Pregenerated sensors for TAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037321Ensembl transcript IDs: ENSMUST00000041633.15, ENSMUST00000170086.8, ENSMUST00000171148.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTaGTACAAGCTCAGCACCGGGAGGGTGGAGACCGGAGATTTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: ILSQRHINQVCVCML*YKLSTGRVETGDLA Trigger: TGCTAAATCTCCGGTCTCCACCCTCCCGGTGCTGAGCTTGTATCACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 90 bp | AACACCCATAGAACACCCAAATGCCAGCCTATGCCTTTGGTTAATTaGAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: NTHRTPKCQPMPLVN*KLLVLSLCTLWAFL Trigger: AAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTATGGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 90 bp | ATAGAACACCCAAATGCCAGCCTATGCCTTTGGTTAATTGCAAGCTaGTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTC | + |
|
Preference number: 1 (lower is better) Translates to: IEHPNASLCLWLIAS*LSFLSVHFGRFFSF Trigger: GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR CCA 90 bp | CCTTTGGTTAATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTaGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: PLVNCKLLVLSLCTL*AFLLILSQRHINQV Trigger: AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 90 bp | ACACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATaGCAGCCTATGCCTTTGGTTAATTGCAAGCTGCTTGTCCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: TPVLLQISNTHRTPK*QPMPLVNCKLLVLS Trigger: AGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR CAA 90 bp | GAACACCCAAATGCCAGCCTATGCCTTTGGTTAATTGCAAGCTGCTaGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: EHPNASLCLWLIASC*SFLSVHFGRFFSFY Trigger: ATAGAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR TCA 72 bp | CAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTaGTACAAGCTCAGCACCGGGAGGGTGGAGACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRHINQVCVCML*YKLSTGRVETG Trigger: TCCGGTCTCCACCCTCCCGGTGCTGAGCTTGTATCACAGCATGCACACACAAACCTGGTTTATGTGGCGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTGGTGTGGTAATATCTTaGCTCCCAGGTTCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGYLLEFTFSHVTSTSAPGVVIS*LPGSLS Trigger: TGACAGAGAACCTGGGAGCAAAGATATTACCACACC...AGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 72 bp | AGAACACCCAAATGCCAGCCTATGCCTTTGGTTAATTaGAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RTPKCQPMPLVN*KLLVLSLCTLW Trigger: CCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR CCA 72 bp | ACACCCATAGAACACCCAAATGCCAGCCTATGCCTTTaGTTAATTGCAAGCTGCTTGTCCTTTCTCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TPIEHPNASLCL*LIASCLSFLSV Trigger: TACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTATGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGGAAACACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCGGTGTGGTAATATCTTaGCTCCCAGGTTCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGKHIRGKFRVSPRVYIFGVVIS*LPGSLS Trigger: TGACAGAGAACCTGGGAGCAAAGATATTACCACACC...GAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTGTTTCCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 72 bp | TATCAAACACCCATAGAACACCCAAATGCCAGCCTATaGCTTTGGTTAATTGCAAGCTGCTTGTCCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YQTPIEHPNASL*LWLIASCLSFL Trigger: GAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR GCA 72 bp | TTATTACAAATATCAAACACCCATAGAACACCCAAATaGCAGCCTATGCCTTTGGTTAATTGCAAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLQISNTHRTPK*QPMPLVNCKLL Trigger: AAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGCATGGGCTCCTGCGGTaGCCCCGAGGACCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLSHRVEDRRGTARSVQHGLLR*PRGPRG Trigger: TCCGCGGGGTCCTCGGGGTCACCGCAGGAGCCCATG...CTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGAGGCTCCCCAACTTGTaGCACAGGGCGGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APRFSVTQSRGQEGDSTQRLPNL*HRAAAG Trigger: GCCCGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCT...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGGTGCCACAGGGCGGCTaGGGGCAATGCTGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: APRFSVTQSRGQEGDSTQVPQGG*GQCCHI Trigger: TATGTGGCAGCATTGCCCGCAGCCGCCCTGTGGCAC...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGTCCAGAGGCCTTAGGATGTGGTGGGCCTaGTCTGCCAGGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRVEDRRGTARSVQSRGLRMWWA*SARLSC Trigger: GCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCT...AAGGCCTCTGGACTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTTCCAGGATGCAGGGTaGACGTCAGCCCCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APRFSVTQSRGQEGDSTQFQDAG*TSAPEA Trigger: TGCTTCAGGGGCTGACGTTCACCCTGCATCCTGGAA...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGTCCAGAGGCCTTCCAGAGATGAAATCGTaGGCTCCAGACTCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRVEDRRGTARSVQSRGLPEMKS*APDSTA Trigger: GGCCGTGGAGTCTGGAGCCCACGATTTCATCTCTGG...AAGGCCTCTGGACTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGTCCGAGAAGCCCGCTTaGGGCTCTCATACAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSHRVEDRRGTARSVQSEKPA*GSHTGA Trigger: GGCTCCTGTATGAGAGCCCCAAGCGGGCTTCTCGGA...CTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGCGACAGAGCCTTCTCTaGGAAAGAGGATGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APRFSVTQSRGQEGDSTQRQSLL*ERGCGG Trigger: CCCACCACATCCTCTTTCTCAGAGAAGGCTCTGTCG...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGCACCTTCACTGCCAGTaGCTGATGCACTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APRFSVTQSRGQEGDSTQHLHCQ*LMHFSQ Trigger: CTGGGAAAAGTGCATCAGTCACTGGCAGTGAAGGTG...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGTCCAGAGGCCTTCTGGTAGAGAACGAATaGGACAAGGTTGCCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRVEDRRGTARSVQSRGLLVENE*DKVAAA Trigger: AGCAGCGGCAACCTTGTCTCATTCGTTCTCTACCAG...AAGGCCTCTGGACTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCCATGGGCTCCTGCGGTaGCCCCGAGGACCCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFHGLLR*PRGPRG Trigger: TCCGCGGGGTCCTCGGGGTCACCGCAGGAGCCCATG...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCCCAGCCATGGGCTCCTaGGGTGACCCCGAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSPAMGS*GDPEDP Trigger: GGGGTCCTCGGGGTCACCGCAGGAGCCCATGGCTGG...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTCTCCGTGGCGGCCACCAGCGGCTaGAAAGCAGCCAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVYIFSCNKHLRSSTVSVAATSG*KAASQP Trigger: TGGCTGGCTGGCTGCTTTGCAGCCGCTGGTGGCCGC...CACGGAGACAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCGCAGCCAGCCAGCCATaGGCTCCTGCGGTGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFAASQP*APAVTP Trigger: CGGGGTCACCGCAGGAGCCCATGGCTGGCTGGCTGC...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CATAAACCAGGTTTGTGTGTGCATGCTGTGATACAAGCTCAGCACCGGGAGGGTTTCATGAGCTGCAGGTaGGTGCCCTGCTCGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: HKPGLCVHAVIQAQHREGFMSCR*VPCSPT Trigger: TGTCGGCGAGCAGGGCACCCACCTGCAGCTCATGAA...ACCCTCCCGGTGCTGAGCTTGTATCACAGCATGCACACACAAACCTGGTTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTCCAGCCATGGGCTCCTaGGGTGACCCCGAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVPAMGS*GDPEDP Trigger: GGGGTCCTCGGGGTCACCGCAGGAGCCCATGGCTGG...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTGGCGGCCACCAGCGGCTaGAAAGCAGCCAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSITTPHKPGLCVHAVAATSG*KAASQP Trigger: TGGCTGGCTGGCTGCTTTGCAGCCGCTGGTGGCCGC...CACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTGCAGCCAGCCAGCCATaGGCTCCTGCGGTGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVAASQP*APAVTP Trigger: CGGGGTCACCGCAGGAGCCCATGGCTGGCTGGCTGC...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CATAAACCAGGTTTGTGTGTGCATGCTGTGATACAAGCTCAGCACCGGGAGGGTCCAGAGATGAAATCGTaGGCTCCAGACTCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKPGLCVHAVIQAQHREGPEMKS*APDSTA Trigger: GGCCGTGGAGTCTGGAGCCCACGATTTCATCTCTGG...ACCCTCCCGGTGCTGAGCTTGTATCACAGCATGCACACACAAACCTGGTTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCGCCACTGCCTGTCGCTaGCCTCCTGACAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSATACR*PPDSWF Trigger: GAACCAGCTGTCAGGAGGTCAGCGACAGGCAGTGGC...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGAGGCTCCCCAACTTGTaGCACAGGGCGGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLEFTFSHVTSTSAPQLRLPNL*HRAAAG Trigger: GCCCGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCT...CAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR CAA 72 bp | CGCTCCTCAACTGTCTCCGTGGGTGTGGTAATATCTTaGCTCCCAGGTTCTCTGTCACACAGAGTAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTVSVGVVIS*LPGSLSHRVED Trigger: GTCCTCTACTCTGTGTGACAGAGAACCTGGGAGCAAAGATATTACCACACCCACGGAGACAGTTGAGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTGTGAACGTCAGCCCCTaGAGCACCTGGACTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGYLLEFTFSHVTSTSAPVNVSP*STWTLG Trigger: GCCCAAAGTCCAGGTGCTTCAGGGGCTGACGTTCAC...AGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCCTCTCTTCATGAGCTaGAGGTGGGTGCCCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGYLLEFTFSHVTSTSAPPLFMS*RWVPCS Trigger: CGAGCAGGGCACCCACCTGCAGCTCATGAAGAGAGG...AGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTTCCAGGATGCAGGGTaGACGTCAGCCCCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSFQDAG*TSAPEA Trigger: TGCTTCAGGGGCTGACGTTCACCCTGCATCCTGGAA...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTCTCCGTGCCACGGCCACAGCTGTaGTTTCCTCCATGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVYIFSCNKHLRSSTVSVPRPQL*FPPWLE Trigger: CTCCAACCATGGAGGAAATCACAGCTGTGGCCGTGG...CACGGAGACAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTGCTGTCGCTGACCTCCTaGCAGCTGGTTCCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSITTPHKPGLCVHAVLSLTS*QLVPSL Trigger: GAGACTGGGAACCAGCTGTCAGGAGGTCAGCGACAG...CACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCCTGTCGCTGACCTCCTaGCAGCTGGTTCCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFLSLTS*QLVPSL Trigger: GAGACTGGGAACCAGCTGTCAGGAGGTCAGCGACAG...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTAGGATGTGGTGGGCCTaGTCTGCCAGGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVRMWWA*SARLSC Trigger: GCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCT...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCCCTCTCTTCATGAGCTaGAGGTGGGTGCCCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFPLFMS*RWVPCS Trigger: CGAGCAGGGCACCCACCTGCAGCTCATGAAGAGAGG...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTGTCCGAGAAGCCCGCTTaGGGCTCTCATACAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSITTPHKPGLCVHAVSEKPA*GSHTGA Trigger: GGCTCCTGTATGAGAGCCCCAAGCGGGCTTCTCGGA...CACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCTGAGAAAGAGGATGTaGTGGGCCTGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGYLLEFTFSHVTSTSAPLRKRM*WACSAR Trigger: CCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAG...AGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTCTCCGTGGGTGTCTGCCAGGCTGAGCTaGTGGGTGATAAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FTFSHVTSTSAPQLSPWVSARLS*WVIRRT Trigger: GGTTCTTCTTATCACCCAGCAGCTCAGCCTGGCAGA...CACCCACGGAGACAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | GGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAAAGAAAGAGGATGTGGTaGGCCTGCTCTGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEFTFSHVTSTSAPQRKRMW*ACSARL Trigger: CAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCT...TTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCGTGACCCCCAAAACATaGACACCAAGAGACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSVTPKT*TPRDTG Trigger: CCCTGTGTCTCTTGGTGTTCATGTTTTGGGGGTCAC...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGCCACGGCCACAGCTGTaGTTTCCTCCATGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLEFTFSHVTSTSAPQLPRPQL*FPPWLE Trigger: CTCCAACCATGGAGGAAATCACAGCTGTGGCCGTGG...CAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGCCTAGCCACTGCCTGTCGCTaGCCTCCTGACAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFYYKYQTPIEHPNASLATACR*PPDSWF Trigger: GAACCAGCTGTCAGGAGGTCAGCGACAGGCAGTGGC...TAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGTTAATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCCGACAGAGCCTTCTCTaGGAAAGAGGATGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLIASCLSFLSVHFGRFRQSLL*ERGCGG Trigger: CCCACCACATCCTCTTTCTCAGAGAAGGCTCTGTCG...GAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGGACTCGCACACGTTaGCTGTGTCCTCAGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVWTRTR*LCPQSP Trigger: GGGTGACTGAGGACACAGCCAACGTGTGCGAGTCCA...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCTTCTGCCTGAACTTCTaGGCCTCACCCTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFFCLNF*ASPSSL Trigger: CAACGAGGAGGGTGAGGCCCAGAAGTTCAGGCAGAA...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGGAAACACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCCTGAGAAAGAGGATGTaGTGGGCCTGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKHIRGKFRVSPRVYIFLRKRM*WACSAR Trigger: CCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAG...GAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTGTTTCCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCCAGAGTGAGGTACGGTaGCCCCCAAAACATGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFQSEVR*PPKHEH Trigger: GTGTTCATGTTTTGGGGGTCACCGTACCTCACTCTG...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGCCTAACCCTCCTCTCTTCATaGGCTGCAGGTGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQFYYKYQTPIEHPNASLTLLSS*AAGGCP Trigger: AGGGCACCCACCTGCAGCTCATGAAGAGAGGAGGGT...TAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | GGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAATCTGCCAGGCTGAGCTaGTGGGTGATAAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEFTFSHVTSTSAPQSARLS*WVIRRT Trigger: GGTTCTTCTTATCACCCAGCAGCTCAGCCTGGCAGA...TTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACTTCATGAGCTGCAGGTaGGTGCCCTGCTCGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNFMSCR*VPCSPT Trigger: TGTCGGCGAGCAGGGCACCCACCTGCAGCTCATGAA...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTGTGACCCCCAAAACATaGACACCAAGAGACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVVTPKT*TPRDTG Trigger: CCCTGTGTCTCTTGGTGTTCATGTTTTGGGGGTCAC...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | GGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAAGATAGCGAAGGCATCTaGACGACTGTTCCAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEFTFSHVTSTSAPQDSEGI*TTVPVQ Trigger: CTGTACTGGAACAGTCGTCCAGATGCCTTCGCTATC...TTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTGGATTTCCTCCATGGTTaGAGTCCGGTTCAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSITTPHKPGLCVHAVDFLHG*SPVQAI Trigger: TATGGCCTGAACCGGACTCCAACCATGGAGGAAATC...CACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCGATTTCCTCCATGGTTaGAGTCCGGTTCAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: IASCLSFLSVHFGRFFSFDFLHG*SPVQAI Trigger: TATGGCCTGAACCGGACTCCAACCATGGAGGAAATC...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAGAAAGAGGATGTGGTaGGCCTGCTCTGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNRKRMW*ACSARL Trigger: CAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCT...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACCTTCCAACTTCTGCCTaGACTTCTGGGCCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNLPTSA*TSGPHP Trigger: AGGGTGAGGCCCAGAAGTTCAGGCAGAAGTTGGAAG...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACCCTGAACAGCCTGGGTaGACTGAAGCTTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNPEQPG*TEASAA Trigger: TGCTGCTGAAGCTTCAGTTCACCCAGGCTGTTCAGG...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041633.15 |
||
| CDS-3UTR TCA 90 bp | AAAACACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGGTGAACGTCAGCCCCTaGAGCACCTGGACTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTPVLLQISNTHRTPKCQVNVSP*STWTLG Trigger: GCCCAAAGTCCAGGTGCTTCAGGGGCTGACGTTCAC...CTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | AAAACACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGACCCTCCTCTCTTCATaGGCTGCAGGTGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPVLLQISNTHRTPKCQTLLSS*AAGGCP Trigger: AGGGCACCCACCTGCAGCTCATGAAGAGAGGAGGGT...CTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTCTCCGTGGGTGAGATGTGATGGAACCTaGTGGGTTCTTCAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFSHVTSTSAPQLSPWVRCDGT*WVLQEK Trigger: TTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCT...CACCCACGGAGACAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTCTCCGTGATTTCTTCCAACTTCTaGCTGAACTTCTGGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVYIFSCNKHLRSSTVSVISSNF*LNFWAS Trigger: TGAGGCCCAGAAGTTCAGGCAGAAGTTGGAAGAAAT...CACGGAGACAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTGATAGCGAAGGCATCTaGACGACTGTTCCAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVDSEGI*TTVPVQ Trigger: CTGTACTGGAACAGTCGTCCAGATGCCTTCGCTATC...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACTTCTGCCTGAACTTCTaGGCCTCACCCTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNFCLNF*ASPSSL Trigger: CAACGAGGAGGGTGAGGCCCAGAAGTTCAGGCAGAA...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCGCAAAAGAGACATCTTaGAACTCCACAAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSAKETS*NSTRPF Trigger: GAAAGGCCTTGTGGAGTTCCAAGATGTCTCTTTTGC...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| 3UTR CAA 72 bp | AATGCCAGCCTATGCCTTTGGTTAATTGCAAGCTGCTaGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NASLCLWLIASC*SFLSVHFGRFF Trigger: GAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAATTAACCAAAGGCATAGGCTGGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACCACCTTCACTGCCAGTaGCTGATGCACTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNHLHCQ*LMHFSQ Trigger: CTGGGAAAAGTGCATCAGTCACTGGCAGTGAAGGTG...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | TATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGTTCGAATATTTTCTCTaGGGAGCCCACAGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLEFTFSHVTSTSAPQLFEYFL*GAHSLL Trigger: CAGAAGGCTGTGGGCTCCTCAGAGAAAATATTCGAA...CAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCAGATGTGATGGAACCTaGTGGGTTCTTCAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSRCDGT*WVLQEK Trigger: TTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCT...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR TCA 90 bp | AAAACACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGCTTCCAACTTCTGCCTaGACTTCTGGGCCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPVLLQISNTHRTPKCQLPTSA*TSGPHP Trigger: AGGGTGAGGCCCAGAAGTTCAGGCAGAAGTTGGAAG...CTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAAACACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCATTTCTTCCAACTTCTaGCTGAACTTCTGGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKHIRGKFRVSPRVYIFISSNF*LNFWAS Trigger: TGAGGCCCAGAAGTTCAGGCAGAAGTTGGAAGAAAT...GAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTGTTTCCCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACTTTGGGCGTTTCTTCTCATTCTATCACAACGCCACATAAACCAGGTTGCAAAAGAGACATCTTaGAACTCCACAAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTLWAFLLILSQRHINQVAKETS*NSTRPF Trigger: GAAAGGCCTTGTGGAGTTCCAAGATGTCTCTTTTGC...AACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGAAACGCCCAAAGTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | AGCCCAGCATCCGACACAGCATGTCTCCAGCGTCCCTGTTGCCGCTaGGCGCCCAGAGGCTCCCCAACTTGTGCCACAGGGCGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPASDTACLQRPCCR*APRGSPTCATGRLR Trigger: CCGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGCAACAGGGACGCTGGAGACATGCTGTGTCGGATGCTGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | CCAGGAAGCCCAGCATCCGACACAGCATGTCTCCAGCGTCCCTGTTaGCGCTGGGCGCCCAGAGGCTCCCCAACTTGTGCCACAGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSPASDTACLQRPC*RWAPRGSPTCATGR Trigger: CCGCCCTGTGGCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGCAACAGGGACGCTGGAGACATGCTGTGTCGGATGCTGGGCTTCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | GGCCAGCTCTCGGAACAAGGCAAGTCCAGGCAGGGCCAAACTCAGTaGGGCCACCAGCGGCTGCAAAGCAGCCAGCCAGCCATGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQLSEQGKSRQGQTQ*GHQRLQSSQPAMGS Trigger: GGAGCCCATGGCTGGCTGGCTGCTTTGCAGCCGCTGGTGGCCGCACTGAGTTTGGCCCTGCCTGGACTTGCCTTGTTCCGAGAGCTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | GCCGCTGGGCGCCCAGAGGCTCCCCAACTTGTGCCACAGGGCGGCTaGGGGCAATGCTGCCACATAACTGATAGCGAAGGCATCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AAGRPEAPQLVPQGG*GQCCHITDSEGIWT Trigger: CGTCCAGATGCCTTCGCTATCAGTTATGTGGCAGCATTGCCCGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCCAGGTTCTCTGTCACACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGCAGAGGCTCCCCAACTaGTGCCACAGGGCGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: APRFSVTQSRGQEGDSTQQRLPN*CHRAAA Trigger: CGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCTCTG...CTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTGTGACAGAGAACCTGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | AGAACCGTCCGAGAAGCCCGCTTGGGGCTCTCATACAGGAGCCGCTaGACCCGTAGCTGGTTGCCAGCATCCAGGGCACTGGTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RTVREARLGLSYRSR*TRSWLPASRALVAS Trigger: TGATGCCACCAGTGCCCTGGATGCTGGCAACCAGCTACGGGTCCAGCGGCTCCTGTATGAGAGCCCCAAGCGGGCTTCTCGGACGGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | GCCAGCATCCAGGGCACTGGTGGCATCATCCAAGATAAGCAGGAGTaGCTTCCGGATCAAGGCTCGGGCCAAGGCCACTGCCTGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASIQGTGGIIQDKQE*LPDQGSGQGHCLSL Trigger: CAGCGACAGGCAGTGGCCTTGGCCCGAGCCTTGATCCGGAAGCCACTCCTGCTTATCTTGGATGATGCCACCAGTGCCCTGGATGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | TCTCTGAGAAAGAGGATGTGGTGGGCCTGCTCTGCCAGGCTGAGCTaGTGGGTGATAAGAAGAACCGTCCGAGAAGCCCGCTTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRKRMWWACSARLS*WVIRRTVREARLGL Trigger: GAGCCCCAAGCGGGCTTCTCGGACGGTTCTTCTTATCACCCAGCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | CTGAGAAAGAGGATGTGGTGGGCCTGCTCTGCCAGGCTGAGCTGCTaGGTGATAAGAAGAACCGTCCGAGAAGCCCGCTTGGGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRKRMWWACSARLSC*VIRRTVREARLGLS Trigger: TGAGAGCCCCAAGCGGGCTTCTCGGACGGTTCTTCTTATCACCCAGCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | TGGGTGCCCTGCTCGCCGACAGAGCCTTCTCTGAGAAAGAGGATGTaGTGGGCCTGCTCTGCCAGGCTGAGCTGCTGGGTGATAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVPCSPTEPSLRKRM*WACSARLSCWVIRR Trigger: TCTTCTTATCACCCAGCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAGAGAAGGCTCTGTCGGCGAGCAGGGCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | CCAGAGGCTCCCCAACTTGTGCCACAGGGCGGCTGCGGGCAATGCTaGCACATAACTGATAGCGAAGGCATCTGGACGACTGTTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PEAPQLVPQGGCGQC*HITDSEGIWTTVPV Trigger: TACTGGAACAGTCGTCCAGATGCCTTCGCTATCAGTTATGTGGCAGCATTGCCCGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | TGCTCGCCGACAGAGCCTTCTCTGAGAAAGAGGATGTGGTGGGCCTaGTCTGCCAGGCTGAGCTGCTGGGTGATAAGAAGAACCGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CSPTEPSLRKRMWWA*SARLSCWVIRRTVR Trigger: TCGGACGGTTCTTCTTATCACCCAGCAGCTCAGCCTGGCAGAGCAGGCCCACCACATCCTCTTTCTCAGAGAAGGCTCTGTCGGCGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | AATGAGACAAGGTTGCCGCTGCTGACAGCCCCTCTGATCACCAGCTaGCCGCCCAGGTACAGAATTCCCACCTTCAGCAGCATTCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NETRLPLLTAPLITS*PPRYRIPTFSSIPE Trigger: CTCGGGAATGCTGCTGAAGGTGGGAATTCTGTACCTGGGCGGGCAGCTGGTGATCAGAGGGGCTGTCAGCAGCGGCAACCTTGTCTCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 90 bp | GATGTGATGGAACCTGCTGGGTTCTTCAGGAAAAACCCTGTCTCCTaGCGAAGGACGGCCCGAAACACCTCTCTGTGCACACGGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVMEPAGFFRKNPVS*RRTARNTSLCTRPC Trigger: GCACGGCCGTGTGCACAGAGAGGTGTTTCGGGCCGTCCTTCGCCAGGAGACAGGGTTTTTCCTGAAGAACCCAGCAGGTTCCATCACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 90 bp | CACGTTGGCTGTGTCCTCAGTCACCCGAGATGTGATGGAACCTGCTaGGTTCTTCAGGAAAAACCCTGTCTCCTGGCGAAGGACGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HVGCVLSHPRCDGTC*VLQEKPCLLAKDGP Trigger: CGGGCCGTCCTTCGCCAGGAGACAGGGTTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCTCGGGTGACTGAGGACACAGCCAACGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 90 bp | GCACACGTTGGCTGTGTCCTCAGTCACCCGAGATGTGATGGAACCTaGTGGGTTCTTCAGGAAAAACCCTGTCTCCTGGCGAAGGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHVGCVLSHPRCDGT*WVLQEKPCLLAKDG Trigger: GCCGTCCTTCGCCAGGAGACAGGGTTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCTCGGGTGACTGAGGACACAGCCAACGTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | CAGGACCTGAACAGCCTGGGTGAACTGAAGCTGGTAGAGAACGAATaGGACAAGGTTGCCGCTGCTGACAGCCCCTCTGATCACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDLNSLGELKLVENE*DKVAAADSPSDHQL Trigger: CAGCTGGTGATCAGAGGGGCTGTCAGCAGCGGCAACCTTGTCTCATTCGTTCTCTACCAGCTTCAGTTCACCCAGGCTGTTCAGGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | TCTGCATGGAGGGGTAGAGGGAGAGCAGGACCTGAACAGCCTGGGTaGACTGAAGCTGGTAGAGAACGAATGAGACAAGGTTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAWRGRGRAGPEQPG*TEAGRERMRQGCRC Trigger: GCAGCGGCAACCTTGTCTCATTCGTTCTCTACCAGCTTCAGTTCACCCAGGCTGTTCAGGTCCTGCTCTCCCTCTACCCCTCCATGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | AGCCTTCTGAACAGCCTGGGTGAACTGAAGCTGGTAGAGAACGAATaGGACAAGGTTGCCGCTGCTGACAGCCCCTCTGATCACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLNSLGELKLVENE*DKVAAADSPSDHQL Trigger: CAGCTGGTGATCAGAGGGGCTGTCAGCAGCGGCAACCTTGTCTCATTCGTTCTCTACCAGCTTCAGTTCACCCAGGCTGTTCAGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171148.2 |
||
| CDS TCA 90 bp | GAGTGGAGAGCAAGGAGTCCGGTCCAAGTATTCGAATATTTTCTCTaGGGAGCCCACAGCCTTCTGCATGGAGGGGTAGAGGGAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EWRARSPVQVFEYFL*GAHSLLHGGVEGEQ Trigger: CTGCTCTCCCTCTACCCCTCCATGCAGAAGGCTGTGGGCTCCTCAGAGAAAATATTCGAATACTTGGACCGGACTCCTTGCTCTCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGTAGAGGACAGGAGGGGGACAGCACGCAGTGTGCAGTCCAGAGGCCTTGCCAAGGCCTCCTTCTaGTTTAGAGTCTTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRVEDRRGTARSVQSRGLAKASF*FRVFIS Trigger: AGAAATGAAGACTCTAAACAAGAAGGAGGCCTTGGC...AAGGCCTCTGGACTGCACACTGCGTGCTGTCCCCCTCCTGTCCTCTACTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | GTAGGCAAAAGAGACATCTTGGAACTCCACAAGGCCTTTCATGTTTaGGGGTGCCAACGAGCCACTGAGTGGAGAGCAAGGAGTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGKRDILELHKAFHV*GCQRATEWRARSPV Trigger: GACCGGACTCCTTGCTCTCCACTCAGTGGCTCGTTGGCACCCTCAAACATGAAAGGCCTTGTGGAGTTCCAAGATGTCTCTTTTGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 90 bp | CAGGGTGAACGTCAGCCCCTGAAGCACCTGGACTTTGGGCTGGTTTaGGTAGGCAAAAGAGACATCTTGGAACTCCACAAGGCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGERQPLKHLDFGLV*VGKRDILELHKAFH Trigger: ATGAAAGGCCTTGTGGAGTTCCAAGATGTCTCTTTTGCCTACCCAAACCAGCCCAAAGTCCAGGTGCTTCAGGGGCTGACGTTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 90 bp | GTGGGCTCCAGACTCCACGGCCACAGCTGTGATTTCCTCCATGGTTaGAGTCCGGTTCAGGCCATACGCAATATTTTCTCGAAAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGSRLHGHSCDFLHG*SPVQAIRNIFSKAS Trigger: AGAAGCTTTCGAGAAAATATTGCGTATGGCCTGAACCGGACTCCAACCATGGAGGAAATCACAGCTGTGGCCGTGGAGTCTGGAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGCAGAGGCTCCCCAACTaGTGCCACAGGGCGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YLLEFTFSHVTSTSAPQLQRLPN*CHRAAA Trigger: CGCAGCCGCCCTGTGGCACAAGTTGGGGAGCCTCTG...CAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | GACATGAGCCATATGTTGCGGGTGAAGCTAGGAACTGTCTTATCCTaGAGAATCCAGTCAGTGATGCGGCCCGTGAAGAAGGGAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DMSHMLRVKLGTVLS*RIQSVMRPVKKGMA Trigger: GGCCATTCCCTTCTTCACGGGCCGCATCACTGACTGGATTCTTCAGGATAAGACAGTTCCTAGCTTCACCCGCAACATATGGCTCATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 90 bp | GAGTGGAGAGCAAGGAGTCCGGTCCAAGTATTCGAATATTTTCTCTaGGGAGCCCACAGCCTTCTGAACAGCCTGGGTGAACTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EWRARSPVQVFEYFL*GAHSLLNSLGELKL Trigger: CAGCTTCAGTTCACCCAGGCTGTTCAGAAGGCTGTGGGCTCCTCAGAGAAAATATTCGAATACTTGGACCGGACTCCTTGCTCTCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171148.2 |
||
| CDS GCA 90 bp | ACGGCCGTGCATGTGTCCCATGGTGATGTTGTAGATTCCATCACTTaGAAACTCCAGCGCTGTGCTGGCTATGGTGAGAATGGACATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TAVHVSHGDVVDSIT*KLQRCAGYGENGHE Trigger: CTCATGTCCATTCTCACCATAGCCAGCACAGCGCTGGAGTTTGCAAGTGATGGAATCTACAACATCACCATGGGACACATGCACGGCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | TTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCATGGACTCGCACACGTaGGCTGTGTCCTCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FRVSPRVYIFSCNKHLRSMDSHT*AVSSVT Trigger: GGTGACTGAGGACACAGCCAACGTGTGCGAGTCCAT...GGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | ATTGCAAGCTGCTTGTCCTTTCTCTCTGTACACTTTGGGCGTTTCTTCTCATTCGCCTCACCCTCCTCGTaGGCAAAGCTCCGCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IASCLSFLSVHFGRFFSFASPSS*AKLRTV Trigger: TACTGTGCGGAGCTTTGCCAACGAGGAGGGTGAGGC...GAATGAGAAGAAACGCCCAAAGTGTACAGAGAGAAAGGACAAGCAGCTTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | GGGTATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAAATGGACTCGCACACGTaGGCTGTGTCCTCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GYLLEFTFSHVTSTSAPQMDSHT*AVSSVT Trigger: GGTGACTGAGGACACAGCCAACGTGTGCGAGTCCAT...TTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCATTCTATCACAACGCCACATAAACCAGGTTTGTGTGTGCATGCTGTGACGAATGAGACAAGGTaGCCGCTGCTGACAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSHSITTPHKPGLCVHAVTNETR*PLLTAP Trigger: AGGGGCTGTCAGCAGCGGCAACCTTGTCTCATTCGT...CACAGCATGCACACACAAACCTGGTTTATGTGGCGTTGTGATAGAATGAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | CATAAACCAGGTTTGTGTGTGCATGCTGTGATACAAGCTCAGCACCGGGAGGGTGCCAAGGCCTCCTTCTaGTTTAGAGTCTTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKPGLCVHAVIQAQHREGAKASF*FRVFIS Trigger: AGAAATGAAGACTCTAAACAAGAAGGAGGCCTTGGC...ACCCTCCCGGTGCTGAGCTTGTATCACAGCATGCACACACAAACCTGGTTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | CACATTCGTGGTAAATTCCGGGTATCTCCTAGAGTTTACATTTTCTCATGTAACGCCTCACCCTCCTCGTaGGCAAAGCTCCGCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HIRGKFRVSPRVYIFSCNASPSS*AKLRTV Trigger: TACTGTGCGGAGCTTTGCCAACGAGGAGGGTGAGGC...GTTACATGAGAAAATGTAAACTCTAGGAGATACCCGGAATTTACCACGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGCCTAAAAAGCAGGGGCAGGTaGATCAGGGTGACCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HQFYYKYQTPIEHPNASLKSRGR*IRVTRV Trigger: CACTCTGGTCACCCTGATCAACCTGCCCCTGCTTTT...TAGGCTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | TATCTCCTAGAGTTTACATTTTCTCATGTAACAAGCACCTCCGCTCCTCAACTGGGACTTTGGGCTGGTTaGGGTAGGCAAAAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: YLLEFTFSHVTSTSAPQLGLWAG*GRQKRH Trigger: ATGTCTCTTTTGCCTACCCAAACCAGCCCAAAGTCC...CAGTTGAGGAGCGGAGGTGCTTGTTACATGAGAAAATGTAAACTCTAGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS-3UTR CAA 90 bp | AAAACACCAGTTTTATTACAAATATCAAACACCCATAGAACACCCAAATGCCAGGGACTTTGGGCTGGTTaGGGTAGGCAAAAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: KTPVLLQISNTHRTPKCQGLWAG*GRQKRH Trigger: ATGTCTCTTTTGCCTACCCAAACCAGCCCAAAGTCC...CTGGCATTTGGGTGTTCTATGGGTGTTTGATATTTGTAATAAAACTGGTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | CCAGCATCCGACACAGCATGTCTCCAGCGTCCCTGTTaGCGCTGGGCGCCCAGAGGCTCCCCAACTTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PASDTACLQRPC*RWAPRGSPTCA Trigger: GGCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGCAACAGGGACGCTGGAGACATGCTGTGTCGGATGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 72 bp | TCCGACACAGCATGTCTCCAGCGTCCCTGTTGCCGCTaGGCGCCCAGAGGCTCCCCAACTTGTGCCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDTACLQRPCCR*APRGSPTCATG Trigger: CCCTGTGGCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGCAACAGGGACGCTGGAGACATGCTGTGTCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CAA 72 bp | CCCAGCATCCGACACAGCATGTCTCCAGCGTCCCTGTaGCCGCTGGGCGCCCAGAGGCTCCCCAACTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSIRHSMSPASL*PLGAQRLPNLC Trigger: GCACAAGTTGGGGAGCCTCTGGGCGCCCAGCGGCAACAGGGACGCTGGAGACATGCTGTGTCGGATGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | CCTCTACCATGGCCCGGTAGCACCCTCCTCTCTTCATaGGCTGCAGGTGGGTGCCCTGCTCGCCGACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPWPGSTLLSS*AAGGCPARRQS Trigger: GCTCTGTCGGCGAGCAGGGCACCCACCTGCAGCTCATGAAGAGAGGAGGGTGCTACCGGGCCATGGTAGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | TCGGAACAAGGCAAGTCCAGGCAGGGCCAAACTCAGTaGGGCCACCAGCGGCTGCAAAGCAGCCAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SEQGKSRQGQTQ*GHQRLQSSQPA Trigger: GGCTGGCTGGCTGCTTTGCAGCCGCTGGTGGCCGCACTGAGTTTGGCCCTGCCTGGACTTGCCTTGTTCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | AGGTTGCCGCTGCTGACAGCCCCTCTGATCACCAGCTaGCCGCCCAGGTACAGAATTCCCACCTTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLPLLTAPLITS*PPRYRIPTFSS Trigger: GCTGCTGAAGGTGGGAATTCTGTACCTGGGCGGGCAGCTGGTGATCAGAGGGGCTGTCAGCAGCGGCAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 72 bp | TTGGGGCTCTCATACAGGAGCCGCTGGACCCGTAGCTaGTTGCCAGCATCCAGGGCACTGGTGGCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLSYRSRWTRS*LPASRALVASS Trigger: GGATGATGCCACCAGTGCCCTGGATGCTGGCAACCAGCTACGGGTCCAGCGGCTCCTGTATGAGAGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CAA 90 bp | AGGCTGAGCTGCTGGGTGATAAGAAGAACCGTCCGAGAAGCCCGCTaGGGGCTCTCATACAGGAGCCGCTGGACCCGTAGCTGGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSCWVIRRTVREAR*GLSYRSRWTRSWLP Trigger: TGGCAACCAGCTACGGGTCCAGCGGCTCCTGTATGAGAGCCCCAAGCGGGCTTCTCGGACGGTTCTTCTTATCACCCAGCAGCTCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | GCTCCCCAACTTGTGCCACAGGGCGGCTGCGGGCAATaGTGCCACATAACTGATAGCGAAGGCATCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: APQLVPQGGCGQ*CHITDSEGIWT Trigger: CGTCCAGATGCCTTCGCTATCAGTTATGTGGCAGCATTGCCCGCAGCCGCCCTGTGGCACAAGTTGGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | GTCTCCTGGCGAAGGACGGCCCGAAACACCTCTCTGTaGACACGGCCGTGCATGTGTCCCATGGTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWRRTARNTSL*TRPCMCPMVML Trigger: CAACATCACCATGGGACACATGCACGGCCGTGTGCACAGAGAGGTGTTTCGGGCCGTCCTTCGCCAGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 72 bp | CAGGGCACTGGTGGCATCATCCAAGATAAGCAGGAGTaGCTTCCGGATCAAGGCTCGGGCCAAGGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGTGGIIQDKQE*LPDQGSGQGHC Trigger: GCAGTGGCCTTGGCCCGAGCCTTGATCCGGAAGCCACTCCTGCTTATCTTGGATGATGCCACCAGTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CAA 72 bp | TGCTGGGTGATAAGAAGAACCGTCCGAGAAGCCCGCTaGGGGCTCTCATACAGGAGCCGCTGGACCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CWVIRRTVREAR*GLSYRSRWTRS Trigger: GCTACGGGTCCAGCGGCTCCTGTATGAGAGCCCCAAGCGGGCTTCTCGGACGGTTCTTCTTATCACCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | CCCCAACTTGTGCCACAGGGCGGCTGCGGGCAATGCTaGCACATAACTGATAGCGAAGGCATCTGGACGACT | + |
|
Preference number: 6 (lower is better) Translates to: PQLVPQGGCGQC*HITDSEGIWTT Trigger: AGTCGTCCAGATGCCTTCGCTATCAGTTATGTGGCAGCATTGCCCGCAGCCGCCCTGTGGCACAAGTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | CACCCTCCTCTCTTCATGAGCTGCAGGTGGGTGCCCTaGTCGCCGACAGAGCCTTCTCTGAGAAAGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: HPPLFMSCRWVP*SPTEPSLRKRM Trigger: CATCCTCTTTCTCAGAGAAGGCTCTGTCGGCGAGCAGGGCACCCACCTGCAGCTCATGAAGAGAGGAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | AGGGGTAGAGGGAGAGCAGGACCTGAACAGCCTGGGTaGACTGAAGCTTCAGCAGCATTCCCGAGACACTCG | + |
|
Preference number: 6 (lower is better) Translates to: RGRGRAGPEQPG*TEASAAFPRHS Trigger: CGAGTGTCTCGGGAATGCTGCTGAAGCTTCAGTTCACCCAGGCTGTTCAGGTCCTGCTCTCCCTCTACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041633.15 |
||
| CDS TCA 72 bp | CTACCTCTGTGTCATAGCCCTGAGGGAACCCAGAGATaGAATCGTGGGCTCCAGACTCCACGGCCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLCHSPEGTQR*NRGLQTPRPQL Trigger: CAGCTGTGGCCGTGGAGTCTGGAGCCCACGATTTCATCTCTGGGTTCCCTCAGGGCTATGACACAGAGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CAA 72 bp | TCGCCGATAAGGCCTCAAGGGCCACCTGCGTGGACTTaGCTAGAGACTCCTGCACCTTCACTGCCAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SPIRPQGPPAWT*LETPAPSLPVT Trigger: AGTCACTGGCAGTGAAGGTGCAGGAGTCTCTAGCAAAGTCCACGCAGGTGGCCCTTGAGGCCTTATCGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 72 bp | GAACCTGCTGGGTTCTTCAGGAAAAACCCTGTCTCCTaGCGAAGGACGGCCCGAAACACCTCTCTGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: EPAGFFRKNPVS*RRTARNTSLCT Trigger: TGTGCACAGAGAGGTGTTTCGGGCCGTCCTTCGCCAGGAGACAGGGTTTTTCCTGAAGAACCCAGCAGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CCA 72 bp | GAATTCCCACCTTCAGCAGCATTCCCGAGACACTCGTaGTCCAGACTTCAGCCACGTAAGCCAAGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EFPPSAAFPRHS*SRLQPRKPRPP Trigger: AGGAGGCCTTGGCTTACGTGGCTGAAGTCTGGACCACGAGTGTCTCGGGAATGCTGCTGAAGGTGGGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CAA 72 bp | AACTTCTGCCTGAACTTCTGGGCCTCACCCTCCTCGTaGGCAAAGCTCCGCACAGTAGGCATCGCCGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: NFCLNFWASPSS*AKLRTVGIADK Trigger: CTTATCGGCGATGCCTACTGTGCGGAGCTTTGCCAACGAGGAGGGTGAGGCCCAGAAGTTCAGGCAGAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CAA 90 bp | ATTTCTTCCAACTTCTGCCTGAACTTCTGGGCCTCACCCTCCTCGTaGGCAAAGCTCCGCACAGTAGGCATCGCCGATAAGGCCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSNFCLNFWASPSS*AKLRTVGIADKASR Trigger: CCTTGAGGCCTTATCGGCGATGCCTACTGTGCGGAGCTTTGCCAACGAGGAGGGTGAGGCCCAGAAGTTCAGGCAGAAGTTGGAAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS TCA 72 bp | CGCACACGTTGGCTGTGTCCTCAGTCACCCGAGATGTaGTGGAACCTGCTGGGTTCTTCAGGAAAAACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTRWLCPQSPEM*WNLLGSSGKTL Trigger: CAGGGTTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCTCGGGTGACTGAGGACACAGCCAACGTGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | CCTCTCTGTGCACACGGCCGTGCATGTGTCCCATGGTaGTGTTGTAGATTCCATCACTTGCAAACTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PLCAHGRACVPW*CCRFHHLQTPA Trigger: CGCTGGAGTTTGCAAGTGATGGAATCTACAACATCACCATGGGACACATGCACGGCCGTGTGCACAGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | AACAGCCTGGGTGAACTGAAGCTGGTAGAGAACGAATaGGACAAGGTTGCCGCTGCTGACAGCCCCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NSLGELKLVENE*DKVAAADSPSD Trigger: ATCAGAGGGGCTGTCAGCAGCGGCAACCTTGTCTCATTCGTTCTCTACCAGCTTCAGTTCACCCAGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 72 bp | TGTGTCCTCAGTCACCCGAGATGTGATGGAACCTGCTaGGTTCTTCAGGAAAAACCCTGTCTCCTGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CVLSHPRCDGTC*VLQEKPCLLAK Trigger: CTTCGCCAGGAGACAGGGTTTTTCCTGAAGAACCCAGCAGGTTCCATCACATCTCGGGTGACTGAGGACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | GCAAGGAGTCCGGTCCAAGTATTCGAATATTTTCTCTaGGGAGCCCACAGCCTTCTGCATGGAGGGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARSPVQVFEYFL*GAHSLLHGGVE Trigger: CTCTACCCCTCCATGCAGAAGGCTGTGGGCTCCTCAGAGAAAATATTCGAATACTTGGACCGGACTCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | AGAGACATCTTGGAACTCCACAAGGCCTTTCATGTTTaGGGGTGCCAACGAGCCACTGAGTGGAGAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RDILELHKAFHV*GCQRATEWRAR Trigger: CCTTGCTCTCCACTCAGTGGCTCGTTGGCACCCTCAAACATGAAAGGCCTTGTGGAGTTCCAAGATGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS CCA 72 bp | AGACTCCACGGCCACAGCTGTGATTTCCTCCATGGTTaGAGTCCGGTTCAGGCCATACGCAATATTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLHGHSCDFLHG*SPVQAIRNIFS Trigger: CGAGAAAATATTGCGTATGGCCTGAACCGGACTCCAACCATGGAGGAAATCACAGCTGTGGCCGTGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS CAA 72 bp | ACGTCAGCCCCTGAAGCACCTGGACTTTGGGCTGGTTaGGGTAGGCAAAAGAGACATCTTGGAACTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: TSAPEAPGLWAG*GRQKRHLGTPQ Trigger: TTGTGGAGTTCCAAGATGTCTCTTTTGCCTACCCAAACCAGCCCAAAGTCCAGGTGCTTCAGGGGCTGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 ENSMUST00000171148.2 |
||
| CDS TCA 72 bp | GCAAGGAGTCCGGTCCAAGTATTCGAATATTTTCTCTaGGGAGCCCACAGCCTTCTGAACAGCCTGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARSPVQVFEYFL*GAHSLLNSLGE Trigger: TTCACCCAGGCTGTTCAGAAGGCTGTGGGCTCCTCAGAGAAAATATTCGAATACTTGGACCGGACTCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171148.2 |
||
| CDS TCA 72 bp | CATATGTTGCGGGTGAAGCTAGGAACTGTCTTATCCTaGAGAATCCAGTCAGTGATGCGGCCCGTGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HMLRVKLGTVLS*RIQSVMRPVKK Trigger: CTTCTTCACGGGCCGCATCACTGACTGGATTCTTCAGGATAAGACAGTTCCTAGCTTCACCCGCAACATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS GCA 72 bp | CATGTGTCCCATGGTGATGTTGTAGATTCCATCACTTaGAAACTCCAGCGCTGTGCTGGCTATGGTGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HVSHGDVVDSIT*KLQRCAGYGEN Trigger: ATTCTCACCATAGCCAGCACAGCGCTGGAGTTTGCAAGTGATGGAATCTACAACATCACCATGGGACACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||
| CDS TCA 72 bp | TTTGCTAGAGACTCCTGCACCTTCACTGCCAGTGACTaGTGCACTTTTCCCAGCTTCTTAGGCAAAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FARDSCTFTASD*CTFPSFLGKRK Trigger: TTTTCTTTTGCCTAAGAAGCTGGGAAAAGTGCATCAGTCACTGGCAGTGAAGGTGCAGGAGTCTCTAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041633.15 ENSMUST00000170086.8 |
||