Pregenerated sensors for TARDBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041459Ensembl transcript IDs: ENSMUST00000045180.14, ENSMUST00000084125.10, ENSMUST00000105702.9, ENSMUST00000165113.8, ENSMUST00000172073.8, ENSMUST00000186729.7, ENSMUST00000188134.7, ENSMUST00000188488.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTaGCTTTCCTTGGCAAGTCTTGTTGCTGGGTCAAACTACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: HYRRTHSWRAACKAW*LSLASLVAGSNYSS Trigger: GCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTATAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | CAGCCGCTCATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTaGACATCCGAATGGGCATCCTCAAAAGGCTCTCACCTCATTACA | + |
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Preference number: 1 (lower is better) Translates to: QPLMLYMRKEWQRPP*TSEWASSKGSHLIT Trigger: TGTAATGAGGTGAGAGCCTTTTGAGGATGCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATGAGCGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CCA 90 bp | CTAGATAATGAGACACAGCGATGGTTTGTGGGAGGAATAGTTTCCTaGGGTTCCATTAATTGTGGGGCGGCAGACCAGTATGGGGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: LDNETQRWFVGGIVS*GSINCGAADQYGVY Trigger: GTAGACCCCATACTGGTCTGCCGCCCCACAATTAATGGAACCCCAGGAAACTATTCCTCCCACAAACCATCGCTGTGTCTCATTATCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CCA 90 bp | GGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCAAGTCTTGTTGCTaGGTCAAACTACAGCAGCAGCAGGTGCACTTATACATGACAATT | + |
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Preference number: 1 (lower is better) Translates to: GSLQSLVTFLGKSCC*VKLQQQQVHLYMTI Trigger: AATTGTCATGTATAAGTGCACCTGCTGCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR GCA 90 bp | AATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTaGATCCTTAATGAGAACAGACTTCACTGGAACTGTGGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: NQRKHHACLPTAKRS*ILNENRLHWNCGWL Trigger: CAGCCAGCCACAGTTCCAGTGAAGTCTGTTCTCATTAAGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CCA 90 bp | GCTGCATCCTTAATGAGAACAGACTTCACTGGAACTGTGGCTGGCTaGGGGTTAACCCAGAAGGGGCTTCTTGCTAGAAACCTAATGTTT | + |
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Preference number: 1 (lower is better) Translates to: AASLMRTDFTGTVAG*GLTQKGLLARNLMF Trigger: AAACATTAGGTTTCTAGCAAGAAGCCCCTTCTGGGTTAACCCCCAGCCAGCCACAGTTCCAGTGAAGTCTGTTCTCATTAAGGATGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CCA 90 bp | CTGGGTCAAACTACAGCAGCAGCAGGTGCACTTATACATGACAATTaGGTCCTAACAGCCGCTCATGCTGTATATGAGAAAAGAATGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LGQTTAAAGALIHDN*VLTAAHAVYEKRMA Trigger: TGCCATTCTTTTCTCATATACAGCATGAGCGGCTGTTAGGACCCAATTGTCATGTATAAGTGCACCTGCTGCTGCTGTAGTTTGACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | GGTCTTAATGAGCTCAGAAAGTGCTCTTACTTTCTGAGTAACTTCTaGGTGGTTCCAGAATACCTTTTGGAAGGTAAGCGGAAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: GLNELRKCSYFLSNF*VVPEYLLEGKRKAG Trigger: ACCTGCTTTCCGCTTACCTTCCAAAAGGTATTCTGGAACCACTCAGAAGTTACTCAGAAAGTAAGAGCACTTTCTGAGCTCATTAAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | GCAGGTGAGATTGTTACAGGTCCAAACACTTGCCAATATCAGCTTTaGTTTGTGTTTAACAGTGCTTGGCCAACCCCCAACACAGAAAAA | + |
|
Preference number: 1 (lower is better) Translates to: AGEIVTGPNTCQYQL*FVFNSAWPTPNTEK Trigger: TTTTTCTGTGTTGGGGGTTGGCCAAGCACTGTTAAACACAAATCAAAGCTGATATTGGCAAGTGTTTGGACCTGTAACAATCTCACCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR GCA 90 bp | AAACTCAAGAACAAAGTCACAATCAACGGAAGCATCATGCCTGTTTaGCTACCGCGAAAAGAAGCTGCATCCTTAATGAGAACAGACTTC | + |
|
Preference number: 1 (lower is better) Translates to: KLKNKVTINGSIMPV*LPRKEAASLMRTDF Trigger: GAAGTCTGTTCTCATTAAGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGTGACTTTGTTCTTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | TTAATCAAAGTGCACAACCACAATAAAGAACATGTGTTGCATTCCTaGGCCCTCAGTTTGCAAAGAACGGTAAAAGTGTTTGGAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LIKVHNHNKEHVLHS*ALSLQRTVKVFGGL Trigger: GAGCCCTCCAAACACTTTTACCGTTCTTTGCAAACTGAGGGCTCAGGAATGCAACACATGTTCTTTATTGTGGTTGTGCACTTTGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | AAGCATGGGCCACCACACCCACCTGGAGACTCAAATTTTAAAGGATaGAAATGCTATATTGCATCTTCCCACATAAGTCACCTTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: KHGPPHPPGDSNFKG*KCYIASSHISHLNF Trigger: AAAGTTAAGGTGACTTATGTGGGAAGATGCAATATAGCATTTTCATCCTTTAAAATTTGAGTCTCCAGGTGGGTGTGGTGGCCCATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | TGTGTAGATTTGGTCTTAATGAGCTCAGAAAGTGCTCTTACTTTCTaGGTAACTTCTGAGTGGTTCCAGAATACCTTTTGGAAGGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: CVDLVLMSSESALTF*VTSEWFQNTFWKVS Trigger: GCTTACCTTCCAAAAGGTATTCTGGAACCACTCAGAAGTTACTCAGAAAGTAAGAGCACTTTCTGAGCTCATTAAGACCAAATCTACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | ACTTTTCAAATCCCAAACAGAAAGGTGCTTAACCTTCTTTCCCATTaGTATGCTCTGCTACAAAGCATTAGAAATCAACTCTTTTGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: TFQIPNRKVLNLLSH*YALLQSIRNQLFCP Trigger: AGGGCAAAAGAGTTGATTTCTAATGCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTTAAGCACCTTTCTGTTTGGGATTTGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR GCA 90 bp | TCCCTATTGCAATTAATTCCACTTTTCAAATCCCAAACAGAAAGGTaGTTAACCTTCTTTCCCATTGATATGCTCTGCTACAAAGCATTA | + |
|
Preference number: 1 (lower is better) Translates to: SLLQLIPLFKSQTER*LTFFPIDMLCYKAL Trigger: TAATGCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTTAAGCACCTTTCTGTTTGGGATTTGAAAAGTGGAATTAATTGCAATAGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR TCA 90 bp | ATTCAACTGTGGTTCAAAGAGTTGTTCTTCATTATTTCTAAGGAATaGACGCGTTTTGATGACCAGACTTTCAAAACCAAATCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: IQLWFKELFFIISKE*TRFDDQTFKTKSLP Trigger: TGGCAAAGATTTGGTTTTGAAAGTCTGGTCATCAAAACGCGTTCATTCCTTAGAAATAATGAAGAACAACTCTTTGAACCACAGTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTGCACACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAATTACCCCAGGACTCCTaGCCGTCTTTGGAGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSCTQVLSRLPHAVLFQQLPQDS*PSLEVP Trigger: GGGGACCTCCAAAGACGGCCAGGAGTCCTGGGGTAA...TTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGTGTGCAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGTGCTGGCTTAGAGACTaGTGGCAAGGACAGCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWCWLRD*WQGQLQ Trigger: CTGCAGCTGTCCTTGCCACCAGTCTCTAAGCCAGCA...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAGAGCCCCAGGACTCCTaGCCGTCTTTGGAGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AGKYVCEADGFWTSSKGEEPQDS*PSLEVP Trigger: GGGGACCTCCAAAGACGGCCAGGAGTCCTGGGGCTC...TTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186729.7 ENSMUST00000188134.7 |
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| 3UTR CAA 90 bp | GGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCAAGTCTTGTaGCTGGGTCAAACTACAGCAGCAGCAGGTGCACTTATACATGAC | + |
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Preference number: 2 (lower is better) Translates to: GGQPAKPGDFPWQVL*LGQTTAAAGALIHD Trigger: GTCATGTATAAGTGCACCTGCTGCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGAGGAATTCTTAGGTGAGCGTTaGGCTCAGGGAAGTCAACCG | + |
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Preference number: 2 (lower is better) Translates to: MGILKRLSPHYTQAWPEEFLGER*AQGSQP Trigger: CGGTTGACTTCCCTGAGCCCAACGCTCACCTAAGAA...TTCCTCGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CAA 90 bp | GTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCAAGTCTaGTTGCTGGGTCAAACTACAGCAGCAGCAGGTGCACTTATACAT | + |
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Preference number: 2 (lower is better) Translates to: VGGQPAKPGDFPWQV*LLGQTTAAAGALIH Trigger: ATGTATAAGTGCACCTGCTGCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCGCTCATGCTGTATATaGGAAAAGAATGGCAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWRSCCI*EKNGSV Trigger: GACGCTGCCATTCTTTTCTCATATACAGCATGAGCG...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGGGCTGTTTCCATTTCTaGCCAACAAAGGGCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWGCFHF*PTKGLL Trigger: CAACAAGCCCTTTGTTGGCCAGAAATGGAAACAGCC...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGAATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGTCAAAACCATGCCATTaGCAAGTAACTTACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SEWASSKGSHLITLKPGPSKPCH*QVTYPR Trigger: CCTGGGGTAAGTTACTTGTCAATGGCATGGTTTTGA...CGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCATTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGAGGTGCACTTATACATaGCAATTGGGTCCTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWRCTYT*QLGPNS Trigger: GCTGTTAGGACCCAATTGTCATGTATAAGTGCACCT...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTGCACACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAGGCGGCAGACCAGTATaGGGTCTACACAAAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SSCTQVLSRLPHAVLFQQGGRPV*GLHKSH Trigger: ATGACTTTTGTGTAGACCCCATACTGGTCTGCCGCC...TTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGTGTGCAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGAGGGTTTGGAAATCATaGAGGGTTAGATGCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWRVWKS*RVRCRE Trigger: TTCTCTGCATCTAACCCTGCATGATTTCCAAACCCT...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCTTATACATGACAATTaGGTCCTAACAGCCGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWLIHDN*VLTAAH Trigger: ATGAGCGGCTGTTAGGACCCAATTGTCATGTATAAG...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCGGACATACCAATTGCTaGCCACCAAAAATGTACCGC | + |
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Preference number: 2 (lower is better) Translates to: HAVYEKRMAASSLNIRMGGHTNC*PPKMYR Trigger: GCGGTACATTTTTGGTGGTCAGCAATTGGTATGTCC...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAAACAATCTCTGTTCTTAGGTGAGCGTTaGGCTCAGGGAAGTCAACCG | + |
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Preference number: 2 (lower is better) Translates to: TSPVQTPSCCSLSAKQSLFLGER*AQGSQP Trigger: CGGTTGACTTCCCTGAGCCCAACGCTCACCTAAGAA...CAGAGATTGTTTTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCTCAAAACCATGCCATTaGCAAGTAACTTACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASSKPCH*QVTYPR Trigger: CCTGGGGTAAGTTACTTGTCAATGGCATGGTTTTGA...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTGCACACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAAGTGCTCTTACTTTCTaGGTAACTTCTGAGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSCTQVLSRLPHAVLFQQSALTF*VTSEWF Trigger: GAACCACTCAGAAGTTACTCAGAAAGTAAGAGCACT...TTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGTGTGCAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGTGTATTTCAGGCACATaGTTTCTTGGTTTCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWCISGT*FLGFFY Trigger: GTAGAAGAAACCAAGAAACCATGTGCCTGAAATACA...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCAGAATTCCCAGAGAGCCCAAAAAGAGAAAAACAAGCAGCTCAGGGTGTGGCGGCAGACCAGTATaGGGTCTACACAAAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: FPRIPREPKKRKTSSSGCGGRPV*GLHKSH Trigger: ATGACTTTTGTGTAGACCCCATACTGGTCTGCCGCC...ACACCCTGAGCTGCTTGTTTTTCTCTTTTTGGGCTCTCTGGGAATTCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAAGGCTGATCAACACTaGAAGACTTCTATGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASKADQH*KTSMTS Trigger: ACTGGTCATAGAAGTCTTTCAGTGTTGATCAGCCTT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAGGACATACCAATTGCTaGCCACCAAAAATGTACCGC | + |
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Preference number: 2 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPGHTNC*PPKMYR Trigger: GCGGTACATTTTTGGTGGTCAGCAATTGGTATGTCC...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR GCA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCACTTGGCAAGTCTTGTTaGTGGGTCAAACTACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPLGKSC*WVKLQQ Trigger: CTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAG...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAGGCACATGGTTTCTTaGTTTCTTCTACTTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASRHMVS*FLLLHP Trigger: GGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGACACTAAACTGTTGGTaGCAAGAAAACCTTTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWTLNCW*QENLLF Trigger: GAATAAAAGGTTTTCTTGCCACCAACAGTTTAGTGT...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAGATGGGGAAATAGCTaGCCTACAACTCATTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASRWGNS*PTTHLH Trigger: GTGTAAATGAGTTGTAGGCCAGCTATTTCCCCATCT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCCTGCACACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAACTACTTATTTTATACTaGCTGTTTCCATTTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSCTQVLSRLPHAVLFQQLLILY*LFPFLA Trigger: GGCCAGAAATGGAAACAGCCAGTATAAAATAAGTAG...TTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGTGTGCAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCTGCCAAGAAACTTTATaGAAGTTCCATCTCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASCQETL*KFHLKR Trigger: CCTTTTGAGATGGAACTTTCATAAAGTTTCTTGGCA...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATCAAATGCACAGAGGCACTCAGAACAAGCCAGAGGGTAACTGCTTACCAAACCTTCTTTCCCATTaGTATGCTCTGCTACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ENQMHRGTQNKPEGNCLPNLLSH*YALLQS Trigger: GCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTT...TGGTAAGCAGTTACCCTCTGGCTTGTTCTGAGTGCCTCTGTGCATTTGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAACATGTTAAAAGGCTaGTCAACACTGAAAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASNMLKG*STLKDF Trigger: GAAGTCTTTCAGTGTTGATCAGCCTTTTAACATGTT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCAACAGTAAGTTATCCTaGAATAAACTGCTCTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HAVYEKRMAASSLNIRMGNSKLS*NKLLFC Trigger: GCAGAAGAGCAGTTTATTTCAGGATAACTTACTGTT...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCCAAACAGTGCTAAAATaGAAAATTCAGATGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: HAVYEKRMAASSLNIRMGQTVLK*KIQMHR Trigger: CCTGTGCATCTGAATTTTGCATTTTAGCACTGTTTG...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCAATGAGCTCAGAAAGTaGTCTTACTTTCTGAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: HAVYEKRMAASSLNIRMGNELRK*SYFLSN Trigger: GTTACTCAGAAAGTAAGAGCACTTTCTGAGCTCATT...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAATGAGCTCAGAAAGTaGTCTTACTTTCTGAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASNELRK*SYFLSN Trigger: GTTACTCAGAAAGTAAGAGCACTTTCTGAGCTCATT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAAACAATCTCTGAGATGGGGAAATAGCTaGCCTACAACTCATTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: TSPVQTPSCCSLSAKQSLRWGNS*PTTHLH Trigger: GTGTAAATGAGTTGTAGGCCAGCTATTTCCCCATCT...CAGAGATTGTTTTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCATGTTTGATTTTAACTaGCTCTTCCAACAAGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASMFDFN*LFQQGK Trigger: CTTGCCTTGTTGGAAGAGCCAGTTAAAATCAAACAT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCACTTAAGACTGCCACAGGTAAGACAACCCACCCTACTAGTTCTTAAAGCTTCCCAAACAGAAAGGTaGTTAACCTTCTTTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: PHLRLPQVRQPTLLVLKASQTER*LTFFPI Trigger: AATGGGAAAGAAGGTTAAGCACCTTTCTGTTTGGGA...AGCTTTAAGAACTAGTAGGGTGGGTTGTCTTACCTGTGGCAGTCTTAAGTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCACATTCGTACGTTATTTaGTATCATTGCTCTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPHSYVI*YHCSLH Trigger: GTGCAGAGAGCAATGATAGCAAATAACGTACGAATG...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAATGCAAAATTCAGATaGACAGGGTTTGGAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: TINGSIMPVCLPRKEAASNAKFR*TGFGNH Trigger: ATGATTTCCAAACCCTGTGCATCTGAATTTTGCATT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCACACTAAACTGTTGGTaGCAAGAAAACCTTTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: HAVYEKRMAASSLNIRMGTLNCW*QENLLF Trigger: GAATAAAAGGTTTTCTTGCCACCAACAGTTTAGTGT...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCAGAATTCCCAGAGAGCCCAAAAAGAGAAAAACAAGCAGCTCAGGGTGTGGTGATGAATCCATTTaGCTTGAGACAACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FPRIPREPKKRKTSSSGCGDESI*LETTFQ Trigger: TTGAAAAGTTGTCTCAAGTCAAATGGATTCATCACC...ACACCCTGAGCTGCTTGTTTTTCTCTTTTTGGGCTCTCTGGGAATTCTGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAGGTGATGAATCCATTTaGCTTGAGACAACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPGDESI*LETTFQ Trigger: TTGAAAAGTTGTCTCAAGTCAAATGGATTCATCACC...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 ENSMUST00000188134.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCAGAATTCCCAGAGAGCCCAAAAAGAGAAAAACAAGCAGCTCAGGGTGTTGCCAATATCAGCTTTaGTTTGTGTTTAACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FPRIPREPKKRKTSSSGCCQYQL*FVFNSA Trigger: AGCACTGTTAAACACAAATCAAAGCTGATATTGGCA...ACACCCTGAGCTGCTTGTTTTTCTCTTTTTGGGCTCTCTGGGAATTCTGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATGGACATACCAATTGCTaGCCACCAAAAATGTACCGC | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYGHTNC*PPKMYR Trigger: GCGGTACATTTTTGGTGGTCAGCAATTGGTATGTCC...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCACAGCAAAACAATCTCTaGGATCTCTTACTGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPQQNNL*DLLLIF Trigger: AAAGATCAGTAAGAGATCTCAGAGATTGTTTTGCTG...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATGGCTGTTTCCATTTCTaGCCAACAAAGGGCTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYGCFHF*PTKGLL Trigger: CAACAAGCCCTTTGTTGGCCAGAAATGGAAACAGCC...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAAAATGCCAAGAAACTTTATaGAAGTTCCATCTCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKYVCEADGFWTSSKGEKCQETL*KFHLKR Trigger: CCTTTTGAGATGGAACTTTCATAAAGTTTCTTGGCA...TTTTTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 ENSMUST00000188134.7 |
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| 3UTR-3UTR TCA 90 bp | GTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAAAACTGCCAAGAAACTTTATaGAAGTTCCATCTCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VNMCVRLMDSGRAPKEKNCQETL*KFHLKR Trigger: CCTTTTGAGATGGAACTTTCATAAAGTTTCTTGGCA...GTTTTTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 ENSMUST00000188134.7 |
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| 3UTR-3UTR TCA 90 bp | GTGTATGAAAAGCTCTATCCAGGAGTAAGAGTAAGCGCTAACATGCTCTGTGCTAACATGTTAAAAGGCTaGTCAACACTGAAAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: VYEKLYPGVRVSANMLCANMLKG*STLKDF Trigger: GAAGTCTTTCAGTGTTGATCAGCCTTTTAACATGTT...AGCACAGAGCATGTTAGCGCTTACTCTTACTCCTGGATAGAGCTTTTCATACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATGGAAATCTTTATACATaGAGGCTACACTCACGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYGNLYT*RLHSRC Trigger: GCACCGTGAGTGTAGCCTTCATGTATAAAGATTTCC...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR CAA 90 bp | CATGAAGGCTACACTCACGGTGCTGGTTTTGACAATGATATAGCATaGATTAAACTCAAGAACAAAGTCACAATCAACGGAAGCATCATG | + |
|
Preference number: 2 (lower is better) Translates to: HEGYTHGAGFDNDIA*IKLKNKVTINGSIM Trigger: CATGATGCTTCCGTTGATTGTGACTTTGTTCTTGAGTTTAATCAATGCTATATCATTGTCAAAACCAGCACCGTGAGTGTAGCCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| 3UTR-3UTR GCA 90 bp | GCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATTCCACTTGCTTACCATTTTAGGTaGGGTCACCCAGACTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AHGFLVSSTSSLLQLIPLAYHFR*GHPDLR Trigger: TCTTAAGTCTGGGTGACCGCACCTAAAATGGTAAGC...AAGTGGAATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATTTCCAGAATACCTTTTaGAAGGTAAGCGGAAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYFQNTF*KVSGKQ Trigger: CTGCTTTCCGCTTACCTTCCAAAAGGTATTCTGGAA...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACCTCATTTACGGCAAGTAACTAACTACAGCTATGTCATCCATAAACATGTTGCTTACCATTTTAGGTaGGGTCACCCAGACTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KPHLRQVTNYSYVIHKHVAYHFR*GHPDLR Trigger: TCTTAAGTCTGGGTGACCGCACCTAAAATGGTAAGC...AACATGTTTATGGATGACATAGCTGTAGTTAGTTACTTGCCGTAAATGAGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAAGGCATGATTCCCCAGTGGAGATTTATACAGCATGTAAATAGAAAATCAGCTTACCATTTTAGGTaGGGTCACCCAGACTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LEGMIPQWRFIQHVNRKSAYHFR*GHPDLR Trigger: TCTTAAGTCTGGGTGACCGCACCTAAAATGGTAAGC...TGATTTTCTATTTACATGCTGTATAAATCTCCACTGGGGAATCATGCCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAAACTGTTGGTGGCAAGAAAACCTTTTATTCAACTGTGGTTCAAAGAGTTGTAGGGTTTGGAAATCATaGAGGGTTAGATGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LNCWWQENLLFNCGSKSCRVWKS*RVRCRE Trigger: TTCTCTGCATCTAACCCTGCATGATTTCCAAACCCT...ACAACTCTTTGAACCACAGTTGAATAAAAGGTTTTCTTGCCACCAACAGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATGTTCTACCAGATTCACCAAATTGTCAGATAAAAAGAACACGAAACAGCATAGGCACATGGTTTCTTaGTTTCTTCTACTTCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: ACSTRFTKLSDKKNTKQHRHMVS*FLLLHP Trigger: GGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCT...ATGCTGTTTCGTGTTCTTTTTATCTGACAATTTGGTGAATCTGGTAGAACATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATGGTGATGAATCCATTTaGCTTGAGACAACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYGDESI*LETTFQ Trigger: TTGAAAAGTTGTCTCAAGTCAAATGGATTCATCACC...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 ENSMUST00000188134.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATTAACCTTCTTTCCCATTaGTATGCTCTGCTACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FQAHGFLVSSTSSLLQLINLLSH*YALLQS Trigger: GCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTT...AATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTAACTACAGCTATGTCATCCATAAACATGTTAAAAGGCTGATCAACACTGAAAACCTTCTTTCCCATTaGTATGCTCTGCTACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TNYSYVIHKHVKRLINTENLLSH*YALLQS Trigger: GCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTT...TTCAGTGTTGATCAGCCTTTTAACATGTTTATGGATGACATAGCTGTAGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | GTATCAAAAACAGTAAGTTATCCTGAAATAAACTGCTCTTCTGCTAAGATGCTGAACCTTCTTTCCCATTaGTATGCTCTGCTACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VSKTVSYPEINCSSAKMLNLLSH*YALLQS Trigger: GCTTTGTAGCAGAGCATATCAATGGGAAAGAAGGTT...CAGCATCTTAGCAGAAGAGCAGTTTATTTCAGGATAACTTACTGTTTTTGATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATATTATTTCTAAGGAATaGACGCGTTTTGATGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: THLKGFHFASKHGNADTYIISKE*TRFDDQ Trigger: CTGGTCATCAAAACGCGTTCATTCCTTAGAAATAAT...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATTGGCATGATTCCCCAGTaGAGATTTATACAGCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FQAHGFLVSSTSSLLQLIGMIPQ*RFIQHV Trigger: TACATGCTGTATAAATCTCCACTGGGGAATCATGCC...AATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGCAACTTGCAAAATGACAAACCTATTTATCATAATCTATTTAGGTAAGGGCGGCATGATTCCCCAGTaGAGATTTATACAGCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: HATCKMTNLFIIIYLGKGGMIPQ*RFIQHV Trigger: TACATGCTGTATAAATCTCCACTGGGGAATCATGCC...GCCCTTACCTAAATAGATTATGATAAATAGGTTTGTCATTTTGCAAGTTGCGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTAACTACAGCTATGTCATCCATAAACATGTTAAAAGGCTGATCAACACTGAAGGCATGATTCCCCAGTaGAGATTTATACAGCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TNYSYVIHKHVKRLINTEGMIPQ*RFIQHV Trigger: TACATGCTGTATAAATCTCCACTGGGGAATCATGCC...TTCAGTGTTGATCAGCCTTTTAACATGTTTATGGATGACATAGCTGTAGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTATTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTTGCCAAGAAACTTTATaGAAGTTCCATCTCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CISGTWFLGFFYFIPIAICQETL*KFHLKR Trigger: CCTTTTGAGATGGAACTTTCATAAAGTTTCTTGGCA...AATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTATTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTGGTGATGAATCCATTTaGCTTGAGACAACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: CISGTWFLGFFYFIPIAIGDESI*LETTFQ Trigger: TTGAAAAGTTGTCTCAAGTCAAATGGATTCATCACC...AATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAAACTGTTGGTGGCAAGAAAACCTTTTATTCAACTGTGGTTCAAAGAGTTGTATTATTTCTAAGGAATaGACGCGTTTTGATGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LNCWWQENLLFNCGSKSCIISKE*TRFDDQ Trigger: CTGGTCATCAAAACGCGTTCATTCCTTAGAAATAAT...ACAACTCTTTGAACCACAGTTGAATAAAAGGTTTTCTTGCCACCAACAGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGCAACTTGCAAAATGACAAACCTATTTATCATAATCTATTTAGGTAAGGGCTCCCAAACAGAAAGGTaGTTAACCTTCTTTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: HATCKMTNLFIIIYLGKGSQTER*LTFFPI Trigger: AATGGGAAAGAAGGTTAAGCACCTTTCTGTTTGGGA...GCCCTTACCTAAATAGATTATGATAAATAGGTTTGTCATTTTGCAAGTTGCGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | GTATCAAAAACAGTAAGTTATCCTGAAATAAACTGCTCTTCTGCTAAGATGCTGCATTCGTACGTTATTTaGTATCATTGCTCTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VSKTVSYPEINCSSAKMLHSYVI*YHCSLH Trigger: GTGCAGAGAGCAATGATAGCAAATAACGTACGAATG...CAGCATCTTAGCAGAAGAGCAGTTTATTTCAGGATAACTTACTGTTTTTGATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGCAACTTGCAAAATGACAAACCTATTTATCATAATCTATTTAGGTAAGGGCCATTCGTACGTTATTTaGTATCATTGCTCTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HATCKMTNLFIIIYLGKGHSYVI*YHCSLH Trigger: GTGCAGAGAGCAATGATAGCAAATAACGTACGAATG...GCCCTTACCTAAATAGATTATGATAAATAGGTTTGTCATTTTGCAAGTTGCGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATGTTCTACCAGATTCACCAAATTGTCAGATAAAAAGAACACGAAACAGCATCTTTGCATTCAGGGCTaGAAAACAAAGACACATATT | + |
|
Preference number: 2 (lower is better) Translates to: ACSTRFTKLSDKKNTKQHLCIQG*KTKTHI Trigger: AATATGTGTCTTTGTTTTGCAGCCCTGAATGCAAAG...ATGCTGTTTCGTGTTCTTTTTATCTGACAATTTGGTGAATCTGGTAGAACATGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 90 bp | AAGCTATCAATCAGGCTTCTTAATGTATTTCAGGCACATGGTTTCTaGGTTTCTTCTACTTCATCCCTATTGCAATTAATTCCACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KLSIRLLNVFQAHGF*VSSTSSLLQLIPLF Trigger: GAAAAGTGGAATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAATACATTAAGAAGCCTGATTGATAGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGATAAAAAGAACACGAAACAGCATTTTACCCTTTACAAGGGCAATTTAGCATGCCAAGAAACTTTATaGAAGTTCCATCTCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SDKKNTKQHFTLYKGNLACQETL*KFHLKR Trigger: CCTTTTGAGATGGAACTTTCATAAAGTTTCTTGGCA...TGCTAAATTGCCCTTGTAAAGGGTAAAATGCTGTTTCGTGTTCTTTTTATCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATGGTGATGAATCCATTTaGCTTGAGACAACTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ISGTWFLGFFYFIPIAINGDESI*LETTFQ Trigger: TTGAAAAGTTGTCTCAAGTCAAATGGATTCATCACC...ATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGATAAAAAGAACACGAAACAGCATTTTACCCTTTACAAGGGCAATTTAGCACTTTGCATTCAGGGCTaGAAAACAAAGACACATATT | + |
|
Preference number: 2 (lower is better) Translates to: SDKKNTKQHFTLYKGNLALCIQG*KTKTHI Trigger: AATATGTGTCTTTGTTTTGCAGCCCTGAATGCAAAG...TGCTAAATTGCCCTTGTAAAGGGTAAAATGCTGTTTCGTGTTCTTTTTATCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGATAAAAAGAACACGAAACAGCATTTTACCCTTTACAAGGGCAATTTAGCATGTATTTCAGGCACATaGTTTCTTGGTTTCTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SDKKNTKQHFTLYKGNLACISGT*FLGFFY Trigger: GTAGAAGAAACCAAGAAACCATGTGCCTGAAATACA...TGCTAAATTGCCCTTGTAAAGGGTAAAATGCTGTTTCGTGTTCTTTTTATCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGATAAAAAGAACACGAAACAGCATTTTACCCTTTACAAGGGCAATTTAGCAAATGCAAAATTCAGATaGACAGGGTTTGGAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: SDKKNTKQHFTLYKGNLANAKFR*TGFGNH Trigger: ATGATTTCCAAACCCTGTGCATCTGAATTTTGCATT...TGCTAAATTGCCCTTGTAAAGGGTAAAATGCTGTTTCGTGTTCTTTTTATCTGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | GGTCTGGCTGGGGAGGCAGAAAGCTCAGCACTTGGCTaGGGCTGGAGCTTAGTGTTTCCCAACAGTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLAGEAESSALG*GWSLVFPNSVL Trigger: GAGCACACTGTTGGGAAACACTAAGCTCCAGCCTCAGCCAAGTGCTGAGCTTTCTGCCTCCCCAGCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | AGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTaGCTTTCCTTGGCAAGTCTTGTTGCTGGGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTHSWRAACKAW*LSLASLVAGSN Trigger: GTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGAATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGCAGGCACATGGTTTCTaGGTTTCTTCTACTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SEWASSKGSHLITLKPGPQAHGF*VSSTSS Trigger: GGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTG...CGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCATTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CCA 72 bp | AAAAGAAGCTGCATCCTTAATGAGAACAGACTTCACTaGAACTGTGGCTGGCTGGGGGTTAACCCAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KRSCILNENRLH*NCGWLGVNPEG Trigger: CCCTTCTGGGTTAACCCCCAGCCAGCCACAGTTCCAGTGAAGTCTGTTCTCATTAAGGATGCAGCTTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGAGGAAATCAAAACCATGCCATaGACAAGTAACTTACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MGILKRLSPHYTQAWPEEIKTMP*TSNLPQ Trigger: CTGGGGTAAGTTACTTGTCAATGGCATGGTTTTGAT...TTCCTCGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | ATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTaGACATCCGAATGGGCATCCTCAAAAGGCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: MLYMRKEWQRPP*TSEWASSKGSH Trigger: GTGAGAGCCTTTTGAGGATGCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | GGGTCAAACTACAGCAGCAGCAGGTGCACTTATACATaGCAATTGGGTCCTAACAGCCGCTCATGCTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: GSNYSSSRCTYT*QLGPNSRSCCI Trigger: TATACAGCATGAGCGGCTGTTAGGACCCAATTGTCATGTATAAGTGCACCTGCTGCTGCTGTAGTTTGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | GTCCTCCTGCACACAAGTCCTGTCCAGACTCCCTCATaGTGTTCTCTTTCAGCAAAACAATCTCTGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLHTSPVQTPS*CSLSAKQSLRS Trigger: AGATCTCAGAGATTGTTTTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGTGTGCAGGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCATTTTTATCCCTCAGTTaGTGGGCTGTCCACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPFLSLS*WAVHTH Trigger: GTGTGTGTGGACAGCCCACAAACTGAGGGATAAAAA...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCTACAGGTCCAAACACTaGCCAATATCAGCTTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: TINGSIMPVCLPRKEAASYRSKH*PISALI Trigger: AATCAAAGCTGATATTGGCAAGTGTTTGGACCTGTA...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | AAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTaGATCCTTAATGAGAACAGACTTCACTGGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KHHACLPTAKRS*ILNENRLHWNC Trigger: ACAGTTCCAGTGAAGTCTGTTCTCATTAAGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | AACTCAAGAACAAAGTCACAATCAACGGAAGCATCATaGCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSRTKSQSTEAS*LFAYREKKLHP Trigger: AGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGTGACTTTGTTCTTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CCA 72 bp | GGGGCATTAGTGTTTCTAGATAATGAGACACAGCGATaGTTTGTGGGAGGAATAGTTTCCTGGGGTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GALVFLDNETQR*FVGGIVSWGSI Trigger: AATGGAACCCCAGGAAACTATTCCTCCCACAAACCATCGCTGTGTCTCATTATCTAGAAACACTAATGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CCA 72 bp | ACTACAGCAGCAGCAGGTGCACTTATACATGACAATTaGGTCCTAACAGCCGCTCATGCTGTATATGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTAAAGALIHDN*VLTAAHAVYEK Trigger: TTTCTCATATACAGCATGAGCGGCTGTTAGGACCCAATTGTCATGTATAAGTGCACCTGCTGCTGCTGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAATCAAATGCACAGAGGCACTCAGAACAAGCCAGAGGGTAACTGCTTACCAACTGCTATGAATTCTTaGCATTCAGGGCGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENQMHRGTQNKPEGNCLPTAMNS*HSGRQR Trigger: TCTTTGACGCCCTGAATGCAAAGAATTCATAGCAGT...TGGTAAGCAGTTACCCTCTGGCTTGTTCTGAGTGCCTCTGTGCATTTGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045180.14 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCACCAGATTCACCAAATaGTCAGATAAAAAGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: HAVYEKRMAASSLNIRMGTRFTK*SDKKNT Trigger: CGTGTTCTTTTTATCTGACAATTTGGTGAATCTGGT...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTGTATATGAGAAAAGAATGGCAGCGTCCTCCCTGAACATCCGAATGGGCAATATCAGCTTTGATTaGTGTTTAACAGTGCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HAVYEKRMAASSLNIRMGNISFD*CLTVLG Trigger: GCCAAGCACTGTTAAACACAAATCAAAGCTGATATT...GCCCATTCGGATGTTCAGGGAGGACGCTGCCATTCTTTTCTCATATACAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | GAGCTCAGAAAGTGCTCTTACTTTCTGAGTAACTTCTaGGTGGTTCCAGAATACCTTTTGGAAGGTAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ELRKCSYFLSNF*VVPEYLLEGKR Trigger: CCGCTTACCTTCCAAAAGGTATTCTGGAACCACTCAGAAGTTACTCAGAAAGTAAGAGCACTTTCTGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | AACAAAGTCACAATCAACGGAAGCATCATGCCTGTTTaGCTACCGCGAAAAGAAGCTGCATCCTTAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NKVTINGSIMPV*LPRKEAASLMR Trigger: TCTCATTAAGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGTGACTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | GTGTGCTCACATTTCCCCTTCCACACGGAAGCTAGGTaGATCATGCACTTGATTGTTTTTGACCTTATAACT | + |
|
Preference number: 3 (lower is better) Translates to: VCSHFPFHTEAR*IMHLIVFDLIT Trigger: AGTTATAAGGTCAAAAACAATCAAGTGCATGATGCACCTAGCTTCCGTGTGGAAGGGGAAATGTGAGCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CCA 72 bp | AAGATGCTGACCTTAAAGGTCATGTTTGATTTTAACTaGCTCTTCCAACAAGGCAAGACAGGGTGCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KMLTLKVMFDFN*LFQQGKTGCLK Trigger: CTTGAGGCACCCTGTCTTGCCTTGTTGGAAGAGCCAGTTAAAATCAAACATGACCTTTAAGGTCAGCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAAAACTCACTGCTATGAATTCTTaGCATTCAGGGCGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KYVCEADGFWTSSKGEKLTAMNS*HSGRQR Trigger: TCTTTGACGCCCTGAATGCAAAGAATTCATAGCAGT...GAGTTTTTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188134.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAAACAATCTCTGGTCCATTCCAGAATATaGGGATATAGGCATGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSPVQTPSCCSLSAKQSLVHSRI*GYRHVL Trigger: TAGAACATGCCTATATCCCAATATTCTGGAATGGAC...CAGAGATTGTTTTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTATGAAAAGCTCTATCCAGGAGTAAGAGTAAGCGCTAACATGCTCTGTGCTCCAACAAAGGGCTTGTaGTGTCTAGTGTGTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VYEKLYPGVRVSANMLCAPTKGL*CLVCRF Trigger: AAATCTACACACTAGACACAACAAGCCCTTTGTTGG...AGCACAGAGCATGTTAGCGCTTACTCTTACTCCTGGATAGAGCTTTTCATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCATTGTGGACATACCAATaGCTGACCACCAAAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPLWTYQ*LTTKNV Trigger: TACATTTTTGGTGGTCAGCAATTGGTATGTCCACAA...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | ATTGTTACAGGTCCAAACACTTGCCAATATCAGCTTTaGTTTGTGTTTAACAGTGCTTGGCCAACCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVTGPNTCQYQL*FVFNSAWPTPN Trigger: GTTGGGGGTTGGCCAAGCACTGTTAAACACAAATCAAAGCTGATATTGGCAAGTGTTTGGACCTGTAACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | TTTGGAGGGCTCCACCAGACCAAAATTACCAATTTTTaGACCAGAAGCACTTTGGCTATTGCTGCAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: FGGLHQTKITNF*TRSTLAIAATL Trigger: CAATGTTGCAGCAATAGCCAAAGTGCTTCTGGTTCAAAAATTGGTAATTTTGGTCTGGTGGAGCCCTCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGACTTGCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAACCAGATTCACCAAATaGTCAGATAAAAAGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: NDLQVNMCVRLMDSGRAPTRFTK*SDKKNT Trigger: CGTGTTCTTTTTATCTGACAATTTGGTGAATCTGGT...TGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGCAAGTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | GTGCACAACCACAATAAAGAACATGTGTTGCATTCCTaGGCCCTCAGTTTGCAAAGAACGGTAAAAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VHNHNKEHVLHS*ALSLQRTVKVF Trigger: AAACACTTTTACCGTTCTTTGCAAACTGAGGGCTCAGGAATGCAACACATGTTCTTTATTGTGGTTGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATCAGGCACATGGTTTCTaGGTTTCTTCTACTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: THLKGFHFASKHGNADTYQAHGF*VSSTSS Trigger: GGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTG...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTATGAAAAGCTCTATCCAGGAGTAAGAGTAAGCGCTAACATGCTCTGTGCTAATATCAGCTTTGATTaGTGTTTAACAGTGCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VYEKLYPGVRVSANMLCANISFD*CLTVLG Trigger: GCCAAGCACTGTTAAACACAAATCAAAGCTGATATT...AGCACAGAGCATGTTAGCGCTTACTCTTACTCCTGGATAGAGCTTTTCATACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATTCAGAGCAGGTGAGATaGTTACAGGTCCAAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: THLKGFHFASKHGNADTYSEQVR*LQVQTL Trigger: AAGTGTTTGGACCTGTAACAATCTCACCTGCTCTGA...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATTCCACTTCAGGCACATGGTTTCTaGGTTTCTTCTACTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: AHGFLVSSTSSLLQLIPLQAHGF*VSSTSS Trigger: GGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTG...AAGTGGAATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTTCTACCAGATTCACCAAATTGTCAGATAAAAAGAACACGAAACAGCATATCAAAACCATGCCATaGACAAGTAACTTACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACSTRFTKLSDKKNTKQHIKTMP*TSNLPQ Trigger: CTGGGGTAAGTTACTTGTCAATGGCATGGTTTTGAT...ATGCTGTTTCGTGTTCTTTTTATCTGACAATTTGGTGAATCTGGTAGAACATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR TCA 72 bp | TTCTCTTTCAGCAAAACAATCTCTGAGATCTCTTACTaGTCTTTACAAGGAGGTGAGCAGGCTAAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSFSKTISEISY*SLQGGEQAKQK Trigger: TTTTTGTTTAGCCTGCTCACCTCCTTGTAAAGATCAGTAAGAGATCTCAGAGATTGTTTTGCTGAAAGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | CAATTAATTCCACTTTTCAAATCCCAAACAGAAAGGTaGTTAACCTTCTTTCCCATTGATATGCTCTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QLIPLFKSQTER*LTFFPIDMLCY Trigger: GTAGCAGAGCATATCAATGGGAAAGAAGGTTAAGCACCTTTCTGTTTGGGATTTGAAAAGTGGAATTAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | TTTAAAGACAACAGAAACTTTGTAAATCATAGTTCCTaGTTTCCCAGAATTCCCAGAGAGCCCAAAAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FKDNRNFVNHSS*FPRIPREPKKR Trigger: TCTCTTTTTGGGCTCTCTGGGAATTCTGGGAAAGCAGGAACTATGATTTACAAAGTTTCTGTTGTCTTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | TATGTATCAAAAACAGTAAGTTATCCTGAAATAAACTaGTCTTCTGCTAAGATGCTGACCTTAAAGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: YVSKTVSYPEIN*SSAKMLTLKVM Trigger: CATGACCTTTAAGGTCAGCATCTTAGCAGAAGAGCAGTTTATTTCAGGATAACTTACTGTTTTTGATACATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR GCA 72 bp | AACAAAAACTTAAATAGCCTCACTCAACAGGGAGGATaGCTATCAATTTGTAGGGCATTAAATACTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NKNLNSLTQQGG*LSICRALNTCF Trigger: AAAACAAGTATTTAATGCCCTACAAATTGATAGGCATCCTCCCTGTTGAGTGAGGCTATTTAAGTTTTTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 72 bp | CAGCCTGCAAAGCCTGGTGACTTTCCTTGGCAAGTCTaGTTGCTGGGTCAAACTACAGCAGCAGCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPAKPGDFPWQV*LLGQTTAAAGA Trigger: TGCACCTGCTGCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 72 bp | CCTGCAAAGCCTGGTGACTTTCCTTGGCAAGTCTTGTaGCTGGGTCAAACTACAGCAGCAGCAGGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PAKPGDFPWQVL*LGQTTAAAGAL Trigger: AAGTGCACCTGCTGCTGCTGTAGTTTGACCCAGCAACAAGACTTGCCAAGGAAAGTCACCAGGCTTTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAAATATGTGTGTGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAACTGCTCTGCAACGCTaGCTGAGCCGCAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGKYVCEADGFWTSSKGETALQR*LSRSHH Trigger: ATGATGGCTGCGGCTCAGGCAGCGTTGCAGAGCAGT...TTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTCACACACATATTTACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084125.10 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGGACGCATAGTTGGAGGGCAGCCTGCAAAGCCTGGTGACTTTCCTTGGCCAAACCCTTTCGAGTaGCCAGTTTTAAGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGGRIVGGQPAKPGDFPWPNPFE*PVLRSF Trigger: GAAAGATCTTAAAACTGGTCACTCGAAAGGGTTTGG...CCAAGGAAAGTCACCAGGCTTTGCAGGCTGCCCTCCAACTATGCGTCCTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGAGGAAGGCAACCTTATCATCTaGAAAGGTGACGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MGILKRLSPHYTQAWPEEGNLII*KGDEGK Trigger: TTTGCCTTCGTCACCTTTGCAGATGATAAGGTTGCC...TTCCTCGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATGAGCCCCAGGACTCCTaGCCGTCTTTGGAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: THLKGFHFASKHGNADTYEPQDS*PSLEVP Trigger: GGGGACCTCCAAAGACGGCCAGGAGTCCTGGGGCTC...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188488.2 |
||
| CDS-3UTR GCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCGGCAACCTTATCATCTaGAAAGGTGACGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TINGSIMPVCLPRKEAASGNLII*KGDEGK Trigger: TTTGCCTTCGTCACCTTTGCAGATGATAAGGTTGCC...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CCA 90 bp | ACAATCAACGGAAGCATCATGCCTGTTTGCCTACCGCGAAAAGAAGCTGCATCCAGACAGAAGTATTCCTaGATTACCACCAAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TINGSIMPVCLPRKEAASRQKYS*ITTKSS Trigger: GGAAGATTTGGTGGTAATCCAGGAATACTTCTGTCT...GGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105702.9 |
||
| 3UTR CAA 72 bp | GAACAAAGTCACAATCAACGGAAGCATCATGCCTGTTaGCCTACCGCGAAAAGAAGCTGCATCCTTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSHNQRKHHAC*PTAKRSCILNE Trigger: CTCATTAAGGATGCAGCTTCTTTTCGCGGTAGGCAAACAGGCATGATGCTTCCGTTGATTGTGACTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR GCA 90 bp | GTGTATGAAAAGCTCTATCCAGGAGTAAGAGTAAGCGCTAACATGCTCTGTGCTGGCAACCTTATCATCTaGAAAGGTGACGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VYEKLYPGVRVSANMLCAGNLII*KGDEGK Trigger: TTTGCCTTCGTCACCTTTGCAGATGATAAGGTTGCC...AGCACAGAGCATGTTAGCGCTTACTCTTACTCCTGGATAGAGCTTTTCATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 72 bp | ACTGGCTGTTTCCATTTCTGGCCAACAAAGGGCTTGTaGTGTCTAGTGTGTAGATTTGGTCTTAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGCFHFWPTKGL*CLVCRFGLNEL Trigger: GAGCTCATTAAGACCAAATCTACACACTAGACACAACAAGCCCTTTGTTGGCCAGAAATGGAAACAGCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR TCA 90 bp | GTGTATGAAAAGCTCTATCCAGGAGTAAGAGTAAGCGCTAACATGCTCTGTGCTCCAAACCCTTTCGAGTaGCCAGTTTTAAGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYEKLYPGVRVSANMLCAPNPFE*PVLRSF Trigger: GAAAGATCTTAAAACTGGTCACTCGAAAGGGTTTGG...AGCACAGAGCATGTTAGCGCTTACTCTTACTCCTGGATAGAGCTTTTCATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR TCA 90 bp | GTTACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCCCATGTTACTGCTGCTaGGTAACAGTGCAAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLKGFHFASKHGNADTPCYCC*VTVQTV Trigger: CACTGTTTGCACTGTTACTCAGCAGCAGTAACATGG...GGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188488.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGCATGATTCCCCAGTGGAGATTTATACAGCATGTAAATAGAAAATCAATGCTGCCCTGGCTTTaGTTATTCCCAGATGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGMIPQWRFIQHVNRKSMLPWL*LFPDGP Trigger: GGGCCCATCTGGGAATAACCAAAGCCAGGGCAGCAT...TGATTTTCTATTTACATGCTGTATAAATCTCCACTGGGGAATCATGCCTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084125.10 |
||
| CDS-3UTR CCA 90 bp | TTTATGAAATCATGTAAAATGGTTATTCACACACCTCTCCCCACCACAGATGCTGAGGCTGATGGATTCTaGACGAGCTCCAAAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FMKSCKMVIHTPLPTTDAEADGF*TSSKGE Trigger: TTCTCCTTTGGAGCTCGTCCAGAATCCATCAGCCTC...AGCATCTGTGGTGGGGAGAGGTGTGTGAATAACCATTTTACATGATTTCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188488.2 |
||
| 3UTR CAA 72 bp | GTTTGGAGGGCTCCACCAGACCAAAATTACCAATTTTaGAACCAGAAGCACTTTGGCTATTGCTGCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: VWRAPPDQNYQF*NQKHFGYCCNI Trigger: AATGTTGCAGCAATAGCCAAAGTGCTTCTGGTTCAAAAATTGGTAATTTTGGTCTGGTGGAGCCCTCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CCA 90 bp | ACACATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATCAGTGCAAACAGTGCTaGATTACCACCAAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THLKGFHFASKHGNADTYQCKQC*ITTKSS Trigger: GGAAGATTTGGTGGTAATCCAGCACTGTTTGCACTG...ATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188488.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAAATATTTTTAGAAGGCATGATTCCCCAGTGGAGATTTATACAGCATGTAGGCAACCTTATCATCTaGAAAGGTGACGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQIFLEGMIPQWRFIQHVGNLII*KGDEGK Trigger: TTTGCCTTCGTCACCTTTGCAGATGATAAGGTTGCC...TACATGCTGTATAAATCTCCACTGGGGAATCATGCCTTCTAAAAATATTTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGGCAAGAAAACCTTTTATTCAACTGTGGTTCAAAGAGTTGTTCTTCATCCAAACCCTTTCGAGTaGCCAGTTTTAAGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKKTFYSTVVQRVVLHPNPFE*PVLRSF Trigger: GAAAGATCTTAAAACTGGTCACTCGAAAGGGTTTGG...ATGAAGAACAACTCTTTGAACCACAGTTGAATAAAAGGTTTTCTTGCCACCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATTGGCAACCTTATCATCTaGAAAGGTGACGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQAHGFLVSSTSSLLQLIGNLII*KGDEGK Trigger: TTTGCCTTCGTCACCTTTGCAGATGATAAGGTTGCC...AATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTAATCCAAACCCTTTCGAGTaGCCAGTTTTAAGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISGTWFLGFFYFIPIAINPNPFE*PVLRSF Trigger: GAAAGATCTTAAAACTGGTCACTCGAAAGGGTTTGG...ATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR TCA 90 bp | TCAGATAAAAAGAACACGAAACAGCATTTTACCCTTTACAAGGGCAATTTAGCACCAAACCCTTTCGAGTaGCCAGTTTTAAGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDKKNTKQHFTLYKGNLAPNPFE*PVLRSF Trigger: GAAAGATCTTAAAACTGGTCACTCGAAAGGGTTTGG...TGCTAAATTGCCCTTGTAAAGGGTAAAATGCTGTTTCGTGTTCTTTTTATCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 72 bp | TACACTCACGGTGCTGGTTTTGACAATGATATAGCATaGATTAAACTCAAGAACAAAGTCACAATCAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTHGAGFDNDIA*IKLKNKVTING Trigger: TCCGTTGATTGTGACTTTGTTCTTGAGTTTAATCAATGCTATATCATTGTCAAAACCAGCACCGTGAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| 3UTR CAA 72 bp | ATCAGGCTTCTTAATGTATTTCAGGCACATGGTTTCTaGGTTTCTTCTACTTCATCCCTATTGCAATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IRLLNVFQAHGF*VSSTSSLLQLI Trigger: AATTAATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAATACATTAAGAAGCCTGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGCATCCTCAAAAGGCTCTCACCTCATTACACTCAAGCCTGGCCCGAGGAATCAGATCCTGCTCAGTaGTTTTCCAGGGGAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: MGILKRLSPHYTQAWPEESDPAQ*FSRGDP Trigger: TGGGTCTCCCCTGGAAAACAACTGAGCAGGATCTGA...TTCCTCGGGCCAGGCTTGAGTGTAATGAGGTGAGAGCCTTTTGAGGATGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTCCTGTCCAGACTCCCTCATGCTGTTCTCTTTCAGCAAAACAATCTCTGTCAGATCCTGCTCAGTaGTTTTCCAGGGGAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSPVQTPSCCSLSAKQSLSDPAQ*FSRGDP Trigger: TGGGTCTCCCCTGGAAAACAACTGAGCAGGATCTGA...CAGAGATTGTTTTGCTGAAAGAGAACAGCATGAGGGAGTCTGGACAGGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CAA 90 bp | CCTCACTTAAGACTGCCACAGGTAAGACAACCCACCCTACTAGTTCTTAAAGCTTCAGATCCTGCTCAGTaGTTTTCCAGGGGAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PHLRLPQVRQPTLLVLKASDPAQ*FSRGDP Trigger: TGGGTCTCCCCTGGAAAACAACTGAGCAGGATCTGA...AGCTTTAAGAACTAGTAGGGTGGGTTGTCTTACCTGTGGCAGTCTTAAGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACTGTTGGTGGCAAGAAAACCTTTTATTCAACTGTGGTTCAAAGAGTTGTCATGCTGCCCTGGCTTaGGTTATTCCCAGATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNCWWQENLLFNCGSKSCHAALA*VIPRWA Trigger: GGCCCATCTGGGAATAACCAAAGCCAGGGCAGCATG...ACAACTCTTTGAACCACAGTTGAATAAAAGGTTTTCTTGCCACCAACAGTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084125.10 |
||
| CDS-3UTR CAA 90 bp | TGTATTTCAGGCACATGGTTTCTTGGTTTCTTCTACTTCATCCCTATTGCAATTTCAGATCCTGCTCAGTaGTTTTCCAGGGGAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CISGTWFLGFFYFIPIAISDPAQ*FSRGDP Trigger: TGGGTCTCCCCTGGAAAACAACTGAGCAGGATCTGA...AATTGCAATAGGGATGAAGTAGAAGAAACCAAGAAACCATGTGCCTGAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045180.14 ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 |
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| CDS-3UTR CAA 90 bp | CATCTAAAAGGTTTCCACTTTGCAAGCAAACATGGTAATGCAGACACCTATTTATCAGATCCTGCTCAGTaGTTTTCCAGGGGAGACCCA | + |
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Preference number: 5 (lower is better) Translates to: HLKGFHFASKHGNADTYLSDPAQ*FSRGDP Trigger: TGGGTCTCCCCTGGAAAACAACTGAGCAGGATCTGA...TAAATAGGTGTCTGCATTACCATGTTTGCTTGCAAAGTGGAAACCTTTTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000084125.10 ENSMUST00000105702.9 ENSMUST00000165113.8 ENSMUST00000172073.8 ENSMUST00000188134.7 |
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