Pregenerated sensors for TARBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023051Ensembl transcript IDs: ENSMUST00000023813.9, ENSMUST00000100168.10, ENSMUST00000131184.8, ENSMUST00000149200.8, ENSMUST00000154948.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGGCTCAGTTCCTCTGGAAACCAAGAAAGAGAAGGGAGGCACTaGTGGGGAAGGGGCACCAAACAGTGTACACATCACCCATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LRLSSSGNQEREGRH*WGRGTKQCTHHPSP Trigger: GGGAGATGGGTGATGTGTACACTGTTTGGTGCCCCTTCCCCACCAGTGCCTCCCTTCTCTTTCTTGGTTTCCAGAGGAACTGAGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR GCA 90 bp | GAAGGAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATaGTACTTGCTACCCGCCATGATCCTGAGGTACTGTAGGGCGCGG | + |
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Preference number: 1 (lower is better) Translates to: EGARSKRCISITAVG*YLLPAMILRYCRAR Trigger: CCGCGCCCTACAGTACCTCAGGATCATGGCGGGTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR GCA 90 bp | GGTGGATACATGGACCCAGGGGCAGAAGGAGCAAGAAGTAAAAGATaGATATCCATCACTGCAGTGGGATGCTACTTGCTACCCGCCATG | + |
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Preference number: 1 (lower is better) Translates to: GGYMDPGAEGARSKR*ISITAVGCYLLPAM Trigger: CATGGCGGGTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTCCTTCTGCCCCTGGGTCCATGTATCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR TCA 90 bp | TTCAAAAGGAGAACAAGCTCACCATGTTTATTCCTTATACCCTCATaGCCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: FKRRTSSPCLFLIPS*PKARESRVLEAKEQ Trigger: CTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACATGGTGAGCTTGTTCTCCTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCAGAGCCCCTAGAGAGCCCACGGAGCAACTGCGAAGGGATAGGATCTTTGGAGAGACAGGGGGCTaGATCTCCATGGGAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: EPRAPREPTEQLRRDRIFGETGG*ISMGGL Trigger: GAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCC...AAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR GCA 90 bp | GAAACGCTCCACCCGGCAAGTCATGGTGAACTCTTTGCGGTGAGCAGGCCCAGAGGAGAGACAGGGGGCTaGATCTCCATGGGAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ETLHPASHGELFAVSRPRGETGG*ISMGGL Trigger: GAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCC...TCTGGGCCTGCTCACCGCAAAGAGTTCACCATGACTTGCCGGGTGGAGCGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCAGAGCCCCTAGAGAGCCCACGGAGCAACTGCGAAGGGATAGGATCTTTTGCACCACCAGCTCCTaGAGAGCACCGACGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: EPRAPREPTEQLRRDRIFCTTSS*RAPTGL Trigger: CAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTGCA...AAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGAAGGGGCACCAAACAGTGTACACATCACCCATCTCCCAACTCCTTCATGCACCACCAGCTCCTaGAGAGCACCGACGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GGEGAPNSVHITHLPTPSCTTSS*RAPTGL Trigger: CAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTGCA...TGAAGGAGTTGGGAGATGGGTGATGTGTACACTGTTTGGTGCCCCTTCCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGCACCACCAGCTCCTaGAGAGCACCGACGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: HGELFAVSRPRLLGHHVLCTTSS*RAPTGL Trigger: CAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTGCA...GAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAACGCCAGCCTTTTTGTTGCACTCAGACTGCTaGGGAGAGACAGGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRPRLLGHHVLWQTPAFLLHSDC*GETGGC Trigger: GCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA...CAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAACTTGCACTCAGACTGCTaGGGAGAGACAGGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLCGEQAQTLGSPCTLANLHSDC*GETGGC Trigger: GCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA...GTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGCTCCTTGCTTGCCTGTaGCTTCCTCAGTCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSITHGMRTNPVLAGALWLLACL*LPQSQG Trigger: GCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAG...CCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTTGCTTGCCTGTGCCTTCCTCAGTCTCAAGGCAGACAGGCTGTGTCAGAGGTACCAGAGCTAGGTaGATACATGGACCCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: APCLPVPSSVSRQTGCVRGTRAR*IHGPRG Trigger: GCCCCTGGGTCCATGTATCCACCTAGCTCTGGTACC...TCTGACACAGCCTGTCTGCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | CATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGGTACCAGAGCTAGGTaGATACATGGACCCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HHPRNEDKSCAGWGPVVHGTRAR*IHGPRG Trigger: GCCCCTGGGTCCATGTATCCACCTAGCTCTGGTACC...ATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR CAA 90 bp | CCGGCAAGTCATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTaGGGTCACCATGTACTCTGGCAAACGCCAGCCTTTTTGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: PASHGELFAVSRPRL*GHHVLWQTPAFLHH Trigger: GTGGTGCAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATGACTTGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCATCACTGCAGTGGGATGCTACTTGCTACCCGCCATGATCCTGAGGTACTGTTGCACTCAGACTGCTaGGGAGAGACAGGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: IHHCSGMLLATRHDPEVLLHSDC*GETGGC Trigger: GCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA...CAGTACCTCAGGATCATGGCGGGTAGCAAGTAGCATCCCACTGCAGTGATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGCTCCTTGCTTGCCTGTaGCTTCCTCAGTCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: DSSITHGMRTNPVLAGALLLACL*LPQSQG Trigger: GCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAG...CAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAAGGGGCAGCAGCTTCTaGAGCAACGACAGGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ELFAVSRPRLLGHHVLWQRGSSF*SNDRSV Trigger: GACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCT...TTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAACGCCAGCCTTTTTGGGGGCTGCATCTCCATaGGAGGGCTCCTGGTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: SRPRLLGHHVLWQTPAFLGAASP*EGSWLV Trigger: TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCC...CAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | TACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCGCAGGCCCAGACTCTTaGGTCACCATGTACTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: YPHDPRPERAGFWKPKSSAGPDS*VTMYSG Trigger: GCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGC...GCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTAGGGGCAGCAGCTTCTaGAGCAACGACAGGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PHDPRPERAGFWKPKSSIRGSSF*SNDRSV Trigger: GACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCT...AATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | CACGATTCCTCAGTCCATCCAGGCGGGAGCTCACGCCAATGGAAAAATGATCGTAGGGGCAGCAGCTTCTaGAGCAACGACAGGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: HDSSVHPGGSSRQWKNDRRGSSF*SNDRSV Trigger: GACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCT...ACGATCATTTTTCCATTGGCGTGAGCTCCCGCCTGGATGGACTGAGGAATCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR GCA 90 bp | CCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGAGCACCGACGGGGTTaGACTCAGACTGCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PIDSSITHGMRTNPVLAGEHRRG*TQTAEE Trigger: CTCCTCAGCAGTCTGAGTGCAACCCCGTCGGTGCTC...CCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCCATGGGAGGGCTCCTaGTTAGTACAGCAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: GELFAVSRPRLLGHHVLWPWEGS*LVQQME Trigger: TTCCATCTGCTGTACTAACCAGGAGCCCTCCCATGG...CCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | CACGATTCCTCAGTCCATCCAGGCGGGAGCTCACGCCAATGGAAAAATGATCGTGGGGCTGCATCTCCATaGGAGGGCTCCTGGTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: HDSSVHPGGSSRQWKNDRGAASP*EGSWLV Trigger: TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCC...ACGATCATTTTTCCATTGGCGTGAGCTCCCGCCTGGATGGACTGAGGAATCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCATCTTAGCTGCTGCGTTACGCTTTGCCAGCTTTTTGGAAGTGCCACTGGGGCTGCATCTCCATaGGAGGGCTCCTGGTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: KEHLSCCVTLCQLFGSATGAASP*EGSWLV Trigger: TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCC...AGTGGCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAGCTAAGATGCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | GACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCACAGTGGCTGGCTGGGTaGACAGTTCCACTAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: DPRPERAGFWKPKSSIYSQWLAG*TVPLGT Trigger: AGTGCCTAGTGGAACTGTCCACCCAGCCAGCCACTG...TGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAAGGGGCACCAAACAGTGTACACATCACCCATCTCCCAACTCCTTCATACGCCAATGGAAAAATaGTCGTCATCAGGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VGKGHQTVYTSPISQLLHTPMEK*SSSGSA Trigger: GGCAGAGCCTGATGACGATCATTTTTCCATTGGCGT...ATGAAGGAGTTGGGAGATGGGTGATGTGTACACTGTTTGGTGCCCCTTCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCACTCAGGCTCAGTTCCTCTGGAAACCAAGAAAGAGAAGGGAGGCACTGGGCTTTGCCAGCTTTTTaGAAGTGCCACTGCCAATCT | + |
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Preference number: 2 (lower is better) Translates to: SPLRLSSSGNQEREGRHWALPAF*KCHCQS Trigger: AGATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGC...CCAGTGCCTCCCTTCTCTTTCTTGGTTTCCAGAGGAACTGAGCCTGAGTGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGGCAAGAAGTAAAAGATaGATATCCATCACTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSITHGMRTNPVLAGALWARSKR*ISITAV Trigger: CACTGCAGTGATGGATATGCATCTTTTACTTCTTGC...CCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCATCATGGCTCCTTGCTTaGCTGTGCCTTCCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: DPRPERAGFWKPKSSIYSSWLLA*LCLPQS Trigger: AGACTGAGGAAGGCACAGGCAAGCAAGGAGCCATGA...TGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCATCTTAGCTGCTGCGTTACGCTTTGCCAGCTTTTTGGAAGTGCCACTGGGTCACCATGTACTCTaGCAAACGCCAGCCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RSILAAALRFASFLEVPLGHHVL*QTPAFL Trigger: CAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACC...CAGTGGCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAGCTAAGATGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAAATCCTGTGCTGGCTaGGGCCCTGTGGTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: QHLFRTPIDSSITHGMRTKSCAG*GPVVHG Trigger: GCCATGAACCACAGGGCCCCAGCCAGCACAGGATTT...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCATACTTGCTTTGATCCAGTCCCCTCCATCCCCAGTCTCTAGTTGGCCAGGGAGCTCACGCCAATaGAAAAATGATCGTCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SFILALIQSPPSPVSSWPGSSRQ*KNDRHQ Trigger: CTGATGACGATCATTTTTCCATTGGCGTGAGCTCCC...TGGCCAACTAGAGACTGGGGATGGAGGGGACTGGATCAAAGCAAGTATGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR CAA 90 bp | AAACAGTGTACACATCACCCATCTCCCAACTCCTTCATACTTGCTTaGATCCAGTCCCCTCCATCCCCAGTCTCTAGTTGGCCATACCAA | + |
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Preference number: 2 (lower is better) Translates to: KQCTHHPSPNSFILA*IQSPPSPVSSWPYQ Trigger: TTGGTATGGCCAACTAGAGACTGGGGATGGAGGGGACTGGATCAAAGCAAGTATGAAGGAGTTGGGAGATGGGTGATGTGTACACTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGATGGTTCATGGCTCCTTaGTTGCCTGTGCCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MFIPYTLMTQGQREQGFGWFMAP*LPVPSS Trigger: TGAGGAAGGCACAGGCAAGCAAGGAGCCATGAACCA...TCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACATTCCTTATACCCTCATaGCCCAAGGCCAGAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QHLFRTPIDSSITHGMRTFLIPS*PKARES Trigger: GCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAA...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATGCTACTTGCTACCCTTCATACTTGCTTTaGTCCAGTCCCCTCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: EQEVKDAYPSLQWDATCYPSYLL*SSPLHP Trigger: GGGATGGAGGGGACTGGATCAAAGCAAGTATGAAGG...GTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACACCATGGGAGGGCTCCTaGTTAGTACAGCAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: QHLFRTPIDSSITHGMRTPWEGS*LVQQME Trigger: TTCCATCTGCTGTACTAACCAGGAGCCCTCCCATGG...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACTCCAATAGATTCATCCAAACGCCAGCCTTTTTaGACCACCAGCTCCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RVLEAKEQHLFRTPIDSSKRQPF*TTSSCR Trigger: TCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTT...GGATGAATCTATTGGAGTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACACAGGCTCAGTTCCTCTaGAAACCAAGAAAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QHLFRTPIDSSITHGMRTQAQFL*KPRKRR Trigger: CCTTCTCTTTCTTGGTTTCCAGAGGAACTGAGCCTG...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATGCTACTTGCTACGCAAGAAGTAAAAGATaGATATCCATCACTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: EQEVKDAYPSLQWDATCYARSKR*ISITAV Trigger: CACTGCAGTGATGGATATGCATCTTTTACTTCTTGC...GTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
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| 3UTR GCA 72 bp | TGGGTCACCATGTACTCTGGCAAACGCCAGCCTTTTTaGACCACCAGCTCCTGCAGAGCACCGACGGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: WVTMYSGKRQPF*TTSSCRAPTGL Trigger: CAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| 3UTR CCA 72 bp | GGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATaGCTCCTTGCTTGCCTGTGCCTTCCTCAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQILCWLGPCGS*LLACLCLPQSQ Trigger: TTGAGACTGAGGAAGGCACAGGCAAGCAAGGAGCCATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
||
| 3UTR GCA 72 bp | TCTTTTCTCCCACAGAATTCCGCAAGGAATCCCAGGTaGAGCCTGGCCCACGATTCCTCAGTCCATCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFLPQNSARNPR*SLAHDSSVHPG Trigger: GCCTGGATGGACTGAGGAATCGTGGGCCAGGCTGCACCTGGGATTCCTTGCGGAATTCTGTGGGAGAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
||
| 3UTR GCA 72 bp | CAGAGCCCAGAGCCCCTAGAGAGCCCACGGAGCAACTaGGAAGGGATAGGATCTTTTCTCCCACAGAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSPEPLESPRSN*EGIGSFLPQNS Trigger: GGAATTCTGTGGGAGAAAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCATCTTAGCTGCTGCGTTACGCTTTGCCAGCTTTTTGGAAGTGCCACTGAGCAGGCCCAGACTCTaGGGTCACCATGTACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSILAAALRFASFLEVPLSRPRL*GHHVLW Trigger: CCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCT...CAGTGGCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAGCTAAGATGCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGTTCATGGCTCCTTGCTaGCCTGTGCCTTCCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PIDSSITHGMRTNPVLAGFMAPC*PVPSSV Trigger: GACTGAGGAAGGCACAGGCAAGCAAGGAGCCATGAA...CCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 ENSMUST00000131184.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCATCTTAGCTGCTGCGTTACGCTTTGCCAGCTTTTTGGAAGTGCCACTGTGGTTCATGGCTCCTaGCTTGCCTGTGCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KEHLSCCVTLCQLFGSATVVHGS*LACAFL Trigger: GAGGAAGGCACAGGCAAGCAAGGAGCCATGAACCAC...AGTGGCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAGCTAAGATGCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| 3UTR TCA 72 bp | CACATCACCCATCTCCCAACTCCTTCATACTTGCTTTaGTCCAGTCCCCTCCATCCCCAGTCTCTAGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HITHLPTPSYLL*SSPLHPQSLVG Trigger: GCCAACTAGAGACTGGGGATGGAGGGGACTGGATCAAAGCAAGTATGAAGGAGTTGGGAGATGGGTGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATAGAGAGAGCAGGGTTTaGGAAGCCAAAGAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HDPRPERAGFWKPKSSIYRESRV*EAKEQH Trigger: ATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCT...ATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACTCCAATAGATTCATCCGTGGTTCATGGCTCCTaGCTTGCCTGTGCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVLEAKEQHLFRTPIDSSVVHGS*LACAFL Trigger: GAGGAAGGCACAGGCAAGCAAGGAGCCATGAACCAC...GGATGAATCTATTGGAGTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
||
| 3UTR GCA 72 bp | AGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATaGTACTTGCTACCCGCCATGATCCTGAGGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSKRCISITAVG*YLLPAMILRYC Trigger: ACAGTACCTCAGGATCATGGCGGGTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTTACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| CDS-3UTR TCA 90 bp | GGATCTTTTCTCCCACAGAATTCCGCAAGGAATCCCAGGTGCAGCCTGGCCCACTTCTTGCTGGGGCCCTaGCCAGTGCAGCTGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSFLPQNSARNPRCSLAHFLLGP*PVQLVS Trigger: CGACACCAGCTGCACTGGTCAGGGCCCCAGCAAGAA...GTGGGCCAGGCTGCACCTGGGATTCCTTGCGGAATTCTGTGGGAGAAAAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154948.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTGCTTGCCTGTGCCTTCCTCAGTCTCAAGGCAGACAGGCTGTGTCAGAGGAGAGACAGGGGGCTaGATCTCCATGGGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APCLPVPSSVSRQTGCVRGETGG*ISMGGL Trigger: GAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCC...TCTGACACAGCCTGTCTGCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | CATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGGAGAGACAGGGGGCTaGATCTCCATGGGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHPRNEDKSCAGWGPVVHGETGG*ISMGGL Trigger: GAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCC...ATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | CACCTCTGGAGGGTACCAGAGCTAGGTGGATACATGGACCCAGGGGCAGAAGGAGAGCACCGACGGGGTTaGACTCAGACTGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLWRVPELGGYMDPGAEGEHRRG*TQTAEE Trigger: CTCCTCAGCAGTCTGAGTGCAACCCCGTCGGTGCTC...TCCTTCTGCCCCTGGGTCCATGTATCCACCTAGCTCTGGTACCCTCCAGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR TCA 90 bp | GATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTTGCACTCAGACTGCTaGGGAGAGACAGGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSITHGMRTNPVLAGALLHSDC*GETGGC Trigger: GCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA...CAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | CATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGAGCACCGACGGGGTTaGACTCAGACTGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHPRNEDKSCAGWGPVVHEHRRG*TQTAEE Trigger: CTCCTCAGCAGTCTGAGTGCAACCCCGTCGGTGCTC...ATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | CACCTCTGGAGGGTACCAGAGCTAGGTGGATACATGGACCCAGGGGCAGAAGGAGGGGCTGCATCTCCATaGGAGGGCTCCTGGTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLWRVPELGGYMDPGAEGGAASP*EGSWLV Trigger: TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCC...TCCTTCTGCCCCTGGGTCCATGTATCCACCTAGCTCTGGTACCCTCCAGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | ATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGAGGGGCAGCAGCTTCTaGAGCAACGACAGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITHGMRTNPVLAGALWFMRGSSF*SNDRSV Trigger: GACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCT...CATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | ATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGGCAGGCCCAGACTCTTaGGTCACCATGTACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITHGMRTNPVLAGALWFMAGPDS*VTMYSG Trigger: GCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGC...CATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | GATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGGCAGGCCCAGACTCTTaGGTCACCATGTACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSITHGMRTNPVLAGALAGPDS*VTMYSG Trigger: GCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGC...CAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | GATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGCAGTGGCTGGCTGGGTaGACAGTTCCACTAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSSITHGMRTNPVLAGALQWLAG*TVPLGT Trigger: AGTGCCTAGTGGAACTGTCCACCCAGCCAGCCACTG...CAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR TCA 90 bp | CCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTTGCACTCAGACTGCTaGGGAGAGACAGGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHDPRPERAGFWKPKSSILHSDC*GETGGC Trigger: GCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAA...AATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| CDS-3UTR GCA 90 bp | CCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTCCAGCATTTGCTCTATaGTGGGCAGCCCGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHDPRPERAGFWKPKSSIPAFAL*WAARSL Trigger: CAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGG...AATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTGTGAACTCTTTGCGGTaGGCAGGCCCAGACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHDPRPERAGFWKPKSSIVNSLR*AGPDSW Trigger: CCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCAC...AATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| CDS-3UTR TCA 90 bp | TCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGACGCCAATGGAAAAATaGTCGTCATCAGGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSITHGMRTNPVLAGALWTPMEK*SSSGSA Trigger: GGCAGAGCCTGATGACGATCATTTTTCCATTGGCGT...CCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR TCA 90 bp | CCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGGCTCCCAATATCCAGATAGCTaGCATGGAAAGCCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRNEDKSCAGWGPVVHGSQYPDS*HGKPAP Trigger: AGGAGCAGGCTTTCCATGTCAGCTATCTGGATATTG...GGAGCCATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGCATCTTAGCTGCTGCGTTACGCTTTGCCAGCTTTTTGGAAGTGCCACTGCCAGCATTTGCTCTATaGTGGGCAGCCCGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSILAAALRFASFLEVPLPAFAL*WAARSL Trigger: CAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGG...CAGTGGCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAGCTAAGATGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
||
| CDS-3UTR CCA 90 bp | CATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATCCATGGGAGGGCTCCTaGTTAGTACAGCAGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHPRNEDKSCAGWGPVVHPWEGS*LVQQME Trigger: TTCCATCTGCTGTACTAACCAGGAGCCCTCCCATGG...ATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| 3UTR CAA 72 bp | CATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTaGGGTCACCATGTACTCTGGCAAACGCCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HGELFAVSRPRL*GHHVLWQTPAF Trigger: AAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTTTCTTGCTGGGGCCCTaGCCAGTGCAGCTGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MTQGQREQGFGSQRAAFIFLLGP*PVQLVS Trigger: CGACACCAGCTGCACTGGTCAGGGCCCCAGCAAGAA...AATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACCCAGCATTTGCTCTATaGTGGGCAGCCCGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQREQGFGSQRAAFIQDPAFAL*WAARSL Trigger: CAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGG...GTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCAGAAGGAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATTGCACCACCAGCTCCTaGAGAGCACCGACGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQKEQEVKDAYPSLQWDCTTSS*RAPTGL Trigger: CAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTGCA...ATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTCCTTCTGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTGCTTGCCTGTGCCTTCCTCAGTCTCAAGGCAGACAGGCTGTGTCAGAAGAGAAAAAGAACAGTaGAGCTGGTGTCGCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: APCLPVPSSVSRQTGCVRREKEQ*SWCRQR Trigger: CCGTTGGCGACACCAGCTGCACTGTTCTTTTTCTCT...TCTGACACAGCCTGTCTGCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| CDS-3UTR GCA 90 bp | TGCATCTCCATGGGAGGGCTCCTGGTTAGTACAGCAGATGGAACAGGGGCAGCAAGAGAAAAAGAACAGTaGAGCTGGTGTCGCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: CISMGGLLVSTADGTGAAREKEQ*SWCRQR Trigger: CCGTTGGCGACACCAGCTGCACTGTTCTTTTTCTCT...TGCTGCCCCTGTTCCATCTGCTGTACTAACCAGGAGCCCTCCCATGGAGATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGCAAGGAATCCCAGGTaGAGCCTGGCCCACGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPIDSSITHGMRTNPVLAARNPR*SLAHDS Trigger: GGAATCGTGGGCCAGGCTGCACCTGGGATTCCTTGC...AGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | CCGGCAAGTCATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACGCGTCTTTCCTATTCTaGTCCCATACTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PASHGELFAVSRPRLLGHASFLF*SHTPEE Trigger: TTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGC...GTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATGACTTGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
||
| CDS-3UTR CCA 90 bp | ATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGTTCATGGGGAGCTCACGCCAATaGAAAAATGATCGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITHGMRTNPVLAGALWFMGSSRQ*KNDRHQ Trigger: CTGATGACGATCATTTTTCCATTGGCGTGAGCTCCC...CATGAACCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTGGTCACCATGTACTCTaGCAAACGCCAGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHDPRPERAGFWKPKSSIGHHVL*QTPAFL Trigger: CAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACC...AATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| CDS-3UTR GCA 90 bp | CCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGGAGAGAAAAAGAACTaGTGTCCTCCAGGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIDSSITHGMRTNPVLAGGEKKN*CPPGLV Trigger: AACCAGCCCTGGAGGACAGCAGTTCTTTTTCTCTCC...CCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| CDS-3UTR CCA 90 bp | CATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCGCGTCTTTCCTATTCTaGTCCCATACTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGELFAVSRPRLLGHHVLASFLF*SHTPEE Trigger: TTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGC...GAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAGCGTCTTTCCTATTCTaGTCCCATACTCCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELFAVSRPRLLGHHVLWQASFLF*SHTPEE Trigger: TTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGC...TTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTGGAGGGGCTGCATCTCCATaGGAGGGCTCCTGGTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MFIPYTLMTQGQREQGFGGAASP*EGSWLV Trigger: TACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCC...TCCAAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
||
| 3UTR CAA 72 bp | ACACATCACCCATCTCCCAACTCCTTCATACTTGCTTaGATCCAGTCCCCTCCATCCCCAGTCTCTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: THHPSPNSFILA*IQSPPSPVSSW Trigger: CCAACTAGAGACTGGGGATGGAGGGGACTGGATCAAAGCAAGTATGAAGGAGTTGGGAGATGGGTGATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| 3UTR CAA 72 bp | AAAAGATGCATATCCATCACTGCAGTGGGATGCTACTaGCTACCCGCCATGATCCTGAGGTACTGTAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRCISITAVGCY*LPAMILRYCRA Trigger: CGCCCTACAGTACCTCAGGATCATGGCGGGTAGCAAGTAGCATCCCACTGCAGTGATGGATATGCATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131184.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTAAACGCCAGCCTTTTTaGACCACCAGCTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPIDSSITHGMRTNPVLAKRQPF*TTSSCR Trigger: TCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTT...AGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCAGAAGGAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGATAAACGCCAGCCTTTTTaGACCACCAGCTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQKEQEVKDAYPSLQWDKRQPF*TTSSCR Trigger: TCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTT...ATCCCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTCCTTCTGCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR GCA 90 bp | TTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGCAAGGAATCCCAGGTaGAGCCTGGCCCACGATTCC | + |
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Preference number: 4 (lower is better) Translates to: LFRTPIDSSITHGMRTNPARNPR*SLAHDS Trigger: GGAATCGTGGGCCAGGCTGCACCTGGGATTCCTTGC...AGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAGTTCCACTAGGCACTaGCAGAGCCCACTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QHLFRTPIDSSITHGMRTSSTRH*QSPLRL Trigger: GAGCCTGAGTGGGCTCTGCCAGTGCCTAGTGGAACT...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | CTCACCATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTAACCATAACACACAGTaGCTGGCTGGGTGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LTMFIPYTLMTQGQREQGNHNTQ*LAGWTV Trigger: AACTGTCCACCCAGCCAGCCACTGTGTGTTATGGTT...ACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACATGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
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| CDS-3UTR CCA 90 bp | ACCCAGGGGCAGAAGGAGCAAGAAGTAAAAGATGCATATCCATCACTGCAGTGGGCTTTGCCAGCTTTTTaGAAGTGCCACTGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: TQGQKEQEVKDAYPSLQWALPAF*KCHCQS Trigger: AGATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGC...CCACTGCAGTGATGGATATGCATCTTTTACTTCTTGCTCCTTCTGCCCCTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | TTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCAGTTCCACTAGGCACTaGCAGAGCCCACTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FIQDSNRFIHHPRNEDKSSSTRH*QSPLRL Trigger: GAGCCTGAGTGGGCTCTGCCAGTGCCTAGTGGAACT...GGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | TTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTCAGTGGCTGGCTGGGTaGACAGTTCCACTAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: LFRTPIDSSITHGMRTNPQWLAG*TVPLGT Trigger: AGTGCCTAGTGGAACTGTCCACCCAGCCAGCCACTG...AGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | CTCACCATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTGCGTCTTTCCTATTCTaGTCCCATACTCCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LTMFIPYTLMTQGQREQGASFLF*SHTPEE Trigger: TTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGC...ACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACATGGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| CDS-3UTR CCA 90 bp | CAGCATTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAACCATAACACACAGTaGCTGGCTGGGTGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: QHLFRTPIDSSITHGMRTNHNTQ*LAGWTV Trigger: AACTGTCCACCCAGCCAGCCACTGTGTGTTATGGTT...TGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR TCA 90 bp | TTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTACGCCAATGGAAAAATaGTCGTCATCAGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LFRTPIDSSITHGMRTNPTPMEK*SSSGSA Trigger: GGCAGAGCCTGATGACGATCATTTTTCCATTGGCGT...AGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | TTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGGTCACCATGTACTCTaGCAAACGCCAGCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LFRTPIDSSITHGMRTNPGHHVL*QTPAFL Trigger: CAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACC...AGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR TCA 90 bp | TTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTCAATATCCAGATAGCTaGCATGGAAAGCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LFRTPIDSSITHGMRTNPQYPDS*HGKPAP Trigger: AGGAGCAGGCTTTCCATGTCAGCTATCTGGATATTG...AGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACTCCAATAGATTCATCGCTTTGCCAGCTTTTTaGAAGTGCCACTGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: QGFGSQRAAFIQDSNRFIALPAF*KCHCQS Trigger: AGATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGC...GATGAATCTATTGGAGTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
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| CDS-3UTR CCA 90 bp | TTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCGGGAGCTCACGCCAATaGAAAAATGATCGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: FIQDSNRFIHHPRNEDKSGSSRQ*KNDRHQ Trigger: CTGATGACGATCATTTTTCCATTGGCGTGAGCTCCC...GGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CAA 90 bp | CACCACCAGCTCCTGCAGAGCACCGACGGGGTTGCACTCAGACTGCTGAGGAGAGTTGGCGGCCAGCATTaGCTCTATGCTGGGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: HHQLLQSTDGVALRLLRRVGGQH*LYAGQP Trigger: GGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAAC...TCTCCTCAGCAGTCTGAGTGCAACCCCGTCGGTGCTCTGCAGGAGCTGGTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| CDS-3UTR CAA 90 bp | GAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCTGGCAAGTTGGCGGCCAGCATTaGCTCTATGCTGGGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: ELFAVSRPRLLGHHVLWQVGGQH*LYAGQP Trigger: GGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAAC...TTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| CDS-3UTR CAA 90 bp | GAGCCCAGAGCCCCTAGAGAGCCCACGGAGCAACTGCGAAGGGATAGGATCTTTAAAGGTGAAATTAGGTaGATGGGCTTGGCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: EPRAPREPTEQLRRDRIFKGEIR*MGLALG Trigger: GCCGAGGGCCAAGCCCATCAACCTAATTTCACCTTT...AAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000154948.8 |
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| CDS-3UTR CAA 90 bp | TCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGTGGCGCTTTGCCAGCTTTTaGGAAGTGCCACTGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: SSITHGMRTNPVLAGALWRFASF*EVPLPI Trigger: GATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGCG...CCACAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CAA 90 bp | ACAGCAGATGGAACAGGGGCAGCAGCTTCTGCAGCAACGACAGGAGTGTCCTCAAAAGGTGAAATTAGGTaGATGGGCTTGGCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: TADGTGAAASAATTGVSSKGEIR*MGLALG Trigger: GCCGAGGGCCAAGCCCATCAACCTAATTTCACCTTT...TGAGGACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCTGTTCCATCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 |
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| CDS-3UTR CAA 90 bp | GATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGGCCCTGCGCTTTGCCAGCTTTTaGGAAGTGCCACTGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: DSSITHGMRTNPVLAGALRFASF*EVPLPI Trigger: GATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGCG...CAGGGCCCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CAA 90 bp | CATGGTGAACTCTTTGCGGTGAGCAGGCCCAGACTCTTGGGTCACCATGTACTCAAAGGTGAAATTAGGTaGATGGGCTTGGCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: HGELFAVSRPRLLGHHVLKGEIR*MGLALG Trigger: GCCGAGGGCCAAGCCCATCAACCTAATTTCACCTTT...GAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCACCGCAAAGAGTTCACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131184.8 ENSMUST00000149200.8 ENSMUST00000154948.8 |
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| CDS-3UTR CAA 90 bp | CCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCTGTGCTGGCTGGGCTGCTGCGTTACGCTTaGCCAGCTTTTTGGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: PIDSSITHGMRTNPVLAGLLRYA*PAFWKC Trigger: GCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAG...CCCAGCCAGCACAGGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACTCCAATAGATTCATCGTTGGCGGCCAGCATTaGCTCTATGCTGGGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: QGFGSQRAAFIQDSNRFIVGGQH*LYAGQP Trigger: GGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAAC...GATGAATCTATTGGAGTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| CDS-3UTR CAA 90 bp | CAAGGCCAGAGAGAGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACATTAGGTTGATGGGCTaGGCCCTCGGCTTTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QGQREQGFGSQRAAFIQDIRLMG*ALGFEK Trigger: CTTCTCAAAGCCGAGGGCCAAGCCCATCAACCTAAT...GTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCTCTCTCTGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| CDS-3UTR CAA 90 bp | CTCACCATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTCTGCTGCGTTACGCTTaGCCAGCTTTTTGGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LTMFIPYTLMTQGQREQGLLRYA*PAFWKC Trigger: GCACTTCCAAAAAGCTGGCAAAGCGTAACGCAGCAG...ACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACATGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
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| CDS-3UTR CAA 90 bp | ACCATGTTTATTCCTTATACCCTCATGACCCAAGGCCAGAGAGAGCAGGGTTTTATTAGGTTGATGGGCTaGGCCCTCGGCTTTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: TMFIPYTLMTQGQREQGFIRLMG*ALGFEK Trigger: CTTCTCAAAGCCGAGGGCCAAGCCCATCAACCTAAT...AAAACCCTGCTCTCTCTGGCCTTGGGTCATGAGGGTATAAGGAATAAACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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| CDS-3UTR CAA 90 bp | AGCAGGGTTTTGGAAGCCAAAGAGCAGCATTTATTCAGGACTCCAATAGATTCAAGCAGGCCCAGACTCTaGGGTCACCATGTACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SRVLEAKEQHLFRTPIDSSRPRL*GHHVLW Trigger: CCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCT...TGAATCTATTGGAGTCCTGAATAAATGCTGCTCTTTGGCTTCCAAAACCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023813.9 |
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| CDS-3UTR CAA 90 bp | TTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCAGCAGGCCCAGACTCTaGGGTCACCATGTACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FIQDSNRFIHHPRNEDKSSRPRL*GHHVLW Trigger: CCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCT...GGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000100168.10 |
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| CDS-3UTR CAA 90 bp | TTTATTCAGGACTCCAATAGATTCATCCATCACCCACGGAATGAGGACAAATCCAAAGGTGAAATTAGGTaGATGGGCTTGGCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: FIQDSNRFIHHPRNEDKSKGEIR*MGLALG Trigger: GCCGAGGGCCAAGCCCATCAACCTAATTTCACCTTT...GGATTTGTCCTCATTCCGTGGGTGATGGATGAATCTATTGGAGTCCTGAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023813.9 ENSMUST00000131184.8 |
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