Pregenerated sensors for TAPBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024308Ensembl transcript IDs: ENSMUST00000025161.10, ENSMUST00000172619.8, ENSMUST00000234247.2, ENSMUST00000234320.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTaGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGAGGGTTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SSAVCHSEAEGQVDL*DFEASLVGLVRVQD Trigger: GTCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR TCA 90 bp | GACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTaGGGGTTCAGGACAGCCAGCCAAGGCTACATAGAGAGACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: DRWISGTSRPAWLAW*GFRTASQGYIERPC Trigger: ACAAGGTCTCTCTATGTAGCCTTGGCTGGCTGTCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCCATCTGGGCCAGAGATaGGGGTGGCTTCCACAGACG | + |
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Preference number: 2 (lower is better) Translates to: FVTPRQRDRWISGTSRPAHLGQR*GWLPQT Trigger: CGTCTGTGGAAGCCACCCTCATCTCTGGCCCAGATG...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCATGGGGCAGGGGCTACTaGAGTCATCTGGGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAWGRGY*SHLGQR Trigger: TCTCTGGCCCAGATGACTCCAGTAGCCCCTGCCCCA...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCACGAGGCCAGCCTGGTTaGCTTGGTGAGGGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FVKGRDPPGPEMVKVDQARGQPG*LGEGSG Trigger: TCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCG...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCATCTGGGCCAGAGATaGGGGTGGCTTCCACAGACG | + |
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Preference number: 2 (lower is better) Translates to: VQCRLSLRGRGTGGSLGLHLGQR*GWLPQT Trigger: CGTCTGTGGAAGCCACCCTCATCTCTGGCCCAGATG...AAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCATTCGTCCTAATCCCCTaGCCAGTGGTTCTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAFVLIP*PVVLNL Trigger: AAGGTTGAGAACCACTGGCCAGGGGATTAGGACGAA...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTAGGCAGAGGGACAGGTaGATCTCTGGGACTTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSRQRDR*ISGTSR Trigger: CCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCT...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCATCTAGAATCTTAAGATaGTATGAAGACCTTTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: FVKGRDPPGPEMVKVDQASRILR*YEDLSS Trigger: GGACGAAAGGTCTTCATAGCATCTTAAGATTCTAGA...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCGAGATCCACTGCCTCTaGCTCCCGACTGTGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFEIHCL*LPTVGI Trigger: GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTC...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCCGAGGCCAGCCTGGTTaGCTTGGTGAGGGTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFRGQPG*LGEGSG Trigger: TCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCG...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCATCCGAGCTATTCAATaGAGGGAGAAGAAGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFIRAIQ*REKKRR Trigger: TCTTCTCTTCTTCTCCCTCCATTGAATAGCTCGGAT...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR TCA 72 bp | ATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTaGGGGTTCAGGACAGCCAGCCAAGGCTACATAGAG | + |
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Preference number: 3 (lower is better) Translates to: ISGTSRPAWLAW*GFRTASQGYIE Trigger: CTCTATGTAGCCTTGGCTGGCTGTCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTGCCAGCCTGGTTGGCTaGGTGAGGGTTCAGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSASLVG*VRVQDS Trigger: GCTGTCCTGAACCCTCACCAAGCCAACCAGGCTGGC...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CAA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTGCCAGCCTGGTTGGCTaGGTGAGGGTTCAGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KCQRSTASASRLWASNECASLVG*VRVQDS Trigger: GCTGTCCTGAACCCTCACCAAGCCAACCAGGCTGGC...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR CCA 72 bp | CAATGGAGGGAGAAGAAGAGAAGAAGGCTGTTGTTCTaGGGCAGGGGCTACTGGAGTCATCTGGGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QWREKKRRRLLF*GRGYWSHLGQR Trigger: TCTCTGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCCCTCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR CCA 72 bp | CCACAGGTTATGAACCCGCCTCTCTGGCGCATACACTaGTTCTTCTCAACCCTGGGACTCTACGCATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PQVMNPPLWRIH*FFSTLGLYACV Trigger: CACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAGAGGCGGGTTCATAACCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCAAGAGAAGAAGGCTGTaGTTCTGGGGCAGGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LWRIHWFFSTLGLYACVFKRRRL*FWGRGY Trigger: GTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTT...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR CCA 72 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTaGGCATCAAATGAGTGTGGCGCTAAGTCTCGCTTT | + |
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Preference number: 3 (lower is better) Translates to: KCQRSTASASRL*ASNECGAKSRF Trigger: AAAGCGAGACTTAGCGCCACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR CCA 72 bp | CCGACTGACCTGAAACTCCCTATTTGTAGATCAGGCTaGCATGGAAATGTCAGAGATCCACTGCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: PTDLKLPICRSG*HGNVRDPLPLP Trigger: AGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGCCTGATCTACAAATAGGGAGTTTCAGGTCAGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCCTGCCACCTCCAGGGTaGCGTCAGCACTGCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPALPPPG*RQHCAP Trigger: CGGGGCGCAGTGCTGACGTCACCCTGGAGGTGGCAG...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCACTGCCACCTCCAGGGTaGCGTCAGCACTGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQALPPPG*RQHCAP Trigger: CGGGGCGCAGTGCTGACGTCACCCTGGAGGTGGCAG...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCTGGGGCGGAGGCGCCTaGGGGGTACCGCCTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGIWGGGA*GVPPEG Trigger: GCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCA...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCACTCGATGGAGGGCCCTaGGAAGCCTGCCACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQALDGGP*EACHLQ Trigger: CTGGAGGTGGCAGGCTTCTCAGGGCCCTCCATCGAG...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCACCCTTTCCCCTGTGCTaGCGTCGCCACTCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAPFPLC*RRHSSP Trigger: TGGGCTGGAGTGGCGACGCCAGCACAGGGGAAAGGG...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCGCAGCCAACAGCAGGTaGCCCTTTCCCCTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPAAANSR*PFPLCW Trigger: CCAGCACAGGGGAAAGGGTCACCTGCTGTTGGCTGC...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCACAGGCCACCCCCACCTaGATCCTCCACGAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAQATPT*ILHEPA Trigger: TGCTGGTTCGTGGAGGATGCAGGTGGGGGTGGCCTG...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTTGGGGCGGAGGCGCCTaGGGGGTACCGCCTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSWGGGA*GVPPEG Trigger: GCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCA...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGACTCTGGGGGCCTTGTaGACAGTCAGCTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AEGQVDLWDFEASLVGLVTLGAL*TVSSRE Trigger: CTCCCTGGAGCTGACTGTGCACAAGGCCCCCAGAGT...CACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCAGGTCCCCTGGGTCCATaGCGCAGTAGCAGTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAGPLGP*RSSSVA Trigger: TGCCACACTGCTACTGCGCCATGGACCCAGGGGACC...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGGAGCCATCGGAATGGTaGCGGATGGTGGAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AEGQVDLWDFEASLVGLVEPSEW*RMVESH Trigger: GTGGCTCTCCACCATCCGCCACCATTCCGATGGCTC...CACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCAGCGCAGGTCCAGCACTaGATCCTTTCCCAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAAQVQH*ILSQLD Trigger: GTCCAGCTGGGAAAGGATGCAGTGCTGGACCTGCGC...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GACCTTTCCGTCTCTAGACTACTGCTGTGGGCTGTCCCTGAGGTCTCTAGAATCGCTCATCTCGCAGTGTaGGGCGGAGGCGCCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: DLSVSRLLLWAVPEVSRIAHLAV*GGGACG Trigger: CCCGCAGGCGCCTCCGCCCCACACTGCGAGATGAGC...GATTCTAGAGACCTCAGGGACAGCCCACAGCAGTAGTCTAGAGACGGAAAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCCGAGGGGCAGGGTTATaGGTGAGGACGGTCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGIRGAGL*VRTVST Trigger: GGTGCTGACCGTCCTCACCCATAACCCTGCCCCTCG...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCGAGCCATCGGAATGGTaGCGGATGGTGGAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPAEPSEW*RMVESH Trigger: GTGGCTCTCCACCATCCGCCACCATTCCGATGGCTC...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGGCCAGGGCAGGGTTATGGGTaGGGACGGTCAGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: EEKKAVVLGQGLLESSGPGQGYG*GRSAPL Trigger: CAGTGGTGCTGACCGTCCTCACCCATAACCCTGCCC...TGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCACTCTGGGGGCCTTGTaGACAGTCAGCTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGITLGAL*TVSSRE Trigger: CTCCCTGGAGCTGACTGTGCACAAGGCCCCCAGAGT...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCGTGACTGGAGGTAGCTaGAGGTGCCCAGACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGIVTGGS*RCPDWL Trigger: CAGCCAGTCTGGGCACCTGCAGCTACCTCCAGTCAC...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GTCTACAGAGTGAGTTCCAGGACAGCCGGGACTATACAGAGAAATCCTGTCTCCGGGGCGGCGGTCCCCTaGGTCCATGGCGCAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VYRVSSRTAGTIQRNPVSGAAVP*VHGAVA Trigger: TGCTACTGCGCCATGGACCCAGGGGACCGCCGCCCC...GGAGACAGGATTTCTCTGTATAGTCCCGGCTGTCCTGGAACTCACTCTGTAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTCGGCCAGCCCGGGGGTaGCAGCCAACAGCAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSRPARG*QPTAGD Trigger: GTCACCTGCTGTTGGCTGCCACCCCCGGGCTGGCCG...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GTCTACAGAGTGAGTTCCAGGACAGCCGGGACTATACAGAGAAATCCTGTCTCCCGGCCAGCCCGGGGGTaGCAGCCAACAGCAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VYRVSSRTAGTIQRNPVSRPARG*QPTAGD Trigger: GTCACCTGCTGTTGGCTGCCACCCCCGGGCTGGCCG...GGAGACAGGATTTCTCTGTATAGTCCCGGCTGTCCTGGAACTCACTCTGTAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| 3UTR CAA 72 bp | GTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTaGGTGAGGGTTCAGGACAGCCAGCCAAGGCTACAT | + |
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Preference number: 4 (lower is better) Translates to: VDLWDFEASLVG*VRVQDSQPRLH Trigger: ATGTAGCCTTGGCTGGCTGTCCTGAACCCTCACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCCATGCTGCTTGGCAGTaGCTGGAGGTAGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGIHAAWQ*LEVAAG Trigger: ACCTGCAGCTACCTCCAGTCACTGCCAAGCAGCATG...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCCTCGATGGAGGGCCCTaGGAAGCCTGCCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWRIHWFFSTLGLYACVFLDGGP*EACHLQ Trigger: CTGGAGGTGGCAGGCTTCTCAGGGCCCTCCATCGAG...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGGTGTTAGAGACACTCTaGGGGCCTTGTGCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGQVDLWDFEASLVGLVVLETL*GPCAQS Trigger: TGACTGTGCACAAGGCCCCCAGAGTGTCTCTAACAC...CACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCTCTAGAACTTCCTCCTaGGCCGCCTCTGAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGISRTSS*AASELP Trigger: TGGGAGCTCAGAGGCGGCCCAGGAGGAAGTTCTAGA...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCACAGAGCCATCGGAATaGTGGCGGATGGTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGMEMSEIHCLCLPTVGITEPSE*WRMVES Trigger: GCTCTCCACCATCCGCCACCATTCCGATGGCTCTGT...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GTCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTACAGAGCCATCGGAATaGTGGCGGATGGTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQCRLSLRGRGTGGSLGLTEPSE*WRMVES Trigger: GCTCTCCACCATCCGCCACCATTCCGATGGCTCTGT...AAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTTGAGTTCCTGGGAATaGTCAGGCTGGCAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPALSSWE*SGWQLW Trigger: CCACAGCTGCCAGCCTGACCATTCCCAGGAACTCAA...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGTGTGGCCTTCTCCTTTaGGACTTCAGGAATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGQVDLWDFEASLVGLVCGLLL*DFRNGP Trigger: TGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACA...CACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR GCA 90 bp | GACCTTTCCGTCTCTAGACTACTGCTGTGGGCTGTCCCTGAGGTCTCTAGAATCCAGGCCACCCCCACCTaGATCCTCCACGAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLSVSRLLLWAVPEVSRIQATPT*ILHEPA Trigger: TGCTGGTTCGTGGAGGATGCAGGTGGGGGTGGCCTG...GATTCTAGAGACCTCAGGGACAGCCCACAGCAGTAGTCTAGAGACGGAAAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTAAAGGGCCGAGACCCACCAGGCCCGGAGATGGTAAAGGTGGACCAGGCAATCCCAAGCTGCAAATaGCGTAGCCTTTTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVKGRDPPGPEMVKVDQAIPSCK*RSLFLG Trigger: GCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGAT...TGCCTGGTCCACCTTTACCATCTCCGGGCCTGGTGGGTCTCGGCCCTTTACGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGTCCCCTGGGTCCATaGCGCAGTAGCAGTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSGPLGP*RSSSVA Trigger: TGCCACACTGCTACTGCGCCATGGACCCAGGGGACC...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTCCCTTTCCCCTGTGCTaGCGTCGCCACTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSPFPLC*RRHSSP Trigger: TGGGCTGGAGTGGCGACGCCAGCACAGGGGAAAGGG...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCGTGTTAGAGACACTCTaGGGGCCTTGTGCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPAVLETL*GPCAQS Trigger: TGACTGTGCACAAGGCCCCCAGAGTGTCTCTAACAC...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTCCGCAGGGAAGAAGTaGGATGCAAGACAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVTPRQRDRWISGTSRPASAGKK*DARQSS Trigger: ACTGCTCTGTCTTGCATCCCACTTCTTCCCTGCGGA...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGGCCATGGGAATGGTCAGGCTaGCAGCTGTGGCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEKKAVVLGQGLLESSGPWEWSG*QLWPSP Trigger: AGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCA...TGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTGCAGCCAACAGCAGGTaGCCCTTTCCCCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCQRSTASASRLWASNECAANSR*PFPLCW Trigger: CCAGCACAGGGGAAAGGGTCACCTGCTGTTGGCTGC...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGGCCAGGTCAGCACCACTGTTaGCATGGTGATGACGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKKAVVLGQGLLESSGPGQHHC*HGDDDR Trigger: CCTGTCGTCATCACCATGGCAACAGTGGTGCTGACC...TGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTATCCCAAGCTGCAAATaGCGTAGCCTTTTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQCRLSLRGRGTGGSLGLIPSCK*RSLFLG Trigger: GCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGAT...AAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGTGACTGGAGGTAGCTaGAGGTGCCCAGACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSVTGGS*RCPDWL Trigger: CAGCCAGTCTGGGCACCTGCAGCTACCTCCAGTCAC...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTCGAGGGGCAGGGTTATaGGTGAGGACGGTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KCQRSTASASRLWASNECRGAGL*VRTVST Trigger: GGTGCTGACCGTCCTCACCCATAACCCTGCCCCTCG...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GTCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTTCCGCAGGGAAGAAGTaGGATGCAAGACAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQCRLSLRGRGTGGSLGLSAGKK*DARQSS Trigger: ACTGCTCTGTCTTGCATCCCACTTCTTCCCTGCGGA...AAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCTGGTTGGCTTGGTGTTGAGACTTCAGGAATaGTCCAGTAGGCAGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGQVDLWDFEASLVGLVLRLQE*SSRQLP Trigger: TGGTAGCTGCCTACTGGACCATTCCTGAAGTCTCAA...CACCAAGCCAACCAGGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025161.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGGCCATTGAGTTCCTGGGAATaGTCAGGCTGGCAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKKAVVLGQGLLESSGPLSSWE*SGWQLW Trigger: CCACAGCTGCCAGCCTGACCATTCCCAGGAACTCAA...TGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTGAGTGCTGGATACGCTaGCCAGCAGCCAATCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KCQRSTASASRLWASNECECWIR*PAANPR Trigger: ACGGGGATTGGCTGCTGGTCAGCGTATCCAGCACTC...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR TCA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTGAGTGCTGGATACGCTaGCCAGCAGCCAATCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSECWIR*PAANPR Trigger: ACGGGGATTGGCTGCTGGTCAGCGTATCCAGCACTC...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR GCA 90 bp | GTCTACAGAGTGAGTTCCAGGACAGCCGGGACTATACAGAGAAATCCTGTCTCCGCGCAGGTCCAGCACTaGATCCTTTCCCAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYRVSSRTAGTIQRNPVSAQVQH*ILSQLD Trigger: GTCCAGCTGGGAAAGGATGCAGTGCTGGACCTGCGC...GGAGACAGGATTTCTCTGTATAGTCCCGGCTGTCCTGGAACTCACTCTGTAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGCATCCTTTCCCAGCTaGACTCGAGGGGCAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSASFPS*TRGAGL Trigger: TAACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGC...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTGCAGGTGCCCAGACTaGCTGACAGAGCCATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWRIHWFFSTLGLYACVFCRCPD*LTEPSE Trigger: TTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCA...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTGGGAATGGTCAGGCTaGCAGCTGTGGCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWRIHWFFSTLGLYACVFWEWSG*QLWPSP Trigger: AGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCA...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTTCTAGAACTTCCTCCTaGGCCGCCTCTGAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAYTGSSQPWDSTHVCSSRTSS*AASELP Trigger: TGGGAGCTCAGAGGCGGCCCAGGAGGAAGTTCTAGA...AGAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCTCAGGCTGGCAGCTGTaGCCTTCTCCTTTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LWRIHWFFSTLGLYACVFSGWQL*PSPLRL Trigger: AAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGA...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTCCGGGTCATCCACCTTaGAGTATAGCTTTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSPGHPP*SIALGQ Trigger: TTGACCCAAAGCTATACTTCAAGGTGGATGACCCGG...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTTGTGGCCTTCTCCTTTaGGACTTCAGGAATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSCGLLL*DFRNGP Trigger: TGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACA...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCGGGGCGGCGGTCCCCTaGGTCCATGGCGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFGAAVP*VHGAVA Trigger: TGCTACTGCGCCATGGACCCAGGGGACCGCCGCCCC...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTTCAGGCTGGCAGCTGTaGCCTTCTCCTTTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KCQRSTASASRLWASNECSGWQL*PSPLRL Trigger: AAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGA...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTACTTCTTTGAGTTCCTaGGAATGGTCAGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEEKKAVVLGQGLLESSTSLSS*EWSGWQ Trigger: CTGCCAGCCTGACCATTCCCAGGAACTCAAAGAAGT...AGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTCCGGGTCATCCACCTTaGAGTATAGCTTTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCQRSTASASRLWASNECPGHPP*SIALGQ Trigger: TTGACCCAAAGCTATACTTCAAGGTGGATGACCCGG...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR TCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCCATGCTGCTTGGCAGTaGCTGGAGGTAGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFHAAWQ*LEVAAG Trigger: ACCTGCAGCTACCTCCAGTCACTGCCAAGCAGCATG...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCGCATCCTTTCCCAGCTaGACTCGAGGGGCAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFASFPS*TRGAGL Trigger: TAACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGC...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTCGTAACTGCCTTTACTACTGTTGTGAATCCTAATGTCTGGTATTTCACTTCTTTGAGTTCCTaGGAATGGTCAGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYFVTAFTTVVNPNVWYFTSLSS*EWSGWQ Trigger: CTGCCAGCCTGACCATTCCCAGGAACTCAAAGAAGT...GAAATACCAGACATTAGGATTCACAACAGTAGTAAAGGCAGTTACGAAGTAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS GCA 90 bp | GAACGGGATGAAGCGGCTCATCTCGCAGTGTGGGGCGGAGGCGCCTaGGGGGTACCGCCTGAAGGCGGCCAGGAGCATTCCCGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERDEAAHLAVWGGGA*GVPPEGGQEHSRRV Trigger: GACCCGGCGGGAATGCTCCTGGCCGCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCACACTGCGAGATGAGCCGCTTCATCCCGTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
||
| CDS CCA 90 bp | CTTCGCCGAGGCAGGGAACGGGATGAAGCGGCTCATCTCGCAGTGTaGGGCGGAGGCGCCTGCGGGGTACCGCCTGAAGGCGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRGRERDEAAHLAV*GGGACGVPPEGGQE Trigger: CTCCTGGCCGCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCACACTGCGAGATGAGCCGCTTCATCCCGTTCCCTGCCTCGGCGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
||
| CDS GCA 90 bp | ACGCTGACCAGCAGCCAATCCCCGTCCAGGGCCCGCGGGCAGTTCTaGTCCGGACTCAGACTTCTAGCCCACTTCGCCGAGGCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLTSSQSPSRARGQF*SGLRLLAHFAEAGN Trigger: GTTCCCTGCCTCGGCGAAGTGGGCTAGAAGTCTGAGTCCGGAGCAGAACTGCCCGCGGGCCCTGGACGGGGATTGGCTGCTGGTCAGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS GCA 90 bp | AGGAGGGCCTGCGTCCAGAGAGGGAGAACCTTCCAGGGCGGAGGGTaGGTAGGCGAAGCGCAGGTCCAGCACTGCATCCTTTCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRACVQRGRTFQGGG*VGEAQVQHCILSQL Trigger: CAGCTGGGAAAGGATGCAGTGCTGGACCTGCGCTTCGCCTACGCACCCTCCGCCCTGGAAGGTTCTCCCTCTCTGGACGCAGGCCCTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
||
| CDS GCA 90 bp | CCCAGTCCACGGGCCCCAGGGCTCATCGTCATCCCAAGCTGCAAATaGCGTAGCCTTTTCCTGGGCTGGTGGCATTCTCCCGGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRAPGLIVIPSCK*RSLFLGWWHSPGQP Trigger: GGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGATGACGATGAGCCCTGGGGCCCGTGGACTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS GCA 90 bp | ACCTTCCAGGGCGGAGGGTGCGTAGGCGAAGCGCAGGTCCAGCACTaGATCCTTTCCCAGCTGGACTCGAGGGGCAGGGTTATGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TFQGGGCVGEAQVQH*ILSQLDSRGRVMGE Trigger: CTCACCCATAACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGCAGTGCTGGACCTGCGCTTCGCCTACGCACCCTCCGCCCTGGAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | CAGGGCTCATCGTCATCCCAAGCTGCAAATGCCGTAGCCTTTTCCTaGGCTGGTGGCATTCTCCCGGCCAGCCCGGGGGTGGCAGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: QGSSSSQAANAVAFS*AGGILPASPGVAAN Trigger: GTTGGCTGCCACCCCCGGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGATGACGATGAGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | ATCGTCATCCCAAGCTGCAAATGCCGTAGCCTTTTCCTGGGCTGGTaGCATTCTCCCGGCCAGCCCGGGGGTGGCAGCCAACAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IVIPSCKCRSLFLGW*HSPGQPGGGSQQQV Trigger: CACCTGCTGTTGGCTGCCACCCCCGGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGATGACGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | CTCATCGTCATCCCAAGCTGCAAATGCCGTAGCCTTTTCCTGGGCTaGTGGCATTCTCCCGGCCAGCCCGGGGGTGGCAGCCAACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIVIPSCKCRSLFLG*WHSPGQPGGGSQQQ Trigger: CTGCTGTTGGCTGCCACCCCCGGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGATGACGATGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | CAGACCCTCCGCAGGGAAGAAGTGGGATGCAAGACAGAGCAGTTCTaGGGGTGCCTCTCCTGGGGCAGCCCACACAACGGGTGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTLRREEVGCKTEQF*GCLSWGSPHNGCWC Trigger: ACACCAGCACCCGTTGTGTGGGCTGCCCCAGGAGAGGCACCCCCAGAACTGCTCTGTCTTGCATCCCACTTCTTCCCTGCGGAGGGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | CCTCTGAGCTCCCACTTGACCTCCAGACCCTCCGCAGGGAAGAAGTaGGATGCAAGACAGAGCAGTTCTGGGGGTGCCTCTCCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSSHLTSRPSAGKK*DARQSSSGGASPGA Trigger: TGCCCCAGGAGAGGCACCCCCAGAACTGCTCTGTCTTGCATCCCACTTCTTCCCTGCGGAGGGTCTGGAGGTCAAGTGGGAGCTCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | CCATGCTGCTTGGCAGTGACTGGAGGTAGCTGCAGGTGCCCAGACTaGCTGACAGAGCCATCGGAATGGTGGCGGATGGTGGAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PCCLAVTGGSCRCPD*LTEPSEWWRMVESH Trigger: GTGGCTCTCCACCATCCGCCACCATTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCAGCTACCTCCAGTCACTGCCAAGCAGCATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | GAAGCCTGCCACCTCCAGGGTGACGTCAGCACTGCGCCCCGATGCTaGCAGGCTAGAGTGGTACACCCGACAGACATAGTGAACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EACHLQGDVSTAPRC*QARVVHPTDIVNSM Trigger: CATGGAGTTCACTATGTCTGTCGGGTGTACCACTCTAGCCTGCCAGCATCGGGGCGCAGTGCTGACGTCACCCTGGAGGTGGCAGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | GGAGGTAGCTGCAGGTGCCCAGACTGGCTGACAGAGCCATCGGAATaGTGGCGGATGGTGGAGAGCCACGTCTTCCCCTCAACCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGSCRCPDWLTEPSE*WRMVESHVFPSTFL Trigger: TAGAAAGGTTGAGGGGAAGACGTGGCTCTCCACCATCCGCCACCATTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCAGCTACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGTGCCGTTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCAGGGAGACCTGTCCTaGCAGGTAGGGCAGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VQCRLSLRGRGTGGSLGLQGDLS*QVGQVY Trigger: GTACACCTGCCCTACCTGCAAGGACAGGTCTCCCTG...AAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAACGGCACTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | TCCAGCACTGCATCCTTTCCCAGCTGGACTCGAGGGGCAGGGTTATaGGTGAGGACGGTCAGCACCACTGTTGCCATGGTGATGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSTASFPSWTRGAGL*VRTVSTTVAMVMTT Trigger: TGTCGTCATCACCATGGCAACAGTGGTGCTGACCGTCCTCACCCATAACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGCAGTGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 90 bp | GGTAGCTGCAGGTGCCCAGACTGGCTGACAGAGCCATCGGAATGGTaGCGGATGGTGGAGAGCCACGTCTTCCCCTCAACCTTTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSCRCPDWLTEPSEW*RMVESHVFPSTFLE Trigger: TTCTAGAAAGGTTGAGGGGAAGACGTGGCTCTCCACCATCCGCCACCATTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCAGCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGCGCATACACTGGTTCTTCTCAACCCTGGGACTCTACGCATGTGTGTTCCCTCTGAGCTCCCACTaGACCTCCAGACCCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWRIHWFFSTLGLYACVFPLSSH*TSRPSA Trigger: TGCGGAGGGTCTGGAGGTCAAGTGGGAGCTCAGAGG...GAACACACATGCGTAGAGTCCCAGGGTTGAGAAGAACCAGTGTATGCGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | TTTGTCACTCCGAGGCAGAGGGACAGGTGGATCTCTGGGACTTCGAGGCCAGCCCTGTGGCCTTCTCCTTaGAGACTTCAGGAATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FVTPRQRDRWISGTSRPALWPSP*RLQEWS Trigger: GGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAG...GGCTGGCCTCGAAGTCCCAGAGATCCACCTGTCCCTCTGCCTCGGAGTGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | GCTGGCATGGAAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCGCCGGGTCATCCACCTaGAAGTATAGCTTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGMEMSEIHCLCLPTVGIAGSST*KYSFGS Trigger: TGACCCAAAGCTATACTTCAAGGTGGATGACCCGGC...GATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTTCCATGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTCCGTCTCTAGACTACTGCTGTGGGCTGTCCCTGAGGTCTCTAGAATCCAGGGAGACCTGTCCTaGCAGGTAGGGCAGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DLSVSRLLLWAVPEVSRIQGDLS*QVGQVY Trigger: GTACACCTGCCCTACCTGCAAGGACAGGTCTCCCTG...GATTCTAGAGACCTCAGGGACAGCCCACAGCAGTAGTCTAGAGACGGAAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGAAGAAGGCTGTTGTTCTGGGGCAGGGGCTACTGGAGTCATCTGGGCCAGCCGGGTCATCCACCTaGAAGTATAGCTTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EEKKAVVLGQGLLESSGPAGSST*KYSFGS Trigger: TGACCCAAAGCTATACTTCAAGGTGGATGACCCGGC...TGGCCCAGATGACTCCAGTAGCCCCTGCCCCAGAACAACAGCCTTCTTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS-3UTR CAA 90 bp | AAATGTCAGAGATCCACTGCCTCTGCCTCCCGACTGTGGGCATCAAATGAGTGTCTGTGGCCTTCTCCTTaGAGACTTCAGGAATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCQRSTASASRLWASNECLWPSP*RLQEWS Trigger: GGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAG...ACACTCATTTGATGCCCACAGTCGGGAGGCAGAGGCAGTGGATCTCTGACATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS GCA 72 bp | GAAGCGGCTCATCTCGCAGTGTGGGGCGGAGGCGCCTaGGGGGTACCGCCTGAAGGCGGCCAGGAGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: EAAHLAVWGGGA*GVPPEGGQEHS Trigger: GGAATGCTCCTGGCCGCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCACACTGCGAGATGAGCCGCTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
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| CDS CCA 72 bp | GGCAGGGAACGGGATGAAGCGGCTCATCTCGCAGTGTaGGGCGGAGGCGCCTGCGGGGTACCGCCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRERDEAAHLAV*GGGACGVPPEG Trigger: GCCTTCAGGCGGTACCCCGCAGGCGCCTCCGCCCCACACTGCGAGATGAGCCGCTTCATCCCGTTCCCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
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| CDS GCA 72 bp | AGCAGCCAATCCCCGTCCAGGGCCCGCGGGCAGTTCTaGTCCGGACTCAGACTTCTAGCCCACTTCGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSQSPSRARGQF*SGLRLLAHFAE Trigger: CTCGGCGAAGTGGGCTAGAAGTCTGAGTCCGGAGCAGAACTGCCCGCGGGCCCTGGACGGGGATTGGCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 |
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| CDS GCA 72 bp | GGCGGAGGGTGCGTAGGCGAAGCGCAGGTCCAGCACTaGATCCTTTCCCAGCTGGACTCGAGGGGCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGGCVGEAQVQH*ILSQLDSRGRV Trigger: AACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGCAGTGCTGGACCTGCGCTTCGCCTACGCACCCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | GCTTTGGGTCAAGATCTGGCCGGGGCGGCGGTCCCCTaGGTCCATGGCGCAGTAGCAGTGTGGCAGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALGQDLAGAAVP*VHGAVAVWQVS Trigger: AGAAACCTGCCACACTGCTACTGCGCCATGGACCCAGGGGACCGCCGCCCCGGCCAGATCTTGACCCAAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
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| CDS CCA 72 bp | CCAAGCTGCAAATGCCGTAGCCTTTTCCTGGGCTGGTaGCATTCTCCCGGCCAGCCCGGGGGTGGCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSCKCRSLFLGW*HSPGQPGGGSQ Trigger: TTGGCTGCCACCCCCGGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | ATCCCAAGCTGCAAATGCCGTAGCCTTTTCCTGGGCTaGTGGCATTCTCCCGGCCAGCCCGGGGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPSCKCRSLFLG*WHSPGQPGGGS Trigger: GCTGCCACCCCCGGGCTGGCCGGGAGAATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CAA 90 bp | TACCGCCTGAAGGCGGCCAGGAGCATTCCCGCCGGGTCATCCACCTaGAAGTATAGCTTTGGGTCAAGATCTGGCCGGGGCGGCGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: YRLKAARSIPAGSST*KYSFGSRSGRGGGP Trigger: GGGACCGCCGCCCCGGCCAGATCTTGACCCAAAGCTATACTTCAAGGTGGATGACCCGGCGGGAATGCTCCTGGCCGCCTTCAGGCGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
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| CDS CAA 90 bp | CACTCTGGGGGCCTTGTGCACAGTCAGCTCCAGGGAGACCTGTCCTaGCAGGTAGGGCAGGTGTACCGTAGCCAGGTAGACACCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSGGLVHSQLQGDLS*QVGQVYRSQVDTLL Trigger: CAGGAGGGTGTCTACCTGGCTACGGTACACCTGCCCTACCTGCAAGGACAGGTCTCCCTGGAGCTGACTGTGCACAAGGCCCCCAGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS GCA 72 bp | TGCCACCTCCAGGGTGACGTCAGCACTGCGCCCCGATaGTGGCAGGCTAGAGTGGTACACCCGACAGACATA | + |
|
Preference number: 6 (lower is better) Translates to: CHLQGDVSTAPR*WQARVVHPTDI Trigger: TATGTCTGTCGGGTGTACCACTCTAGCCTGCCAGCATCGGGGCGCAGTGCTGACGTCACCCTGGAGGTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | TGCAGGTGCCCAGACTGGCTGACAGAGCCATCGGAATaGTGGCGGATGGTGGAGAGCCACGTCTTCCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRCPDWLTEPSE*WRMVESHVFPS Trigger: TGAGGGGAAGACGTGGCTCTCCACCATCCGCCACCATTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | CACCTCCAGGGTGACGTCAGCACTGCGCCCCGATGCTaGCAGGCTAGAGTGGTACACCCGACAGACATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLQGDVSTAPRC*QARVVHPTDIV Trigger: CACTATGTCTGTCGGGTGTACCACTCTAGCCTGCCAGCATCGGGGCGCAGTGCTGACGTCACCCTGGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS GCA 72 bp | CAGTGTGGCAGGTTTCTTAGACAGGCCACCCCCACCTaGATCCTCCACGAACCAGCACTCGATCGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QCGRFLRQATPT*ILHEPALDRLW Trigger: CCAGAGGCGATCGAGTGCTGGTTCGTGGAGGATGCAGGTGGGGGTGGCCTGTCTAAGAAACCTGCCACACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025161.10 ENSMUST00000172619.8 ENSMUST00000234247.2 ENSMUST00000234320.2 |
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| CDS GCA 72 bp | AGTCCACGGGCCCCAGGGCTCATCGTCATCCCAAGCTaGAAATGCCGTAGCCTTTTCCTGGGCTGGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPRAPGLIVIPS*KCRSLFLGWWH Trigger: ATGCCACCAGCCCAGGAAAAGGCTACGGCATTTGCAGCTTGGGATGACGATGAGCCCTGGGGCCCGTGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS GCA 72 bp | CCATGCTGCTTGGCAGTGACTGGAGGTAGCTGCAGGTaGCCAGACTGGCTGACAGAGCCATCGGAATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCCLAVTGGSCR*PDWLTEPSEWW Trigger: CCACCATTCCGATGGCTCTGTCAGCCAGTCTGGGCACCTGCAGCTACCTCCAGTCACTGCCAAGCAGCATGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | GCATCCTTTCCCAGCTGGACTCGAGGGGCAGGGTTATaGGTGAGGACGGTCAGCACCACTGTTGCCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASFPSWTRGAGL*VRTVSTTVAMV Trigger: CACCATGGCAACAGTGGTGCTGACCGTCCTCACCCATAACCCTGCCCCTCGAGTCCAGCTGGGAAAGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | CAGCCCACACAACGGGTGCTGGTGTTAGAGACACTCTaGGGGCCTTGTGCACAGTCAGCTCCAGGGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: QPTQRVLVLETL*GPCAQSAPGRP Trigger: AGGTCTCCCTGGAGCTGACTGTGCACAAGGCCCCCAGAGTGTCTCTAACACCAGCACCCGTTGTGTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CAA 72 bp | GGCCTTGTGCACAGTCAGCTCCAGGGAGACCTGTCCTaGCAGGTAGGGCAGGTGTACCGTAGCCAGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLVHSQLQGDLS*QVGQVYRSQVD Trigger: GTCTACCTGGCTACGGTACACCTGCCCTACCTGCAAGGACAGGTCTCCCTGGAGCTGACTGTGCACAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CAA 90 bp | TCAACCTTTCTAGAACTTCCTCCTGGGCCGCCTCTGAGCTCCCACTaGACCTCCAGACCCTCCGCAGGGAAGAAGTGGGATGCAAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: STFLELPPGPPLSSH*TSRPSAGKKWDARQ Trigger: CTGTCTTGCATCCCACTTCTTCCCTGCGGAGGGTCTGGAGGTCAAGTGGGAGCTCAGAGGCGGCCCAGGAGGAAGTTCTAGAAAGGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CAA 72 bp | TGGGAATGGTCAGGCTGGCAGCTGTGGCCTTCTCCTTaGAGACTTCAGGAATGGTCCAGTAGGCAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WEWSGWQLWPSP*RLQEWSSRQPA Trigger: GGCTGGCTGCCTACTGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234247.2 |
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| CDS CAA 90 bp | TTGAGTTCCTGGGAATGGTCAGGCTGGCAGCTGTGGCCTTCTCCTTaGAGACTTCAGGAATGGTCCAGTAGGCAGCCAGCCAGCCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSWEWSGWQLWPSP*RLQEWSSRQPASLA Trigger: TGCTAGGCTGGCTGGCTGCCTACTGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCAGGAACTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234247.2 |
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| CDS CCA 72 bp | TGGCAGCTGTGGCCTTCTCCTTTGAGACTTCAGGAATaGTCCAGTAGGCAGCTACCAGCCAGCCTAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: WQLWPSPLRLQE*SSRQLPASLAP Trigger: AGGTGCTAGGCTGGCTGGTAGCTGCCTACTGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025161.10 |
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| CDS CAA 72 bp | TGGGAATGGTCAGGCTGGCAGCTGTGGCCTTCTCCTTaGAGACTTCAGGAATGGTCCAGTAGGCAGCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: WEWSGWQLWPSP*RLQEWSSRQLP Trigger: TGGTAGCTGCCTACTGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025161.10 |
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| CDS CCA 72 bp | TCTTTGAGTTCCTGGGAATGGTCAGGCTGGCAGCTGTaGCCTTCTCCTTTGAGACTTCAGGAATGGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSSWEWSGWQL*PSPLRLQEWSS Trigger: ACTGGACCATTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCAGGAACTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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| CDS CCA 72 bp | ACTGTGACTTCTTTGAGTTCCTGGGAATGGTCAGGCTaGCAGCTGTGGCCTTCTCCTTTGAGACTTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVTSLSSWEWSG*QLWPSPLRLQE Trigger: TTCCTGAAGTCTCAAAGGAGAAGGCCACAGCTGCCAGCCTGACCATTCCCAGGAACTCAAAGAAGTCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025161.10 ENSMUST00000234247.2 |
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