Pregenerated sensors for TARM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053338Ensembl transcript IDs: ENSMUST00000065703.9, ENSMUST00000203020.3, ENSMUST00000203821.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTCTTAAAGGCGTGTaGCACCACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATG | + |
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Preference number: 1 (lower is better) Translates to: QKSACLCLPSALKGV*HHTRLAPVSYHYPM Trigger: CATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTGGTGGCACACGCCTTTAAGAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| 3UTR GCA 90 bp | TTCAATCCATCATGGCACAGTGGAGGTCATAGTAGTGGGTACAGATaGTGGAGGCTTTTCACATCAAGCAGGGAGCTTGGGATGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: FNPSWHSGGHSSGYR*WRLFTSSRELGMEQ Trigger: TTGTTCCATCCCAAGCTCCCTGCTTGATGTGAAAAGCCTCCAGCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATGGATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR CCA 90 bp | AGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTaGATGATTCCCAAAGTGCTGCATCAATTTCACATAAATTCACAG | + |
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Preference number: 1 (lower is better) Translates to: RPLFCVKSQDEAACL*MIPKVLHQFHINSQ Trigger: CTGTGAATTTATGTGAAATTGATGCAGCACTTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR-3UTR TCA 90 bp | ACATCAAGCAGGGAGCTTGGGATGGAACAAGAAGCAGAGCCCATCTTAAGTTTCCTGGTAGTGGGCTGGTaGGATGGCTCAGTGGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: TSSRELGMEQEAEPILSFLVVGW*DGSVVK Trigger: CTTAACCACTGAGCCATCTCACCAGCCCACTACCAG...GAAACTTAAGATGGGCTCTGCTTCTTGTTCCATCCCAAGCTCCCTGCTTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGTTAAGAGCTGCTCTGGCAAAGGTTCTGTGTTCAATTTTTAGCCACCACTGTGAAGAGTCAGGATaGGGCAGCCTGTCTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: QWLRAALAKVLCSIFSHHCEESG*GSLSLD Trigger: ATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACA...GTGGTGGCTAAAAATTGAACACAGAACCTTTGCCAGAGCAGCTCTTAACCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR TCA 72 bp | TATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATaGGGCAGCCTGTCTCTGGATGATTCCCAAAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: YVQASVLCEESG*GSLSLDDSQSA Trigger: AGCACTTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR CCA 72 bp | CAGATGCTGGAGGCTTTTCACATCAAGCAGGGAGCTTaGGATGGAACAAGAAGCAGAGCCCATCTTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: QMLEAFHIKQGA*DGTRSRAHLKF Trigger: AAACTTAAGATGGGCTCTGCTTCTTGTTCCATCCCAAGCTCCCTGCTTGATGTGAAAAGCCTCCAGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR GCA 72 bp | GGTTTCAGAGACGGCTCAGCAGTTAAAAGCACCAACTaGTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAA | + |
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Preference number: 3 (lower is better) Translates to: GFRDGSAVKSTN*SSKGPKFKSQQ Trigger: TTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCAGTTGGTGCTTTTAACTGCTGAGCCGTCTCTGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| 3UTR CCA 72 bp | TTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTaGATGATTCCCAAAGTGCTGCATCAATTTCACATA | + |
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Preference number: 3 (lower is better) Translates to: FCVKSQDEAACL*MIPKVLHQFHI Trigger: TATGTGAAATTGATGCAGCACTTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| 3UTR CCA 72 bp | GACATTTTTATTTGTGTTCACAGTTTCAATCCATCATaGCACAGTGGAGGTCATAGTAGTGGGTACAGATGC | + |
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Preference number: 3 (lower is better) Translates to: DIFICVHSFNPS*HSGGHSSGYRC Trigger: GCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATGGATTGAAACTGTGAACACAAATAAAAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCGACAGCCGCTCACTGTaGCAGGCTTCAACCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLFCVKSQDEAACLWMIPDSRSL*QASTRK Trigger: CTTCCTGGTTGAAGCCTGGCACAGTGAGCGGCTGTC...GGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCAGTCACCTTGCTTCCTaGAGTCACTGTACCCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: PLFCVKSQDEAACLWMIPSHLAS*SHCTPV Trigger: CACCGGGGTACAGTGACTGCAGGAAGCAAGGTGACT...GGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCGAGGTTGCTGTCAGTTaGGGTGGGAAAGTCGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PLFCVKSQDEAACLWMIPEVAVS*GGKVEA Trigger: TGCCTCGACTTTCCCACCGCAACTGACAGCAACCTC...GGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR TCA 90 bp | CAGTGGTTAAGAGCTGCTCTGGCAAAGGTTCTGTGTTCAATTTTTAGCCACCACGGCATTGCTGGGGTGTaGCGGTGTGTCATGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QWLRAALAKVLCSIFSHHGIAGV*RCVMGP Trigger: TGGCCCCATGACACACCGTCACACCCCAGCAATGCC...GTGGTGGCTAAAAATTGAACACAGAACCTTTGCCAGAGCAGCTCTTAACCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR TCA 90 bp | CACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCGGCATTGCTGGGGTGTaGCGGTGTGTCATGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HTRLAPVSYHYPMVKRIFGIAGV*RCVMGP Trigger: TGGCCCCATGACACACCGTCACACCCCAGCAATGCC...GAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | TGTCCAGATATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCCCTGCTTTCTGGCACTaGAAAGTCACCTTGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CPDMSRPLFCVKSQDEAAPAFWH*KVTLLP Trigger: AGGAAGCAAGGTGACTTTGCAGTGCCAGAAAGCAGG...GGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATATCTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | CAGTGGTTAAGAGCTGCTCTGGCAAAGGTTCTGTGTTCAATTTTTAGCCACCACTCACGTGGCTCTTGGTaGGAAGCACTGTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QWLRAALAKVLCSIFSHHSRGSW*EALCWA Trigger: GGCCCAGCACAGTGCTTCCCACCAAGAGCCACGTGA...GTGGTGGCTAAAAATTGAACACAGAACCTTTGCCAGAGCAGCTCTTAACCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | GTCGTGTGTGTGTGTGTGTGTGTGTATGTGTCCAGATATGTCCAGGCCTCTGTTTTGTCACGTGGCTCTTaGTGGGAAGCACTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VVCVCVCVYVSRYVQASVLSRGS*WEALCW Trigger: CCAGCACAGTGCTTCCCACCAAGAGCCACGTGACAA...AACAGAGGCCTGGACATATCTGGACACATACACACACACACACACACACACGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | TGTCCAGATATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCATTCCCCCGAGTCTCTaGCTGTCACATTCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CPDMSRPLFCVKSQDEAAIPPSL*LSHSEE Trigger: CTCTTCAGAATGTGACAGCCAGAGACTCGGGGGAAT...GGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATATCTGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | ACCAACTGCTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAACCACATGGTGGCAGTCACCTTGCTTCCTaGAGTCACTGTACCCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TNCSSKGPKFKSQQPHGGSHLAS*SHCTPV Trigger: CACCGGGGTACAGTGACTGCAGGAAGCAAGGTGACT...GCCACCATGTGGTTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | TGTCCAGATATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCACTGCAAAGTCACCTTaGTTCCTGCAGTCACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: CPDMSRPLFCVKSQDEAATAKSP*FLQSLY Trigger: GTACAGTGACTGCAGGAAGCAAGGTGACTTTGCAGT...GGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATATCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | GTCGTGTGTGTGTGTGTGTGTGTGTATGTGTCCAGATATGTCCAGGCCTCTGTTGTTGAGCTCCTTGTCTaGACAGGAGTTGAGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VVCVCVCVYVSRYVQASVVELLV*TGVECP Trigger: GGGACACTCAACTCCTGTGCAGACAAGGAGCTCAAC...AACAGAGGCCTGGACATATCTGGACACATACACACACACACACACACACACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | TTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGGAGACTCACGTGGCTCTTGGTaGGAAGCACTGTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLSLPYGEKNLPVCLCGDSRGSW*EALCWA Trigger: GGCCCAGCACAGTGCTTCCCACCAAGAGCCACGTGA...GTCTCCACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR TCA 90 bp | GGTACAGATGCTGGAGGCTTTTCACATCAAGCAGGGAGCTTGGGATGGAACAAGGAGGTAAGTACCCTGTaGCCAACAAGAAAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GTDAGGFSHQAGSLGWNKEVSTL*PTRKGH Trigger: ATGCCCTTTTCTTGTTGGTCACAGGGTACTTACCTC...CTTGTTCCATCCCAAGCTCCCTGCTTGATGTGAAAAGCCTCCAGCATCTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | CACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCGAGGTTGCTGTCAGTTaGGGTGGGAAAGTCGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HTRLAPVSYHYPMVKRIFEVAVS*GGKVEA Trigger: TGCCTCGACTTTCCCACCGCAACTGACAGCAACCTC...GAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CCA 90 bp | CTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCAAACATTGCATTGTCACGTaGCTCTTGGTGGGAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: LFCVKSQDEAACLWMIPKHCIVT*LLVGST Trigger: AGTGCTTCCCACCAAGAGCCACGTGACAATGCAATG...TTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | CTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCAAAACACTGCCTGCTTTCTaGCACTGCAAAGTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFCVKSQDEAACLWMIPKTLPAF*HCKVTL Trigger: CAAGGTGACTTTGCAGTGCCAGAAAGCAGGCAGTGT...TTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR TCA 90 bp | CATCATGGCACAGTGGAGGTCATAGTAGTGGGTACAGATGCTGGAGGCTTTTCACTGGCTGTCACATTCTaGAGAGAGAAGTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: HHGTVEVIVVGTDAGGFSLAVTF*REKSDT Trigger: GGTATCAGACTTCTCTCTTCAGAATGTGACAGCCAG...TGAAAAGCCTCCAGCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | CATCATGGCACAGTGGAGGTCATAGTAGTGGGTACAGATGCTGGAGGCTTTTCACCGATAGGGAGCCTTTaGCTGATAGTAAACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HHGTVEVIVVGTDAGGFSPIGSL*LIVNTA Trigger: AGCTGTGTTTACTATCAGGCAAAGGCTCCCTATCGG...TGAAAAGCCTCCAGCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | TCAAGCAGGGAGCTTGGGATGGAACAAGAAGCAGAGCCCATCTTAAGTTTCATTGGCACAGGGTTTATTTaGAGACAGCCGCTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSRELGMEQEAEPILSFIGTGFI*RQPLTV Trigger: CACAGTGAGCGGCTGTCTCCAAATAAACCCTGTGCC...AATGAAACTTAAGATGGGCTCTGCTTCTTGTTCCATCCCAAGCTCCCTGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR TCA 90 bp | TCAAGCAGGGAGCTTGGGATGGAACAAGAAGCAGAGCCCATCTTAAGTTTCATTGAGGCAGCAAGATCTTaGGGCAGATGGTTGTCTATC | + |
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Preference number: 4 (lower is better) Translates to: SSRELGMEQEAEPILSFIEAARS*GRWLSI Trigger: GATAGACAACCATCTGCCTCAAGATCTTGCTGCCTC...AATGAAACTTAAGATGGGCTCTGCTTCTTGTTCCATCCCAAGCTCCCTGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | TATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGGAGACACTTATGACTCTACTTTGTCACGTGGCTCTTaGTGGGAAGCACTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YGEKNLPVCLCGDTYDSTLSRGS*WEALCW Trigger: CCAGCACAGTGCTTCCCACCAAGAGCCACGTGACAA...AGTAGAGTCATAAGTGTCTCCACACAGGCACACAGGAAGATTCTTTTCACCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CCA 90 bp | CACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCACACTGCCTGCTTTCTaGCACTGCAAAGTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: HTRLAPVSYHYPMVKRIFTLPAF*HCKVTL Trigger: CAAGGTGACTTTGCAGTGCCAGAAAGCAGGCAGTGT...GAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR TCA 90 bp | CACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGGCTGTCACATTCTaGAGAGAGAAGTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: HTRLAPVSYHYPMVKRIFLAVTF*REKSDT Trigger: GGTATCAGACTTCTCTCTTCAGAATGTGACAGCCAG...GAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR TCA 90 bp | CTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCGAGGCAGCAAGATCTTaGGGCAGATGGTTGTCTATC | + |
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Preference number: 4 (lower is better) Translates to: LAPVSYHYPMVKRIFLCAEAARS*GRWLSI Trigger: GATAGACAACCATCTGCCTCAAGATCTTGCTGCCTC...GGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | CCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGCCTGCTTTCTGGCACTaGAAAGTCACCTTGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PVSYHYPMVKRIFLCACVPAFWH*KVTLLP Trigger: AGGAAGCAAGGTGACTTTGCAGTGCCAGAAAGCAGG...CACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | TATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGGAGACACTTATGACTCTACTGTTGAGCTCCTTGTCTaGACAGGAGTTGAGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: YGEKNLPVCLCGDTYDSTVELLV*TGVECP Trigger: GGGACACTCAACTCCTGTGCAGACAAGGAGCTCAAC...AGTAGAGTCATAAGTGTCTCCACACAGGCACACAGGAAGATTCTTTTCACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | CTAAATTGGACAATTAAGATTTGTCATAAAATGGGGTTTCAGAGACGGCTCAGCGACAGCCGCTCACTGTaGCAGGCTTCAACCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LNWTIKICHKMGFQRRLSDSRSL*QASTRK Trigger: CTTCCTGGTTGAAGCCTGGCACAGTGAGCGGCTGTC...GCTGAGCCGTCTCTGAAACCCCATTTTATGACAAATCTTAATTGTCCAATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CCA 90 bp | TTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGGAGACATTCCCCCGAGTCTCTaGCTGTCACATTCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: FLSLPYGEKNLPVCLCGDIPPSL*LSHSEE Trigger: CTCTTCAGAATGTGACAGCCAGAGACTCGGGGGAAT...GTCTCCACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR TCA 90 bp | TCTAATGCTCTCTTATGTCTGATTCCCTCTCCAGTCATGCATGCATACGTGTGTTCTGTCGTAGGTCGGTaGAATGAAAATCAGCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SNALLCLIPSPVMHAYVCSVVGR*NENQPS Trigger: AGACGGCTGATTTTCATTTCACCGACCTACGACAGA...ACACACGTATGCATGCATGACTGGAGAGGGAATCAGACATAAGAGAGCATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR GCA 90 bp | ACCAACTGCTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAACCACATGGTGGCTGTCATGGGGCCATTTaGTATAGTATTCACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TNCSSKGPKFKSQQPHGGCHGAI*YSIHRC Trigger: ACACCTGTGAATACTATAGCAAATGGCCCCATGACA...GCCACCATGTGGTTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCAGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | CCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGCCGATAGGGAGCCTTTaGCTGATAGTAAACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PVSYHYPMVKRIFLCACVPIGSL*LIVNTA Trigger: AGCTGTGTTTACTATCAGGCAAAGGCTCCCTATCGG...CACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CCA 90 bp | GGTACAGATGCTGGAGGCTTTTCACATCAAGCAGGGAGCTTGGGATGGAACAAGCTCTGTCAAATTATATaGCTTCACAGAATTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GTDAGGFSHQAGSLGWNKLCQII*LHRIQS Trigger: GCTTTGAATTCTGTGAAGCCATATAATTTGACAGAG...CTTGTTCCATCCCAAGCTCCCTGCTTGATGTGAAAAGCCTCCAGCATCTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CCA 90 bp | TATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGGAGACACTTATGACTCTACTTTACCAGGGTTTATTTaGAGACAGCCGCTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: YGEKNLPVCLCGDTYDSTLPGFI*RQPLTV Trigger: CACAGTGAGCGGCTGTCTCCAAATAAACCCTGGTAA...AGTAGAGTCATAAGTGTCTCCACACAGGCACACAGGAAGATTCTTTTCACCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR GCA 90 bp | GGGGGACATTTTTATTTGTGTTCACAGTTTCAATCCATCATGGCACAGTGGAGGTGTCATGGGGCCATTTaGTATAGTATTCACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GGHFYLCSQFQSIMAQWRCHGAI*YSIHRC Trigger: ACACCTGTGAATACTATAGCAAATGGCCCCATGACA...CCTCCACTGTGCCATGATGGATTGAAACTGTGAACACAAATAAAAATGTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR TCA 90 bp | CTAAATTGGACAATTAAGATTTGTCATAAAATGGGGTTTCAGAGACGGCTCAGCTCTGTCGTAGGTCGGTaGAATGAAAATCAGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNWTIKICHKMGFQRRLSSVVGR*NENQPS Trigger: AGACGGCTGATTTTCATTTCACCGACCTACGACAGA...GCTGAGCCGTCTCTGAAACCCCATTTTATGACAAATCTTAATTGTCCAATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CCA 90 bp | TGCTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAACCACATGGTGGCTCACAACTCTGTCAAATTATATaGCTTCACAGAATTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSSKGPKFKSQQPHGGSQLCQII*LHRIQS Trigger: GCTTTGAATTCTGTGAAGCCATATAATTTGACAGAG...TTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCGGGTCTTGGGTGAGGTaGCTGTCAGTTGCGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLFCVKSQDEAACLWMIPGSWVR*LSVAVG Trigger: TCCCACCGCAACTGACAGCAACCTCACCCAAGACCC...GGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS CCA 90 bp | TTCAGTAACGCAAACTTTACGGGTCCGAGGACACTGCCTGCTTTCTaGCACTGCAAAGTCACCTTGCTTCCTGCAGTCACTGTACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FSNANFTGPRTLPAF*HCKVTLLPAVTVPR Trigger: CCGGGGTACAGTGACTGCAGGAAGCAAGGTGACTTTGCAGTGCCAGAAAGCAGGCAGTGTCCTCGGACCCGTAAAGTTTGCGTTACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTGTCTCTGGATGATTCCCAAAGAGATCTCAAGGAGATaGCTGGGCCCTGAGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LFCVKSQDEAACLWMIPKEISRR*LGPEAR Trigger: TCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTC...TTTGGGAATCATCCAGAGACAGGCTGCCTCATCCTGACTCTTCACACAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS GCA 90 bp | AGTGTCCCACCTTCAGTAACGCAAACTTTACGGGTCCGAGGACACTaGCTGCTTTCTGGCACTGCAAAGTCACCTTGCTTCCTGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPPSVTQTLRVRGH*LLSGTAKSPCFLQS Trigger: TGACTGCAGGAAGCAAGGTGACTTTGCAGTGCCAGAAAGCAGGCAGTGTCCTCGGACCCGTAAAGTTTGCGTTACTGAAGGTGGGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CATCATGGCACAGTGGAGGTCATAGTAGTGGGTACAGATGCTGGAGGCTTTTCACCACTATTAGCAGGATaGCAGCAGCCACACCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: HHGTVEVIVVGTDAGGFSPLLAG*QQPHRP Trigger: GGGTCGGTGTGGCTGCTGCAATCCTGCTAATAGTGG...TGAAAAGCCTCCAGCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CAA 90 bp | TGTCCAGATATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCTTCAGGAATGTCTGTTaGCCCAACACACAGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPDMSRPLFCVKSQDEAAFRNVC*PNTQPE Trigger: CTCCGGCTGTGTGTTGGGCAAACAGACATTCCTGAA...GGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATATCTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
||
| CDS-3UTR CAA 90 bp | CATCATGGCACAGTGGAGGTCATAGTAGTGGGTACAGATGCTGGAGGCTTTTCAGCACTGAGGCTGGGCTaGGGAGGAGACCCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HHGTVEVIVVGTDAGGFSALRLG*GGDPFS Trigger: TGAAAATGGGTCTCCTCCCAAGCCCAGCCTCAGTGC...TGAAAAGCCTCCAGCATCTGTACCCACTACTATGACCTCCACTGTGCCATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS CCA 90 bp | CTTGAGGCAGATGGTTGTCTATCACAGAGATCTCAAGGAGATTGCTaGGCCCTGAGGCCCGATAGGGAGCCTTTGCCTGATAGTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LEADGCLSQRSQGDC*ALRPDREPLPDSKH Trigger: GTGTTTACTATCAGGCAAAGGCTCCCTATCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTCTGTGATAGACAACCATCTGCCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
||
| CDS-3UTR CAA 90 bp | TGTCCAGATATGTCCAGGCCTCTGTTCTGTGTGAAGAGTCAGGATGAGGCAGCCCACTGCAAAGTCACCTaGCTTCCTGCAGTCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CPDMSRPLFCVKSQDEAAHCKVT*LPAVTV Trigger: TACAGTGACTGCAGGAAGCAAGGTGACTTTGCAGTG...GGCTGCCTCATCCTGACTCTTCACACAGAACAGAGGCCTGGACATATCTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
||
| CDS-3UTR CAA 90 bp | CACACCCGGCTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCGGGTCTTGGGTGAGGTaGCTGTCAGTTGCGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HTRLAPVSYHYPMVKRIFGSWVR*LSVAVG Trigger: TCCCACCGCAACTGACAGCAACCTCACCCAAGACCC...GAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAGCCGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
||
| CDS TCA 90 bp | CAGATGGTTGTCTATCACAGAGATCTCAAGGAGATTGCTGGGCCCTaGGGCCCGATAGGGAGCCTTTGCCTGATAGTAAACACAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QMVVYHRDLKEIAGP*GPIGSLCLIVNTAV Trigger: TACAGCTGTGTTTACTATCAGGCAAAGGCTCCCTATCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTCTGTGATAGACAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS TCA 90 bp | GAGGTTGCTGTCAGTTGCGGTGGGAAAGTCGAGGCAGCAAGATCTTaGGGCAGATGGTTGTCTATCACAGAGATCTCAAGGAGATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAVSCGGKVEAARS*GRWLSITEISRRLL Trigger: CAGCAATCTCCTTGAGATCTCTGTGATAGACAACCATCTGCCTCAAGATCTTGCTGCCTCGACTTTCCCACCGCAACTGACAGCAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CACTTTGTAGACCAGGCTGGACTCGAACTGAACTCAGAAATCTGCCTGCCTCTGTTGTCTGCACAGGAGTaGAGTGTCCCACCTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HFVDQAGLELNSEICLPLLSAQE*SVPPSV Trigger: TACTGAAGGTGGGACACTCAACTCCTGTGCAGACAA...CAGAGGCAGGCAGATTTCTGAGTTCAGTTCGAGTCCAGCCTGGTCTACAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | TGCTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAACCACATGGTGGCTCACAACCACTATTAGCAGGATaGCAGCAGCCACACCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSKGPKFKSQQPHGGSQPLLAG*QQPHRP Trigger: GGGTCGGTGTGGCTGCTGCAATCCTGCTAATAGTGG...TTGTGAGCCACCATGTGGTTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
||
| CDS-3UTR CAA 90 bp | CTAGCTCCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCGCACTGAGGCTGGGCTaGGGAGGAGACCCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAPVSYHYPMVKRIFLCAALRLG*GGDPFS Trigger: TGAAAATGGGTCTCCTCCCAAGCCCAGCCTCAGTGC...GGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | TCAAGCAGGGAGCTTGGGATGGAACAAGAAGCAGAGCCCATCTTAAGTTTCATTAACAAGAAAAGGGCATaGCTGGGGTGTGACGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRELGMEQEAEPILSFINKKRA*LGCDGV Trigger: CACACCGTCACACCCCAGCAATGCCCTTTTCTTGTT...AATGAAACTTAAGATGGGCTCTGCTTCTTGTTCCATCCCAAGCTCCCTGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CAA 90 bp | ACCAACTGCTCTTCCAAAGGTCCTAAGTTCAAATCCCAACAACCACATGGTGGCCGAGGCAGCAAGATCTaGAGGCAGATGGTTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TNCSSKGPKFKSQQPHGGRGSKI*RQMVVY Trigger: ATAGACAACCATCTGCCTCAAGATCTTGCTGCCTCG...GCCACCATGTGGTTGTTGGGATTTGAACTTAGGACCTTTGGAAGAGCAGTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS CCA 90 bp | GAGCCTTTGCCTGATAGTAAACACAGCTGTATTCCCCCGAGTCTCTaGCTGTCACATTCTGAAGAGAGAAGTCTGATACCATTCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLPDSKHSCIPPSL*LSHSEERSLIPFLL Trigger: CAACAGGAATGGTATCAGACTTCTCTCTTCAGAATGTGACAGCCAGAGACTCGGGGGAATACAGCTGTGTTTACTATCAGGCAAAGGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGAACAAGAAAAGGGCATaGCTGGGGTGTGACGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSYHYPMVKRIFLCACVNKKRA*LGCDGV Trigger: CACACCGTCACACCCCAGCAATGCCCTTTTCTTGTT...CACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | AATTGGACAATTAAGATTTGTCATAAAATGGGGTTTCAGAGACGGCTCAGCAGTGAGATCTCAAGGAGATaGCTGGGCCCTGAGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NWTIKICHKMGFQRRLSSEISRR*LGPEAR Trigger: TCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTC...ACTGCTGAGCCGTCTCTGAAACCCCATTTTATGACAAATCTTAATTGTCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CCTGTTTCTTATCACTACCCTATGGTGAAAAGAATCTTCCTGTGTGCCTGTGTGTTCAGGAATGTCTGTTaGCCCAACACACAGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVSYHYPMVKRIFLCACVFRNVC*PNTQPE Trigger: CTCCGGCTGTGTGTTGGGCAAACAGACATTCCTGAA...CACACAGGCACACAGGAAGATTCTTTTCACCATAGGGTAGTGATAAGAAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | GGGGGACATTTTTATTTGTGTTCACAGTTTCAATCCATCATGGCACAGTGGAGGTTGTCTGCACAGGAGTaGAGTGTCCCACCTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGHFYLCSQFQSIMAQWRLSAQE*SVPPSV Trigger: TACTGAAGGTGGGACACTCAACTCCTGTGCAGACAA...CCTCCACTGTGCCATGATGGATTGAAACTGTGAACACAAATAAAAATGTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CAA 90 bp | TCTAATGCTCTCTTATGTCTGATTCCCTCTCCAGTCATGCATGCATACGTGTGTCGAGGCAGCAAGATCTaGAGGCAGATGGTTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SNALLCLIPSPVMHAYVCRGSKI*RQMVVY Trigger: ATAGACAACCATCTGCCTCAAGATCTTGCTGCCTCG...ACACACGTATGCATGCATGACTGGAGAGGGAATCAGACATAAGAGAGCATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS TCA 90 bp | AGTATTCACAGGTGTAGTGTCCGCCATCATTCTGTCGTAGGTCGGTaGAATGAAAATCAGCCGTCTCCTCTGTCAAATTATATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIHRCSVRHHSVVGR*NENQPSPLSNYMAS Trigger: TGAAGCCATATAATTTGACAGAGGAGACGGCTGATTTTCATTTCACCGACCTACGACAGAATGATGGCGGACACTACACCTGTGAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS-3UTR CAA 90 bp | CAGTGGTTAAGAGCTGCTCTGGCAAAGGTTCTGTGTTCAATTTTTAGCCACCACGCGAAACCTTCCTTTTaGAGGATGAAGTATTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: QWLRAALAKVLCSIFSHHAKPSF*RMKYLL Trigger: GAGTAAATACTTCATCCTCAAAAAGGAAGGTTTCGC...GTGGTGGCTAAAAATTGAACACAGAACCTTTGCCAGAGCAGCTCTTAACCACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203020.3 |
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| CDS-3UTR CAA 90 bp | CTAAATTGGACAATTAAGATTTGTCATAAAATGGGGTTTCAGAGACGGCTCAGCGCGAAACCTTCCTTTTaGAGGATGAAGTATTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LNWTIKICHKMGFQRRLSAKPSF*RMKYLL Trigger: GAGTAAATACTTCATCCTCAAAAAGGAAGGTTTCGC...GCTGAGCCGTCTCTGAAACCCCATTTTATGACAAATCTTAATTGTCCAATTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203821.3 |
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| CDS CAA 90 bp | ACTGAGGCTGGGCTTGGGAGGAGACCCATTTTCAGGAATGTCTGTTaGCCCAACACACAGCCGGAGGCAGAGAAGGGAAAGGAGCCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TEAGLGRRPIFRNVC*PNTQPEAEKGKEPR Trigger: TCTAGGCTCCTTTCCCTTCTCTGCCTCCGGCTGTGTGTTGGGCAAACAGACATTCCTGAAAATGGGTCTCCTCCCAAGCCCAGCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS GCA 72 bp | GCAGATGGTTGTCTATCACAGAGATCTCAAGGAGATTaGTGGGCCCTGAGGCCCGATAGGGAGCCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ADGCLSQRSQGD*WALRPDREPLP Trigger: AGGCAAAGGCTCCCTATCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTCTGTGATAGACAACCATCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS GCA 72 bp | GGCTTGGGAGGAGACCCATTTTCAGGAATGTCTGTTTaGCCAACACACAGCCGGAGGCAGAGAAGGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGGDPFSGMSV*PTHSRRQRRER Trigger: CCTTTCCCTTCTCTGCCTCCGGCTGTGTGTTGGGCAAACAGACATTCCTGAAAATGGGTCTCCTCCCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 72 bp | GGGCTTGGGAGGAGACCCATTTTCAGGAATGTCTGTTaGCCCAACACACAGCCGGAGGCAGAGAAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLGRRPIFRNVC*PNTQPEAEKGK Trigger: CTTTCCCTTCTCTGCCTCCGGCTGTGTGTTGGGCAAACAGACATTCCTGAAAATGGGTCTCCTCCCAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CCA 72 bp | GCAAACTTTACGGGTCCGAGGACACTGCCTGCTTTCTaGCACTGCAAAGTCACCTTGCTTCCTGCAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ANFTGPRTLPAF*HCKVTLLPAVT Trigger: AGTGACTGCAGGAAGCAAGGTGACTTTGCAGTGCCAGAAAGCAGGCAGTGTCCTCGGACCCGTAAAGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CCA 72 bp | GATGGTTGTCTATCACAGAGATCTCAAGGAGATTGCTaGGCCCTGAGGCCCGATAGGGAGCCTTTGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGCLSQRSQGDC*ALRPDREPLPD Trigger: ATCAGGCAAAGGCTCCCTATCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTCTGTGATAGACAACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS TCA 72 bp | GTCTATCACAGAGATCTCAAGGAGATTGCTGGGCCCTaGGGCCCGATAGGGAGCCTTTGCCTGATAGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VYHRDLKEIAGP*GPIGSLCLIVN Trigger: GTTTACTATCAGGCAAAGGCTCCCTATCGGGCCTCAGGGCCCAGCAATCTCCTTGAGATCTCTGTGATAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS TCA 72 bp | GTCAGTTGCGGTGGGAAAGTCGAGGCAGCAAGATCTTaGGGCAGATGGTTGTCTATCACAGAGATCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSCGGKVEAARS*GRWLSITEISR Trigger: CCTTGAGATCTCTGTGATAGACAACCATCTGCCTCAAGATCTTGCTGCCTCGACTTTCCCACCGCAACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS GCA 72 bp | AGGATGAAGTATTTACTCGGGGTGGGGCTCTTACATTaGATTGTCACGTGGCTCTTGGTGGGAAGCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RMKYLLGVGLLH*IVTWLLVGSTV Trigger: CACAGTGCTTCCCACCAAGAGCCACGTGACAATGCAATGTAAGAGCCCCACCCCGAGTAAATACTTCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS GCA 72 bp | CATTGCTGGGGTGTGACGGTGTGTCATGGGGCCATTTaGTATAGTATTCACAGGTGTAGTGTCCGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCWGVTVCHGAI*YSIHRCSVRHH Trigger: ATGATGGCGGACACTACACCTGTGAATACTATAGCAAATGGCCCCATGACACACCGTCACACCCCAGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 72 bp | GAGGATGAAGTATTTACTCGGGGTGGGGCTCTTACATaGCATTGTCACGTGGCTCTTGGTGGGAAGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: EDEVFTRGGALT*HCHVALGGKHC Trigger: ACAGTGCTTCCCACCAAGAGCCACGTGACAATGCAATGTAAGAGCCCCACCCCGAGTAAATACTTCATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 90 bp | AGAAGTCTGATACCATTCCTGTTGAGCTCCTTGTCTGCACAGGAGTaGAGTGTCCCACCTTCAGTAACGCAAACTTTACGGGTCCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSLIPFLLSSLSAQE*SVPPSVTQTLRVRG Trigger: TCCTCGGACCCGTAAAGTTTGCGTTACTGAAGGTGGGACACTCAACTCCTGTGCAGACAAGGAGCTCAACAGGAATGGTATCAGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
||
| CDS TCA 72 bp | CTATTAGCAGGATTGCAGCAGCCACACCGACCCGGATaGGATTATCCACAGTGTAGCCTTCTGTCATTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLAGLQQPHRPG*DYPQCSLLSLY Trigger: GTACAATGACAGAAGGCTACACTGTGGATAATCTCATCCGGGTCGGTGTGGCTGCTGCAATCCTGCTAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS GCA 72 bp | GAGAAGTCTGATACCATTCCTGTTGAGCTCCTTGTCTaGACAGGAGTTGAGTGTCCCACCTTCAGTAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: EKSDTIPVELLV*TGVECPTFSNA Trigger: TGCGTTACTGAAGGTGGGACACTCAACTCCTGTGCAGACAAGGAGCTCAACAGGAATGGTATCAGACTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 90 bp | CTCTGGCTGTCACATTCTGAAGAGAGAAGTCTGATACCATTCCTGTaGAGCTCCTTGTCTGCACAGGAGTTGAGTGTCCCACCTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LWLSHSEERSLIPFL*SSLSAQELSVPPSV Trigger: TACTGAAGGTGGGACACTCAACTCCTGTGCAGACAAGGAGCTCAACAGGAATGGTATCAGACTTCTCTCTTCAGAATGTGACAGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 72 bp | ATACCATTCCTGTTGAGCTCCTTGTCTGCACAGGAGTaGAGTGTCCCACCTTCAGTAACGCAAACTTTACGG | + |
|
Preference number: 6 (lower is better) Translates to: IPFLLSSLSAQE*SVPPSVTQTLR Trigger: CCGTAAAGTTTGCGTTACTGAAGGTGGGACACTCAACTCCTGTGCAGACAAGGAGCTCAACAGGAATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
||
| CDS CCA 72 bp | CCTGATAGTAAACACAGCTGTATTCCCCCGAGTCTCTaGCTGTCACATTCTGAAGAGAGAAGTCTGATACCA | + |
|
Preference number: 6 (lower is better) Translates to: PDSKHSCIPPSL*LSHSEERSLIP Trigger: TGGTATCAGACTTCTCTCTTCAGAATGTGACAGCCAGAGACTCGGGGGAATACAGCTGTGTTTACTATCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CAA 72 bp | TCACATTCTGAAGAGAGAAGTCTGATACCATTCCTGTaGAGCTCCTTGTCTGCACAGGAGTTGAGTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SHSEERSLIPFL*SSLSAQELSVP Trigger: TGGGACACTCAACTCCTGTGCAGACAAGGAGCTCAACAGGAATGGTATCAGACTTCTCTCTTCAGAATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS TCA 72 bp | AGGTGTAGTGTCCGCCATCATTCTGTCGTAGGTCGGTaGAATGAAAATCAGCCGTCTCCTCTGTCAAATTAT | + |
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Preference number: 6 (lower is better) Translates to: RCSVRHHSVVGR*NENQPSPLSNY Trigger: ATAATTTGACAGAGGAGACGGCTGATTTTCATTTCACCGACCTACGACAGAATGATGGCGGACACTACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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| CDS CCA 72 bp | GAAATGAAAATCAGCCGTCTCCTCTGTCAAATTATATaGCTTCACAGAATTCAAAGCGAAACCTTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EMKISRLLCQII*LHRIQSETFLF Trigger: AAAAAGGAAGGTTTCGCTTTGAATTCTGTGAAGCCATATAATTTGACAGAGGAGACGGCTGATTTTCATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065703.9 ENSMUST00000203020.3 ENSMUST00000203821.3 |
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