Pregenerated sensors for TAPBPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038213Ensembl transcript IDs: ENSMUST00000043422.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTaGCACCTTCAGGCCCAGCTCAGCCCCACACCTCACACGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: QRLVQSRASTALPMC*HLQAQLSPTPHTGS Trigger: GGACCCCGTGTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR GCA 90 bp | AAGCAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTaGTGGCACCTTCAGGCCCAGCTCAGCCCCACACCTCACACGGGG | + |
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Preference number: 1 (lower is better) Translates to: KQRLVQSRASTALPM*WHLQAQLSPTPHTG Trigger: CCCCGTGTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR TCA 90 bp | ATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCAGATCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVSHHVVAGI*TPDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR CCA 90 bp | GAGTCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCAGATCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSRSSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR CAA 90 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCAGATCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSRSSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR CCA 72 bp | GTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTaGCACCTTCAGGCCCAGCTCAGCCCCACACCTCAC | + |
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Preference number: 3 (lower is better) Translates to: VQSRASTALPMC*HLQAQLSPTPH Trigger: GTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR GCA 72 bp | CTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTaGTGGCACCTTCAGGCCCAGCTCAGCCCCACACCT | + |
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Preference number: 3 (lower is better) Translates to: LVQSRASTALPM*WHLQAQLSPTP Trigger: AGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR TCA 72 bp | AGATCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCCACCCCCGATTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: RSSEEQSGALTH*AISPAPTPDFL Trigger: TAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCAGATCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TPDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCAACAGAAAGCAGAGACTaGTACAGTCCAGGGCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSTESRD*YSPGPV Trigger: TACTGGCCCTGGACTGTACAAGTCTCTGCTTTCTGT...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR CCA 72 bp | CTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCAGATCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSRSSEEQS Trigger: CGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR GCA 72 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCAGATCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSRSSEEQ Trigger: CTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR-3UTR CAA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCACCTTCCCTTTCTCCTTaGAGAAGGAAAGCCCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSPSLSP*RRKALF Trigger: AAAAAGGGCTTTCCTTCTCAAAGGAGAAAGGGAAGG...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTGCCACTCCACGCCAGTaGGGTCCAGGCCTGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISATPRQ*GPGLVP Trigger: TGGCACCAGGCCTGGACCTCACTGGCGTGGAGTGGC...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCCCAGCTCAGCCCCACCTGCCGCTGTCTTTCTaGTGTGGTGGGCGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQYCTPNVLAPSGPAQPHLPLSF*CGGRCG Trigger: CCCACAGCGCCCACCACAGCAGAAAGACAGCGGCAG...GTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTCCATCGTGCTCTGCCTaGGGCTGGAGAAGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISPSCSA*GWRRRH Trigger: GTGCCTCCTTCTCCAGCCTCAGGCAGAGCACGATGG...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTCGCTTGGCCTGCCCCTaGCCTGTCTTCCAGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISRLACP*PVFQLY Trigger: GTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCG...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCCCAGCTGAGGTCCAGGCCTGGTaGCATGGAGAAACTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TVQGQYCTPNVLAPSGPAEVQAW*HGETAV Trigger: CACTGCAGTTTCTCCATGGCACCAGGCCTGGACCTC...AGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCCCAGCTAGTAGCCGGCAATGCTaGAGACGAGGGAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TVQGQYCTPNVLAPSGPASSRQC*RRGKAE Trigger: CTCTGCCTTCCCTCGTCTGCAGCATTGCCGGCTACT...AGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | ACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCCCAGCTACCAGAGACTTGGGCTaGAATTCCACCCAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TVQGQYCTPNVLAPSGPATRDLG*NSTQLL Trigger: GAGGAGCTGGGTGGAATTCCAGCCCAAGTCTCTGGT...AGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGGTTCCCATCGTGCTCTaGCTGAGGCTGGAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRVPIVL*LRLEKE Trigger: CTCCTTCTCCAGCCTCAGGCAGAGCACGATGGGAAC...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | CAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTGCTGTCTTTCTGCTGTaGTGGGCGCTGTGGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QRLVQSRASTALPMCWHLAVFLL*WALWEG Trigger: ACCCTCCCACAGCGCCCACCACAGCAGAAAGACAGC...AAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTGTCTCAGTGCTCCCCTaGAAATCTGTGATGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISVSVLP*KSVMPS Trigger: GGAAGGCATCACAGATTTCCAGGGGAGCACTGAGAC...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | CAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCTTGGCAGGTGTAAGTaGCACCTGTGGGGCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: QRLVQSRASTALPMCWHLLGRCK*HLWGLG Trigger: ACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAG...AAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTCTGTACCAAGTCCACTaGGGCCTCAAAGATAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISLYQVH*GLKDNR Trigger: CCTGTTATCTTTGAGGCCTCAGTGGACTTGGTACAG...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGTCCAGCACTGGTACCTaGTTCAGCACAAGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRSSTGT*FSTSKA Trigger: GGCCTTGCTTGTGCTGAAGCAGGTACCAGTGCTGGA...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | AGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTAAGTGGCCTCTTGTCTaGCCTGGAGGAAATACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SRVLLPTEPSHQPPPPISKWPLV*PGGNTW Trigger: CCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTT...AGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCACCAGGCCTGGTGCCATaGAGAAACTGCAGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSPGLVP*RNCSAG Trigger: CCCTGCACTGCAGTTTCTCCATGGCACCAGGCCTGG...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | CAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGGTTTGGGTCTCTaGTGTCACCTGGAACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QRLVQSRASTALPMCWHLQGLGL*CHLELH Trigger: GTGGAGTTCCAGGTGACATCAGAGACCCAAACCCTG...AAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | ACTGCACTCCCAATGTGCTGGCACCTTCAGGCCCAGCTCAGCCCCACACCTCACCCACCTCTAGAAACCTaGATGTTGCTGATGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: TALPMCWHLQAQLSPTPHPPLET*MLLMNQ Trigger: TTGGTTCATCAGCAACATGCAGGTTTCTAGAGGTGG...GTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAGTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCAAGAAGCAGTCTAAGATaGTGTCCGTGGGCTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSRSSLR*CPWAAA Trigger: AGCGGCAGCCCACGGACATCATCTTAGACTGCTTCT...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | CAGAGACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCTTGAGTCTTCACTGTaGCCTGGGCACTCAGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QRLVQSRASTALPMCWHLLESSL*PGHSEV Trigger: TACCTCTGAGTGCCCAGGGCACAGTGAAGACTCAAG...AAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCAGTGCCATGGAGAAACTaGAGTGCAGGGAGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSVPWRN*SAGRQR Trigger: CCTCTGTCTCCCTGCACTGCAGTTTCTCCATGGCAC...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGATCTGATCTCGCAGGTCACTaGCTTCCCGCTGCAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VTDGCEPPCGCWDLNSRSDLAGH*LPAAVS Trigger: GCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATC...AGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCACAGGTGAATCCTGTTTaGTCTCAGTGCTCCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSQVNPV*SQCSPG Trigger: TCCAGGGGAGCACTGAGACCAAACAGGATTCACCTG...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCAGAGGACCCCAGCAGGTaGTTCAGGGTTTGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSEDPSR*FRVWVS Trigger: AGAGACCCAAACCCTGAACCACCTGCTGGGGTCCTC...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCACAGCTGTACACCAGCTaGCCGCTGCCTTTATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSQLYTS*PLPLCC Trigger: GCAGCATAAAGGCAGCGGCCAGCTGGTGTACAGCTG...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCAGATCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSRSSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCAAGTGAGGTCCAGGCCTaGTGCCATGGAGAAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSSEVQA*CHGETA Trigger: TGCAGTTTCTCCATGGCACCAGGCCTGGACCTCACT...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCTTGATACAGAGAGGTaGAGATCTGGCAGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRLDTER*RSGRCS Trigger: ACTACATCTGCCAGATCTCCACCTCTCTGTATCAAG...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | GTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGATCTGAGGCACCAGAGACTTaGGCTGGAATTCCACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VTDGCEPPCGCWDLNSRSEAPET*AGIPPS Trigger: GCTGGGTGGAATTCCAGCCCAAGTCTCTGGTGCCTC...AGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTTGTAAGTGGCACCTGTaGGGCCTGGGTCAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: FILTVLAFMSGHSLSRFPCKWHL*GLGQPS Trigger: TGATGGCTGACCCAGGCCCCACAGGTGCCACTTACA...AGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | CACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCCTCTTGTCCTGTGGGAGGGTCAGTCCCTaGTGCCCCAGAGACAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HIDGVSFHFDNSAILLSCGRVSP*CPRDSQ Trigger: TTGGCTGTCTCTGGGGCAGCAGGGACTGACCCTCCC...ACAGGACAAGAGGATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TCTTACCCACTGAGCCATCTCACCAGCCCCCACCCCCGATTTCTTAATACCTCAGGTTCCTCTCTGCTCTaGATTTGGCAAAACCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SYPLSHLTSPHPRFLNTSGSSLL*IWQNPH Trigger: ATGAGGGTTTTGCCAAATCCAGAGCAGAGAGGAACC...TGAGGTATTAAGAAATCGGGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGATCTATGGAGCAACGCCTCTaGCTGGGGAATCTGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: VTDGCEPPCGCWDLNSRSMEQRL*LGNLYQ Trigger: TTGGTACAGATTCCCCAGGCAGAGGCGTTGCTCCAT...AGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCAGAGGATCCTTGTTTaGCAAGTGCAGTTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRQRILV*QVQLYF Trigger: AAAATACAACTGCACTTGGCAAACAAGGATCCTCTG...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCAGCCTCTTGTCTGGCCTaGAGGAAATACTTGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSASCLA*RKYLEI Trigger: GATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGC...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCAGAAGCTTGCTGTCTGTaGAGTCCCAGAAACAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSEACCL*SPRNNN Trigger: GTTGTTGTTTCTGGGACTTCACAGACAGCAAGCTTC...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | TTCTTAATACCTCACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCCTGTGGTGGGCGCTGTaGGAGGGTCAGTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLIPHIDGVSFHFDNSAILWWAL*EGQSLL Trigger: CAGCAGGGACTGACCCTCCCACAGCGCCCACCACAG...GATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTGAGGTATTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CCA 90 bp | CACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCCTCTTGTCCTGTAGGTGGTTCAGGGTTTaGGTCTCTGATGTCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIDGVSFHFDNSAILLSCRWFRV*VSDVTW Trigger: CCAGGTGACATCAGAGACCCAAACCCTGAACCACCT...ACAGGACAAGAGGATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR TCA 90 bp | GTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGATCTCTCAAAGATAACAGGTaGATCCTGTTTGGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTDGCEPPCGCWDLNSRSLKDNR*ILFGLS Trigger: ACTGAGACCAAACAGGATTCACCTGTTATCTTTGAG...AGATCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | TTCTTAATACCTCACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCGCAAAAGCCCCGCGGTaGCTGTCTTCTGTCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLIPHIDGVSFHFDNSAIAKAPR*LSSVTK Trigger: CTTGGTGACAGAAGACAGGCACCGCGGGGCTTTTGC...GATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTGAGGTATTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | TTCTTAATACCTCACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCTCACTGCCTTCCCGCTaGAGTCAGCATGGAGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: FLIPHIDGVSFHFDNSAISLPSR*SQHGAT Trigger: CGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGA...GATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTGAGGTATTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR GCA 90 bp | TTCTTAATACCTCACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCGCTGATGAACCAATGTaGTTTCTCAAAAGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLIPHIDGVSFHFDNSAIADEPM*FLKSGL Trigger: GAGGCCACTTTTGAGAAAGCACATTGGTTCATCAGC...GATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTGAGGTATTAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CTGAGTAGCTCCTCAGGCTCCAGTGTAGCGCCCTTGCGCTTGGCCTaGCCCTGCCCTGTCTTCCAGCTGTACACCAGCTGGCCGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSGSSVAPLRLA*PCPVFQLYTSWPLP Trigger: AGGCAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGAGCCTGAGGAGCTACTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | TTGCGCTTGGCCTGCCCCTGCCCTGTCTTCCAGCTGTACACCAGCTaGCCGCTGCCTTTATGCTGCAGCCGCCACTCCACGCCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLACPCPVFQLYTS*PLPLCCSRHSTPVR Trigger: CCTCACTGGCGTGGAGTGGCGGCTGCAGCATAAAGGCAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | TGCCCTGTCTTCCAGCTGTACACCAGCTGGCCGCTGCCTTTATGCTaGAGCCGCCACTCCACGCCAGTGAGGTCCAGGCCTGGTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CPVFQLYTSWPLPLC*SRHSTPVRSRPGAM Trigger: CATGGCACCAGGCCTGGACCTCACTGGCGTGGAGTGGCGGCTGCAGCATAAAGGCAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | AGCTCCTCAGGCTCCAGTGTAGCGCCCTTGCGCTTGGCCTGCCCCTaGCCTGTCTTCCAGCTGTACACCAGCTGGCCGCTGCCTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSGSSVAPLRLACP*PVFQLYTSWPLPLC Trigger: GCATAAAGGCAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGAGCCTGAGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CCGCTGTCTTTCTGCTGTGGTGGGCGCTGTGGGAGGGTCAGTCCCTaGTGCCCCAGAGACAGCCAAACAGAGCAGCAGATACCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSFCCGGRCGRVSP*CPRDSQTEQQIPAG Trigger: CCCAGCTGGTATCTGCTGCTCTGTTTGGCTGTCTCTGGGGCAGCAGGGACTGACCCTCCCACAGCGCCCACCACAGCAGAAAGACAGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CTGTCTTTCTGCTGTGGTGGGCGCTGTGGGAGGGTCAGTCCCTGCTaGCCCAGAGACAGCCAAACAGAGCAGCAGATACCAGCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFCCGGRCGRVSPC*PRDSQTEQQIPAGL Trigger: GAGCCCAGCTGGTATCTGCTGCTCTGTTTGGCTGTCTCTGGGGCAGCAGGGACTGACCCTCCCACAGCGCCCACCACAGCAGAAAGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | TTTATGCTGCAGCCGCCACTCCACGCCAGTGAGGTCCAGGCCTGGTaGCATGGAGAAACTGCAGTGCAGGGAGACAGAGGACCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FMLQPPLHASEVQAW*HGETAVQGDRGPQQ Trigger: CTGCTGGGGTCCTCTGTCTCCCTGCACTGCAGTTTCTCCATGGCACCAGGCCTGGACCTCACTGGCGTGGAGTGGCGGCTGCAGCATAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | CTCCCAATGTGCTGGCACCTTCAGGCCCAGCTCAGCCCCACACCTCACACGGGGCACCTGGAACTCCACTaGAGTCTTCACTGTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPMCWHLQAQLSPTPHTGHLELH*SLHCAL Trigger: CAGGGCACAGTGAAGACTCAAGTGGAGTTCCAGGTG...CCCCGTGTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACATTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGTCCAGTGTAGCGCCCTaGCGCTTGGCCTGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRSSVAP*RLACPC Trigger: GCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGA...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | CCTCCAGGGAGACGTGGGCGACTTGGCAGGTGTAAGTGGCACCTGTaGGGCCTGGGTCAGCCATCACCGTGGAAGAAATGCTGTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPGRRGRLGRCKWHL*GLGQPSPWKKCCRF Trigger: GAACCTACAGCATTTCTTCCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCCCTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 90 bp | AAGCCCCGCGGTGCCTGTCTTCTGTCACCAAGAAGCAGTCTAAGATaGTGTCCGTGGGCTGCCGCTGTCTTTCTGCTGTGGTGGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRGACLLSPRSSLR*CPWAAAVFLLWWAL Trigger: CAGCGCCCACCACAGCAGAAAGACAGCGGCAGCCCACGGACATCATCTTAGACTGCTTCTTGGTGACAGAAGACAGGCACCGCGGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CTCTTGTCTGGCCTGGAGGAAATACTTGGAGATCTCGCAGGTCACTaGCTTCCCGCTGCAGTCAGCATGGAGCAACGCCTCTGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSGLEEILGDLAGH*LPAAVSMEQRLCLG Trigger: CCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | GGAGACGTGGGCGACTTGGCAGGTGTAAGTGGCACCTGTGGGGCCTaGGTCAGCCATCACCGTGGAAGAAATGCTGTAGGTTCCCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: GDVGDLAGVSGTCGA*VSHHRGRNAVGSHR Trigger: ACGATGGGAACCTACAGCATTTCTTCCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGTCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATGTAGCGCCCTTGCGCTaGGCCTGCCCCTGCCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RESDLVTDGCEPPCGCWDVAPLR*ACPCPV Trigger: GACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTAC...ATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGACTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGGGAGACGTGGGCGACTaGGCAGGTGTAAGTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRGDVGD*AGVSGT Trigger: GGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCC...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 90 bp | CAGGGAGACAGAGGACCCCAGCAGGTGGTTCAGGGTTTGGGTCTCTaGTGTCACCTGGAACTCCACTTGAGTCTTCACTGTGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGDRGPQQVVQGLGL*CHLELHLSLHCALG Trigger: GCCCAGGGCACAGTGAAGACTCAAGTGGAGTTCCAGGTGACATCAGAGACCCAAACCCTGAACCACCTGCTGGGGTCCTCTGTCTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | AAATCTGTGATGCCTTCCAGGGAGCCATCATCCAGCACTGGTACCTaGTTCAGCACAAGCAAGGCCCTCTCCCTGTCCCCACTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVMPSREPSSSTGT*FSTSKALSLSPLLA Trigger: TGCCAGCAGTGGGGACAGGGAGAGGGCCTTGCTTGTGCTGAAGCAGGTACCAGTGCTGGATGATGGCTCCCTGGAAGGCATCACAGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CCTGGAGGAAATACTTGGAGATCTCGCAGGTCACTGCCTTCCCGCTaGAGTCAGCATGGAGCAACGCCTCTGCCTGGGGAATCTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PGGNTWRSRRSLPSR*SQHGATPLPGESVP Trigger: TGGTACAGATTCCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | TACTTGGAGATCTCGCAGGTCACTGCCTTCCCGCTGCAGTCAGCATaGAGCAACGCCTCTGCCTGGGGAATCTGTACCAAGTCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLEISQVTAFPLQSA*SNASAWGICTKSTE Trigger: CTCAGTGGACTTGGTACAGATTCCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | GTCACTGCCTTCCCGCTGCAGTCAGCATGGAGCAACGCCTCTGCCTaGGGAATCTGTACCAAGTCCACTGAGGCCTCAAAGATAACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTAFPLQSAWSNASA*GICTKSTEASKITG Trigger: ACCTGTTATCTTTGAGGCCTCAGTGGACTTGGTACAGATTCCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | CTCGAATCCACGTCACTCCCACATCCAGAGGATAGTAGCCGGCAATaGTGCAGACGAGGGAAGGCAGAGGATCCTTGTTTGCCAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LESTSLPHPEDSSRQ*CRRGKAEDPCLPSA Trigger: TGCACTTGGCAAACAAGGATCCTCTGCCTTCCCTCGTCTGCAGCATTGCCGGCTACTATCCTCTGGATGTGGGAGTGACGTGGATTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | ATGTGCTGGCACCTTCAGGCCCAGCTCAGCCCCACACCTCACACGGGGTCCTTTGCAGAGGATCCTTGTTaGCCAAGTGCAGTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: MCWHLQAQLSPTPHTGSFAEDPC*PSAVVF Trigger: AAATACAACTGCACTTGGCAAACAAGGATCCTCTGC...AAAGGACCCCGTGTGAGGTGTGGGGCTGAGCTGGGCCTGAAGGTGCCAGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCTCTCTGCTCTGGATTaGGCAAAACCCTCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRLSALD*AKPSCW Trigger: CCAGCATGAGGGTTTTGCCAAATCCAGAGCAGAGAG...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | GTCTTCACTGTGCCCTGGGCACTCAGAGGTAGGTTCAGTGTAGGGTaGCGGACAGCTCCAACTTCAGCATCTCTTAGAGTCTTCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: VFTVPWALRGRFSVG*RTAPTSASLRVFIT Trigger: GGTGATGAAGACTCTAAGAGATGCTGAAGTTGGAGCTGTCCGGCACCCTACACTGAACCTACCTCTGAGTGCCCAGGGCACAGTGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | GAATCCACGTCACTCCCACATCCAGAGGATAGTAGCCGGCAATGCTaGAGACGAGGGAAGGCAGAGGATCCTTGTTTGCCAAGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESTSLPHPEDSSRQC*RRGKAEDPCLPSAV Trigger: AACTGCACTTGGCAAACAAGGATCCTCTGCCTTCCCTCGTCTGCAGCATTGCCGGCTACTATCCTCTGGATGTGGGAGTGACGTGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 90 bp | GTGCTTTCTCAAAAGTGGCCTCTTGTCTGGCCTGGAGGAAATACTTaGAGATCTCGCAGGTCACTGCCTTCCCGCTGCAGTCAGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLSQKWPLVWPGGNT*RSRRSLPSRCSQHG Trigger: TCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGAGAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 90 bp | AGGTGGTTCAGGGTTTGGGTCTCTGATGTCACCTGGAACTCCACTTaGGTCTTCACTGTGCCCTGGGCACTCAGAGGTAGGTTCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RWFRVWVSDVTWNST*VFTVPWALRGRFSV Trigger: TACACTGAACCTACCTCTGAGTGCCCAGGGCACAGTGAAGACTCAAGTGGAGTTCCAGGTGACATCAGAGACCCAAACCCTGAACCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | GACTTGTACAGTCCAGGGCCAGTACTGCACTCCCAATGTGCTGGCACCTTCAGGCATGATCTGTTGAGCTaGATACAGAGAGGTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DLYSPGPVLHSQCAGTFRHDLLS*IQRGGD Trigger: ATCTCCACCTCTCTGTATCAAGCTCAACAGATCATG...CCTGAAGGTGCCAGCACATTGGGAGTGCAGTACTGGCCCTGGACTGTACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | TATTTTGACAGTGTTGGCATTCATGAGTGGTCACAGCCTCTCCCGCTTCCCTCATCCTTTAGAGTGAGGTaGGGTAAGGTGAGAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFDSVGIHEWSQPLPLPSSFRVR*GKVREA Trigger: CGCCTCTCTCACCTTACCCAACCTCACTCTAAAGGA...TGAGGGAAGCGGGAGAGGCTGTGACCACTCATGAATGCCAACACTGTCAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 90 bp | TGCCTCATAGGCCTGGTGGACCTTGATGAAGAAGCTTGCTGTCTGTaGAGTCCCAGAAACAACAACAGCGCAGAAAGGAAGATGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLIGLVDLDEEACCL*SPRNNNSAERKMML Trigger: CAGCATCATCTTCCTTTCTGCGCTGTTGTTGTTTCTGGGACTTCACAGACAGCAAGCTTCTTCATCAAGGTCCACCAGGCCTATGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | ACTGGGGCCACCTCTAGAAACCTGCATGTTGCTGATGAACCAATGTaGTTTCTCAAAAGTGGCCTCTTGTCTGGCCTGGAGGAAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: TGATSRNLHVADEPM*FLKSGLLSGLEEIL Trigger: AAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGAGAAAGCACATTGGTTCATCAGCAACATGCAGGTTTCTAGAGGTGGCCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 90 bp | AGAGTCTTCATCACCATGGAGACACTGGGGCCACCTCTAGAAACCTaGATGTTGCTGATGAACCAATGTGCTTTCTCAAAAGTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVFITMETLGPPLET*MLLMNQCAFSKVAS Trigger: AGAGGCCACTTTTGAGAAAGCACATTGGTTCATCAGCAACATGCAGGTTTCTAGAGGTGGCCCCAGTGTCTCCATGGTGATGAAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | CACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCCTCTTGTCCTGTAAGTGGCATGATCTGTaGAGCTTGATACAGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HIDGVSFHFDNSAILLSCKWHDL*SLIQRG Trigger: ACCTCTCTGTATCAAGCTCAACAGATCATGCCACTT...ACAGGACAAGAGGATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS-3UTR CAA 90 bp | TTCTTAATACCTCACATAGATGGTGTTAGCTTCCACTTTGATAATTCTGCCATCCTCAAAAGTGGCCTCTaGTCTGGCCTGGAGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLIPHIDGVSFHFDNSAILKSGL*SGLEEI Trigger: TATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGAG...GATGGCAGAATTATCAAAGTGGAAGCTAACACCATCTATGTGAGGTATTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | GGCTCCAGTGTAGCGCCCTTGCGCTTGGCCTGCCCCTaGCCTGTCTTCCAGCTGTACACCAGCTGGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSVAPLRLACP*PVFQLYTSWPL Trigger: CAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | TGGGCTGCCGCTGTCTTTCTGCTGTGGTGGGCGCTGTaGGAGGGTCAGTCCCTGCTGCCCCAGAGACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WAAAVFLLWWAL*EGQSLLPQRQP Trigger: TGGCTGTCTCTGGGGCAGCAGGGACTGACCCTCCCACAGCGCCCACCACAGCAGAAAGACAGCGGCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | GCCTGCCCCTGCCCTGTCTTCCAGCTGTACACCAGCTaGCCGCTGCCTTTATGCTGCAGCCGCCACTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ACPCPVFQLYTS*PLPLCCSRHST Trigger: CGTGGAGTGGCGGCTGCAGCATAAAGGCAGCGGCCAGCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | CCTCCAGGGAGACGTGGGCGACTTGGCAGGTGTAAGTaGCACCTGTGGGGCCTGGGTCAGCCATCACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGRRGRLGRCK*HLWGLGQPSPW Trigger: CCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCCCTGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | GCCCTGAGTAGCTCCTCAGGCTCCAGTGTAGCGCCCTaGCGCTTGGCCTGCCCCTGCCCTGTCTTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSSSSGSSVAP*RLACPCPVFQL Trigger: CAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGAGCCTGAGGAGCTACTCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | GGTTGTAAGGGGCTCCTCCAGGGAGACGTGGGCGACTaGGCAGGTGTAAGTGGCACCTGTGGGGCCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GCKGLLQGDVGD*AGVSGTCGAWV Trigger: GACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCCCTGGAGGAGCCCCTTACAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 90 bp | GCGTTTCCAGCCCTGAGTAGCTCCTCAGGCTCCAGTGTAGCGCCCTaGCGCTTGGCCTGCCCCTGCCCTGTCTTCCAGCTGTACACCAGC | + |
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Preference number: 6 (lower is better) Translates to: AFPALSSSSGSSVAP*RLACPCPVFQLYTS Trigger: GCTGGTGTACAGCTGGAAGACAGGGCAGGGGCAGGCCAAGCGCAAGGGCGCTACACTGGAGCCTGAGGAGCTACTCAGGGCTGGAAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | TTCCAGCTGTACACCAGCTGGCCGCTGCCTTTATGCTaGAGCCGCCACTCCACGCCAGTGAGGTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FQLYTSWPLPLC*SRHSTPVRSRP Trigger: AGGCCTGGACCTCACTGGCGTGGAGTGGCGGCTGCAGCATAAAGGCAGCGGCCAGCTGGTGTACAGCTGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 90 bp | CCTCATGCTGGTTGTAAGGGGCTCCTCCAGGGAGACGTGGGCGACTaGGCAGGTGTAAGTGGCACCTGTGGGGCCTGGGTCAGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: PHAGCKGLLQGDVGD*AGVSGTCGAWVSHH Trigger: GTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCTCCCTGGAGGAGCCCCTTACAACCAGCATGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 72 bp | CGCTGCCTTTATGCTGCAGCCGCCACTCCACGCCAGTaGGGTCCAGGCCTGGTGCCATGGAGAAACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RCLYAAAATPRQ*GPGLVPWRNCS Trigger: ACTGCAGTTTCTCCATGGCACCAGGCCTGGACCTCACTGGCGTGGAGTGGCGGCTGCAGCATAAAGGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | TTCTGCTGTGGTGGGCGCTGTGGGAGGGTCAGTCCCTaGTGCCCCAGAGACAGCCAAACAGAGCAGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: FCCGGRCGRVSP*CPRDSQTEQQI Trigger: TATCTGCTGCTCTGTTTGGCTGTCTCTGGGGCAGCAGGGACTGACCCTCCCACAGCGCCCACCACAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | AGACGTGGGCGACTTGGCAGGTGTAAGTGGCACCTGTaGGGCCTGGGTCAGCCATCACCGTGGAAGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: RRGRLGRCKWHL*GLGQPSPWKKC Trigger: GCATTTCTTCCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCCCACGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | ATGCCTTCCAGGGAGCCATCATCCAGCACTGGTACCTaGTTCAGCACAAGCAAGGCCCTCTCCCTGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: MPSREPSSSTGT*FSTSKALSLSP Trigger: TGGGGACAGGGAGAGGGCCTTGCTTGTGCTGAAGCAGGTACCAGTGCTGGATGATGGCTCCCTGGAAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | GGCCTGGAGGAAATACTTGGAGATCTCGCAGGTCACTaGCTTCCCGCTGCAGTCAGCATGGAGCAACGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLEEILGDLAGH*LPAAVSMEQRL Trigger: GAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | AAGTGGCACCTGTGGGGCCTGGGTCAGCCATCACCGTaGAAGAAATGCTGTAGGTTCCCATCGTGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: KWHLWGLGQPSP*KKCCRFPSCSA Trigger: GGCAGAGCACGATGGGAACCTACAGCATTTCTTCCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | GGCGACTTGGCAGGTGTAAGTGGCACCTGTGGGGCCTaGGTCAGCCATCACCGTGGAAGAAATGCTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GDLAGVSGTCGA*VSHHRGRNAVG Trigger: ACCTACAGCATTTCTTCCACGGTGATGGCTGACCCAGGCCCCACAGGTGCCACTTACACCTGCCAAGTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | AATACTTGGAGATCTCGCAGGTCACTGCCTTCCCGCTaGAGTCAGCATGGAGCAACGCCTCTGCCTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: NTWRSRRSLPSR*SQHGATPLPGE Trigger: TTCCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | TTCCCGCTGCAGTCAGCATGGAGCAACGCCTCTGCCTaGGGAATCTGTACCAAGTCCACTGAGGCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FPLQSAWSNASA*GICTKSTEASK Trigger: CTTTGAGGCCTCAGTGGACTTGGTACAGATTCCCCAGGCAGAGGCGTTGCTCCATGCTGACTGCAGCGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | GTGCCCTGGGCACTCAGAGGTAGGTTCAGTGTAGGGTaGCGGACAGCTCCAACTTCAGCATCTCTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VPWALRGRFSVG*RTAPTSASLRV Trigger: GACTCTAAGAGATGCTGAAGTTGGAGCTGTCCGGCACCCTACACTGAACCTACCTCTGAGTGCCCAGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 72 bp | GGTGCCTGTCTTCTGTCACCAAGAAGCAGTCTAAGATaGTGTCCGTGGGCTGCCGCTGTCTTTCTGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GACLLSPRSSLR*CPWAAAVFLLW Trigger: CCACAGCAGAAAGACAGCGGCAGCCCACGGACATCATCTTAGACTGCTTCTTGGTGACAGAAGACAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | TCACTCCCACATCCAGAGGATAGTAGCCGGCAATGCTaGAGACGAGGGAAGGCAGAGGATCCTTGTTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLPHPEDSSRQC*RRGKAEDPCLP Trigger: TGGCAAACAAGGATCCTCTGCCTTCCCTCGTCTGCAGCATTGCCGGCTACTATCCTCTGGATGTGGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | ACGTCACTCCCACATCCAGAGGATAGTAGCCGGCAATaGTGCAGACGAGGGAAGGCAGAGGATCCTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: TSLPHPEDSSRQ*CRRGKAEDPCL Trigger: CAAACAAGGATCCTCTGCCTTCCCTCGTCTGCAGCATTGCCGGCTACTATCCTCTGGATGTGGGAGTGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CCA 72 bp | CAAAAGTGGCCTCTTGTCTGGCCTGGAGGAAATACTTaGAGATCTCGCAGGTCACTGCCTTCCCGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QKWPLVWPGGNT*RSRRSLPSRCS Trigger: ACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | TCAAAAGTGGCCTCTTGTCTGGCCTGGAGGAAATACTaGGAGATCTCGCAGGTCACTGCCTTCCCGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SKVASCLAWRKY*EISQVTAFPLQ Trigger: CTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 90 bp | TGTGCTTTCTCAAAAGTGGCCTCTTGTCTGGCCTGGAGGAAATACTaGGAGATCTCGCAGGTCACTGCCTTCCCGCTGCAGTCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: CAFSKVASCLAWRKY*EISQVTAFPLQSAW Trigger: CCATGCTGACTGCAGCGGGAAGGCAGTGACCTGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGAGAAAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 72 bp | AGAGGACCCCAGCAGGTGGTTCAGGGTTTGGGTCTCTaGTGTCACCTGGAACTCCACTTGAGTCTTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RGPQQVVQGLGL*CHLELHLSLHC Trigger: ACAGTGAAGACTCAAGTGGAGTTCCAGGTGACATCAGAGACCCAAACCCTGAACCACCTGCTGGGGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 90 bp | TGTACCAAGTCCACTGAGGCCTCAAAGATAACAGGTGAATCCTGTTaGGTCTCAGTGCTCCCCTGGAAATCTGTGATGCCTTCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CTKSTEASKITGESC*VSVLPWKSVMPSRE Trigger: CTCCCTGGAAGGCATCACAGATTTCCAGGGGAGCACTGAGACCAAACAGGATTCACCTGTTATCTTTGAGGCCTCAGTGGACTTGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS TCA 72 bp | GGCCTGGTGGACCTTGATGAAGAAGCTTGCTGTCTGTaGAGTCCCAGAAACAACAACAGCGCAGAAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLVDLDEEACCL*SPRNNNSAERK Trigger: CTTCCTTTCTGCGCTGTTGTTGTTTCTGGGACTTCACAGACAGCAAGCTTCTTCATCAAGGTCCACCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | ATGGAGACACTGGGGCCACCTCTAGAAACCTGCATGTaGCTGATGAACCAATGTGCTTTCTCAAAAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: METLGPPLETCM*LMNQCAFSKVA Trigger: GGCCACTTTTGAGAAAGCACATTGGTTCATCAGCAACATGCAGGTTTCTAGAGGTGGCCCCAGTGTCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | ACCTCTAGAAACCTGCATGTTGCTGATGAACCAATGTaGTTTCTCAAAAGTGGCCTCTTGTCTGGCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSRNLHVADEPM*FLKSGLLSGLE Trigger: CTCCAGGCCAGACAAGAGGCCACTTTTGAGAAAGCACATTGGTTCATCAGCAACATGCAGGTTTCTAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | GCTGATGAACCAATGTGCTTTCTCAAAAGTGGCCTCTaGTCTGGCCTGGAGGAAATACTTGGAGATCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: ADEPMCFLKSGL*SGLEEILGDLA Trigger: TGCGAGATCTCCAAGTATTTCCTCCAGGCCAGACAAGAGGCCACTTTTGAGAAAGCACATTGGTTCATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS CAA 72 bp | GGGAGCCAGGATGTTAAGTGGCATGATCTGTTGAGCTaGATACAGAGAGGTGGAGATCTGGCAGATGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: GSQDVKWHDLLS*IQRGGDLADVV Trigger: AACTACATCTGCCAGATCTCCACCTCTCTGTATCAAGCTCAACAGATCATGCCACTTAACATCCTGGCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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| CDS GCA 72 bp | ATCACCATGGAGACACTGGGGCCACCTCTAGAAACCTaGATGTTGCTGATGAACCAATGTGCTTTCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ITMETLGPPLET*MLLMNQCAFSK Trigger: TTTTGAGAAAGCACATTGGTTCATCAGCAACATGCAGGTTTCTAGAGGTGGCCCCAGTGTCTCCATGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043422.8 |
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