Pregenerated sensors for TAPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046985Ensembl transcript IDs: ENSMUST00000055128.12, ENSMUST00000197266.5, ENSMUST00000199374.5
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTaGTTGGCCAGGTGCTGGAAGCAGCACTGCTGTTGGCCACGCAGG | + |
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Preference number: 1 (lower is better) Translates to: DDLEAQADEGKELLQ*LARCWKQHCCWPRR Trigger: CCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | GCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAGGTaGTGGAAGCAGCACTGCTGTTGGCCACGCAGGAGGAAGTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: AQADEGKELLQCLAR*WKQHCCWPRRRKCS Trigger: TGAACACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR CCA 90 bp | ATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTaGCCAGGTGCTGGAAGCAGCACTGCTGTTGGCCACGCAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: IWKPRLTKERSFCSA*PGAGSSTAVGHAGG Trigger: TCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | CCTGAAGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTaGCGAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAGGTGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: PEEALRRTRRSGSPG*RRKGASAVLGQVLE Trigger: TTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR CCA 90 bp | GAGCTTCTGCAGTGCTTGGCCAGGTGCTGGAAGCAGCACTGCTGTTaGCCACGCAGGAGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: ELLQCLARCWKQHCC*PRRRKCSSVSIQSQ Trigger: CTGACTCTGGATGCTGACACTTGAACACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR CCA 90 bp | CAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAGGTGCTaGAAGCAGCACTGCTGTTGGCCACGCAGGAGGAAGTGTTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: QADEGKELLQCLARC*KQHCCWPRRRKCSS Trigger: ACTTGAACACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | TGGCTGGTGACGGAGGCAGACAGGTTTTCTTCTGTGGAAAGGCCTTaGGAGGGCTTGCCCTTGCTCTGGGATTTGCTGGAGGGTTTTCCG | + |
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Preference number: 1 (lower is better) Translates to: WLVTEADRFSSVERP*EGLPLLWDLLEGFP Trigger: CGGAAAACCCTCCAGCAAATCCCAGAGCAAGGGCAAGCCCTCTCAAGGCCTTTCCACAGAAGAAAACCTGTCTGCCTCCGTCACCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | AGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTaGTCCGTGATCTGCCCTTCTGCAAGGCCACATTACTGGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SVQVSASRVRARGHR*SVICPSARPHYWKK Trigger: TTTCTTCCAGTAATGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | AAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCCGTaGTCTGCCCTTCTGCAAGGCCACATTACTGGAAGAAAGATACTA | + |
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Preference number: 1 (lower is better) Translates to: KCQHPESGPEATAAP*SALLQGHITGRKIL Trigger: TAGTATCTTTCTTCCAGTAATGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | ATAGCAGATTACCAAGATGACGCCCTTCAAAATGTCACACACCTGTaGGGGCTGAAGCAGACGTCGGTCCCACAAGGAGTCCCTGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: IADYQDDALQNVTHL*GLKQTSVPQGVPVP Trigger: TGGCACAGGGACTCCTTGTGGGACCGACGTCTGCTTCAGCCCGCACAGGTGTGTGACATTTTGAAGGGCGTCATCTTGGTAATCTGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197266.5 |
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| 3UTR GCA 90 bp | GTGAGGGTTTCCTCCCCACACAGAACAGACCCACAGGCAGACAAATaGATTTTACAAGCCCAGCAAGGTGACACTGCTCAATCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VRVSSPHRTDPQADK*ILQAQQGDTAQSAG Trigger: CCCAGCAGATTGAGCAGTGTCACCTTGCTGGGCTTGTAAAATGCATTTGTCTGCCTGTGGGTCTGTTCTGTGTGGGGAGGAAACCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | GAACAGAAAGATACACCTAGGTCGTGCTCTTGTTCTGACCAGGGCTaGGTTTGGCAAAGCTTTTTCCACACGGCTCCTGGTTTCCATGGA | + |
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Preference number: 1 (lower is better) Translates to: EQKDTPRSCSCSDQG*VWQSFFHTAPGFHG Trigger: TCCATGGAAACCAGGAGCCGTGTGGAAAAAGCTTTGCCAAACGCAGCCCTGGTCAGAACAAGAGCACGACCTAGGTGTATCTTTCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR CCA 90 bp | AAAGATACACCTAGGTCGTGCTCTTGTTCTGACCAGGGCTGCGTTTaGCAAAGCTTTTTCCACACGGCTCCTGGTTTCCATGGACACTCT | + |
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Preference number: 1 (lower is better) Translates to: KDTPRSCSCSDQGCV*QSFFHTAPGFHGHS Trigger: AGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAAAAGCTTTGCCAAACGCAGCCCTGGTCAGAACAAGAGCACGACCTAGGTGTATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | CGGAAACAGAAAACTCAAGCGGAACAGAAAGATACACCTAGGTCGTaGTCTTGTTCTGACCAGGGCTGCGTTTGGCAAAGCTTTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: RKQKTQAEQKDTPRS*SCSDQGCVWQSFFH Trigger: GTGGAAAAAGCTTTGCCAAACGCAGCCCTGGTCAGAACAAGAGCACGACCTAGGTGTATCTTTCTGTTCCGCTTGAGTTTTCTGTTTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | TTAAAGCAAAGCCAGGTCACACTGCACTTGTGCCTTTTACTCTGTTaGCATTGCTCTGTGCCTTTTATTGTCACTGGGCCCGTGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: LKQSQVTLHLCLLLC*HCSVPFIVTGPVSH Trigger: GTGTGACACGGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGCAGTGTGACCTGGCTTTGCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | TCCTGTGTTATGTCCTTCTCATCACCATCTGGGGTTGTCAGGAACTaGTCAGAATTGCTAGTCACGAGTAAAGGTATGACGTTTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SCVMSFSSPSGVVRN*SELLVTSKGMTFSF Trigger: GAAAGAAAACGTCATACCTTTACTCGTGACTAGCAATTCTGATCAGTTCCTGACAACCCCAGATGGTGATGAGAAGGACATAACACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR GCA 90 bp | TTTGGTGATAAAGGCATGCTTTACAATATCCACAGCAATTTCGGATaGAATCACCATACAGACGTCAGGAAACAACACCCAGAGATGATC | + |
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Preference number: 1 (lower is better) Translates to: FGDKGMLYNIHSNFG*NHHTDVRKQHPEMI Trigger: GATCATCTCTGGGTGTTGTTTCCTGACGTCTGTATGGTGATTGCATCCGAAATTGCTGTGGATATTGTAAAGCATGCCTTTATCACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | CATCTCATTAGTCACAAACTCAGTCAATCCGGTTCCCGCAAATTGTaGACCTGTCTATTTCTAACAAGTCTTTCTTTGAGGATCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HLISHKLSQSGSRKL*TCLFLTSLSLRICA Trigger: AGCACAGATCCTCAAAGAAAGACTTGTTAGAAATAGACAGGTTCACAATTTGCGGGAACCGGATTGACTGAGTTTGTGACTAATGAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR TCA 90 bp | GGAGGATTAAATAGCTTCTCTTCCATTTTGGCTTCCTTCACGTATTaGCAGGACTTTCCCAACAGCACAATGCTATTAAGTATTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: GGLNSFSSILASFTY*QDFPNSTMLLSIFK Trigger: CTTGAAAATACTTAATAGCATTGTGCTGTTGGGAAAGTCCTGTCAATACGTGAAGGAAGCCAAAATGGAAGAGAAGCTATTTAATCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACATGTGTGGAGACAGTCTaGGGCTGGAAAGGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: SQGQRPPLLRDLPFCKATCVETV*GWKGNS Trigger: TGAGTTCCCTTTCCAGCCTCAGACTGTCTCCACACA...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR CAA 90 bp | GGAGCTTCTGCAGTGCTTGGCCAGGTGCTGGAAGCAGCACTGCTGTaGGCCACGCAGGAGGAAGTGTTCAAGTGTCAGCATCCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GASAVLGQVLEAALL*ATQEEVFKCQHPES Trigger: TGACTCTGGATGCTGACACTTGAACACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | ACGGTCGGTCGGTCATGTGAGGGTTTCCTCCCCACACAGAACAGACCCACAGGCGGTGTGTCCTTATCCTaGAGAGGCCTTGAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: TVGRSCEGFLPTQNRPTGGVSLS*RGLEEN Trigger: GTTCTCCTCAAGGCCTCTTCAGGATAAGGACACACC...GCCTGTGGGTCTGTTCTGTGTGGGGAGGAAACCCTCACATGACCGACCGACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGTCGGTCGGTCATGTGAGGGTTTCCTCCCCACACAGAACAGACCCACAGGCAAGGAAAGGAGCTTCTaGAGTGCTTGGCCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TVGRSCEGFLPTQNRPTGKERSF*SAWPGA Trigger: AGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTT...GCCTGTGGGTCTGTTCTGTGTGGGGAGGAAACCCTCACATGACCGACCGACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGTCGGTCGGTCATGTGAGGGTTTCCTCCCCACACAGAACAGACCCACAGGCCGTGATCTGCCCTTCTaGAAGGCCACATTACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TVGRSCEGFLPTQNRPTGRDLPF*KATLLE Trigger: TTCCAGTAATGTGGCCTTGCAGAAGGGCAGATCACG...GCCTGTGGGTCTGTTCTGTGTGGGGAGGAAACCCTCACATGACCGACCGACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCGGCTTGCCCTTGCTCTaGGATTTGCTGGAGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLGLPLL*DLLEGF Trigger: AAAACCCTCCAGCAAATCCCAGAGCAAGGGCAAGCC...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACACTGTGCCCAAATATTTaGATGAGAGCTGAGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SQGQRPPLLRDLPFCKATLCPNI*MRAEFQ Trigger: CTGAAACTCAGCTCTCATGCAAATATTTGGGCACAG...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCACAGGTTTTCTTCTGTaGAAAGGCCTTGAGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLTGFLL*KGLERA Trigger: AGCCCTCTCAAGGCCTTTCCACAGAAGAAAACCTGT...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | CGTGCTCTTGTTCTGACCAGGGCTGCGTTTGGCAAAGCTTTTTCCACACGGCTCGCTTCCTTCACGTATTaGCAGGACTTTCCCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: RALVLTRAAFGKAFSTRLASFTY*QDFPNS Trigger: GCTGTTGGGAAAGTCCTGTCAATACGTGAAGGAAGC...GAGCCGTGTGGAAAAAGCTTTGCCAAACGCAGCCCTGGTCAGAACAAGAGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCCACGTTGTAGTTAAGTaGCCTTCTGTTCTGACTAGC | + |
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Preference number: 2 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLHVVVK*PSVLTS Trigger: GCTAGTCAGAACAGAAGGCCACTTAACTACAACGTG...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACATATAAAGTAAATGACTaGGCCAAGAGCTCACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SQGQRPPLLRDLPFCKATYKVND*AKSSLF Trigger: AAACAGTGAGCTCTTGGCCCAGTCATTTACTTTATA...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTGGCCACGCAGGAGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCAGCTTGATGACAGACTaGCCTCTTATCAGGTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: CCWPRRRKCSSVSIQSQGSLMTD*PLIRWY Trigger: GTACCACCTGATAAGAGGCCAGTCTGTCATCAAGCT...GCCCTGACTCTGGATGCTGACACTTGAACACTTCCTCCTGCGTGGCCAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCGGTCAAAAGCAAGGCTaGCTCTATATTCACTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLGQKQG*LYIHCR Trigger: TCTACAGTGAATATAGAGCCAGCCTTGCTTTTGACC...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGTCACACTGCACTTGTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTGTGTGGAGACAGTCTaGGGCTGGAAAGGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: ARSHCTCAFYSVDIALCLCVETV*GWKGNS Trigger: TGAGTTCCCTTTCCAGCCTCAGACTGTCTCCACACA...AAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGCAGTGTGACCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGCATGATAGTAAGCAGTaGCTTGTTGTGAGAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: RGLEENPTIWKPRLTKERHDSKQ*LVVRVK Trigger: TTTAACTCTCACAACAAGTCACTGCTTACTATCATG...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | TACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGAGCTTCTGCAGTGCTTaGCCAGGTGCTGGAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YSNQNKTQQTSLALATAMSFCSA*PGAGSS Trigger: GCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCT...CATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAGAACAGCGCGGAAACAGAAAACTCAAGCGGAACAGAAAGATACACCTAAGCTTCTGCAGTGCTTaGCCAGGTGCTGGAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FREQRGNRKLKRNRKIHLSFCSA*PGAGSS Trigger: GCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCT...TAGGTGTATCTTTCTGTTCCGCTTGAGTTTTCTGTTTCCGCGCTGTTCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | TCATTAGTCACAAACTCAGTCAATCCGGTTCCCGCAAATTGTGAACCTGTCTATTCTGTGGAAAGGCCTTaGGAGGGCTTGCCCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLVTNSVNPVPANCEPVYSVERP*EGLPLL Trigger: GAGCAAGGGCAAGCCCTCTCAAGGCCTTTCCACAGA...ATAGACAGGTTCACAATTTGCGGGAACCGGATTGACTGAGTTTGTGACTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | AACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGCAATGGAAGGAAAGGAGCTTCTaGAGTGCTTGGCCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: NQNKTQQTSLALATAMQWKERSF*SAWPGA Trigger: AGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTT...CCATTGCATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCTTCTTTGAGGATCTGTaGTTTAACTCAGAATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLFFEDL*FNSEFS Trigger: GGAAAATTCTGAGTTAAAGCACAGATCCTCAAAGAA...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTGGGCCCGTAGTGGCCTTCTGTTCTaGCTAGCTCAGATGTATTGC | + |
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Preference number: 2 (lower is better) Translates to: VPFTLLTLLCAFYCHWARSGLLF*LAQMYC Trigger: GCAATACATCTGAGCTAGTCAGAACAGAAGGCCACT...ACGGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCCAGTAGAGAGCATCTAAGATATCTTGTCCAAACGAGGAGAACAGACCGTGATCTGCCCTTCTaGAAGGCCACATTACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: WLSSREHLRYLVQTRRTDRDLPF*KATLLE Trigger: TTCCAGTAATGTGGCCTTGCAGAAGGGCAGATCACG...GTCTGTTCTCCTCGTTTGGACAAGATATCTTAGATGCTCTCTACTGGACAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCTTCTGTGGAAAGGCCTTGAGAGGGCTTGCCCTTGCTCTGGGATTTGCTACTGTAGTCTGTGTATaGATTTTTCTGTCGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VFFCGKALRGLALALGFATVVCV*IFLSAA Trigger: AGCAGCCGACAGAAAAATGCATACACAGACTACAGT...AGCAAATCCCAGAGCAAGGGCAAGCCCTCTCAAGGCCTTTCCACAGAAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCCACACGGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTGGGGTTGTCAGGAACTaGTCAGAATTGCTAGTCACG | + |
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Preference number: 2 (lower is better) Translates to: FPHGSWFPWTLSFGKKNSGVVRN*SELLVT Trigger: CGTGACTAGCAATTCTGATCAGTTCCTGACAACCCC...ACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTGGGCCCGTCAATGCTTTGGCAGATaGAGTCAAGTCTGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VPFTLLTLLCAFYCHWARQCFGR*SQVWKE Trigger: CTCTTTCCAGACTTGACTCCATCTGCCAAAGCATTG...ACGGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCAATGTGTGCTCTTTTCCTTTCTTTCGGCTCTGTGGCTGTCCAGTAGAGAGTCAGGTGGTACATCATaGAGTAGTCAACATAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LQCVLFSFLSALWLSSRESGGTS*SSQHSA Trigger: TGCACTATGTTGACTACTCCATGATGTACCACCTGA...CTCTCTACTGGACAGCCACAGAGCCGAAAGAAAGGAAAAGAGCACACATTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197266.5 ENSMUST00000199374.5 |
||
| 3UTR CAA 90 bp | CACGTTGTAGTTAAGTGGCCTTCTGTTCTGACTAGCTCAGATGTATaGCCAAGGATGACTCTGGTGGTAAGAACGTCATCTGGACTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HVVVKWPSVLTSSDV*PRMTLVVRTSSGLR Trigger: TCTAAGTCCAGATGACGTTCTTACCACCAGAGTCATCCTTGGCAATACATCTGAGCTAGTCAGAACAGAAGGCCACTTAACTACAACGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | GCACTTGTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTGGAGTGGCCTTCTGTTCTaGCTAGCTCAGATGTATTGC | + |
|
Preference number: 2 (lower is better) Translates to: ALVPFTLLTLLCAFYCHWSGLLF*LAQMYC Trigger: GCAATACATCTGAGCTAGTCAGAACAGAAGGCCACT...CCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | TATAAAATTAGTACTGAATGCCATTATGACAGAAGTGAGTATCATCCACACTCCGGTCGGTCGGTCATGTaGGGGTTTCCTCCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: YKISTECHYDRSEYHPHSGRSVM*GFPPHT Trigger: TGTGTGGGGAGGAAACCCTCACATGACCGACCGACC...GGAGTGTGGATGATACTCACTTCTGTCATAATGGCATTCAGTACTAATTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGCTTCCTGGCTTTACAAGGCATAAATATATAGTATCTCCAACAGCTATCGGTCGGTCGGTCATGTaGGGGTTTCCTCCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: KLLPGFTRHKYIVSPTAIGRSVM*GFPPHT Trigger: TGTGTGGGGAGGAAACCCTCACATGACCGACCGACC...GATAGCTGTTGGAGATACTATATATTTATGCCTTGTAAAGCCAGGAAGCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGGACTTAGATGTAGCAACTTGTCAATGCTTTGGCAGATGGAGTCAAGTCTGGACAGCCATGAAGAAGTaGGGAATGACTCCAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LDLDVATCQCFGRWSQVWTAMKK*GMTPMC Trigger: ACACATTGGAGTCATTCCTCACTTCTTCATGGCTGT...CCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR CAA 90 bp | GCAGGAATAACATCTTTATCTCAGATGAAAACCCCAGAGCACCTTTaGGTTGCTAGTTACAGTGTCCCAAACACTCTACTTACGGTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: AGITSLSQMKTPEHL*VASYSVPNTLLTVG Trigger: ACCGACCGTAAGTAGAGTGTTTGGGACACTGTAACTAGCAACCAAAAGGTGCTCTGGGGTTTTCATCTGAGATAAAGATGTTATTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAATGTGTGCTCTTTTCCTTTCTTTCGGCTCTGTGGCTGTCCAGTAGAGAGCAACATAGTGCATCATaGAATAGCAGATTACCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LQCVLFSFLSALWLSSREQHSAS*NSRLPR Trigger: TCTTGGTAATCTGCTATTTCATGATGCACTATGTTG...CTCTCTACTGGACAGCCACAGAGCCGAAAGAAAGGAAAAGAGCACACATTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197266.5 ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGGACTTAGATGTAGCAACTTGTCAATGCTTTGGCAGATGGAGTCAAGTCTGGAACAACACCCAGAGATaGTCTGGATTCCAAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LDLDVATCQCFGRWSQVWNNTQR*SGFQEN Trigger: GTTTTCTTGGAATCCAGATCATCTCTGGGTGTTGTT...CCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTTACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTAGATGGAGTCAAGTCTaGAAAGAGTGTGTGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CYSNQNKTQQTSLALATARWSQV*KECVET Trigger: TGTCTCCACACACTCTTTCCAGACTTGACTCCATCT...AGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCCATTATGACAGAAGTGAGTATCATCCACACTCCCAAGAGCATCTGCAAAGGAACTTGTCAATGCTTTaGCAGATGGAGTCAAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CHYDRSEYHPHSQEHLQRNLSML*QMESSL Trigger: CAGACTTGACTCCATCTGCCAAAGCATTGACAAGTT...CCTTTGCAGATGCTCTTGGGAGTGTGGATGATACTCACTTCTGTCATAATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAATTAGTACTGAATGCCATTATGACAGAAGTGAGTATCATCCACACTCCAAGGAGCTTCTGCAGTaGTTGGCCAGGTGCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YKISTECHYDRSEYHPHSKELLQ*LARCWK Trigger: CTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTT...GGAGTGTGGATGATACTCACTTCTGTCATAATGGCATTCAGTACTAATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | TACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGTTTCTCATAGGACGCTaGTATTCACCACGTTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: YSNQNKTQQTSLALATAMFLIGR*YSPRCS Trigger: ACTACAACGTGGTGAATAGCAGCGTCCTATGAGAAA...CATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | TGCCATTATGACAGAAGTGAGTATCATCCACACTCCCAAGAGCATCTGCAAAGGCTCCTGAATCTCAAATaGATAAGCCAAAGCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: CHYDRSEYHPHSQEHLQRLLNLK*ISQSIQ Trigger: TTGGATGCTTTGGCTTATGCATTTGAGATTCAGGAG...CCTTTGCAGATGCTCTTGGGAGTGTGGATGATACTCACTTCTGTCATAATGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | TACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGACTCCCAAGAGCATCTaGAAAGGAAATGCAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: YSNQNKTQQTSLALATAMTPKSI*KGNAIF Trigger: GAAGATTGCATTTCCTTTGCAGATGCTCTTGGGAGT...CATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAAATAGAAGAGTATGACACAGGCGTAGGACAGGATTCCTTGCACTTTAATCACAGCAATTTCGGATaGAATCACCATACAGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: PKIEEYDTGVGQDSLHFNHSNFG*NHHTDV Trigger: GACGTCTGTATGGTGATTGCATCCGAAATTGCTGTG...ATTAAAGTGCAAGGAATCCTGTCCTACGCCTGTGTCATACTCTTCTATTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCCATTATGACAGAAGTGAGTATCATCCACACTCCCAAGAGCATCTGCAAAGGCACTGCTCAATCTGCTaGGAATACTTTAAAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CHYDRSEYHPHSQEHLQRHCSIC*EYFKTV Trigger: AACAGTTTTAAAGTATTCCCAGCAGATTGAGCAGTG...CCTTTGCAGATGCTCTTGGGAGTGTGGATGATACTCACTTCTGTCATAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CCA 90 bp | TCATTAGTCACAAACTCAGTCAATCCGGTTCCCGCAAATTGTGAACCTGTCTATGCTTCTCTTCCATTTTaGCTTCCTTCACGTATTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLVTNSVNPVPANCEPVYASLPF*LPSRID Trigger: GTCAATACGTGAAGGAAGCCAAAATGGAAGAGAAGC...ATAGACAGGTTCACAATTTGCGGGAACCGGATTGACTGAGTTTGTGACTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR TCA 90 bp | CATCTAAGATATCTTGTCCAAACGAGGAGAACAGACGATCAGCTACCTCTAGCACAACATAGTGCATCATaGAATAGCAGATTACCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HLRYLVQTRRTDDQLPLAQHSAS*NSRLPR Trigger: TCTTGGTAATCTGCTATTTCATGATGCACTATGTTG...TGCTAGAGGTAGCTGATCGTCTGTTCTCCTCGTTTGGACAAGATATCTTAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197266.5 ENSMUST00000199374.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTAGTCTGTGTATGCATTTTTCTGTCGGCTGCTAACAAGGTCAAAAGCAAGTTCACTGTAGACATCTaGAGTGATGTCATTGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: TVVCVCIFLSAANKVKSKFTVDI*SDVIEF Trigger: AAATTCAATGACATCACTGCAGATGTCTACAGTGAA...CTTGCTTTTGACCTTGTTAGCAGCCGACAGAAAAATGCATACACAGACTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACAGAGCTTCTGCAGTGCTaGGCCAGGTGCTGGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQGQRPPLLRDLPFCKATELLQC*ARCWKQ Trigger: CTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTC...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | GGCCTTGAGAGGGCTTGCCCTTGCTCTGGGATTTGCTaGAGGGTTTTCCGGGTGTGCTGGCTGGAGGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GLERACPCSGIC*RVFRVCWLEED Trigger: ATCCTCCTCCAGCCAGCACACCCGGAAAACCCTCCAGCAAATCCCAGAGCAAGGGCAAGCCCTCTCAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGGAAGCAGCACTGCTGTaGGCCACGCAGGAGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RGLEENPTIWKPRLTKEREAALL*ATQEEV Trigger: CACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTC...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR TCA 72 bp | GCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTaGCGAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALRRTRRSGSPG*RRKGASAVLGQ Trigger: CTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR GCA 72 bp | AAAGGCCTTGAGAGGGCTTGCCCTTGCTCTGGGATTTaGTGGAGGGTTTTCCGGGTGTGCTGGCTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KGLERACPCSGI*WRVFRVCWLEE Trigger: CTCCTCCAGCCAGCACACCCGGAAAACCCTCCAGCAAATCCCAGAGCAAGGGCAAGCCCTCTCAAGGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | GAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAGGTGCTaGAAGCAGCACTGCTGTTGGCCACGCAGGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EGKELLQCLARC*KQHCCWPRRRK Trigger: CTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACAACCCCAGAGCACCTTTaGGTTGCTAGTTACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SQGQRPPLLRDLPFCKATTPEHL*VASYSV Trigger: GACACTGTAACTAGCAACCAAAAGGTGCTCTGGGGT...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR GCA 72 bp | ATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTaGAGTGCTTGGCCAGGTGCTGGAAGCAGCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IWKPRLTKERSF*SAWPGAGSSTA Trigger: AGCAGTGCTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGACCCCAGAGCACCTTTaGGTTGCTAGTTACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGLEENPTIWKPRLTKERTPEHL*VASYSV Trigger: GACACTGTAACTAGCAACCAAAAGGTGCTCTGGGGT...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTCGGTCGGTCATGTGAGGGTTTCCTCCCCACACAGAACAGACCCACAGGCGTGCCTTTTACTCTGTaGACATTGCTCTGTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TVGRSCEGFLPTQNRPTGVPFTL*TLLCAF Trigger: AAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCAC...GCCTGTGGGTCTGTTCTGTGTGGGGAGGAAACCCTCACATGACCGACCGACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | CCTAGGTCGTGCTCTTGTTCTGACCAGGGCTGCGTTTaGCAAAGCTTTTTCCACACGGCTCCTGGTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PRSCSCSDQGCV*QSFFHTAPGFH Trigger: ATGGAAACCAGGAGCCGTGTGGAAAAAGCTTTGCCAAACGCAGCCCTGGTCAGAACAAGAGCACGACCTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | CCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGCAACTTGTCAATGCTTaGGCAGATGGAGTCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTIWKPRLTKERSFCSAWQLVNA*ADGVKS Trigger: AGACTTGACTCCATCTGCCAAAGCATTGACAAGTTG...CCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | ACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTaGGCCCGTGTCACACAGCTCACACTCTGCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLTLLCAFYCH*ARVTQLTLCPE Trigger: CTCAGGGCAGAGTGTGAGCTGTGTGACACGGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTGAAGCAGCACTGCTGTaGGCCACGCAGGAGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CYSNQNKTQQTSLALATAEAALL*ATQEEV Trigger: CACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTC...AGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | CCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGTTTACTCTGTTGACATaGCTCTGTGCCTTTTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTIWKPRLTKERSFCSAWFTLLT*LCAFYC Trigger: ACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAA...CCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR TCA 72 bp | AGCCAGGTCACACTGCACTTGTGCCTTTTACTCTGTTaGCATTGCTCTGTGCCTTTTATTGTCACTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SQVTLHLCLLLC*HCSVPFIVTGP Trigger: GGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGCAGTGTGACCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTTTAAAAGTGGAGCTTCTGCAGTGCTaGGCCAGGTGCTGGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSWFPWTLSFGKKNSLKVELLQC*ARCWKQ Trigger: CTGCTTCCAGCACCTGGCCAAGCACTGCAGAAGCTC...CACTTTTAAACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTGGGCCCGTCATCACCATCTGGGGTaGTCAGGAACTGATCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPFTLLTLLCAFYCHWARHHHLG*SGTDQN Trigger: ATTCTGATCAGTTCCTGACAACCCCAGATGGTGATG...ACGGGCCCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | GACTTAGATGTAGCAACTTGTCAATGCTTTGGCAGATaGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DLDVATCQCFGR*SQVWKECVETV Trigger: GACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | TACTCAAACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGGTGCCTTTTACTCTGTaGACATTGCTCTGTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YSNQNKTQQTSLALATAMVPFTL*TLLCAF Trigger: AAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCAC...CATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTTTGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | TCATCTGGACTTAGATGTAGCAACTTGTCAATGCTTTaGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSGLRCSNLSML*QMESSLERVCG Trigger: TCCACACACTCTTTCCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | TTCTCAGTGACACATGACCTTTATAAAGTAAATGACTaGGCCAAGAGCTCACTGTTTCTCATAGGACGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSVTHDLYKVND*AKSSLFLIGRC Trigger: GCAGCGTCCTATGAGAAACAGTGAGCTCTTGGCCCAGTCATTTACTTTATAAAGGTCATGTGTCACTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR TCA 72 bp | ACAGGCAGACAAATGCATTTTACAAGCCCAGCAAGGTaGCACTGCTCAATCTGCTGGGAATACTTTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TGRQMHFTSPAR*HCSICWEYFKT Trigger: AGTTTTAAAGTATTCCCAGCAGATTGAGCAGTGTCACCTTGCTGGGCTTGTAAAATGCATTTGTCTGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR GCA 72 bp | AAAGGCATGCTTTACAATATCCACAGCAATTTCGGATaGAATCACCATACAGACGTCAGGAAACAACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KGMLYNIHSNFG*NHHTDVRKQHP Trigger: TGGGTGTTGTTTCCTGACGTCTGTATGGTGATTGCATCCGAAATTGCTGTGGATATTGTAAAGCATGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR TCA 72 bp | AGTCACAAACTCAGTCAATCCGGTTCCCGCAAATTGTaGACCTGTCTATTTCTAACAAGTCTTTCTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHKLSQSGSRKL*TCLFLTSLSLR Trigger: CCTCAAAGAAAGACTTGTTAGAAATAGACAGGTTCACAATTTGCGGGAACCGGATTGACTGAGTTTGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTTTAAAAGTGCTTAGATGTAGCAACTaGTCAATGCTTTGGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GSWFPWTLSFGKKNSLKVLRCSN*SMLWQM Trigger: CATCTGCCAAAGCATTGACAAGTTGCTACATCTAAG...CACTTTTAAACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR GCA 72 bp | CCAGGATACAGCAAACCATTTAAAATTTGCCATCTGTaGCCAAATATTTGCATGAGAGCTGAGTTTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGYSKPFKICHL*PNICMRAEFQK Trigger: CTTCTGAAACTCAGCTCTCATGCAAATATTTGGGCACAGATGGCAAATTTTAAATGGTTTGCTGTATCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| 3UTR CCA 72 bp | TTGGCAAAGCTTTTTCCACACGGCTCCTGGTTTCCATaGACACTCTCTTTCGGTAAAAAGAATAGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAKLFPHGSWFP*TLSFGKKNSLK Trigger: TTTTAAACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAAAAGCTTTGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACAATATTCCAAAGAACATaGGCTGCGCGGCCGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGQRPPLLRDLPFCKATIFQRT*AARPRR Trigger: GCGCCGCGGCCGCGCAGCTCATGTTCTTTGGAATAT...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAAACCCCATCCTCCGTaGCACCGAGTCACTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLEENPTIWKPRLTKERKPHPP*HRVTVV Trigger: GACTACAGTGACTCGGTGGCACGGAGGATGGGGTTT...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR GCA 90 bp | GAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGGCCTTGAGAGGGCTTaGCCTTGCTCTGGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENPTIWKPRLTKERSFCSGLERA*PCSGIC Trigger: GCAAATCCCAGAGCAAGGGCAAGCCCTCTCAAGGCC...ACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | CCATTTTTAGCAAGTGTCCTGGCACCCAGAATTTGTGGCCCGGGGCCTGACATCTCTGTGGAAAGGCCTTaGGAGGGCTTGCCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLASVLAPRICGPGPDISVERP*EGLPLL Trigger: GAGCAAGGGCAAGCCCTCTCAAGGCCTTTCCACAGA...GATGTCAGGCCCCGGGCCACAAATTCTGGGTGCCAGGACACTTGCTAAAAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | AGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCAGAGGCCACCGCTGCTCACAGCCATGAAGAAGTaGGGAATGACTCCAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKCSSVSIQSQGQRPPLLTAMKK*GMTPMC Trigger: ACACATTGGAGTCATTCCTCACTTCTTCATGGCTGT...GAGCAGCGGTGGCCTCTGGCCCTGACTCTGGATGCTGACACTTGAACACTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR GCA 90 bp | TGGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTCTGAGGCTGGAAAATGTCACACACCTGTaGGGGCTGAAGCAGACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WQMESSLERVCGDSLRLENVTHL*GLKQTS Trigger: CGACGTCTGCTTCAGCCCGCACAGGTGTGTGACATT...TTCCAGCCTCAGACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGCCAGGTGCTGGACTGTAGTCTGTGTATaGATTTTTCTGTCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAQADEGKELLQCLARCWTVVCV*IFLSAA Trigger: AGCAGCCGACAGAAAAATGCATACACAGACTACAGT...CCAGCACCTGGCCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGGAGACAGTCTGAGGCTGGAAAGGGAACTCATGGTAGAAGCGTCACAGGGCTTGCCCTTGCTCTaGGATTTGCTGGAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCGDSLRLERELMVEASQGLPLL*DLLEGF Trigger: AAAACCCTCCAGCAAATCCCAGAGCAAGGGCAAGCC...CTGTGACGCTTCTACCATGAGTTCCCTTTCCAGCCTCAGACTGTCTCCACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTGGCCACGCAGGAGGAAGTGTTCAAGTGTCAGCATCCAGAGTCAGGGCCACAGCAATTTCGGATaGAATCACCATACAGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCWPRRRKCSSVSIQSQGHSNFG*NHHTDV Trigger: GACGTCTGTATGGTGATTGCATCCGAAATTGCTGTG...GCCCTGACTCTGGATGCTGACACTTGAACACTTCCTCCTGCGTGGCCAACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGGCCAGAGGCCACCGCTGCTCCGTGATCTGCCCTTCTGCAAGGCCACACTTTTCCAATTCTCTTaGTATTCGCATACAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQGQRPPLLRDLPFCKATLFQFS*YSHTSV Trigger: TACACTTGTATGCGAATACCAAGAGAATTGGAAAAG...TGTGGCCTTGCAGAAGGGCAGATCACGGAGCAGCGGTGGCCTCTGGCCCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGGGTCAAAAGCAAGGCTaGCTCTATATTCACTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGLEENPTIWKPRLTKERGQKQG*LYIHCR Trigger: TCTACAGTGAATATAGAGCCAGCCTTGCTTTTGACC...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTCTGAGGCTGGAAGCTTCCTTCACGTATTaGCAGGACTTTCCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQMESSLERVCGDSLRLEASFTY*QDFPNS Trigger: GCTGTTGGGAAAGTCCTGTCAATACGTGAAGGAAGC...TTCCAGCCTCAGACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | CCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGAGCTTCTGCAGTGCTTGGTCACGAGTAAAGGTATaGCGTTTTCTTTCTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTIWKPRLTKERSFCSAWSRVKV*RFLSDD Trigger: GTCATCAGAAAGAAAACGTCATACCTTTACTCGTGA...CCAAGCACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | GGCTGCGTTTGGCAAAGCTTTTTCCACACGGCTCCTGGTTTCCATGGACACTCTAACAACACCCAGAGATaGTCTGGATTCCAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCVWQSFFHTAPGFHGHSNNTQR*SGFQEN Trigger: GTTTTCTTGGAATCCAGATCATCTCTGGGTGTTGTT...AGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAAAAGCTTTGCCAAACGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTCTGAGGCTGGAACAAAATAGAAGAGTATaGCACAGGCGTAGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQMESSLERVCGDSLRLEQNRRV*HRRRTG Trigger: TCCTGTCCTACGCCTGTGTCATACTCTTCTATTTTG...TTCCAGCCTCAGACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGGAGACAGTCTGAGGCTGGAAAGGGAACTCATGGTAGAAGCGTCACAGCAACATAGTGCATCATaGAATAGCAGATTACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCGDSLRLERELMVEASQQHSAS*NSRLPR Trigger: TCTTGGTAATCTGCTATTTCATGATGCACTATGTTG...CTGTGACGCTTCTACCATGAGTTCCCTTTCCAGCCTCAGACTGTCTCCACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | TGGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTCTGAGGCTGGAAAGCAGTGACTTGTTGTaGGAGTTAAAAGCTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: WQMESSLERVCGDSLRLESSDLL*ELKATL Trigger: CAATGTAGCTTTTAACTCTCACAACAAGTCACTGCT...TTCCAGCCTCAGACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGAACAGCGCGGAAACAGAAAACTCAAGCGGAACAGAAAGATACACCTAGGGGTTGTCAGGAACTaGTCAGAATTGCTAGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: FREQRGNRKLKRNRKIHLGVVRN*SELLVT Trigger: CGTGACTAGCAATTCTGATCAGTTCCTGACAACCCC...TAGGTGTATCTTTCTGTTCCGCTTGAGTTTTCTGTTTCCGCGCTGTTCTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | AACCAAAACAAAACCCAACAAACGAGCCTGGCACTAGCAACAGCTATGCAATGGACAGGTTTTCTTCTGTaGAAAGGCCTTGAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NQNKTQQTSLALATAMQWTGFLL*KGLERA Trigger: AGCCCTCTCAAGGCCTTTCCACAGAAGAAAACCTGT...CCATTGCATAGCTGTTGCTAGTGCCAGGCTCGTTTGTTGGGTTTTGTTTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | CTGGACTTAGATGTAGCAACTTGTCAATGCTTTGGCAGATGGAGTCAAGTCTGGAGCAGATTACCAAGATaGCGCCCTTCAAAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDLDVATCQCFGRWSQVWSRLPR*RPSKCH Trigger: GTGACATTTTGAAGGGCGTCATCTTGGTAATCTGCT...CCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| 3UTR CAA 72 bp | GTTAAGTGGCCTTCTGTTCTGACTAGCTCAGATGTATaGCCAAGGATGACTCTGGTGGTAAGAACGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VKWPSVLTSSDV*PRMTLVVRTSS Trigger: AGATGACGTTCTTACCACCAGAGTCATCCTTGGCAATACATCTGAGCTAGTCAGAACAGAAGGCCACTTAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR GCA 90 bp | TGGCAGATGGAGTCAAGTCTGGAAAGAGTGTGTGGAGACAGTCTGAGGCTGGAATTCACTGTAGACATCTaGAGTGATGTCATTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: WQMESSLERVCGDSLRLEFTVDI*SDVIEF Trigger: AAATTCAATGACATCACTGCAGATGTCTACAGTGAA...TTCCAGCCTCAGACTGTCTCCACACACTCTTTCCAGACTTGACTCCATCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| 3UTR CAA 72 bp | GTGGTAAGAACGTCATCTGGACTTAGATGTAGCAACTaGTCAATGCTTTGGCAGATGGAGTCAAGTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVRTSSGLRCSN*SMLWQMESSLE Trigger: TTCCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAGATGACGTTCTTACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR TCA 90 bp | GCACTTGTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTATTGTCACTGGTTAAAGGAAGCAGGGTaGACACATACAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVPFTLLTLLCAFYCHWLKEAG*THTERH Trigger: ATGCCTTTCTGTATGTGTTCACCCTGCTTCCTTTAA...CCAGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR TCA 90 bp | TTTCCACACGGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTGGTTCCCGCAAATTGTaGACCTGTCTATTTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FPHGSWFPWTLSFGKKNSGSRKL*TCLFLT Trigger: TGTTAGAAATAGACAGGTTCACAATTTGCGGGAACC...ACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCACACGGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTTCAGGTGGTACATCATaGAGTAGTCAACATAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPHGSWFPWTLSFGKKNSSGGTS*SSQHSA Trigger: TGCACTATGTTGACTACTCCATGATGTACCACCTGA...ACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGACACTGCTCAATCTGCTGGGAATACTTTAAAACTGTTACTCAAACCAAGCTTGATGACAGACTaGCCTCTTATCAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QGDTAQSAGNTLKLLLKPSLMTD*PLIRWY Trigger: GTACCACCTGATAAGAGGCCAGTCTGTCATCAAGCT...TGGTTTGAGTAACAGTTTTAAAGTATTCCCAGCAGATTGAGCAGTGTCACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCACACGGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTGCTTCTCTTCCATTTTaGCTTCCTTCACGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPHGSWFPWTLSFGKKNSASLPF*LPSRID Trigger: GTCAATACGTGAAGGAAGCCAAAATGGAAGAGAAGC...ACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | TGCCATTATGACAGAAGTGAGTATCATCCACACTCCCAAGAGCATCTGCAAAGGTCCTTGCACTTTAATTaGGCTTGTTACAACTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHYDRSEYHPHSQEHLQRSLHFN*ACYNSD Trigger: ATCAGAGTTGTAACAAGCTCAATTAAAGTGCAAGGA...CCTTTGCAGATGCTCTTGGGAGTGTGGATGATACTCACTTCTGTCATAATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| 3UTR CAA 72 bp | ACATCTTTATCTCAGATGAAAACCCCAGAGCACCTTTaGGTTGCTAGTTACAGTGTCCCAAACACTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLSQMKTPEHL*VASYSVPNTLL Trigger: AAGTAGAGTGTTTGGGACACTGTAACTAGCAACCAAAAGGTGCTCTGGGGTTTTCATCTGAGATAAAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR CCA 90 bp | TTTCCACACGGCTCCTGGTTTCCATGGACACTCTCTTTCGGTAAAAAGAATAGTTTCGCTCTGTATACTTaGCTTCATTATGTTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPHGSWFPWTLSFGKKNSFALYT*LHYVQG Trigger: TCCTTGAACATAATGAAGCCAAGTATACAGAGCGAA...ACTATTCTTTTTACCGAAAGAGAGTGTCCATGGAAACCAGGAGCCGTGTGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CCA 90 bp | AGAGCATCTAAGATATCTTGTCCAAACGAGGAGAACAGACGATCAGCTACCTCTTTCGCTCTGTATACTTaGCTTCATTATGTTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RASKISCPNEENRRSATSFALYT*LHYVQG Trigger: TCCTTGAACATAATGAAGCCAAGTATACAGAGCGAA...AGAGGTAGCTGATCGTCTGTTCTCCTCGTTTGGACAAGATATCTTAGATGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197266.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTCTTATCAGGTGGTACATCATGGAGTAGTCAACATAGTGCATCATGAACTTTTCCAATTCTCTTaGTATTCGCATACAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LASYQVVHHGVVNIVHHELFQFS*YSHTSV Trigger: TACACTTGTATGCGAATACCAAGAGAATTGGAAAAG...TTCATGATGCACTATGTTGACTACTCCATGATGTACCACCTGATAAGAGGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197266.5 |
||
| CDS-3UTR TCA 90 bp | CTTGTTGTGAGAGTTAAAAGCTACATTGAGAGTTGTTGCTTGAACCATGATAAGTTAAAGGAAGCAGGGTaGACACATACAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVVRVKSYIESCCLNHDKLKEAG*THTERH Trigger: ATGCCTTTCTGTATGTGTTCACCCTGCTTCCTTTAA...CTTATCATGGTTCAAGCAACAACTCTCAATGTAGCTTTTAACTCTCACAACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197266.5 ENSMUST00000199374.5 |
||
| CDS-3UTR TCA 90 bp | CATGACCTTTATAAAGTAAATGACTGGGCCAAGAGCTCACTGTTTCTCATAGGACATGATAGTAAGCAGTaGCTTGTTGTGAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HDLYKVNDWAKSSLFLIGHDSKQ*LVVRVK Trigger: TTTAACTCTCACAACAAGTCACTGCTTACTATCATG...TCCTATGAGAAACAGTGAGCTCTTGGCCCAGTCATTTACTTTATAAAGGTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | AAATTGCTTCCTGGCTTTACAAGGCATAAATATATAGTATCTCCAACAGCTATCTTGTCAGTTCAGCACTaGGGAACCTCAATAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPGFTRHKYIVSPTAILSVQH*GTSIMT Trigger: TGTCATTATTGAGGTTCCTCAGTGCTGAACTGACAA...GATAGCTGTTGGAGATACTATATATTTATGCCTTGTAAAGCCAGGAAGCAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR TCA 90 bp | AAATTGCTTCCTGGCTTTACAAGGCATAAATATATAGTATCTCCAACAGCTATCTTAAAGGAAGCAGGGTaGACACATACAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPGFTRHKYIVSPTAILKEAG*THTERH Trigger: ATGCCTTTCTGTATGTGTTCACCCTGCTTCCTTTAA...GATAGCTGTTGGAGATACTATATATTTATGCCTTGTAAAGCCAGGAAGCAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
||
| CDS-3UTR GCA 90 bp | TATAAAATTAGTACTGAATGCCATTATGACAGAAGTGAGTATCATCCACACTCCTTCTTTGAGGATCTGTaGTTTAACTCAGAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKISTECHYDRSEYHPHSFFEDL*FNSEFS Trigger: GGAAAATTCTGAGTTAAAGCACAGATCCTCAAAGAA...GGAGTGTGGATGATACTCACTTCTGTCATAATGGCATTCAGTACTAATTTTATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS TCA 90 bp | ACACATACAGAAAGGCATCGAGGCACAAAAATATTCCAAAGAACATaGGCTGCGCGGCCGCGGCGCTTCTCCCGCCGCCGGTCGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: THTERHRGTKIFQRT*AARPRRFSRRRSLS Trigger: CGAGAGCGACCGGCGGCGGGAGAAGCGCCGCGGCCGCGCAGCTCATGTTCTTTGGAATATTTTTGTGCCTCGATGCCTTTCTGTATGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| CDS GCA 90 bp | TACAGAAAGGCATCGAGGCACAAAAATATTCCAAAGAACATGAGCTaGGCGGCCGCGGCGCTTCTCCCGCCGCCGGTCGCTCTCGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YRKASRHKNIPKNMS*AAAALLPPPVALVE Trigger: TTCTACGAGAGCGACCGGCGGCGGGAGAAGCGCCGCGGCCGCGCAGCTCATGTTCTTTGGAATATTTTTGTGCCTCGATGCCTTTCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGGGCTTCCTTCACGTATaGACAGGACTTTCCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLEENPTIWKPRLTKERGFLHV*TGLSQQ Trigger: CTGTTGGGAAAGTCCTGTCAATACGTGAAGGAAGCC...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
||
| CDS-3UTR CAA 90 bp | CGGGCTGAAGCAGACGTCGGTCCCACAAGGAGTCCCTGTGCCACCACACTCCATCTTCGCTCTGTATACTaGGCTTCATTATGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAEADVGPTRSPCATTLHLRSVY*ASLCSR Trigger: CCTTGAACATAATGAAGCCAAGTATACAGAGCGAAG...ATGGAGTGTGGTGGCACAGGGACTCCTTGTGGGACCGACGTCTGCTTCAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197266.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGTCACACTGCACTTGTGCCTTTTACTCTGTTGACATTGCTCTGTGCCTTTTCTGTGGAAAGGCCTaGAGAGGGCTTGCCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARSHCTCAFYSVDIALCLFCGKA*RGLALA Trigger: AGCAAGGGCAAGCCCTCTCAAGGCCTTTCCACAGAA...AAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGCAGTGTGACCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS TCA 90 bp | TGGCTTCATTATGTTCAAGGAAGTACCCTCTTGTCAGTTCAGCACTaGGGAACCTCAATAATGACAGTTCTGCGCGGCCGCGGCGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: WLHYVQGSTLLSVQH*GTSIMTVLRGRGAS Trigger: AGAAGCGCCGCGGCCGCGCAGAACTGTCATTATTGAGGTTCCTCAGTGCTGAACTGACAAGAGGGTACTTCCTTGAACATAATGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTTGAGGAGAACCCGACGATCTGGAAGCCCAGGCTGACGAAGGAAAGGGCTTTTCCAATTCTCTaGGTATTCGCATACAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: RGLEENPTIWKPRLTKERAFPIL*VFAYKC Trigger: ACACTTGTATGCGAATACCAAGAGAATTGGAAAAGC...CCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS-3UTR CAA 90 bp | GCCCTTCAAAATGTCACACACCTGTGCGGGCTGAAGCAGACGTCGGTCCCACAAGCTTTTCCAATTCTCTaGGTATTCGCATACAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: ALQNVTHLCGLKQTSVPQAFPIL*VFAYKC Trigger: ACACTTGTATGCGAATACCAAGAGAATTGGAAAAGC...TTGTGGGACCGACGTCTGCTTCAGCCCGCACAGGTGTGTGACATTTTGAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197266.5 |
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| CDS-3UTR CAA 90 bp | GAGGCTGGAAAGGGAACTCATGGTAGAAGCGTCACAGTTTCCCAGGTGTGTCCTTCTGCAGTGATGTCATaGAATTTGGTGATAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: EAGKGTHGRSVTVSQVCPSAVMS*NLVIKA Trigger: TGCCTTTATCACCAAATTCAATGACATCACTGCAGA...AGGACACACCTGGGAAACTGTGACGCTTCTACCATGAGTTCCCTTTCCAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS-3UTR CAA 90 bp | TTCAGAGAACAGCGCGGAAACAGAAAACTCAAGCGGAACAGAAAGATACACCTACATCACCATCTGGGGTaGTCAGGAACTGATCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: FREQRGNRKLKRNRKIHLHHHLG*SGTDQN Trigger: ATTCTGATCAGTTCCTGACAACCCCAGATGGTGATG...TAGGTGTATCTTTCTGTTCCGCTTGAGTTTTCTGTTTCCGCGCTGTTCTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS CCA 90 bp | GTATTCGCATACAAGTGTACACCCTTTCTCTTCGCTCTGTATACTTaGCTTCATTATGTTCAAGGAAGTACCCTCTTGTCAGTTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: VFAYKCTPFLFALYT*LHYVQGSTLLSVQH Trigger: GTGCTGAACTGACAAGAGGGTACTTCCTTGAACATAATGAAGCCAAGTATACAGAGCGAAGAGAAAGGGTGTACACTTGTATGCGAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS TCA 90 bp | ACACATACAGAAAGGCATCGAGGCACAAAAATATTCCAAAGAACATaGGCTTTTCCAATTCTCTTGGTATTCGCATACAAGTGTACACCC | + |
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Preference number: 5 (lower is better) Translates to: THTERHRGTKIFQRT*AFPILLVFAYKCTP Trigger: GGGTGTACACTTGTATGCGAATACCAAGAGAATTGGAAAAGCTCATGTTCTTTGGAATATTTTTGTGCCTCGATGCCTTTCTGTATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS-3UTR CAA 90 bp | CTGTTAGTGCAAAACATTAGAAACCCTCCTGAATCTCAAATGCATAAGCCAAAGCTTCGCTCTGTATACTaGGCTTCATTATGTTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LLVQNIRNPPESQMHKPKLRSVY*ASLCSR Trigger: CCTTGAACATAATGAAGCCAAGTATACAGAGCGAAG...CTTTGGCTTATGCATTTGAGATTCAGGAGGGTTTCTAATGTTTTGCACTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS CCA 90 bp | GAGGCACAAAAATATTCCAAAGAACATGAGCTTTTCCAATTCTCTTaGTATTCGCATACAAGTGTACACCCTTTCTCTTCGCTCTGTATA | + |
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Preference number: 5 (lower is better) Translates to: EAQKYSKEHELFQFS*YSHTSVHPFSSLCI Trigger: TATACAGAGCGAAGAGAAAGGGTGTACACTTGTATGCGAATACCAAGAGAATTGGAAAAGCTCATGTTCTTTGGAATATTTTTGTGCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS-3UTR CAA 90 bp | AAATTGCTTCCTGGCTTTACAAGGCATAAATATATAGTATCTCCAACAGCTATCGTGATGTCATTGAATTaGGTGATAAAGGCATGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KLLPGFTRHKYIVSPTAIVMSLN*VIKACF Trigger: AAAGCATGCCTTTATCACCAAATTCAATGACATCAC...GATAGCTGTTGGAGATACTATATATTTATGCCTTGTAAAGCCAGGAAGCAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS CCA 72 bp | AAGCCCAGCGTCTCGGTGTGTTGGGGCGCGGGCCCATaGCCGCCACCACCCGGCTGCTCCGCCTCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: KPSVSVCWGAGP*PPPPGCSASPR Trigger: CCGCGGCGAGGCGGAGCAGCCGGGTGGTGGCGGCCATGGGCCCGCGCCCCAACACACCGAGACGCTGGGCTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| CDS CAA 90 bp | CTCCCGCCGCCGGTCGCTCTCGTAGAAGCCCAGCGTCTCGGTGTGTaGGGGCGCGGGCCCATGGCCGCCACCACCCGGCTGCTCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPPPVALVEAQRLGV*GRGPMAATTRLLRL Trigger: GAGGCGGAGCAGCCGGGTGGTGGCGGCCATGGGCCCGCGCCCCAACACACCGAGACGCTGGGCTTCTACGAGAGCGACCGGCGGCGGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| CDS CAA 72 bp | CCGGTCGCTCTCGTAGAAGCCCAGCGTCTCGGTGTGTaGGGGCGCGGGCCCATGGCCGCCACCACCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVALVEAQRLGV*GRGPMAATTRL Trigger: CAGCCGGGTGGTGGCGGCCATGGGCCCGCGCCCCAACACACCGAGACGCTGGGCTTCTACGAGAGCGACCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000199374.5 |
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| CDS GCA 72 bp | GCATCGAGGCACAAAAATATTCCAAAGAACATGAGCTaGGCGGCCGCGGCGCTTCTCCCGCCGCCGGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: ASRHKNIPKNMS*AAAALLPPPVA Trigger: AGCGACCGGCGGCGGGAGAAGCGCCGCGGCCGCGCAGCTCATGTTCTTTGGAATATTTTTGTGCCTCGATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| CDS TCA 72 bp | GAAAGGCATCGAGGCACAAAAATATTCCAAAGAACATaGGCTGCGCGGCCGCGGCGCTTCTCCCGCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: ERHRGTKIFQRT*AARPRRFSRRR Trigger: CCGGCGGCGGGAGAAGCGCCGCGGCCGCGCAGCTCATGTTCTTTGGAATATTTTTGTGCCTCGATGCCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199374.5 |
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| CDS TCA 72 bp | TATGTTCAAGGAAGTACCCTCTTGTCAGTTCAGCACTaGGGAACCTCAATAATGACAGTTCTGCGCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: YVQGSTLLSVQH*GTSIMTVLRGR Trigger: GCGGCCGCGCAGAACTGTCATTATTGAGGTTCCTCAGTGCTGAACTGACAAGAGGGTACTTCCTTGAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055128.12 |
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| CDS CAA 90 bp | GGTATTCGCATACAAGTGTACACCCTTTCTCTTCGCTCTGTATACTaGGCTTCATTATGTTCAAGGAAGTACCCTCTTGTCAGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GIRIQVYTLSLRSVY*ASLCSRKYPLVSSA Trigger: TGCTGAACTGACAAGAGGGTACTTCCTTGAACATAATGAAGCCAAGTATACAGAGCGAAGAGAAAGGGTGTACACTTGTATGCGAATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS CCA 72 bp | TACAAGTGTACACCCTTTCTCTTCGCTCTGTATACTTaGCTTCATTATGTTCAAGGAAGTACCCTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YKCTPFLFALYT*LHYVQGSTLLS Trigger: TGACAAGAGGGTACTTCCTTGAACATAATGAAGCCAAGTATACAGAGCGAAGAGAAAGGGTGTACACTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS CAA 72 bp | ATACAAGTGTACACCCTTTCTCTTCGCTCTGTATACTaGGCTTCATTATGTTCAAGGAAGTACCCTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: IQVYTLSLRSVY*ASLCSRKYPLV Trigger: GACAAGAGGGTACTTCCTTGAACATAATGAAGCCAAGTATACAGAGCGAAGAGAAAGGGTGTACACTTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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| CDS CCA 72 bp | AAATATTCCAAAGAACATGAGCTTTTCCAATTCTCTTaGTATTCGCATACAAGTGTACACCCTTTCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: KYSKEHELFQFS*YSHTSVHPFSS Trigger: CGAAGAGAAAGGGTGTACACTTGTATGCGAATACCAAGAGAATTGGAAAAGCTCATGTTCTTTGGAATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055128.12 ENSMUST00000197266.5 |
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