Pregenerated sensors for TAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024339Ensembl transcript IDs: ENSMUST00000025197.6, ENSMUST00000131105.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCTCCTGGCCACAGTCCTaGGAGGGGCTCAGGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TTHSPNPHPSRPQKHTKSSWPQS*EGLRVW Trigger: CCAGACCCTGAGCCCCTCTCAGGACTGTGGCCAGGA...GGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAGGGGCTCAGCAGGGCGGCCACGGTaGTCTTCCCTGATCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LRHGPCGSDPGHSPERGSAGRPR*SSLIHW Trigger: CCAATGGATCAGGGAAGAGCACCGTGGCCGCCCTGC...TGAGCCCCTCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAGGGGCTCACTCCAAGTCGCAGGGTaGCCTCTATCCAGAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRHGPCGSDPGHSPERGSLQVAG*PLSRVL Trigger: CAGGACTCTGGATAGAGGGCACCCTGCGACTTGGAG...TGAGCCCCTCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAGGGGCTCAAGTCCTGGCAGCCCCTaGGGAAGCAGATTTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRHGPCGSDPGHSPERGSSPGSP*GSRFPR Trigger: TCTGGGAAATCTGCTTCCCCAGGGGCTGCCAGGACT...TGAGCCCCTCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAAAGGCAGGTCCGGCCTaGACAGCTTCAGCAACCGCT | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRKAGPA*TASATA Trigger: AGCGGTTGCTGAAGCTGTCCAGGCCGGACCTGCCTT...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGACAAGGGCCCGGGCAATaGCCAGACGTTGCTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRQGPGQ*PDVASV Trigger: GACAGAAGCAACGTCTGGCCATTGCCCGGGCCCTTG...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGGCCTCGCGCACCACCTaGCCCGCCTTGGCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: QTTHSPNPHPSRPQKHTKASRTT*PALATA Trigger: TGCAGTGGCCAAGGCGGGGCAGGTGGTGCGCGAGGC...CTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGATCCACCAGACGTCCCTaGTTGAGCACCAGAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRSTRRP*LSTRTW Trigger: CCAAGTTCTGGTGCTCAAGCAGGGACGTCTGGTGGA...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGATGTCCCACTTCCTCCTaGTACAGCAGGAAGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRCPTSS*YSRKES Trigger: GCTCTCCTTCCTGCTGTACCAGGAGGAAGTGGGACA...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACAGCAGGCCACCCCGGGTaGCCTCTCCAGCCAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTAGHPG*PLQPES Trigger: AGATTCTGGCTGGAGAGGTCACCCGGGGTGGCCTGC...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACAGCAGGGAGAGGAAGGTaGGTCGGGGCGATACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTAGRGR*VGAIPG Trigger: TCCAGGTATCGCCCCGACTCACCTTCCTCTCCCTGC...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | CACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAACCTCCTTGTAGTGGCTaGCTTCCTGCTCCTCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HKPPTPPTLTHQGHKNTQPPCSG*LPAPRP Trigger: GGGCCGAGGAGCAGGAAGTCAGCCACTACAAGGAGG...TTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAAGGCAATATTGTCCTTaGCAGAACCCGAGAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRRQYCP*QNPRTA Trigger: TGCTGTTCTCGGGTTCTGTCAAGGACAATATTGCCT...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGATTGGCGCAACAAAGATaGGAAAAGCTGCTCTCGTAT | + |
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Preference number: 4 (lower is better) Translates to: LASSGTVPVGLILATVLRLAQQR*EKLLSY Trigger: ATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAA...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGGTGAACGTCAGACCCTaGAGCACAGGCTTCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTTHSPNPHPSRPQKHTKVNVRP*STGFSG Trigger: CCCCGAGAAGCCTGTGCTCCAGGGTCTGACGTTCAC...CTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | ACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAACTCTATCCAGAGTCCTaGCAGCCCCTGGGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THSPNPHPSRPQKHTKSKLYPES*QPLGKQ Trigger: CTGCTTCCCCAGGGGCTGCCAGGACTCTGGATAGAG...TTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | ACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAATGGCCGTCCCTGAGCTaGTCATGCTCCACCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: THSPNPHPSRPQKHTKSKWPSLS*SCSTRR Trigger: ACGTCTGGTGGAGCATGACCAGCTCAGGGACGGCCA...TTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACAACTTGGTCAGCATTCTaGACCGTGTGCAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTTWSAF*TVCSLW Trigger: CCACAGGCTGCACACGGTTCAGAATGCTGACCAAGT...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACAGTACACCTTCTCAGCTaGTATCGTGAGGGGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTVHLLS*YREGQV Trigger: GACCTGCCCCTCACGATAGCAGCTGAGAAGGTGTAC...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACATCTCCAGCCAGAATCTaGTGCACGCCGCAGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTSPARI*CTPQFR Trigger: TCTGAACTGCGGCGTGCAGCAGATTCTGGCTGGAGA...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGATCGTCCTGTCCCCCTaGGATCTCCAGTTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTTHSPNPHPSRPQKHTKIVLSP*DLQFCR Trigger: CCTACAGAACTGGAGATCGCAGGGGGACAGGACGAT...CTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTACCTGGTTCCTTCTCCTaGACTCCAGCCGGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LTHQGHKNTQSPKRSQSLPGSFS*TPAGLS Trigger: GCTGAGCCCGGCTGGAGTCCAGGAGAAGGAACCAGG...TAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTAGCCAGGATCCCAGGCTaGGGCAGATTCGGCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTHQGHKNTQSPKRSQSLARIPG*GRFGFR Trigger: CCGAAAGCCGAATCTGCCCCAGCCTGGGATCCTGGC...TAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTAAACAGCACAGGCTCCTaGCCCACCAGAACCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTHQGHKNTQSPKRSQSLNSTGS*PTRTTW Trigger: CCAGGTGGTTCTGGTGGGGCAGGAGCCTGTGCTGTT...TAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | AACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTGGCCACTGCATCCTaGATCTCCTTTAGCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: NPHPSRPQKHTKSKTVPILATAS*ISFSTA Trigger: GGCGGTGCTAAAGGAGATCCAGGATGCAGTGGCCAA...GATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | ACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAACAGAGAACAGGCACATaGAAAAGATGGCGCTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TNHPLPQPSPIKATKTHKQRTGT*KRWRLQ Trigger: TTGCAAGCGCCATCTTTTTCATGTGCCTGTTCTCTG...TTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | CTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTACAGCAGCGCCCACGTTaGTCAGCATATCCCCGTACA | + |
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Preference number: 4 (lower is better) Translates to: LTHQGHKNTQSPKRSQSLQQRPR*SAYPRT Trigger: TGTACGGGGATATGCTGAGCAACGTGGGCGCTGCTG...TAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR GCA 90 bp | AACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCGCAATGGCCAGACGTTaGTTCTGTCCCACAGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: NPHPSRPQKHTKSKTVPIAMARR*FCPTAN Trigger: GTTAGCTGTGGGACAGAAGCAACGTCTGGCCATTGC...GATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR TCA 90 bp | ACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTATCCGCGATACCTGGAGCATaGAGAAGTAGAGCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: THQGHKNTQSPKRSQSLSAIPGA*RSRAPP Trigger: TGGTGGGGCTCTACTTCTTCATGCTCCAGGTATCGC...GGATAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | CTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTAGAAAAGGAGACGTCTTaGAATTCCACGCGCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTHQGHKNTQSPKRSQSLEKETS*NSTRPS Trigger: GGAGGGGCGCGTGGAATTCCAAGACGTCTCCTTTTC...TAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CCA 90 bp | ACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTATCCCCTGTCTTGGTCTCCTaGAAGAATCCAAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: THQGHKNTQSPKRSQSLSPVLVS*KNPRSW Trigger: CCAAGACCTTGGATTCTTCCAGGAGACCAAGACAGG...GGATAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 90 bp | CAGTCTGCAGCCCTCCTACCGCCTCGCGCACCACCTGCCCCGCCTTaGCCACTGCATCCTGGATCTCCTTTAGCACCGCCTGATGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: QSAALLPPRAPPAPP*PLHPGSPLAPPDGG Trigger: CCCGCCATCAGGCGGTGCTAAAGGAGATCCAGGATGCAGTGGCCAAGGCGGGGCAGGTGGTGCGCGAGGCGGTAGGAGGGCTGCAGACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | CTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAGGGGCTCACGAAAAGGAGACGTCTaGGAATTCCACGCGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LRHGPCGSDPGHSPERGSRKGDV*EFHAPL Trigger: GAGGGGCGCGTGGAATTCCAAGACGTCTCCTTTTCG...TGAGCCCCTCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 90 bp | GCCACCACAGCTGTCTACATCGCTCCAGGGCCTCCTTGTAGTGGCTaGCTTCCTGCTCCTCGGCCCCAAAGCTTCGCACAGTCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ATTAVYIAPGPPCSG*LPAPRPQSFAQSAA Trigger: GGCTGCAGACTGTGCGAAGCTTTGGGGCCGAGGAGCAGGAAGTCAGCCACTACAAGGAGGCCCTGGAGCGATGTAGACAGCTGTGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 90 bp | CCACTTCCTCCTGGTACAGCAGGAAGGAGAGCAGGCCACCCCGGGTaGCCTCTCCAGCCAGAATCTGCTGCACGCCGCAGTTCAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: PLPPGTAGRRAGHPG*PLQPESAARRSSES Trigger: TGATTCTGAACTGCGGCGTGCAGCAGATTCTGGCTGGAGAGGTCACCCGGGGTGGCCTGCTCTCCTTCCTGCTGTACCAGGAGGAAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | CTAGCCTCCTCCGGCACGGTCCCTGTGGGTCTGATCCTGGCCACAGTCCTGAGAAGCAGGATATTGGCATaGAAAGGGAGCCAGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LASSGTVPVGLILATVLRSRILA*KGSQRL Trigger: GAGCCGCTGGCTCCCTTTCAATGCCAATATCCTGCT...TCTCAGGACTGTGGCCAGGATCAGACCCACAGGGACCGTGCCGGAGGAGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 90 bp | AGAGCCCCACCACCTTCACCAGGCTCCGCAGCAGGATATTGGCATTaGAAGGGAGCCAGCGGCTCATCAGAGAGGTGTCAGAGCTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RAPPPSPGSAAGYWH*KGASGSSERCQSSA Trigger: GGCTGAGCTCTGACACCTCTCTGATGAGCCGCTGGCTCCCTTTCAATGCCAATATCCTGCTGCGGAGCCTGGTGAAGGTGGTGGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | AACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCGGCAGCTGCCATCACTaGAGCGTCCTCACAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: NHPLPQPSPIKATKTHKVGSCHH*SVLTVP Trigger: AGGGACTGTGAGGACGCTCAAGTGATGGCAGCTGCC...GACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 90 bp | TCTCCAGCCAGAATCTGCTGCACGCCGCAGTTCAGAATCAGCACCTaGATGCCCAAGGCCATCACCCTCCGTATGACTAGATACACGTCT | + |
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Preference number: 5 (lower is better) Translates to: SPARICCTPQFRIST*MPKAITLRMTRYTS Trigger: AGACGTGTATCTAGTCATACGGAGGGTGATGGCCTTGGGCATGCAGGTGCTGATTCTGAACTGCGGCGTGCAGCAGATTCTGGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 90 bp | ACTCCAAGTCGCAGGGTGCCCTCTATCCAGAGTCCTGGCAGCCCCTaGGGAAGCAGATTTCCCAGAGATCCTTGTAGCAACCCAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: TPSRRVPSIQSPGSP*GSRFPRDPCSNPSK Trigger: TTTACTTGGGTTGCTACAAGGATCTCTGGGAAATCTGCTTCCCCAGGGGCTGCCAGGACTCTGGATAGAGGGCACCCTGCGACTTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025197.6 ENSMUST00000131105.2 |
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| CDS-3UTR CAA 90 bp | AACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCACCACCTGCCCCGCCTaGGCCACTGCATCCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: NPHPSRPQKHTKSKTVPITTCPA*ATASWI Trigger: GATCCAGGATGCAGTGGCCAAGGCGGGGCAGGTGGT...GATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | AACCACAAACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACATCTCGTATCCGCAGGTaGATCCTGGACATGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: NHKPPTPPTLTHQGHKNTSRIRR*ILDMVK Trigger: CTTCACCATGTCCAGGATCAACCTGCGGATACGAGA...TGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTTTGTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | AACCACCCACTCCCCCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCTTCAGCTCCCCTGTCTaGGTCTCCTGGAAGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: NHPLPQPSPIKATKTHKVFSSPV*VSWKNP Trigger: TGGATTCTTCCAGGAGACCAAGACAGGGGAGCTGAA...GACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGGGGGAGTGGGTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 90 bp | GAAGGAGCTCCCAACAGAGAACAGGCACATGAAAAAGATGGCGCTTaGAAAGGCGTCGGGGTCGAAATCACCTCCCAGGATGTCAATTAC | + |
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Preference number: 5 (lower is better) Translates to: EGAPNREQAHEKDGA*KGVGVEITSQDVNY Trigger: GTAATTGACATCCTGGGAGGTGATTTCGACCCCGACGCCTTTGCAAGCGCCATCTTTTTCATGTGCCTGTTCTCTGTTGGGAGCTCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 90 bp | GAGTTCAGCTCCCCTGTCTTGGTCTCCTGGAAGAATCCAAGGTCTTaGCGCAACAAAGATGAGAAAAGCTGCTCTCGTATCCGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EFSSPVLVSWKNPRS*RNKDEKSCSRIRRL Trigger: CAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAAGACCTTGGATTCTTCCAGGAGACCAAGACAGGGGAGCTGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 90 bp | GTTGATCCTGGACATGGTGAAGAGGAAGGAGCCTCCTCTACAGCCTaGAGAGAAGGAGCTCCCAACAGAGAACAGGCACATGAAAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: VDPGHGEEEGASSTA*REGAPNREQAHEKD Trigger: ATCTTTTTCATGTGCCTGTTCTCTGTTGGGAGCTCCTTCTCTGCAGGCTGTAGAGGAGGCTCCTTCCTCTTCACCATGTCCAGGATCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | CCAACCCTCACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAACAGGTTCCGGACATATaGTCCCACTTCCTCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: PTLTHQGHKNTQSPKRSQQVPDI*SHFLLV Trigger: TACCAGGAGGAAGTGGGACAATATGTCCGGAACCTG...TTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGTGAGGGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 90 bp | TGTCTTGGTCTCCTGGAAGAATCCAAGGTCTTGGCGCAACAAAGATaGGAAAAGCTGCTCTCGTATCCGCAGGTTGATCCTGGACATGGT | + |
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Preference number: 5 (lower is better) Translates to: CLGLLEESKVLAQQR*EKLLSYPQVDPGHG Trigger: ACCATGTCCAGGATCAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAAGACCTTGGATTCTTCCAGGAGACCAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS-3UTR CAA 90 bp | ACCCATCAAGGCCACAAAAACACACAAAGTCCAAAACGGTCCCAATCTTTATCCCTTGAGCACCAGAACTaGGTCAGCATTCTGAACCGT | + |
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Preference number: 5 (lower is better) Translates to: THQGHKNTQSPKRSQSLSLEHQN*VSILNR Trigger: ACGGTTCAGAATGCTGACCAAGTTCTGGTGCTCAAG...GGATAAAGATTGGGACCGTTTTGGACTTTGTGTGTTTTTGTGGCCTTGATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | ACTTCCTGCTCCTCGGCCCCAAAGCTTCGCACAGTCTaGAGCCCTCCTACCGCCTCGCGCACCACCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSCSSAPKLRTV*SPPTASRTTCP Trigger: GGGGCAGGTGGTGCGCGAGGCGGTAGGAGGGCTGCAGACTGTGCGAAGCTTTGGGGCCGAGGAGCAGGAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 72 bp | CCTGGTACAGCAGGAAGGAGAGCAGGCCACCCCGGGTaGCCTCTCCAGCCAGAATCTGCTGCACGCCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PGTAGRRAGHPG*PLQPESAARRS Trigger: ACTGCGGCGTGCAGCAGATTCTGGCTGGAGAGGTCACCCGGGGTGGCCTGCTCTCCTTCCTGCTGTACCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | ACAGTCTGCAGCCCTCCTACCGCCTCGCGCACCACCTaGCCCGCCTTGGCCACTGCATCCTGGATCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TVCSPPTASRTT*PALATASWISF Trigger: AAAGGAGATCCAGGATGCAGTGGCCAAGGCGGGGCAGGTGGTGCGCGAGGCGGTAGGAGGGCTGCAGACTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | AGCCCCAAGAGGCAGAAGCCACTCGGACTACTGAGGTaGTCGCGGTGCCTCCCACCAGAGCTCTTAGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SPKRQKPLGLLR*SRCLPPELLAR Trigger: TCTCGCTAAGAGCTCTGGTGGGAGGCACCGCGAGCACCTCAGTAGTCCGAGTGGCTTCTGCCTCTTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | CACCGCCTGATGGCGGGGGTTGTACACCTTCTCAGCTaGTATCGTGAGGGGCAGGTCCAGCAGGGAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HRLMAGVVHLLS*YREGQVQQGEE Trigger: TTCCTCTCCCTGCTGGACCTGCCCCTCACGATAGCAGCTGAGAAGGTGTACAACCCCCGCCATCAGGCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | AGCAGGCCACCCCGGGTGACCTCTCCAGCCAGAATCTaGTGCACGCCGCAGTTCAGAATCAGCACCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: SRPPRVTSPARI*CTPQFRISTCM Trigger: CATGCAGGTGCTGATTCTGAACTGCGGCGTGCAGCAGATTCTGGCTGGAGAGGTCACCCGGGGTGGCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 72 bp | CACTCCAAGTCGCAGGGTGCCCTCTATCCAGAGTCCTaGCAGCCCCTGGGGAAGCAGATTTCCCAGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: HSKSQGALYPES*QPLGKQISQRS Trigger: GGATCTCTGGGAAATCTGCTTCCCCAGGGGCTGCCAGGACTCTGGATAGAGGGCACCCTGCGACTTGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025197.6 ENSMUST00000131105.2 |
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| CDS GCA 72 bp | AGGCAGAAGCCACTCGGACTACTGAGGTGCTCGCGGTaGCTCCCACCAGAGCTCTTAGCGAGAAAAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: RQKPLGLLRCSR*LPPELLARKTG Trigger: CCCTGTTTTTCTCGCTAAGAGCTCTGGTGGGAGGCACCGCGAGCACCTCAGTAGTCCGAGTGGCTTCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | AGCCTGTGGGCAATCACCAGCATCGTCCTGTCCCCCTaGGATCTCCAGTTCTGTAGGGCCTGTTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLWAITSIVLSP*DLQFCRACSHW Trigger: CCAGTGTGAACAGGCCCTACAGAACTGGAGATCGCAGGGGGACAGGACGATGCTGGTGATTGCCCACAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 72 bp | ACGTCAGACCCTGGAGCACAGGCTTCTCGGGGCGCCTaGGATACGAAAAGGAGACGTCTTGGAATTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: TSDPGAQASRGA*DTKRRRLGIPR Trigger: GCGTGGAATTCCAAGACGTCTCCTTTTCGTATCCCAGGCGCCCCGAGAAGCCTGTGCTCCAGGGTCTGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 72 bp | AGCCCCACCACCTTCACCAGGCTCCGCAGCAGGATATaGGCATTGAAAGGGAGCCAGCGGCTCATCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPTTFTRLRSRI*ALKGSQRLIRE Trigger: CTCTCTGATGAGCCGCTGGCTCCCTTTCAATGCCAATATCCTGCTGCGGAGCCTGGTGAAGGTGGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 72 bp | CCACCTTCACCAGGCTCCGCAGCAGGATATTGGCATTaGAAGGGAGCCAGCGGCTCATCAGAGAGGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PPSPGSAAGYWH*KGASGSSERCQ Trigger: CTGACACCTCTCTGATGAGCCGCTGGCTCCCTTTCAATGCCAATATCCTGCTGCGGAGCCTGGTGAAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 72 bp | ATGCTCCACCAGACGTCCCTGCTTGAGCACCAGAACTaGGTCAGCATTCTGAACCGTGTGCAGCCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: MLHQTSLLEHQN*VSILNRVQPVG Trigger: GCCCACAGGCTGCACACGGTTCAGAATGCTGACCAAGTTCTGGTGCTCAAGCAGGGACGTCTGGTGGAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 72 bp | TCAGCACCTGCATGCCCAAGGCCATCACCCTCCGTATaGCTAGATACACGTCTTTTTCCAGGTCTCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SAPACPRPSPSV*LDTRLFPGLGA Trigger: GGCGCCGAGACCTGGAAAAAGACGTGTATCTAGTCATACGGAGGGTGATGGCCTTGGGCATGCAGGTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 72 bp | ACCACCTTCACCAGGCTCCGCAGCAGGATATTGGCATaGAAAGGGAGCCAGCGGCTCATCAGAGAGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: TTFTRLRSRILA*KGSQRLIREVS Trigger: TGACACCTCTCTGATGAGCCGCTGGCTCCCTTTCAATGCCAATATCCTGCTGCGGAGCCTGGTGAAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 72 bp | CTGCAGAGAAGGAGCTCCCAACAGAGAACAGGCACATaGAAAAGATGGCGCTTGCAAAGGCGTCGGGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: LQRRSSQQRTGT*KRWRLQRRRGR Trigger: TCGACCCCGACGCCTTTGCAAGCGCCATCTTTTTCATGTGCCTGTTCTCTGTTGGGAGCTCCTTCTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | GGACATGGTGAAGAGGAAGGAGCCTCCTCTACAGCCTaGAGAGAAGGAGCTCCCAACAGAGAACAGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: GHGEEEGASSTA*REGAPNREQAH Trigger: ATGTGCCTGTTCTCTGTTGGGAGCTCCTTCTCTGCAGGCTGTAGAGGAGGCTCCTTCCTCTTCACCATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | AGAATCTGCTGCACGCCGCAGTTCAGAATCAGCACCTaGATGCCCAAGGCCATCACCCTCCGTATGACTAGA | + |
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Preference number: 6 (lower is better) Translates to: RICCTPQFRIST*MPKAITLRMTR Trigger: TCTAGTCATACGGAGGGTGATGGCCTTGGGCATGCAGGTGCTGATTCTGAACTGCGGCGTGCAGCAGATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | CCCAACAGAGAACAGGCACATGAAAAAGATGGCGCTTaGAAAGGCGTCGGGGTCGAAATCACCTCCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: PNREQAHEKDGA*KGVGVEITSQD Trigger: ATCCTGGGAGGTGATTTCGACCCCGACGCCTTTGCAAGCGCCATCTTTTTCATGTGCCTGTTCTCTGTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CCA 72 bp | CTCAGCCTCGAGTTCAGCTCCCCTGTCTTGGTCTCCTaGAAGAATCCAAGGTCTTGGCGCAACAAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: LSLEFSSPVLVS*KNPRSWRNKDE Trigger: CTCATCTTTGTTGCGCCAAGACCTTGGATTCTTCCAGGAGACCAAGACAGGGGAGCTGAACTCGAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | GTTTATTCCATTAGTCATTTCCCCTATGAAGTCGTCTaGACAGGCCGCCTGGGCAGCTGCCATCACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VYSISHFPYEVV*TGRLGSCHHLS Trigger: GCTCAAGTGATGGCAGCTGCCCAGGCGGCCTGTGCAGACGACTTCATAGGGGAAATGACTAATGGAATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 90 bp | TCTTGGCGCAACAAAGATGAGAAAAGCTGCTCTCGTATCCGCAGGTaGATCCTGGACATGGTGAAGAGGAAGGAGCCTCCTCTACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SWRNKDEKSCSRIRR*ILDMVKRKEPPLQP Trigger: AGGCTGTAGAGGAGGCTCCTTCCTCTTCACCATGTCCAGGATCAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 72 bp | CATATCCCCGTACATGTAAACCAGGTTCCGGACATATaGTCCCACTTCCTCCTGGTACAGCAGGAAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: HIPVHVNQVPDI*SHFLLVQQEGE Trigger: CTCTCCTTCCTGCTGTACCAGGAGGAAGTGGGACAATATGTCCGGAACCTGGTTTACATGTACGGGGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS TCA 72 bp | CTCCTGGAAGAATCCAAGGTCTTGGCGCAACAAAGATaGGAAAAGCTGCTCTCGTATCCGCAGGTTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LLEESKVLAQQR*EKLLSYPQVDP Trigger: AGGATCAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAAGACCTTGGATTCTTCCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS GCA 72 bp | AATCCAAGGTCTTGGCGCAACAAAGATGAGAAAAGCTaGTCTCGTATCCGCAGGTTGATCCTGGACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: NPRSWRNKDEKS*SRIRRLILDMV Trigger: CACCATGTCCAGGATCAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTTGCGCCAAGACCTTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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| CDS CAA 72 bp | AACAAAGATGAGAAAAGCTGCTCTCGTATCCGCAGGTaGATCCTGGACATGGTGAAGAGGAAGGAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NKDEKSCSRIRR*ILDMVKRKEPP Trigger: AGGAGGCTCCTTCCTCTTCACCATGTCCAGGATCAACCTGCGGATACGAGAGCAGCTTTTCTCATCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025197.6 |
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