQYTACASSSSN*SSSNVQSVSSG Trigger: CCCGCTGGAGACAGATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGAAGCGCAGGCCGTATACTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCTGTGCGTCATCCTGCTaGAATCTTCGGACCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNPVPREKGSGPVNALKGCASSC*NLRTRV Trigger: CACACGGGTCCGAAGATTCCAGCAGGATGACGCACA...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGGTCCAGCTGGATGGTTaGACACTGGTGGTAGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: NAKTICPEGSRHAVQTGLVQLDG*TLVVAT Trigger: GGTCGCTACCACCAGTGTGCAACCATCCAGCTGGAC...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGACTCTTTCAGTAGCTTaGGGTCAGGGAATGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PEATLASRCTRSSLTRRQTLSVA*GQGMKC Trigger: GCATTTCATTCCCTGACCCCAAGCTACTGAAAGAGT...CTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGCTCGGGCATGTTGCCGTACCTTTTaGGCATATTCATCACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HACFPVYKVFPDTAPARACCRTF*AYSSHV Trigger: GACATGTGATGAATATGCCCAAAAGGTACGGCAACA...TGCCCGAGCTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCGGCACAGAAGATGTGTaGGTCATCCTGCTGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CNPVPREKGSGPVNALKGGTEDV*VILLES Trigger: AGATTCCAGCAGGATGACGCACACATCTTCTGTGCC...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGTGCCTTCCCAGTACGTaGAAGAATTCTTGTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEATLASRCTRSSLTRRQCLPST*KNSCVS Trigger: AGATACACAAGAATTCTTCCACGTACTGGGAAGGCA...CTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCCGCGTCTGCTTGAGCTaGTGCAGCCGCCGCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCRVCLS*CSRRTV Trigger: GACGGTGCGGCGGCTGCAGCAGCTCAAGCAGACGCG...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGCCATTATGTGGGCACTaGAGTGCCAGTATACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NAKTICPEGSRHAVQTGLPLCGH*SASIRP Trigger: AGGCCGTATACTGGCACTCCAGTGCCCACATAATGG...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCAAGAGAAGTCATTGCTaGACACGCCCCCTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNPVPREKGSGPVNALKGKRSHC*TRPLLQ Trigger: TTGAAGAAGGGGGCGTGTCCAGCAATGACTTCTCTT...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGCCACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGAAGAAATATAGTTCTTaGTCCCTCCCGATTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEATLASRCTRSSLTRRQKKYSS*SLPIFL Trigger: CAGGAAAATCGGGAGGGACCAAGAACTATATTTCTT...CTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTGGCTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCGGAGTGACGACCTCCTaGAACCCTCTTTTCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: CNPVPREKGSGPVNALKGGVTTS*NPLFLY Trigger: ATATAGGAAAAGAGGGTTCCAGGAGGTCGTCACTCC...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGATTCAAGGTACAGCCTaGATCCAGGTCAGTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAKTICPEGSRHAVQTGLIQGTA*IQVSVR Trigger: GCGGACACTGACCTGGATCCAGGCTGTACCTTGAAT...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATTCTCCATGTCTGCTTTaGCTTCCCAGTACGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APSIHLALILDPEHWLFHSPCLL*LPSTWK Trigger: CTTCCACGTACTGGGAAGGCAAAGCAGACATGGAGA...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCTTTTTGGCTTCCTCTTaGAACTTCTCCCACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNPVPREKGSGPVNALKGFLASS*NFSHSF Trigger: GAAAGAGTGGGAGAAGTTCCAAGAGGAAGCCAAAAA...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTCTCTCGCCAGGACCGTaGCCGGTGATCGAACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECSERPIETNAKTICPEGLSPGP*PVIEHQ Trigger: CTGATGTTCGATCACCGGCCACGGTCCTGGCGAGAG...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTTGCTGCGCGTCTGCTTaGGCTGCTGCAGCCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLIELKLPTEHKECDAFTCCASA*AAAAAA Trigger: TGCGGCGGCTGCAGCAGCTCAAGCAGACGCGCAGCA...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATTGCGGATGTTCACCGTaGCACTGGCTTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APSIHLALILDPEHWLFHCGCSP*HWLSLF Trigger: AAAAAGAGAAAGCCAGTGGCACGGTGAACATCCGCA...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | ACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGACTGCAGAGCCTCGCCCATTATGTaGGCACTGGAGTGCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TTFSKTWPDQRPIHADCRASPIM*ALECQY Trigger: ATACTGGCACTCCAGTGCCCACATAATGGGCGAGGC...TCTGCAGTCTGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGCTGTATGTCAATCTTTaGCCCATAGAAGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NAKTICPEGSRHAVQTGLLYVNL*PIEGSI Trigger: GATGGAGCCTTCTATGGGCCAAAGATTGACATACAG...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | ACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGACTGCAGAGGGAAGAGAAGTCATTaGTGGACACGCCCCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTFSKTWPDQRPIHADCRGKRSH*WTRPLL Trigger: AAGAAGGGGGCGTGTCCAGCAATGACTTCTCTTCCC...TCTGCAGTCTGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | ACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGACTGCAGACCTTATTGTCTCTCGTaGGGATGTTCACCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTFSKTWPDQRPIHADCRPYCLS*GCSPCH Trigger: GTGGCACGGTGAACATCCGCACGAGAGACAATAAGG...TCTGCAGTCTGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR TCA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTCCTCGTCCTCAAACTTaGGCAGCTCCAACGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ECSERPIETNAKTICPEGPRPQT*AAPTCN Trigger: ATTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGG...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGATGTGGGCACTGGAGTaGCAGTATACGGCCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEHKECDAFTIQWFLMWALE*QYTACA Trigger: AGCGCAGGCCGTATACTGGCACTCCAGTGCCCACAT...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAACCACCGACCCCAGGATaGCTCTGTGAACAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SECSERPIETNAKTICPEPPTPG*LCEQSL Trigger: CAGTGATTGTTCACAGAGCCATCCTGGGGTCGGTGG...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR TCA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAACCCAGGATGGCTCTGTaGACAATCACTGGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SECSERPIETNAKTICPEPRMAL*TITGLF Trigger: GAAAAGGCCAGTGATTGTTCACAGAGCCATCCTGGG...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCACTTTGCTCTTCTTCTTaGCTCCTTCTTTCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSTTFSKTWPDQRPIHALCSSS*LLLSAS Trigger: AGAAGCGGAAAGAAGGAGGCAAGAAGAAGAGCAAAG...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCACTTGCTATCTTTTGCTaGCTTTTCGGCCAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSTTFSKTWPDQRPIHALAIFC*LFGQDR Trigger: TCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAG...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTCGGCTTGCTATCTTTTaGTGCCTTTTCGGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECSERPIETNAKTICPEGRLAIF*CLFGQD Trigger: ATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCG...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR GCA 90 bp | ACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACACACATATAATAAAGGTCAGGGAATGAAATaGCATAGATCCGCTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPSSGVSEDSYSVHTYNKGQGMK*HRSAGA Trigger: CGCTCCAGCGGATCTATGGCATTTCATTCCCTGACC...TTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAACTAGAACTCCTCCTCTaGCTGCTTGCTGCGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HHRWLLKITIKITQEGWQLELLL*LLAARL Trigger: CAGACGCGCAGCAAGCAGGCAGAGGAGGAGTTCTAG...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGTCCAAGGAATTTTTCTaGGCGAGTAGAAAGATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NAKTICPEGSRHAVQTGLSKEFF*ASRKIQ Trigger: TTGAATCTTTCTACTCGCCCAGAAAAATTCCTTGGA...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGGTGGTAGCGACCGATaGCATCTTTTATCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSTTFSKTWPDQRPIHAGGSDR*HLLSVC Trigger: ACATACAGATAAAAGATGCCATCGGTCGCTACCACC...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTACATGTCGGTCCCACTaGGACCACCATCACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLIELKLPTEHKECDAFTTCRSH*DHHHLA Trigger: CGCCAGGTGATGGTGGTCCCAGTGGGACCGACATGT...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAATCTGTAGACAGTCGTaGTCGGAGTATTCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSTTFSKTWPDQRPIHAICRQS*SEYSLS Trigger: AGAAAGTGAATACTCCGACCACGACTGTCTACAGAT...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS-3UTR CCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCCTCCCGATTTTCCTGTaGTCTCGGTTTTTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCLPIFL*SRFLAS Trigger: GGAAGCCAAAAACCGAGACCACAGGAAAATCGGGAG...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTGGGACCACCATCACCTaGCGAGGAGAGAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLIELKLPTEHKECDAFTGTTIT*RGESQK Trigger: TTTCTGGCTCTCTCCTCGCCAGGTGATGGTGGTCCC...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCGCCATGAATTTAGCATCATGGAATTGTTGCCGTACCTTTTGGGCATACTTTGCTCTTCTTCTTaGCTCCTTCTTTCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVRHEFSIMELLPYLLGILCSSS*LLLSAS Trigger: AGAAGCGGAAAGAAGGAGGCAAGAAGAAGAGCAAAG...TATGCCCAAAAGGTACGGCAACAATTCCATGATGCTAAATTCATGGCGGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR GCA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAAGAGCGTCTCCATGTCTaGTTTGCCTTCCCAGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: HHRWLLKITIKITQEGWQERLHV*FAFPVR Trigger: ACGTACTGGGAAGGCAAAGCAGACATGGAGACGCTC...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCGTTCATGGGCTTAAGTaGAAACTGCTCCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCVHGLK*KLLLLH Trigger: GTGGAGAAGGAGCAGTTTGCACTTAAGCCCATGAAC...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCAATCTGATACGGCGTaGTTTTCCAGGACTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEHKECDAFTIQWFLQSDTA*FSRTPH Trigger: ATGCGGAGTCCTGGAAAACCACGCCGTATCAGATTG...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CCA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAACATAGACTCTCTCCATaGCCTCGCCCATTATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHRWLLKITIKITQEGWQHRLSP*PRPLCG Trigger: CCCACATAATGGGCGAGGCCATGGAGAGAGTCTATG...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAAACTGTCCGCTCTCCGTaGACCTTATTGTCTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHRWLLKITIKITQEGWQTVRSP*TLLSLV Trigger: CACGAGAGACAATAAGGTCCACGGAGAGCGGACAGT...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| 3UTR CAA 72 bp | ATTTTCTTGCACAAAGTTTCCAGGGAAGAGAAGTCATaGCTGGACACGCCCCCTTCTTCAAGGTACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLHKVSREEKS*LDTPPSSRYIS Trigger: TGATATGTACCTTGAAGAAGGGGGCGTGTCCAGCAATGACTTCTCTTCCCTGGAAACTTTGTGCAAGAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR TCA 90 bp | ACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCAGACTGCAGACACCAACAACAAGGATaGAGTTATACTGTGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: TTFSKTWPDQRPIHADCRHQQQG*SYTVLT Trigger: AGTTAGCACAGTATAACTTCATCCTTGTTGTTGGTG...TCTGCAGTCTGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGGGCTTAAGTGCAAACTaGTCCTTCTCCACCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEHKECDAFTIQWFLGLSAN*SFSTSK Trigger: CTTTGAGGTGGAGAAGGAGCAGTTTGCACTTAAGCC...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTGCATCATGGAATTGTTaGCGTACCTTTTGGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ECSERPIETNAKTICPEGASWNC*RTFWAY Trigger: ATATGCCCAAAAGGTACGGCAACAATTCCATGATGC...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| 3UTR CAA 72 bp | CTTCAAGGTACATATCATAATAGAAGCCGTTTTCTATaGGTGGGCCGTAACATAGACATCCGCCATAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LQGTYHNRSRFL*VGRNIDIRHRL Trigger: GAGTCTATGGCGGATGTCTATGTTACGGCCCACCAATAGAAAACGGCTTCTATTATGATATGTACCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR CCA 90 bp | CAAATCAATAAACAGACCAGAAAACACTGGCTTCACGGAAATGTCTTAAAGTCTCAATCTGATACGGCGTaGTTTTCCAGGACTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QINKQTRKHWLHGNVLKSQSDTA*FSRTPH Trigger: ATGCGGAGTCCTGGAAAACCACGCCGTATCAGATTG...AGACTTTAAGACATTTCCGTGAAGCCAGTGTTTTCTGGTCTGTTTATTGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCTCTGTGAACAATCACTaGCCTTTTCTTATCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCSVNNH*PFLIIA Trigger: GGCGATGATAAGAAAAGGCCAGTGATTGTTCACAGA...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CCA 90 bp | AAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGTGTTCACCGTGCCACTaGCTTTCTCTTTTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEHKECDAFTIQWFLCSPCH*LSLFHQ Trigger: TTGGTGAAAAAGAGAAAGCCAGTGGCACGGTGAACA...CAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCATTTCATCTTCAATCTaGTCCATGGCACAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCISSSI*SMAQKM Trigger: CATCTTCTGTGCCATGGAGCAGATTGAAGATGAAAT...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR GCA 90 bp | CAAATCAATAAACAGACCAGAAAACACTGGCTTCACGGAAATGTCTTAAAGTCTCTTGCTATCTTTTGCTaGCTTTTCGGCCAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QINKQTRKHWLHGNVLKSLAIFC*LFGQDR Trigger: TCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAG...AGACTTTAAGACATTTCCGTGAAGCCAGTGTTTTCTGGTCTGTTTATTGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CCA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAAAAATGTAGGCTCCTTTaGGCAGGAAAAAGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHRWLLKITIKITQEGWQKCRLL*AGKSNF Trigger: GAAGTTGCTTTTTCCTGCCCAAAGGAGCCTACATTT...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| 3UTR CAA 72 bp | GACCAGCGCTTCTATATAACCGTGAGGACAGAGGTCTaGATATCTTTGGTAGTAAATTTTATTTTAACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQRFYITVRTEV*ISLVVNFILTP Trigger: TGGCGTTAAAATAAAATTTACTACCAAAGATATCAAGACCTCTGTCCTCACGGTTATATAGAAGCGCTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| 3UTR CAA 72 bp | GGAGAAATTAAACGTTATCAGTTCCATTGTATTTTCTaGATAGAGCTAAAACTACCAACAGAGCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEIKRYQFHCIF*IELKLPTEHKE Trigger: TTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAAAATACAATGGAACTGATAACGTTTAATTTCTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| CDS-3UTR CAA 90 bp | CACGCTTGCTTCCCGGTGTACAAGGTCTTCCCTGACACGGCGCCAGCTCGGGCATTGCTGCGCGTCTGCTaGAGCTGCTGCAGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HACFPVYKVFPDTAPARALLRVC*SCCSRR Trigger: GCGGCGGCTGCAGCAGCTCAAGCAGACGCGCAGCAA...TGCCCGAGCTGGCGCCGTGTCAGGGAAGACCTTGTACACCGGGAAGCAAGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS-3UTR CAA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCAGTCCAGCTGGATGGTaGCACACTGGTGGTAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: CNPVPREKGSGPVNALKGSPAGW*HTGGSD Trigger: GTCGCTACCACCAGTGTGCAACCATCCAGCTGGACT...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | CGGTTATCTCCCTTCACCTGTAACCCTTCTGTCAGAGCACTGCTCCACAGGGCATCGGCTTGCTATCTTTaGCTGCCTTTTCGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSPFTCNPSVRALLHRASACYL*LPFRPG Trigger: TCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGA...TGCCCTGTGGAGCAGTGCTCTGACAGAAGGGTTACAGGTGAAGGGAGATAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATGTCTCCATGTCTGCTTaGCCTTCCCAGTACGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: APSIHLALILDPEHWLFHVSMSA*PSQYVE Trigger: TTCCACGTACTGGGAAGGCAAAGCAGACATGGAGAC...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCTCTGTATGTCAATCTTaGGCCCATAGAAGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CNPVPREKGSGPVNALKGSVCQS*AHRRLH Trigger: ATGGAGCCTTCTATGGGCCAAAGATTGACATACAGA...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | GCGCCTAGCATTCATCTGGCACTAATCCTCGACCCTGAACACTGGCTTTTCCATTCTCCGTGGACCTTATaGTCTCTCGTGCGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: APSIHLALILDPEHWLFHSPWTL*SLVRMF Trigger: GAACATCCGCACGAGAGACAATAAGGTCCACGGAGA...ATGGAAAAGCCAGTGTTCAGGGTCGAGGATTAGTGCCAGATGAATGCTAGGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | AACGCTAAAACCATTTGCCCAGAAGGTTCCCGCCATGCAGTGCAAACCGGTCTGCACTCTTTCAGTAGCTaGGGGTCAGGGAATGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NAKTICPEGSRHAVQTGLHSFSS*GSGNEM Trigger: CATTTCATTCCCTGACCCCAAGCTACTGAAAGAGTG...CAGACCGGTTTGCACTGCATGGCGGGAACCTTCTGGGCAAATGGTTTTAGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCATCTACAACATTCTCTAAGACTTGGCCAGATCAAAGGCCGATTCATGCATCCTCGTCCTCAAACTaGAGCAGCTCCAACGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPSTTFSKTWPDQRPIHASSSSN*SSSNVQ Trigger: TTGCACGTTGGAGCTGCTCAAGTTTGAGGACGAGGA...TGCATGAATCGGCCTTTGATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS GCA 90 bp | CTGCTTGCCGTCAGGCAGGGTGACTTTAATCGGCTTGCTATCTTTTaGTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLAVRQGDFNRLAIF*CLFGQDRIVFCFEF Trigger: AAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCACCCTGCCTGACGGCAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | TGTAACCCGGTCCCCCGTGAAAAGGGAAGTGGGCCAGTGAATGCTCTGAAAGGCGAATCGTGTTCTGCTTaGAGTTTGTTGTACATATCA | + |
|
Preference number: 5 (lower is better) Translates to: CNPVPREKGSGPVNALKGESCSA*SLLYIS Trigger: TGATATGTACAACAAACTCAAAGCAGAACACGATTC...GCCTTTCAGAGCATTCACTGGCCCACTTCCCTTTTCACGGGGGACCGGGTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS GCA 90 bp | CTTGCCGTCAGGCAGGGTGACTTTAATCGGCTTGCTATCTTTTGCTaGCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVRQGDFNRLAIFC*LFGQDRIVFCFEFV Trigger: AACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCACCCTGCCTGACGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAATCGGCTTGCTATCTTTaGCTGCCTTTTCGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SECSERPIETNAKTICPESACYL*LPFRPG Trigger: TCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGA...TTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCTCTCCACCTCCATCTTaGCTCTTCTTCTTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCSPPPS*LFFLPP Trigger: AGGAGGCAAGAAGAAGAGCAAAGATGGAGGTGGAGA...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTGATAGAGCTAAAACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATCCAGAGCCGGCTATaGAAGATGTTGGGAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: FLIELKLPTEHKECDAFTIQSRL*KMLGVT Trigger: CGTCACTCCCAACATCTTCAATAGCCGGCTCTGGAT...AGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTTTTAGCTCTATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS-3UTR CAA 90 bp | ACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACACACATATAATAAAGTGACTTTAATCGGCTaGCTATCTTTTGCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPSSGVSEDSYSVHTYNKVTLIG*LSFAAF Trigger: AAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCAC...TTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS GCA 90 bp | CTTGCTATCTTTTGCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTaGTTTGAGTTTGTTGTACATATCAAGGCGTGTGTTAATGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LAIFCCLFGQDRIVF*FEFVVHIKACVNVF Trigger: GAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCTCTGAAAGGCCCATAGAAACAAACGCTAAAACCATTTGCCCAGAAGGTGAATCGTGTTCTGCTTaGAGTTTGTTGTACATATCA | + |
|
Preference number: 5 (lower is better) Translates to: ECSERPIETNAKTICPEGESCSA*SLLYIS Trigger: TGATATGTACAACAAACTCAAAGCAGAACACGATTC...ACCTTCTGGGCAAATGGTTTTAGCGTTTGTTTCTATGGGCCTTTCAGAGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS-3UTR CAA 90 bp | ACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACACACATATAATAAACAAACTGTTTTCAAGTaGTTTCTCAGCTTGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPSSGVSEDSYSVHTYNKQTVFK*FLSLVP Trigger: TGGAACCAAGCTGAGAAACAACTTGAAAACAGTTTG...TTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS-3UTR CAA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAAGTGACTTTAATCGGCTaGCTATCTTTTGCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HHRWLLKITIKITQEGWQVTLIG*LSFAAF Trigger: AAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCAC...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| CDS-3UTR CAA 90 bp | AACTACCAACAGAGCACAAGGAATGTGATGCTTTTACTATACAGTGGTTCCTGCTTCAATATCCGGCACTaGAACTTGTTGTACTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NYQQSTRNVMLLLYSGSCFNIRH*NLLYLN Trigger: GTTTAAGTACAACAAGTTCAAGTGCCGGATATTGAA...GCAGGAACCACTGTATAGTAAAAGCATCACATTCCTTGTGCTCTGTTGGTAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS-3UTR CAA 90 bp | CATCATCGTTGGCTTCTGAAAATAACTATAAAAATCACACAAGAGGGCTGGCAACGGCACTTGAACTTGTaGTACTTAAACATTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HHRWLLKITIKITQEGWQRHLNL*YLNISS Trigger: ACTAGAAATGTTTAAGTACAACAAGTTCAAGTGCCG...TTGCCAGCCCTCTTGTGTGATTTTTATAGTTATTTTCAGAAGCCAACGATGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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| CDS CAA 72 bp | TACGGCGTGGTTTTCCAGGACTCCGCATCCACCTGCTaGCCGTCAGGCAGGGTGACTTTAATCGGCTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: YGVVFQDSASTC*PSGRVTLIGLL Trigger: TAGCAAGCCGATTAAAGTCACCCTGCCTGACGGCAAGCAGGTGGATGCGGAGTCCTGGAAAACCACGCCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| CDS CAA 72 bp | TCTGTCTCCAGCGGGCGGTCCAGGTCCCAAACGACTTaGTTCACCTTAGCAACAACGGTGTTGTCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSSGRSRSQTT*FTLATTVLSAR Trigger: CCTGGCTGACAACACCGTTGTTGCTAAGGTGAACAAAGTCGTTTGGGACCTGGACCGCCCGCTGGAGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
||
| CDS TCA 72 bp | GGTGTTGTCAGCCAGGCCCTAATTCCACAAGCAATCTaGTACGGCGTGGTTTTCCAGGACTCCGCATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GVVSQALIPQAI*YGVVFQDSAST Trigger: GGTGGATGCGGAGTCCTGGAAAACCACGCCGTATCAGATTGCTTGTGGAATTAGGGCCTGGCTGACAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228814.2 |
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| CDS CAA 90 bp | TCCGCATCCACCTGCTTGCCGTCAGGCAGGGTGACTTTAATCGGCTaGCTATCTTTTGCTGCCTTTTCGGCCAGGATAGAATCGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SASTCLPSGRVTLIG*LSFAAFSARIESCS Trigger: AGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCACCCTGCCTGACGGCAAGCAGGTGGATGCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| CDS GCA 72 bp | GTCAGGCAGGGTGACTTTAATCGGCTTGCTATCTTTTaGTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRQGDFNRLAIF*CLFGQDRIVFC Trigger: GCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCACCCTGCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS GCA 72 bp | AGGCAGGGTGACTTTAATCGGCTTGCTATCTTTTGCTaGCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RQGDFNRLAIFC*LFGQDRIVFCF Trigger: AAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAGCAAGCCGATTAAAGTCACCCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
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| CDS CAA 90 bp | GCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTTGTaGTACATATCAAGGCGTGTGTTAATGTATTCAGGCCAGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: AAFSARIESCSALSL*YISRRVLMYSGQGF Trigger: GAATCCCTGGCCTGAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 90 bp | TTTGCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTaGTTGTACATATCAAGGCGTGTGTTAATGTATTCAGGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FAAFSARIESCSALS*LYISRRVLMYSGQG Trigger: TCCCTGGCCTGAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 72 bp | GCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTaGAGTTTGTTGTACATATCAAGGCGTGTGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: AAFSARIESCSA*SLLYISRRVLM Trigger: CATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS GCA 72 bp | TTTTGCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTaGTTTGAGTTTGTTGTACATATCAAGGCGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FCCLFGQDRIVF*FEFVVHIKACV Trigger: AACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 72 bp | TCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTTGTaGTACATATCAAGGCGTGTGTTAATGTATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SARIESCSALSL*YISRRVLMYSG Trigger: GCCTGAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 90 bp | CTATCTTTTGCTGCCTTTTCGGCCAGGATAGAATCGTGTTCTGCTTaGAGTTTGTTGTACATATCAAGGCGTGTGTTAATGTATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSFAAFSARIESCSA*SLLYISRRVLMYSG Trigger: GCCTGAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAAGGCAGCAAAAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 72 bp | TTTTCGGCCAGGATAGAATCGTGTTCTGCTTTGAGTTaGTTGTACATATCAAGGCGTGTGTTAATGTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSARIESCSALS*LYISRRVLMYS Trigger: TGAATACATTAACACACGCCTTGATATGTACAACAAACTCAAAGCAGAACACGATTCTATCCTGGCCGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022849.7 ENSMUST00000228814.2 |
||
| CDS CAA 72 bp | ACACTATATACTGTGCGAAGAAAATCCAAACAACCTTaGATTTCATCTTCAATCTGCTCCATGGCACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLYTVRRKSKQP*ISSSICSMAQK Trigger: CTTCTGTGCCATGGAGCAGATTGAAGATGAAATCAAAGGTTGTTTGGATTTTCTTCGCACAGTATATAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022849.7 |
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