RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAOK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059981

Ensembl transcript IDs: ENSMUST00000071268.11, ENSMUST00000117394.2, ENSMUST00000214525.2

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGGCCTCCTCCCATTCTCCTTGCTTTGGCACCAGACCTGCTCTaGCATTCCACCAGGTCTGGGGGCCCTGTTGTCCCCAGTTCATGG +
Preference number: 1 (lower is better)
Translates to: GRPPPILLALAPDLL*HSTRSGGPVVPSSW
Trigger: CCATGAACTGGGGACAACAGGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGAATGGGAGGAGGCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR GCA 90 bp CTGGAGGAAGGCCTCCTCCCATTCTCCTTGCTTTGGCACCAGACCTaGTCTGCCATTCCACCAGGTCTGGGGGCCCTGTTGTCCCCAGTT +
Preference number: 1 (lower is better)
Translates to: LEEGLLPFSLLWHQT*SAIPPGLGALLSPV
Trigger: AACTGGGGACAACAGGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGAATGGGAGGAGGCCTTCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR GCA 90 bp ACGTCAGACAGCAATAGGAGAATGGTGAGACTCAGGCACCCTGACTaGAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTC +
Preference number: 1 (lower is better)
Translates to: TSDSNRRMVRLRHPD*KTPDPSGGRPPPIL
Trigger: GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATTGCTGTCTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR TCA 90 bp AAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTaGGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGGAG +
Preference number: 1 (lower is better)
Translates to: KRQDGTGRQTAIGEW*DSGTLTARPLILLE
Trigger: CTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR GCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCGCCTTGGGGCACCAATaGCCAAGCTGGCCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILALGHQ*PSWPGV
Trigger: GACCCCAGGCCAGCTTGGGCATTGGTGCCCCAAGGC...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCATGCCCAAGCTGGCCTaGGGTCACTGGCCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILMPKLA*GHWPAP
Trigger: TGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCAT...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCCACCAATGCCCAAGCTaGCCTGGGGTCACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILHQCPS*PGVTGQ
Trigger: CTGGCCAGTGACCCCAGGCCAGCTTGGGCATTGGTG...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCCCATTCCACCAGGTCTaGGGGCCCTGTTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILPFHQV*GPCCPQ
Trigger: CTGGGGACAACAGGGCCCCCAGACCTGGTGGAATGG...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCACCTTTTATAGGTGGTaGTGGAGGGAGACCCTGGCA +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILTFYRW*WRETLA
Trigger: TGCCAGGGTCTCCCTCCATCACCACCTATAAAAGGT...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGGCTCCTGGTCAGCCTTaGGGCACCAATGCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLAPGQP*GTNAQA
Trigger: AGCTTGGGCATTGGTGCCCCAAGGCTGACCAGGAGC...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCGACCAGATGAATATTTaGCACTCACAGTTCCCACCT +
Preference number: 2 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILDQMNI*HSQFPP
Trigger: AGGTGGGAACTGTGAGTGTCAAATATTCATCTGGTC...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTAAGAAGCTCATGAGATaGGGAGGTCTGATGGGGGAG +
Preference number: 2 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSKKLMR*GGLMGE
Trigger: CTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTT...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTACCTTTTATAGGTGGTaGTGGAGGGAGACCCTGGCA +
Preference number: 2 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSTFYRW*WRETLA
Trigger: TGCCAGGGTCTCCCTCCATCACCACCTATAAAAGGT...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCCTTTGGCACCAGACCTaGTCTGCCATTCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLLWHQT*SAIPPG
Trigger: ACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAG...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTCCTCCCATTCTCCTTaGTTTGGCACCAGACCTGCT +
Preference number: 2 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLSSHSP*FGTRPA
Trigger: AGCAGGTCTGGTGCCAAAGCAAGGAGAATGGGAGGA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CAA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCTCCAAGGTCCTTCCCTaGTCCCCCGCCCCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: VRITNSLLKARPRALCQPSKVLP*SPAPAL
Trigger: CAGGGCTGGGGCGGGGGACAAGGGAAGGACCTTGGA...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR GCA 72 bp AGCAATAGGAGAATGGTGAGACTCAGGCACCCTGACTaGAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: SNRRMVRLRHPD*KTPDPSGGRPP
Trigger: AGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CAA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCGCCCCATCACAAGGGTaGTATAATTCTCTGAAATAT +
Preference number: 3 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILAPSQG*YNSLKY
Trigger: ATATTTCAGAGAATTATACAACCCTTGTGATGGGGC...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
3UTR-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTCAGTGCCCTAAATTaGGGTGGAGAATTGGAACTG +
Preference number: 3 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLSALN*GGELEL
Trigger: CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
3UTR TCA 72 bp AGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTaGAATATAATATATCTAGACCCACCCTTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: SSWPHHKGCIIL*NIIYLDPPFPS
Trigger: GGAGGGGAAGGGTGGGTCTAGATATATTATATTTCAGAGAATTATACAACCCTTGTGATGGGGCCATGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGTCGGCTCAGCGGCCCTaGCACTGCAGCAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRSAQRP*HCSRWA
Trigger: GGCCCACCTGCTGCAGTGCCAGGGCCGCTGAGCCGA...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGGGGGCTGCAGGTGGCTaGAGTGGACCTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRGAAGG*SGPGVI
Trigger: GATGACCCCAGGTCCACTCCAGCCACCTGCAGCCCC...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGGGAGCCAGCAGAGCTaGCTGACGCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPGSQQS*LTPSWW
Trigger: CCACCAGCTTGGCGTCAGCCAGCTCTGCTGGCTCCC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCCGCCTGAGCAGCCCGTaGCTCCTTCTCACCAATGGC +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPRLSSP*LLLTNG
Trigger: GCCATTGGTGAGAAGGAGGCACGGGCTGCTCAGGCG...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGAGCCCGGCAGCCGGTaGATGATGGAGCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPEPGSR*MMELWE
Trigger: TTCCCACAGCTCCATCATCCACCGGCTGCCGGGCTC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGGGCCATGGCTCCAATaGGCCCCTGAACGGGGAACT +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPGPWLQ*APERGT
Trigger: AGTTCCCCGTTCAGGGGCCCATTGGAGCCATGGCCC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTGCWRT*AACFCR
Trigger: ACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCC...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCTGGGGGCATGCCTGGTaGAGGAGGGCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILWGHAW*RRAMAP
Trigger: TGGAGCCATGGCCCTCCTCCACCAGGCATGCCCCCA...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCCTGACGCCAAGCTGGTaGGGGCATGCCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLLTPSW*GHAWWR
Trigger: CCTCCACCAGGCATGCCCCCACCAGCTTGGCGTCAG...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTGGCTGACGCCAAGCTaGTGGGGGCATGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDWLTPS*WGHAWW
Trigger: CCACCAGGCATGCCCCCACCAGCTTGGCGTCAGCCA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCCAGTTTGGAGGCCCTaGGGGAGCCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDPVWRP*GSQQSW
Trigger: CCAGCTCTGCTGGCTCCCCCAGGGCCTCCAAACTGG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGTGGCACTGCAGCAGGTaGGCCGACGTTCTCACCACT +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRWHCSR*ADVLTT
Trigger: AGTGGTGAGAACGTCGGCCCACCTGCTGCAGTGCCA...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGCAGCTCCTTTGATTTaGGGCTCTTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPAAPLI*GSWAAG
Trigger: GCCAGCAGCCCAAGAGCCTCAAATCAAAGGAGCTGC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGCCCCGCTTCCTCTTCTaGCTGGCACTGTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRPRFLF*LALLQL
Trigger: CAGTTGCAACAGTGCCAGGCAGAAGAGGAAGCGGGG...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCCGGGTAGCCTCATGCTaGCGTAACAGCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGARVASC*RNSRAH
Trigger: GTGTGCTCTGCTGTTACGGCAGCATGAGGCTACCCG...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACLRLLG*WRTWAA
Trigger: CGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTLRLLG*WRTWAA
Trigger: CGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCAGCTCCCGCTCATGCTaGCTCTCTGTGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGASSRSC*LSVRIL
Trigger: CAAGATCCGCACAGAGAGCCAGCATGAGCGGGAGCT...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTTGGCTGACGCCAAGCTaGTGGGGGCATGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTWLTPS*WGHAWW
Trigger: CCACCAGGCATGCCCCCACCAGCTTGGCGTCAGCCA...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCCTGGATCTGACGGCTaGCCAGGGAGGCAGTACGAA +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDPGSDG*PGRQYE
Trigger: TTCGTACTGCCTCCCTGGTCAGCCGTCAGATCCAGG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDSCSWI*RLTREA
Trigger: TGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGAAGGCTCTTGTGCTaGGCTTTGGGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRRRLLC*ALGVVS
Trigger: GGAGACCACACCCAAAGCTCAGCACAAGAGCCTTCT...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTGCTGCCGCAGGGCCTaGAACTCTGCCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACCCRRA*NSASWV
Trigger: GACCCAAGAGGCAGAGTTTCAGGCCCTGCGGCAGCA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTTGCTGCCGCAGGGCCTaGAACTCTGCCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTCCRRA*NSASWV
Trigger: GACCCAAGAGGCAGAGTTTCAGGCCCTGCGGCAGCA...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGAAGCAGCACTGGGCTaGGGAATGGGTAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPEAALG*GMGKRM
Trigger: CATCCTCTTACCCATTCCTCAGCCCAGTGCTGCTTC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGCAAAGTGGTCTCGGTTaGGGCAATAAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRQSGLG*GNKLCG
Trigger: GCCGCAGAGCTTATTGCCGCAACCGAGACCACTTTG...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCTGCCCCAGGATGTGCTaGTGGAACTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLCPRMC*WNFRSS
Trigger: GGAGGAGCGGAAGTTCCAGCAGCACATCCTGGGGCA...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTTCAAAGTACTGGCGCTaGCTCCGCAGCAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTSKYWR*LRSSPA
Trigger: AGCGGGGCTGCTGCGGAGGCAGCGCCAGTACTTTGA...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCAGATATGCCAGGCCCTaGAGAGCCCCATGGGTCACA +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILRYARP*RAPWVT
Trigger: TGTGACCCATGGGGCTCTTCAGGGCCTGGCATATCT...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGGCAGGTGCCATGATTaGCGCAGAGCCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACGRCHD*RRAKVP
Trigger: GGGGACTTTGGCTCTGCGTCAATCATGGCACCTGCC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCCATCTGCTAGGCTGTTaGCTGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLHLLGC*LSCSGW
Trigger: CCAGCCAGAGCAGCTCAGTCAACAGCCTAGCAGATG...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCTCAAGCCGGAGCGCCTaGGAGCTGAGCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLSSRSA*ELSISE
Trigger: TTCAGAGATGCTCAGCTCGCAGGCGCTCCGGCTTGA...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTCTCAGCTCCCGCTCATaGTGGCTCTCTGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTLSSRS*WLSVRI
Trigger: GATCCGCACAGAGAGCCAGCATGAGCGGGAGCTGAG...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCCGACGTTCTCACCACTaGTGCCCCCTGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIRRSHH*CPLTLP
Trigger: GGGCAGCGTCAGGGGGCAGCAGTGGTGAGAACGTCG...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCTTGACTGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCAGTCAA...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTTCTCACCAATGGCCTaGTGCCTCCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACFSPMA*CLRASF
Trigger: GAAGCTGGCCCGGAGGCACCAGGCCATTGGTGAGAA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGTGCGCTGGACAGCCTaGAGCTGTCTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTVRWTA*SCLSSS
Trigger: GCTGGAGCTAAGACAGCTCCAGGCTGTCCAGCGCAC...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTGGGGGCATGCCTGGTaGAGGAGGGCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLWGHAW*RRAMAP
Trigger: TGGAGCCATGGCCCTCCTCCACCAGGCATGCCCCCA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTGGTGGGGGCATGCCTaGTGGAGGAGGGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLWWGHA*WRRAMA
Trigger: AGCCATGGCCCTCCTCCACCAGGCATGCCCCCACCA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCCTGACGCCAAGCTGGTaGGGGCATGCCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRILTPSW*GHAWWR
Trigger: CCTCCACCAGGCATGCCCCCACCAGCTTGGCGTCAG...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCGGGAGCCAGCAGAGCTaGCTGACGCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIGSQQS*LTPSWW
Trigger: CCACCAGCTTGGCGTCAGCCAGCTCTGCTGGCTCCC...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGCCAGTTTGGAGGCCCTaGGGGAGCCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLPVWRP*GSQQSW
Trigger: CCAGCTCTGCTGGCTCCCCCAGGGCCTCCAAACTGG...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGTACCAAGCCTGGTTCTaGCAGCAAGATGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRYQAWF*QQDVSS
Trigger: GCTGGAAACATCTTGCTGTCAGAACCAGGCTTGGTA...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGCTGCTCTCGCAGGGCTaGGTCCTGCTCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLLLSQG*VLLMLL
Trigger: CAGGAGCATGAGCAGGACTCAGCCCTGCGAGAGCAG...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTTGCTCTGGTAAGCGTTaGGGAGCTCCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTCSGKR*GAPAPA
Trigger: AGCAGGAGCTGGAGCTCCTCAACGCTTACCAGAGCA...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGCTCCAATGGGCCCCTaGACGGGGAACTGGACGGGA +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSAPMGP*TGNWTG
Trigger: TCCCGTCCAGTTCCCCGTTCAGGGGCCCATTGGAGC...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTAGTGGGAGGAGCCGTTaGGGATGTGGGAAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTSGRSR*GCGKQH
Trigger: GTGTTGCTTCCCACATCCTCAACGGCTCCTCCCACT...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGATCTGCAGCTCCTTTaGCTGAAGGAAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDDLQLL*LKEGRQ
Trigger: CTGCCTGCCTTCCTTCAGTCAAAGGAGCTGCAGATC...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTCCGGGCAAAGTACACTaGTCCAAAGCTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACPGKVH*SKAAMA
Trigger: GGCCATGGCAGCTTTGGAGCAGTGTACTTTGCCCGG...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGCAATCTCTACCTCCTaGAGGGGTTTCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPAISTS*RGFLCT
Trigger: AGTGCACAAGAAACCCCTGCAGGAGGTAGAGATTGC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCACCAGGGCCATTGGGTaGCTCTTGGAACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGATRAIG*LLEQYL
Trigger: AAGATACTGTTCCAAGAGGCACCCAATGGCCCTGGT...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTCGGGTAGCCTCATGCTaGCGTAACAGCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACRVASC*RNSRAH
Trigger: GTGTGCTCTGCTGTTACGGCAGCATGAGGCTACCCG...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTCTCGGGTAGCCTCATaGTGCCGTAACAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDSRVAS*CRNSRA
Trigger: TGCTCTGCTGTTACGGCAGCATGAGGCTACCCGAGA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTCGAACCTGGGCCGCGTaGTTCTGCCGTAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTRTWAA*FCRNSC
Trigger: GCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCG...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCATGGACTGGTCATACTaGTCAGCCAGGATCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLMDWSY*SARIAS
Trigger: GCTGGCGATCCTGGCTGAGCAGTATGACCAGTCCAT...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCCCCCTCCTGCATCATaGCCATCTCTCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDPPPAS*PSLWIQ
Trigger: CTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCTTGTATTGCCGCGTCTaGATCTTACACGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPLYCRV*ILHVSW
Trigger: CCAGGAGACGTGTAAGATCCAGACGCGGCAATACAA...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGCTGAGCTTTGGGTGTaGTCTCCAGCAAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACAELWV*SPASVP
Trigger: GGGCACACTTGCTGGAGACCACACCCAAAGCTCAGC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGCAGGAAGCAGCACTaGGCTGAGGAATGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDGRKQH*AEEWVR
Trigger: TCTTACCCATTCCTCAGCCCAGTGCTGCTTCCTGCC...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATAGTTGGCAGGTGCCATaGTTGACGCAGAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDSWQVP*LTQSQS
Trigger: ACTTTGGCTCTGCGTCAATCATGGCACCTGCCAACT...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCCTGGGAACAGGGTGTaGGCTCCTCTTCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSPGNRV*APLPLG
Trigger: CCCCAGAGGAAGAGGAGCTCACACCCTGTTCCCAGG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCTTGTATTGGCGACACTaGAGTTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAACTTCAGTGTCGCCAATACAA...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTCTCGAAGCAGGTCCTaGTCTAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAGA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTAGAAGGCTCTTGTGCTaGGCTTTGGGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTRRLLC*ALGVVS
Trigger: GGAGACCACACCCAAAGCTCAGCACAAGAGCCTTCT...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCAGCCAGGAGGCCATaGGACAGGAGTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPARRP*DRSPGS
Trigger: GCTCCCTGGACTCCTGTCTCATGGCCTCCTGGCTGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTCACCAATGGCCTGGTaGCTCCGGGCCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLSPMAW*LRASFS
Trigger: TGAGAAGCTGGCCCGGAGGCACCAGGCCATTGGTGA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTGCAACTGCTCCTTTTaGCTCAACAGCCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDCNCSF*LNSHSA
Trigger: GGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTCTGCCTGGCACTGTTaGAACTGCTCCTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDSAWHC*NCSFCL
Trigger: GAGGCAAAAGGAGCAGTTGCAACAGTGCCAGGCAGA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGTCTCCAGCAAGTGTaGCCGAAGAGCCTTGTATTG +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDGLQQV*PKSLVL
Trigger: CAATACAAGGCTCTTCGGGCACACTTGCTGGAGACC...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCGGTCTCCAGCAAGTGTaGCCGAAGAGCCTTGTATTG +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLGLQQV*PKSLVL
Trigger: CAATACAAGGCTCTTCGGGCACACTTGCTGGAGACC...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTATGGACTGGTCATACTaGTCAGCCAGGATCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTMDWSY*SARIAS
Trigger: GCTGGCGATCCTGGCTGAGCAGTATGACCAGTCCAT...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCCAGGGCCTGAAACTCTaGCTCTTGGGTCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLQGLKL*LLGLIK
Trigger: CTTGATGAGACCCAAGAGGCAGAGTTTCAGGCCCTG...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCTCGATCTCACGGGCCTaGCGCTCAAGCAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRISISRA*RSSKLR
Trigger: CCGGAGTTTGCTTGAGCGGCAGGCCCGTGAGATCGA...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCGCTCCAAAGCTGCCATaGCCGATCTCCCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIAPKLP*PISRRS
Trigger: TGACCTCCGGGAGATCGGCCATGGCAGCTTTGGAGC...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCCCGTACAGCATCCTTaGTCCTCTGGATTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDPVQHP*SSGLGP
Trigger: TGGACCTAATCCAGAGGACCAAGGATGCTGTACGGG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTCAGCACCAGGGCCATTaGGTGCCTCTTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTQHQGH*VPLGTV
Trigger: TACTGTTCCAAGAGGCACCCAATGGCCCTGGTGCTG...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATATGCTGGGCACTGAATaGCTGCTCTCTAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDMLGTE*LLSRLV
Trigger: GACCAGTCTAGAGAGCAGCCATTCAGTGCCCAGCAT...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGGGGCTGCAGGTGGCTaGAGTGGACCTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERGAAGG*SGPGVI
Trigger: GATGACCCCAGGTCCACTCCAGCCACCTGCAGCCCC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCCTCCTTCTCACCAATaGCCTGGTGCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSPPSHQ*PGASGP
Trigger: TGGCCCGGAGGCACCAGGCCATTGGTGAGAAGGAGG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGCTTCCTCTTCTGCCTaGCACTGTTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACASSSA*HCCNCS
Trigger: GGAGCAGTTGCAACAGTGCCAGGCAGAAGAGGAAGC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPGCWRT*AACFCR
Trigger: ACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCC...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGAGCCGTTGAGGATGTaGGAAGCAACACTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDEPLRM*EATLVL
Trigger: AAGCACCAGTGTTGCTTCCCACATCCTCAACGGCTC...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCGAGCCGTTGAGGATGTaGGAAGCAACACTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLEPLRM*EATLVL
Trigger: AAGCACCAGTGTTGCTTCCCACATCCTCAACGGCTC...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCTGGGAACAGGGTGTaGGCTCCTCTTCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPGNRV*APLPLG
Trigger: CCCCAGAGGAAGAGGAGCTCACACCCTGTTCCCAGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCTGGCTGGAGGCGCTaGTGGACATGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSGWRR*WTCWAL
Trigger: CAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTGCTCTCGCAGGGCTaGGTCCTGCTCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLLSQG*VLLMLL
Trigger: CAGGAGCATGAGCAGGACTCAGCCCTGCGAGAGCAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCCGAGCTGAGCATCTCTaGAATGGACTGGTCATACTG +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILRAEHL*NGLVIL
Trigger: CAGTATGACCAGTCCATTTCAGAGATGCTCAGCTCG...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGGGAGCGCCTGCGAGCTaGGCATCTCTGAAATGGACT +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLGAPAS*ASLKWT
Trigger: AGTCCATTTCAGAGATGCTCAGCTCGCAGGCGCTCC...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCTCTCTGTGCGGATCTTaGTCTTGCTCTGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLSLCGS*SCSGKR
Trigger: ACGCTTACCAGAGCAAGATCAAGATCCGCACAGAGA...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCTCTCTGTGCGGATCTTaGTCTTGCTCTGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILSLCGS*SCSGKR
Trigger: ACGCTTACCAGAGCAAGATCAAGATCCGCACAGAGA...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGCTCCAATGGGCCCCTaGACGGGGAACTGGACGGGA +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLAPMGP*TGNWTG
Trigger: TCCCGTCCAGTTCCCCGTTCAGGGGCCCATTGGAGC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGGCCCGCCTTAGGGGTTaGGGACTGTTTCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLARLRG*GLFLSS
Trigger: GCTGCTAAGAAACAGTCCTCAACCCCTAAGGCGGGC...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCAGTGGGAGGAGCCGTTaGGGATGTGGGAAGCAACAC +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRISGRSR*GCGKQH
Trigger: GTGTTGCTTCCCACATCCTCAACGGCTCCTCCCACT...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCCCTGGAACTGCTTCTTaGTCTGCAGCTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILPGTAS*SAAPLT
Trigger: AGTCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGG...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCGCCTGAGCAGCCCGTaGCTCCTTCTCACCAATGGC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERRLSSP*LLLTNG
Trigger: GCCATTGGTGAGAAGGAGGCACGGGCTGCTCAGGCG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCAAAGTACTGGCGCTaGCTCCGCAGCAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSKYWR*LRSSPA
Trigger: AGCGGGGCTGCTGCGGAGGCAGCGCCAGTACTTTGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTCACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTHVSWN*FLICSS
Trigger: GGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTG...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCGAAGAGCCTTGTATTaGCGCGTCTGGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDRRALY*RVWILH
Trigger: GTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGAAGCCCAGTCTCATaGTCTCAGCATCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACRSPVS*SQHRRP
Trigger: AGGCCTTCGATGCTGAGAGCATGAGACTGGGCTTCT...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTCAAGGGCCAGCAGTaGTGCCTGCAAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLKGQQ*CLQATS
Trigger: GGAGGTGGCTTGCAGGCAGCACTGCTGGCCCTTGAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAGGGAGGCAGGGTCCTaGGAGTCTGAGATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERREAGS*ESEISA
Trigger: GGCGGAGATCTCAGACTCGCAGGACCCTGCCTCCCT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGAGCCCGGCAGCCGGTaGATGATGGAGCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEEREPGSR*MMELWE
Trigger: TTCCCACAGCTCCATCATCCACCGGCTGCCGGGCTC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCTCCTTCTCACCAATaGCCTGGTGCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPPSHQ*PGASGP
Trigger: TGGCCCGGAGGCACCAGGCCATTGGTGAGAAGGAGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTCAGCACGTGTGCGCTaGACAGCCTGGAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLSARVR*TAWSCL
Trigger: AAGACAGCTCCAGGCTGTCCAGCGCACACGTGCTGA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGCWRT*AACFCR
Trigger: ACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGAILHVS*NCFLIC
Trigger: GCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGAT...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCCCCCAGAGCCATGCTaGAGAAGCCCAGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSPPEPC*RSPVSC
Trigger: GCATGAGACTGGGCTTCTCCAGCATGGCTCTGGGGG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTGGTGGGGGCATGCCTaGTGGAGGAGGGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLWWGHA*WRRAMA
Trigger: AGCCATGGCCCTCCTCCACCAGGCATGCCCCCACCA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCTCTGGCTGGAGGCGCTaGTGGACATGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPSGWRR*WTCWAL
Trigger: CAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGA...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCTGGATCTGACGGCTaGCCAGGGAGGCAGTACGAA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPGSDG*PGRQYE
Trigger: TTCGTACTGCCTCCCTGGTCAGCCGTCAGATCCAGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSCSWI*RLTREA
Trigger: TGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGGAGCGCCTGCGAGCTaGGCATCTCTGAAATGGACT +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSGAPAS*ASLKWT
Trigger: AGTCCATTTCAGAGATGCTCAGCTCGCAGGCGCTCC...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGCCCGCCTTAGGGGTTaGGGACTGTTTCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSARLRG*GLFLSS
Trigger: GCTGCTAAGAAACAGTCCTCAACCCCTAAGGCGGGC...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTGCCCCAGGATGTGCTaGTGGAACTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERCPRMC*WNFRSS
Trigger: GGAGGAGCGGAAGTTCCAGCAGCACATCCTGGGGCA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCGAACCTGGGCCGCGTaGTTCTGCCGTAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSRTWAA*FCRNSC
Trigger: GCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELLRLLG*WRTWAA
Trigger: CGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCAACTGCTTCTTGATCTaGAGCTCCTTTGATTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGANCFLI*SSFDLR
Trigger: CCTCAAATCAAAGGAGCTGCAGATCAAGAAGCAGTT...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTTCAAGCCGGAGCGCCTaGGAGCTGAGCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSSSRSA*ELSISE
Trigger: TTCAGAGATGCTCAGCTCGCAGGCGCTCCGGCTTGA...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCCAGCAGTGCTGCCTaGAAGCCACCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELASSAA*KPPPPW
Trigger: CCAGGGTGGAGGTGGCTTGCAGGCAGCACTGCTGGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp CACCCTGACTGCAAGACCCCTGATCCTTCTGGAGGAAGGCCTCCTCCCATTCTCGCATCCTTGGTCCTCTaGATTAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: HPDCKTPDPSGGRPPPILASLVL*IRSMMT
Trigger: AGTCATCATGGACCTAATCCAGAGGACCAAGGATGC...GAGAATGGGAGGAGGCCTTCCTCCAGAAGGATCAGGGGTCTTGCAGTCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTCATGGCCATCTCTCTaGATTCAGGGCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACSWPSL*IQGLLP
Trigger: AGGAAGAAGGCCCTGAATCCAGAGAGATGGCCATGA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTTGGCTGGAGTGGACCTaGGGTCATCTCTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSWLEWT*GHLWLV
Trigger: TACCAGCCAGAGATGACCCCAGGTCCACTCCAGCCA...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTTCTCACCAATGGCCTaGTGCCTCCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERFSPMA*CLRASF
Trigger: GAAGCTGGCCCGGAGGCACCAGGCCATTGGTGAGAA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTTGTATTGCCGCGTCTaGATCTTACACGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACLYCRV*ILHVSW
Trigger: CCAGGAGACGTGTAAGATCCAGACGCGGCAATACAA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGCTGAGCTTTGGGTGTaGTCTCCAGCAAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSAELWV*SPASVP
Trigger: GGGCACACTTGCTGGAGACCACACCCAAAGCTCAGC...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTCTTGTGCTGAGCTTTaGGTGTGGTCTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACSCAEL*VWSPAS
Trigger: ACTTGCTGGAGACCACACCCAAAGCTCAGCACAAGA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCGGGCCATGGCTCCAATaGGCCCCTGAACGGGGAACT +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPGPWLQ*APERGT
Trigger: AGTTCCCCGTTCAGGGGCCCATTGGAGCCATGGCCC...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGGTGGAGGAGGGCCATaGCTCCAATGGGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLGGGGP*LQWAPE
Trigger: TTCAGGGGCCCATTGGAGCCATGGCCCTCCTCCACC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAAGCCACCTCCACCCTaGGCTGCCAGCAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERKPPPP*AASNGS
Trigger: ACTCCCATTGCTGGCAGCCCAGGGTGGAGGTGGCTT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAGATATGCCAGGCCCTaGAGAGCCCCATGGGTCACA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERRYARP*RAPWVT
Trigger: TGTGACCCATGGGGCTCTTCAGGGCCTGGCATATCT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCATCTGCTAGGCTGTTaGCTGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERHLLGC*LSCSGW
Trigger: CCAGCCAGAGCAGCTCAGTCAACAGCCTAGCAGATG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGCCTGCACGTACTTTaGGGCTCTTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGLHVL*GSWAAG
Trigger: GCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTGCCTCCTGGCCAGATaGGCAAGGCTGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERCLLAR*ARLLFT
Trigger: AGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTGTGCGTGTAAGGTTCTaGCTCCTGGGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSVRVRF*LLGTGC
Trigger: ACACCCTGTTCCCAGGAGGCAGAACCTTACACGCAC...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTGCTGCCCCAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTGGGGCAGCA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGCACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLHVSWN*FLICSS
Trigger: GGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTG...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGCAGGGCCTGAAACTCTaGCTCTTGGGTCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLQGLKL*LLGLIK
Trigger: CTTGATGAGACCCAAGAGGCAGAGTTTCAGGCCCTG...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCCTCAGCTCCCGCTCATaGTGGCTCTCTGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPLSSRS*WLSVRI
Trigger: GATCCGCACAGAGAGCCAGCATGAGCGGGAGCTGAG...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTCGATCTCACGGGCCTaGCGCTCAAGCAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLSISRA*RSSKLR
Trigger: CCGGAGTTTGCTTGAGCGGCAGGCCCGTGAGATCGA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCAGAAGCCCAGTCTCATaGTCTCAGCATCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIRSPVS*SQHRRP
Trigger: AGGCCTTCGATGCTGAGAGCATGAGACTGGGCTTCT...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCTCCCACAGACTCCATaGCGCTGCCTCTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELLPQTP*RCLFLA
Trigger: GGCCAGGAAGAGGCAGCGGCATGGAGTCTGTGGGAG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTTGACTGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCAGTCAA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTGGCTGGAGTGGACCTaGGGTCATCTCTGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERWLEWT*GHLWLV
Trigger: TACCAGCCAGAGATGACCCCAGGTCCACTCCAGCCA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGTGCGCTGGACAGCCTaGAGCTGTCTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLVRWTA*SCLSSS
Trigger: GCTGGAGCTAAGACAGCTCCAGGCTGTCCAGCGCAC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCAGCACGTGTGCGCTaGACAGCCTGGAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSARVR*TAWSCL
Trigger: AAGACAGCTCCAGGCTGTCCAGCGCACACGTGCTGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDILHVS*NCFLIC
Trigger: GCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGAT...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTATCTCTGAAATGGACTaGTCATACTGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTISEMD*SYCSAR
Trigger: CCTGGCTGAGCAGTATGACCAGTCCATTTCAGAGAT...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTGGCACTGCAGCAGGTaGGCCGACGTTCTCACCACT +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLWHCSR*ADVLTT
Trigger: AGTGGTGAGAACGTCGGCCCACCTGCTGCAGTGCCA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAGGCCCATGGGTAGCTaGCCTGCACGTACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERRPMGS*PARTLR
Trigger: CCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGTGCCTGTGCTGAGTaGTCCCAGAGCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGACAE*SQSPSS
Trigger: GCTACTGGGGCTCTGGGACCACTCAGCACAGGCACC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCTCCAGGGTCCCTGTaGGTTCCAATTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSPGSL*VPIGAP
Trigger: AGGGGCTCCAATTGGAACCCACAGGGACCCTGGAGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCACTGGGCTGAGGAATaGGTAAGAGGATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSHWAEE*VRGCPM
Trigger: CATGGGGCATCCTCTTACCCATTCCTCAGCCCAGTG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGCAGGTGCCATGATTaGCGCAGAGCCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGRCHD*RRAKVP
Trigger: GGGGACTTTGGCTCTGCGTCAATCATGGCACCTGCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCTCGAAGCAGGTCCTaGTCTAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTGCTCTGGTAAGCGTTaGGGAGCTCCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLCSGKR*GAPAPA
Trigger: AGCAGGAGCTGGAGCTCCTCAACGCTTACCAGAGCA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGTGCGTGTAAGGTTCTaGCTCCTGGGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERVRVRF*LLGTGC
Trigger: ACACCCTGTTCCCAGGAGGCAGAACCTTACACGCAC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGTATGCTCCCCCTCCTaGATCATGGCCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERVCSPS*IMAISL
Trigger: CAGAGAGATGGCCATGATGCAGGAGGGGGAGCATAC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCACCAATGGCCTGGTaGCTCCGGGCCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSPMAW*LRASFS
Trigger: TGAGAAGCTGGCCCGGAGGCACCAGGCCATTGGTGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGCTGCCCCAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTGGGGCAGCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCCGAAGAGCCTTGTATTaGCGCGTCTGGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIRRALY*RVWILH
Trigger: GTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCG...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCCTCAGAGCTACTCTCTaGTCCAGCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLLRATL*SSSLSS
Trigger: GGAGCTGAGGGAGCTGGAGCAGAGAGTAGCTCTGAG...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCCTCAGAGCTACTCTCTaGTCCAGCTCCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPLRATL*SSSLSS
Trigger: GGAGCTGAGGGAGCTGGAGCAGAGAGTAGCTCTGAG...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCAGATGAGCAAGGCTaGTCTTCACTAGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPDEQG*SSLGVP
Trigger: AGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAAGGACAGCCAACAGTaGAGTACCCTGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERKDSQQ*STLSQE
Trigger: CTCCTGGCTCAGGGTACTGCACTGTTGGCTGTCCTT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGCCAGTTCCAGCCCTTaGACACAGCCCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERASSSP*TQPKLL
Trigger: CAAGAGTTTGGGCTGTGTGCAAGGGCTGGAACTGGC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCTCCAAAGCTGCCATaGCCGATCTCCCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELAPKLP*PISRRS
Trigger: TGACCTCCGGGAGATCGGCCATGGCAGCTTTGGAGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTGGAGCCATCCAGTATaGAGTACCCACAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GANICPHHHCVGFKHTACWSHPV*STHKRV
Trigger: AACTCTTTTGTGGGTACTCCATACTGGATGGCTCCA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCCCCTCCTGCATCATaGCCATCTCTCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPPPAS*PSLWIQ
Trigger: CTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGCTTCCTCTTCTGCCTaGCACTGTTGCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERASSSA*HCCNCS
Trigger: GGAGCAGTTGCAACAGTGCCAGGCAGAAGAGGAAGC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGTGCGCTGGACAGCCTaGAGCTGTCTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELVRWTA*SCLSSS
Trigger: GCTGGAGCTAAGACAGCTCCAGGCTGTCCAGCGCAC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTCAGCACGTGTGCGCTaGACAGCCTGGAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLSARVR*TAWSCL
Trigger: AAGACAGCTCCAGGCTGTCCAGCGCACACGTGCTGA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCAGCTCCCGCTCATGCTaGCTCTCTGTGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLSSRSC*LSVRIL
Trigger: CAAGATCCGCACAGAGAGCCAGCATGAGCGGGAGCT...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGTCAGAACTGGACCCTaGACCCAGCCAAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERVRTGP*TQPSLN
Trigger: GTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGAC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCTGTGGGTTCCAATTaGAGCCCCTCCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPVGSN*SPSLFF
Trigger: GAAGAAGAGGGAGGGGCTCCAATTGGAACCCACAGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGAGGTAAAGCCAGGCTaGGCCAAGCTAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELEVKPG*AKLGAR
Trigger: CCTGGCTCCTAGCTTGGCCCAGCCTGGCTTTACCTC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAGTTGGCAGGTGCCATaGTTGACGCAGAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSWQVP*LTQSQS
Trigger: ACTTTGGCTCTGCGTCAATCATGGCACCTGCCAACT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCCTTCAAAAGAACCTCTaGGGTTGGTCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRILQKNL*GWSVLR
Trigger: CCTCAAGACAGACCAACCTCAGAGGTTCTTTTGAAG...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTCCTGGGATGCCAGTaGTGGGACTCTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLLGCQ*WDSNLL
Trigger: AAGGAGATTAGAGTCCCATCACTGGCATCCCAGGAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCCGGGCAAAGTACACTaGTCCAAAGCTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELPGKVH*SKAAMA
Trigger: GGCCATGGCAGCTTTGGAGCAGTGTACTTTGCCCGG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GGAGCTGGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTACCAGACATCCACTTTaGCATCATATTGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GAGANICPHHHCVGFKHTTRHPL*HHIVPH
Trigger: ATGAGGGACAATATGATGGCAAAGTGGATGTCTGGT...AGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGTATGCTCCCCCTCCTaGATCATGGCCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLVCSPS*IMAISL
Trigger: CAGAGAGATGGCCATGATGCAGGAGGGGGAGCATAC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTGCAACTGCTCCTTTTaGCTCAACAGCCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERCNCSF*LNSHSA
Trigger: GGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCCCCGCTTCCTCTTCTaGCTGGCACTGTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELPRFLF*LALLQL
Trigger: CAGTTGCAACAGTGCCAGGCAGAAGAGGAAGCGGGG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCGGGTAGCCTCATGCTaGCGTAACAGCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELRVASC*RNSRAH
Trigger: GTGTGCTCTGCTGTTACGGCAGCATGAGGCTACCCG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCTTCTGCCGTAATTCTTaGTCCCGTCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: NICPHHHCVGFKHTACRIFCRNS*SRRLLY
Trigger: GTACAACAAGCGACGGGAGCAAGAATTACGGCAGAA...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGTTCTGCCGTAATTCTTaGTCCCGTCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLFCRNS*SRRLLY
Trigger: GTACAACAAGCGACGGGAGCAAGAATTACGGCAGAA...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCGAACCTGGGCCGCGTaGTTCTGCCGTAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELRTWAA*FCRNSC
Trigger: GCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCAGACTCCATGCCGCTaGCTCTTCCTGGCCAATAAT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERQTPCR*LFLANN
Trigger: ATTATTGGCCAGGAAGAGGCAGCGGCATGGAGTCTG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCCGTACAGCATCCTTaGTCCTCTGGATTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPVQHP*SSGLGP
Trigger: TGGACCTAATCCAGAGGACCAAGGATGCTGTACGGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGATGCTGGGCACTGAATaGCTGCTCTCTAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERMLGTE*LLSRLV
Trigger: GACCAGTCTAGAGAGCAGCCATTCAGTGCCCAGCAT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCCAGGATTGCCTCCTaGCCAGATGAGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSRIAS*PDEQGC
Trigger: GCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGAATCCTCTGCTCCTCTaGCTCCAAGGTAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERNPLLL*LQGSPF
Trigger: GAAGGGACTACCTTGGAGCCAGAGGAGCAGAGGATT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGACCCAGCCAAGCTTaGACTCCACATCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGPSQA*TPHPQG
Trigger: ACCTTGTGGATGTGGAGTTCAAGCTTGGCTGGGTCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCTGGGAAGTGACTGTATaGTCCCCCTCCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLWEVTV*SPSCIM
Trigger: CATGATGCAGGAGGGGGAGCATACAGTCACTTCCCA...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCAAAGTGGTCTCGGTTaGGGCAATAAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELQSGLG*GNKLCG
Trigger: GCCGCAGAGCTTATTGCCGCAACCGAGACCACTTTG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCTCGGGTAGCCTCATaGTGCCGTAACAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSRVAS*CRNSRA
Trigger: TGCTCTGCTGTTACGGCAGCATGAGGCTACCCGAGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCAGCACCAGGGCCATTaGGTGCCTCTTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELQHQGH*VPLGTV
Trigger: TACTGTTCCAAGAGGCACCCAATGGCCCTGGTGCTG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGAGGAGTCCAGGGAGCTaGCTAGTAGGGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELRSPGS*LVGYCL
Trigger: GAGACAGTACCCTACTAGCCAGCTCCCTGGACTCCT...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGGCCCGAAAGACCATaGGTGACAGGCGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELGPERP*VTGVAK
Trigger: TTTTGCTACGCCTGTCACCCATGGTCTTTCGGGCCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp GGGCCCTGTTGTCCCCAGTTCATGGCCCCATCACAAGGGTTGTATAATTCTCTGCTGCCATTTCTCATTTaGTTGCTTCCCACTATAGGA +
Preference number: 4 (lower is better)
Translates to: GPCCPQFMAPSQGLYNSLLPFLI*LLPTIG
Trigger: TCCTATAGTGGGAAGCAATCAAATGAGAAATGGCAG...CAGAGAATTATACAACCCTTGTGATGGGGCCATGAACTGGGGACAACAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTTCAAAAGAACCTCTaGGGTTGGTCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLQKNL*GWSVLR
Trigger: CCTCAAGACAGACCAACCTCAGAGGTTCTTTTGAAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGGGAAGTGACTGTATaGTCCCCCTCCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELWEVTV*SPSCIM
Trigger: CATGATGCAGGAGGGGGAGCATACAGTCACTTCCCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCTGCCTGGCACTGTTaGAACTGCTCCTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSAWHC*NCSFCL
Trigger: GAGGCAAAAGGAGCAGTTGCAACAGTGCCAGGCAGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTTCTGCCGTAATTCTTaGTCCCGTCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERFCRNS*SRRLLY
Trigger: GTACAACAAGCGACGGGAGCAAGAATTACGGCAGAA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCGACCAGTGTCCTGACTaGAGAGCAGGAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPDQCPD*RAGDSF
Trigger: GAATGAATCTCCTGCTCTCCAGTCAGGACACTGGTC...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCTCTTGTGCTGAGCTTTaGGTGTGGTCTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPSCAEL*VWSPAS
Trigger: ACTTGCTGGAGACCACACCCAAAGCTCAGCACAAGA...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR TCA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCCCTGGAACTGCTTCTTaGTCTGCAGCTCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLPGTAS*SAAPLI
Trigger: AATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGG...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGAACAGTGCAGTACCCTaGGCCAGGAGTAAGAACAGA +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELNSAVP*ARSKNR
Trigger: TCTGTTCTTACTCCTGGCTCAGGGTACTGCACTGTT...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCAATCTCTACCTCCTaGAGGGGTTTCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELAISTS*RGFLCT
Trigger: AGTGCACAAGAAACCCCTGCAGGAGGTAGAGATTGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGACCAGGGCCATTGGGTaGCTCTTGGAACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELTRAIG*LLEQYL
Trigger: AAGATACTGTTCCAAGAGGCACCCAATGGCCCTGGT...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCATGGCCATCTCTCTaGATTCAGGGCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELSWPSL*IQGLLP
Trigger: AGGAAGAAGGCCCTGAATCCAGAGAGATGGCCATGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCATCTCTGAAATGGACTaGTCATACTGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPISEMD*SYCSAR
Trigger: CCTGGCTGAGCAGTATGACCAGTCCATTTCAGAGAT...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCCGCTGCCTCTTCCTaGCCAATAATATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELAAASS*PIIFLS
Trigger: GGAGAGAAATATTATTGGCCAGGAAGAGGCAGCGGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCTGCCATTTCTCATTTaGTTGCTTCCCACTATAGGA +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLPFLI*LLPTIG
Trigger: TCCTATAGTGGGAAGCAATCAAATGAGAAATGGCAG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR TCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTTGTATTGGCGACACTaGAGTTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAACTTCAGTGTCGCCAATACAA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGACCAGACATCCACTTTaGCATCATATTGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERTRHPL*HHIVPH
Trigger: ATGAGGGACAATATGATGGCAAAGTGGATGTCTGGT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCATCCTTGGTCCTCTaGATTAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELASLVL*IRSMMT
Trigger: AGTCATCATGGACCTAATCCAGAGGACCAAGGATGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGACTCCTATGTTTTTGTaGGCTGGAACTAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERTPMFL*AGTKGS
Trigger: GGAACCTTTAGTTCCAGCCCACAAAAACATAGGAGT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGATAATATTTCTCTCCTaGGATGCCAGTGATGGGACT +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERIIFLS*DASDGT
Trigger: AGTCCCATCACTGGCATCCCAGGAGAGAAATATTAT...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTTCCTTGATGATATCCTaGCATTTCTCATTTGATTGC +
Preference number: 4 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSSLMIS*HFSFDC
Trigger: GCAATCAAATGAGAAATGGCAGGATATCATCAAGGA...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR GCA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCTGCAGGGGTTTCTTGTaGACTTCTAGAAGATCAGAA +
Preference number: 4 (lower is better)
Translates to: VRITNSLLKARPRALCQPCRGFL*TSRRSE
Trigger: TTCTGATCTTCTAGAAGTGCACAAGAAACCCCTGCA...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CCA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGGAGCCATCCAGTATaGAGTACCCACAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VMGDKVLSALNLGGELELWSHPV*STHKRV
Trigger: AACTCTTTTGTGGGTACTCCATACTGGATGGCTCCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR GCA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCCTTGATGATATCCTaGCATTTCTCATTTGATTGC +
Preference number: 4 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSLMIS*HFSFDC
Trigger: GCAATCAAATGAGAAATGGCAGGATATCATCAAGGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp TGGAGGCCCTGGGGGAGCCAGCAGAGCTGGCTGACGCCAAGCTGGTaGGGGCATGCCTGGTGGAGGAGGGCCATGGCTCCAATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: WRPWGSQQSWLTPSW*GHAWWRRAMAPMGP
Trigger: GGGGCCCATTGGAGCCATGGCCCTCCTCCACCAGGCATGCCCCCACCAGCTTGGCGTCAGCCAGCTCTGCTGGCTCCCCCAGGGCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 90 bp GTCCCTGGTGGTAGCTGTCGGGAAGCAGAGAGCCCAAGACGGCGTTaGCTGCGTGGCAGCAGCCGAGGGATCCGACTAGGCCGTTCACCC +
Preference number: 5 (lower is better)
Translates to: VPGGSCREAESPRRR*LRGSSRGIRLGRSP
Trigger: GGGTGAACGGCCTAGTCGGATCCCTCGGCTGCTGCCACGCAGCCAACGCCGTCTTGGGCTCTCTGCTTCCCGACAGCTACCACCAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 90 bp CAGGATGTGCTGCTGGAACTTCCGCTCCTCCGCCTGAGCAGCCCGTaGCTCCTTCTCACCAATGGCCTGGTGCCTCCGGGCCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QDVLLELPLLRLSSP*LLLTNGLVPPGQLL
Trigger: GAGAAGCTGGCCCGGAGGCACCAGGCCATTGGTGAGAAGGAGGCACGGGCTGCTCAGGCGGAGGAGCGGAAGTTCCAGCAGCACATCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 90 bp GTTGAGGATGTGGGAAGCAACACTGGTGCTTCGGCTCAGCGGCCCTaGCACTGCAGCAGGTGGGCCGACGTTCTCACCACTGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: VEDVGSNTGASAQRP*HCSRWADVLTTAAP
Trigger: GGGGGCAGCAGTGGTGAGAACGTCGGCCCACCTGCTGCAGTGCCAGGGCCGCTGAGCCGAAGCACCAGTGTTGCTTCCCACATCCTCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 90 bp CTGAGTGGTCCCAGAGCCCCAGTAGCAGGGAGGCCCATGGGTAGCTaGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: LSGPRAPVAGRPMGS*PARTLRLLGCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCTCCCTGCTACTGGGGCTCTGGGACCACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCGCCAGGATCGCCAGCTaGCGGGTCTGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGAARIAS*RVCSSL
Trigger: CAAGGAGGAGCAGACCCGCAAGCTGGCGATCCTGGC...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp TCTTCCACCCGTTGCTCTAGCAGTGCCCGCCTCAGAGCTACTCTCTaGTCCAGCTCCCTCAGCTCCCGCTCATGCTGGCTCTCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: SSTRCSSSARLRATL*SSSLSSRSCWLSVR
Trigger: CCGCACAGAGAGCCAGCATGAGCGGGAGCTGAGGGAGCTGGAGCAGAGAGTAGCTCTGAGGCGGGCACTGCTAGAGCAACGGGTGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp AGGCCCATGGGTAGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RPMGSWPARTLRLLG*WRTWAACFCRNSCS
Trigger: GGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp CCCATGGGTAGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTaGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: PMGSWPARTLRLLGC*RTWAACFCRNSCSR
Trigger: ACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCCGGGTCTGCTCCTCCTaGAGCCGCTTAAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPRVCSS*SRLRRL
Trigger: GAGCCTTCTTAAGCGGCTCAAGGAGGAGCAGACCCG...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGCCAGGATCGCCAGCTaGCGGGTCTGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDARIAS*RVCSSL
Trigger: CAAGGAGGAGCAGACCCGCAAGCTGGCGATCCTGGC...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGGGGCCCTAACCAGTTaGGAGGCCCTGGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACGALTS*EALGEP
Trigger: TGGCTCCCCCAGGGCCTCCAAACTGGTTAGGGCCCC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp GAGCCCGGCAGCCGGTGGATGATGGAGCTGTGGGAAGTGACTGTATaGTCCCCCTCCTGCATCATGGCCATCTCTCTGGATTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: EPGSRWMMELWEVTV*SPSCIMAISLDSGP
Trigger: AGGCCCTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGGAGCATACAGTCACTTCCCACAGCTCCATCATCCACCGGCTGCCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 90 bp AGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGTCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SWPARTLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp TGGAGCCCCTCCCTCTTCTTCCTCCTCCTCTTCCTCCTCCGGGACTaGAGTCAGAACTGGACCCTGGACCCAGCCAAGCTTGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: WSPSLFFLLLFLLRD*SQNWTLDPAKLELH
Trigger: GTGGAGTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAGTCCCGGAGGAGGAAGAGGAGGAGGAAGAAGAGGGAGGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp ATCTGGGGAAGGACAGCCATCTCCAGGGTCCCTGTGGGTTCCAATTaGAGCCCCTCCCTCTTCTTCCTCCTCCTCTTCCTCCTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: IWGRTAISRVPVGSN*SPSLFFLLLFLLRD
Trigger: GTCCCGGAGGAGGAAGAGGAGGAGGAAGAAGAGGGAGGGGCTCCAATTGGAACCCACAGGGACCCTGGAGATGGCTGTCCTTCCCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp TGCCCCATGTCAGGCCATTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGTCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CPMSGHLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATGGCCTGACATGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCGCATCTGCTAGGCTGTaGACTGAGCTGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPASARL*TELLWL
Trigger: CAGCCAGAGCAGCTCAGTCAACAGCCTAGCAGATGC...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCTGCTCCCGTCGCTTGTaGTACTCCAGCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPCSRRL*YSSWLP
Trigger: AGGCAACCAGCTGGAGTACAACAAGCGACGGGAGCA...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCTGCTCCCGTCGCTTGTaGTACTCCAGCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGACSRRL*YSSWLP
Trigger: AGGCAACCAGCTGGAGTACAACAAGCGACGGGAGCA...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS TCA 90 bp AGGCTGTGCCGAGCCAGTAGCATCTTGCGCTTGTATTGGCGACACTaGAGTTCAAAGTACTGGCGCTGCCTCCGCAGCAGCCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLCRASSILRLYWRH*SSKYWRCLRSSPAS
Trigger: GGAAGCGGGGCTGCTGCGGAGGCAGCGCCAGTACTTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATGCTACTGGCTCGGCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS TCA 90 bp CTCCTCTCCCAGCATCCTTTGGTCCAGGATTGCCTCCTGGCCAGATaGGCAAGGCTGCTCTTCACTAGGGGTGCCTGTGCTGAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLSQHPLVQDCLLAR*ARLLFTRGACAEWS
Trigger: GGACCACTCAGCACAGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGATGCTGGGAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 90 bp CCTCCGGGACTGGAGTCAGAACTGGACCCTGGACCCAGCCAAGCTTaGACTCCACATCCACAAGGTTCCCACCCTCCTTCTCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: PPGLESELDPGPSQA*TPHPQGSHPPSPTD
Trigger: GTCTGTGGGAGAAGGAGGGTGGGAACCTTGTGGATGTGGAGTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAGTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 90 bp CCAGAGGAGGACCCCACTGCAAAGGATAGGCCAGCCAGGAGGCCATaGGACAGGAGTCCAGGGAGCTGGCTAGTAGGGTACTGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PEEDPTAKDRPARRP*DRSPGSWLVGYCLR
Trigger: TCTGAGACAGTACCCTACTAGCCAGCTCCCTGGACTCCTGTCTCATGGCCTCCTGGCTGGCCTATCCTTTGCAGTGGGGTCCTCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 90 bp AGCATCCTTTGGTCCAGGATTGCCTCCTGGCCAGATGAGCAAGGCTaGTCTTCACTAGGGGTGCCTGTGCTGAGTGGTCCCAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SILWSRIASWPDEQG*SSLGVPVLSGPRAP
Trigger: TGGGGCTCTGGGACCACTCAGCACAGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 90 bp TGGGTAAGAGGATGCCCCATGTCAGGCCATTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WVRGCPMSGHLRLLG*WRTWAACFCRNSCS
Trigger: GGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATGGCCTGACATGGGGCATCCTCTTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS CCA 90 bp GTAAGAGGATGCCCCATGTCAGGCCATTTGAGGCTCTTGGGCTGCTaGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: VRGCPMSGHLRLLGC*RTWAACFCRNSCSR
Trigger: ACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATGGCCTGACATGGGGCATCCTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATGGGGGAGCTGGAGCCTCCCGTACAGCATCCTaGGTCCTCTGGATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: GQPQEAHEMRRSDGGAGASRTAS*VLWIRS
Trigger: GGACCTAATCCAGAGGACCAAGGATGCTGTACGGGA...GGCTCCAGCTCCCCCATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCGGGTCTGCTCCTCCTaGAGCCGCTTAAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDRVCSS*SRLRRL
Trigger: GAGCCTTCTTAAGCGGCTCAAGGAGGAGCAGACCCG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS TCA 90 bp CTCTTGGGTCTCATCAAGCCGGAGCGCCTGCGAGCTGAGCATCTCTaGAATGGACTGGTCATACTGCTCAGCCAGGATCGCCAGCTTGCG +
Preference number: 5 (lower is better)
Translates to: LLGLIKPERLRAEHL*NGLVILLSQDRQLA
Trigger: CGCAAGCTGGCGATCCTGGCTGAGCAGTATGACCAGTCCATTTCAGAGATGCTCAGCTCGCAGGCGCTCCGGCTTGATGAGACCCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 90 bp CCCGGTCTCCTACAGCCCCACAGCCCTGTAGGGCCCGAAAGACCATaGGTGACAGGCGTAGCAAAATCCTCAACCAGAGTCGAGAGATAC +
Preference number: 5 (lower is better)
Translates to: PGLLQPHSPVGPERP*VTGVAKSSTRVERY
Trigger: GTATCTCTCGACTCTGGTTGAGGATTTTGCTACGCCTGTCACCCATGGTCTTTCGGGCCCTACAGGGCTGTGGGGCTGTAGGAGACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGAGCCCAAGACGGCGTaGGCTGCGTGGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEEREPKTA*AAWQQP
Trigger: CGGCTGCTGCCACGCAGCCAACGCCGTCTTGGGCTC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTCCCATGTCAGGCCATTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACPMSGH*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAATGGCCTGACATGGG...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS GCA 90 bp CGGTGGATGATGGAGCTGTGGGAAGTGACTGTATGCTCCCCCTCCTaGATCATGGCCATCTCTCTGGATTCAGGGCCTTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RWMMELWEVTVCSPS*IMAISLDSGPSSSS
Trigger: GGAGGAGGAAGAAGGCCCTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGGAGCATACAGTCACTTCCCACAGCTCCATCATCCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 90 bp ATCTGCAGCTCCTTTGATTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGTCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ICSSFDLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCAAAGGAGCTGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGGATCATCATATAGGTaGTCTGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCAGACAACCTATATGATGATCC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATTCTTGCTCCCGTCGCTaGTTGTACTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDSCSRR*LYSSWL
Trigger: CAACCAGCTGGAGTACAACAAGCGACGGGAGCAAGA...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp TGCCCAAGCTGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGTCCTGGAACTGCTTCTaGATCTGCAGCTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: CPSWPGVTGQPQEAHEMRSWNCF*ICSSFD
Trigger: GTCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGA...CCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCAGCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTCTTGCTCCCGTCGCTaGTTGTACTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACSCSRR*LYSSWL
Trigger: CAACCAGCTGGAGTACAACAAGCGACGGGAGCAAGA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTGCAGCTCCTTTGATTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACCSSFD*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAATCAAAGGAGCTGCA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp TGGCCTGGGGTCACTGGCCAGCCCCAAGAAGCTCATGAGATGAGGAGGTCTGATCCGAAGAGCCTTGTATaGCCGCGTCTGGATCTTACA +
Preference number: 5 (lower is better)
Translates to: WPGVTGQPQEAHEMRRSDPKSLV*PRLDLT
Trigger: TGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGG...ATCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGACCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTCTGAAACTCTGCCTCTaGGGTCTCATCAAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACLKLCL*GLIKPE
Trigger: CTCCGGCTTGATGAGACCCAAGAGGCAGAGTTTCAG...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGGGGCCCTAACCAGTTaGGAGGCCCTGGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLGALTS*EALGEP
Trigger: TGGCTCCCCCAGGGCCTCCAAACTGGTTAGGGCCCC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp CTCGAAGCAGGTCCTGATCTAGGCTGTGCCGAGCCAGTAGCATCTTaGGCTTGTATTGGCGACACTGAAGTTCAAAGTACTGGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: LEAGPDLGCAEPVAS*ACIGDTEVQSTGAA
Trigger: GGCAGCGCCAGTACTTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATGCTACTGGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 90 bp GTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTTGTATTGCCGCGTCTaGATCTTACACGTCTCCTGGAACTGCTTCTTGATCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VVSSKCARRALYCRV*ILHVSWNCFLICSS
Trigger: GGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp TCTCCTTGCTTTGGCACCAGACCTGCTCTGCCATTCCACCAGGTCTGGGGGCCCCATCTTGCGCTTGTATaGGCGACACTGAAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SPCFGTRPALPFHQVWGPHLALV*ATLKFK
Trigger: TTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATG...GGGCCCCCAGACCTGGTGGAATGGCAGAGCAGGTCTGGTGCCAAAGCAAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTCCGAAGAGCCTTGTATaGCCGCGTCTGGATCTTACA +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACPKSLV*PRLDLT
Trigger: TGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGG...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp GCTTTGGGTGTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTTGTATTaGCGCGTCTGGATCTTACACGTCTCCTGGAACTGCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: ALGVVSSKCARRALY*RVWILHVSWNCFLI
Trigger: GATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACACCCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 90 bp AAGAAGGCTCTTGTGCTGAGCTTTGGGTGTGGTCTCCAGCAAGTGTaGCCGAAGAGCCTTGTATTGCCGCGTCTGGATCTTACACGTCTC +
Preference number: 5 (lower is better)
Translates to: KKALVLSFGCGLQQV*PKSLVLPRLDLTRL
Trigger: GAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACACCCAAAGCTCAGCACAAGAGCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGTACCCACAAAAGAGTaGGCAGGTGCCATGATTGAC +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACVPTKE*AGAMID
Trigger: GTCAATCATGGCACCTGCCAACTCTTTTGTGGGTAC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCTTTGATTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: NICPHHHCVGFKHTACRIFDLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCAAA...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCCTGAAACTCTGCCTCTaGGGTCTCATCAAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: NICPHHHCVGFKHTACRILKLCL*GLIKPE
Trigger: CTCCGGCTTGATGAGACCCAAGAGGCAGAGTTTCAG...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCGTACTTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERRTLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGGCCATTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLGHLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATGGCC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS TCA 90 bp TGTATTGCCGCGTCTGGATCTTACACGTCTCCTGGAACTGCTTCTTaGTCTGCAGCTCCTTTGACTGAAGGAAGGCAGGCAGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: CIAASGSYTSPGTAS*SAAPLTEGRQAGSS
Trigger: GCTGCTTCCTGCCTGCCTTCCTTCAGTCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp TCAAGCACACTGCCTGTAGGATCAGGCACCACCCACTCCCACCTTGCCCTACTCAAGAACCGCACTTCCTaGATGATATCCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: SSTLPVGSGTTHSHLALLKNRTS*MISCHF
Trigger: GAAATGGCAGGATATCATCAAGGAAGTGCGGTTCTT...GAGTAGGGCAAGGTGGGAGTGGGTGGTGCCTGATCCTACAGGCAGTGTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTGACCAGACATCCACTTaGCCATCATATTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACDQTST*PSYCPS
Trigger: TGAGGGACAATATGATGGCAAAGTGGATGTCTGGTC...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTAAGTGGGAGGAGCCGTaGAGGATGTGGGAAGCAACA +
Preference number: 5 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSKWEEP*RMWEAT
Trigger: TGTTGCTTCCCACATCCTCAACGGCTCCTCCCACTT...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTGTTGCCGTACCCATTaGCCCCCAGCTGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERCCRTH*PPAAIA
Trigger: AGCTATGGCAGCTGGGGGCAAATGGGTACGGCAACA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 90 bp ACATCTCTATGGATCATGTTGTGTGAGTGTAGATATGCCAGGCCCTaGAGAGCCCCATGGGTCACAGCTGCAATCTCTACCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TSLWIMLCECRYARP*RAPWVTAAISTSCR
Trigger: CCTGCAGGAGGTAGAGATTGCAGCTGTGACCCATGGGGCTCTTCAGGGCCTGGCATATCTACACTCACACAACATGATCCATAGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 90 bp AGAGCCTTGTATTGCCGCGTCTGGATCTTACACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCCTTTGATTTGAGGCTCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RALYCRVWILHVSWN*FLICSSFDLRLLGC
Trigger: GCAGCCCAAGAGCCTCAAATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS GCA 90 bp TGTGGGCTGGAACTAAAGGTTCCCATTTCTTCCCCCAGAATCCTCTaGTCCTCTGGCTCCAAGGTAGTCCCTTCCTTTCCCAGAATCCTT +
Preference number: 5 (lower is better)
Translates to: CGLELKVPISSPRIL*SSGSKVVPSFPRIL
Trigger: AAGGATTCTGGGAAAGGAAGGGACTACCTTGGAGCCAGAGGAGCAGAGGATTCTGGGGGAAGAAATGGGAACCTTTAGTTCCAGCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp GCCCGAAGAGCCTTGTATTGCCGCGTCTGGATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGCAGCTCCTTTGATTTGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ARRALYCRVWILHVS*NCFLICSSFDLRLL
Trigger: CAAGAGCCTCAAATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCTTCTCAGGGTCATCCTaGAAGAAGAGCTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: NICPHHHCVGFKHTACRIFSGSS*KKSSAT
Trigger: TGTGGCTGAGCTCTTCTTCAAGGATGACCCTGAGAA...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTTTGCAACTGCTCCTTTaGCCTCAACAGCCACTCAGC +
Preference number: 5 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSLQLLL*PQQPLS
Trigger: GCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCAA...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCTTGCTCCCGTCGCTaGTTGTACTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSCSRR*LYSSWL
Trigger: CAACCAGCTGGAGTACAACAAGCGACGGGAGCAAGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGGCCTGCACGTACTTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELWPART*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GGAGCCAACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTTCTCTATGGATCATGTaGTGTGAGTGTAGATATGCC +
Preference number: 5 (lower is better)
Translates to: GANICPHHHCVGFKHTACSLWIM*CECRYA
Trigger: GGCATATCTACACTCACACAACATGATCCATAGAGA...ACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AATAGGAGAATGGTGAGACTCAGGCACCCTGACTGCAAGACCCCTGATCCTTCTCTCATTGCATTCATGTaGAACAGTGGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: NRRMVRLRHPDCKTPDPSLIAFM*NSGGFR
Trigger: GCGGAAGCCACCACTGTTCAACATGAATGCAATGAG...AGAAGGATCAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCATCTGCTAGGCTGTaGACTGAGCTGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELASARL*TELLWL
Trigger: CAGCCAGAGCAGCTCAGTCAACAGCCTAGCAGATGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGGATCATCATATAGGTaGTCTGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCAGACAACCTATATGATGATCC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTTGCAACTGCTCCTTTaGCCTCAACAGCCACTCAGC +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERLQLLL*PQQPLS
Trigger: GCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCAA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGCTCCCGTCGCTTGTaGTACTCCAGCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELCSRRL*YSSWLP
Trigger: AGGCAACCAGCTGGAGTACAACAAGCGACGGGAGCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACATCTGTCCCCACCACCACTGTGTAGGCTTCAAGCACACTGCCTGTAGGATCTCCTGGAACTGCTTCTaGATCTGCAGCTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: NICPHHHCVGFKHTACRISWNCF*ICSSFD
Trigger: ATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGA...GATCCTACAGGCAGTGTGCTTGAAGCCTACACAGTGGTGGTGGGGACAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCCTTTGGTCCAGGATaGCCTCCTGGCCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELSFGPG*PPGQMS
Trigger: GCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCCCTGTGGGTTCCAATaGGAGCCCCTCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELPCGFQ*EPLPLL
Trigger: AAGAAGAGGGAGGGGCTCCAATTGGAACCCACAGGG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 90 bp TCCTTCTGTGTCTGTTTCTTATTCAAGTCCTCTCGAAGCAGGTCCTaGTCTAGGCTGTGCCGAGCCAGTAGCATCTTGCGCTTGTATTGG +
Preference number: 5 (lower is better)
Translates to: SFCVCFLFKSSRSRS*SRLCRASSILRLYW
Trigger: CCAATACAAGCGCAAGATGCTACTGGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAGAGGACTTGAATAAGAAACAGACACAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTTCTCAGGGTCATCCTaGAAGAAGAGCTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERFSGSS*KKSSAT
Trigger: TGTGGCTGAGCTCTTCTTCAAGGATGACCCTGAGAA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTCCCGTACAGCATCCTaGGTCCTCTGGATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELSRTAS*VLWIRS
Trigger: GGACCTAATCCAGAGGACCAAGGATGCTGTACGGGA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGTGGACCCAGCCAAGCTaGAACTCCACATCCACAAGG +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELWTQPS*NSTSTR
Trigger: CCTTGTGGATGTGGAGTTCAAGCTTGGCTGGGTCCA...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGGACCAGACATCCACTTaGCCATCATATTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERDQTST*PSYCPS
Trigger: TGAGGGACAATATGATGGCAAAGTGGATGTCTGGTC...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 90 bp CGCTGCCTCTTCCTGGCCAATAATATTTCTCTCCTGGGATGCCAGTaGTGGGACTCTAATCTCCTTCATCTCCTCAGATATATCCCAATC +
Preference number: 5 (lower is better)
Translates to: RCLFLANNISLLGCQ*WDSNLLHLLRYIPI
Trigger: GATTGGGATATATCTGAGGAGATGAAGGAGATTAGAGTCCCATCACTGGCATCCCAGGAGAGAAATATTATTGGCCAGGAAGAGGCAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGCCTGCCATTTCTCATTaGATTGCTTCCCACTATAGG +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERPAISH*IASHYR
Trigger: CCTATAGTGGGAAGCAATCAAATGAGAAATGGCAGG...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGTACCCACAAAAGAGTaGGCAGGTGCCATGATTGAC +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELVPTKE*AGAMID
Trigger: GTCAATCATGGCACCTGCCAACTCTTTTGTGGGTAC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCTCATTGCATTCATGTaGAACAGTGGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELLIAFM*NSGGFR
Trigger: GCGGAAGCCACCACTGTTCAACATGAATGCAATGAG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp AAAAAGACAAGACGGCACAGGACGTCAGACAGCAATAGGAGAATGGTGAGACTCGCCATTGGGTGCCTCTaGGAACAGTATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KKTRRHRTSDSNRRMVRLAIGCL*EQYLLH
Trigger: ATGAAGAAGATACTGTTCCAAGAGGCACCCAATGGC...GAGTCTCACCATTCTCCTATTGCTGTCTGACGTCCTGTGCCGTCTTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp GTTAGAATAACCAACAGTTTATTAAAAGCTCGCCCTAGGGCTCTGTGCCAGCCCCCTGCCATTTCTCATTaGATTGCTTCCCACTATAGG +
Preference number: 5 (lower is better)
Translates to: VRITNSLLKARPRALCQPPAISH*IASHYR
Trigger: CCTATAGTGGGAAGCAATCAAATGAGAAATGGCAGG...GGGCTGGCACAGAGCCCTAGGGCGAGCTTTTAATAAACTGTTGGTTATTCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS-3UTR CAA 90 bp AACCTAGATCTGGGGCCGGGATTGGACTTGGGAAAACATACTGAGGAAGAAAGGTCTCTATGGATCATGTaGTGTGAGTGTAGATATGCC +
Preference number: 5 (lower is better)
Translates to: NLDLGPGLDLGKHTEEERSLWIM*CECRYA
Trigger: GGCATATCTACACTCACACAACATGATCCATAGAGA...CCTTTCTTCCTCAGTATGTTTTCCCAAGTCCAATCCCGGCCCCAGATCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGGCCATTGGGTGCCTCTaGGAACAGTATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELAIGCL*EQYLLH
Trigger: ATGAAGAAGATACTGTTCCAAGAGGCACCCAATGGC...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS-3UTR CAA 90 bp GTCATGGGAGATAAAGTGCTCAGTGCCCTAAATTTGGGTGGAGAATTGGAACTGCATCTTGCGCTTGTATaGGCGACACTGAAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: VMGDKVLSALNLGGELELHLALV*ATLKFK
Trigger: TTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATG...CAGTTCCAATTCTCCACCCAAATTTAGGGCACTGAGCACTTTATCTCCCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 90 bp AGATATATCCCAATCTTCCTCATTAGCCAGACTCCTATGTTTTTGTaGGCTGGAACTAAAGGTTCCCATTTCTTCCCCCAGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: RYIPIFLISQTPMFL*AGTKGSHFFPQNPL
Trigger: CAGAGGATTCTGGGGGAAGAAATGGGAACCTTTAGTTCCAGCCCACAAAAACATAGGAGTCTGGCTAATGAGGAAGATTGGGATATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp CTGCTGGAACTTCCGCTCCTCCGCCTGAGCAGCCCGTaGCTCCTTCTCACCAATGGCCTGGTGCCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: LLELPLLRLSSP*LLLTNGLVPPG
Trigger: GCCCGGAGGCACCAGGCCATTGGTGAGAAGGAGGCACGGGCTGCTCAGGCGGAGGAGCGGAAGTTCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp CTGGCACTGCAGCAGGTGGGCCGACGTTCTCACCACTaGTGCCCCCTGACGCTGCCCGCCTTAGGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: LALQQVGRRSHH*CPLTLPALGVE
Trigger: CTCAACCCCTAAGGCGGGCAGCGTCAGGGGGCAGCAGTGGTGAGAACGTCGGCCCACCTGCTGCAGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 72 bp CGCTGTGCCTCGAGCTCCCGCTGTAACCGCCCACTGTaGTCCTCACGTTCACCCCTCAGACGGGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: RCASSSRCNRPL*SSRSPLRRDSR
Trigger: CCTGGAGTCCCGTCTGAGGGGTGAACGTGAGGAGCACAGTGGGCGGTTACAGCGGGAGCTCGAGGCACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 72 bp TCGGGAAGCAGAGAGCCCAAGACGGCGTTGGCTGCGTaGCAGCAGCCGAGGGATCCGACTAGGCCGTTCACC +
Preference number: 6 (lower is better)
Translates to: SGSREPKTALAA*QQPRDPTRPFT
Trigger: GGTGAACGGCCTAGTCGGATCCCTCGGCTGCTGCCACGCAGCCAACGCCGTCTTGGGCTCTCTGCTTCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp GGTAGCTGTCGGGAAGCAGAGAGCCCAAGACGGCGTTaGCTGCGTGGCAGCAGCCGAGGGATCCGACTAGGC +
Preference number: 6 (lower is better)
Translates to: GSCREAESPRRR*LRGSSRGIRLG
Trigger: GCCTAGTCGGATCCCTCGGCTGCTGCCACGCAGCCAACGCCGTCTTGGGCTCTCTGCTTCCCGACAGCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp GTGGGAAGCAACACTGGTGCTTCGGCTCAGCGGCCCTaGCACTGCAGCAGGTGGGCCGACGTTCTCACCACT +
Preference number: 6 (lower is better)
Translates to: VGSNTGASAQRP*HCSRWADVLTT
Trigger: AGTGGTGAGAACGTCGGCCCACCTGCTGCAGTGCCAGGGCCGCTGAGCCGAAGCACCAGTGTTGCTTCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 72 bp CCCAGAGCCCCAGTAGCAGGGAGGCCCATGGGTAGCTaGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PRAPVAGRPMGS*PARTLRLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCTCCCTGCTACTGGGGCTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp GCAAGGCTGCTCTTCACTAGGGGTGCCTGTGCTGAGTaGTCCCAGAGCCCCAGTAGCAGGGAGGCCCATGGG +
Preference number: 6 (lower is better)
Translates to: ARLLFTRGACAE*SQSPSSREAHG
Trigger: CCCATGGGCCTCCCTGCTACTGGGGCTCTGGGACCACTCAGCACAGGCACCCCTAGTGAAGAGCAGCCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CAA 72 bp CTGGAGCTGCTGCCGCAGGGCCTGAAACTCTGCCTCTaGGGTCTCATCAAGCCGGAGCGCCTGCGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LELLPQGLKLCL*GLIKPERLRAE
Trigger: CTCAGCTCGCAGGCGCTCCGGCTTGATGAGACCCAAGAGGCAGAGTTTCAGGCCCTGCGGCAGCAGCTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CAA 72 bp CCCATGGGTAGCTGGCCTGCACGTACTTTGAGGCTCTaGGGCTGCTGGCGAACCTGGGCCGCGTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PMGSWPARTLRL*GCWRTWAACFC
Trigger: GCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CAA 90 bp GCAGGGAGGCCCATGGGTAGCTGGCCTGCACGTACTTTGAGGCTCTaGGGCTGCTGGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCT +
Preference number: 6 (lower is better)
Translates to: AGRPMGSWPARTLRL*GCWRTWAACFCRNS
Trigger: AGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp GGTAGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCGTGCTTCTGCCGTAAT +
Preference number: 6 (lower is better)
Translates to: GSWPARTLRLLG*WRTWAACFCRN
Trigger: ATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp CGCAGCAGCCCCGCTTCCTCTTCTGCCTGGCACTGTTaGAACTGCTCCTTTTGCCTCAACAGCCACTCAGCC +
Preference number: 6 (lower is better)
Translates to: RSSPASSSAWHC*NCSFCLNSHSA
Trigger: GGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCAACAGTGCCAGGCAGAAGAGGAAGCGGGGCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp TGGTCCAGGATTGCCTCCTGGCCAGATGAGCAAGGCTaGTCTTCACTAGGGGTGCCTGTGCTGAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: WSRIASWPDEQG*SSLGVPVLSGP
Trigger: GGGACCACTCAGCACAGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp CGGAGCGCCTGCGAGCTGAGCATCTCTGAAATGGACTaGTCATACTGCTCAGCCAGGATCGCCAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: RSACELSISEMD*SYCSARIASLR
Trigger: CCGCAAGCTGGCGATCCTGGCTGAGCAGTATGACCAGTCCATTTCAGAGATGCTCAGCTCGCAGGCGCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 72 bp GCACGTACTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: ARTLRLLGCWRT*AACFCRNSCSR
Trigger: ACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp AGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTaGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCT +
Preference number: 6 (lower is better)
Translates to: SWPARTLRLLGC*RTWAACFCRNS
Trigger: AGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp TGCCCCATGTCAGGCCATTTGAGGCTCTTGGGCTGCTaGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCT +
Preference number: 6 (lower is better)
Translates to: CPMSGHLRLLGC*RTWAACFCRNS
Trigger: AGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATGGCCTGACATGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS GCA 72 bp ACTGGTCAGTGTCCCTGCACGGTGCGTGTAAGGTTCTaGCTCCTGGGAACAGGGTGTGAGCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: TGQCPCTVRVRF*LLGTGCELLFL
Trigger: GAGGAAGAGGAGCTCACACCCTGTTCCCAGGAGGCAGAACCTTACACGCACCGTGCAGGGACACTGACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp TGGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCTTaGTCCCGTCGCTTGTTGTACTCCAGCTGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: WRTWAACFCRNS*SRRLLYSSWLP
Trigger: AGGCAACCAGCTGGAGTACAACAAGCGACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
ENSMUST00000214525.2
CDS GCA 72 bp ATGCTCTCAGCATCGAAGGCCTCGATCTCACGGGCCTaGCGCTCAAGCAAACTCCGGATACGTTCCGAACGG +
Preference number: 6 (lower is better)
Translates to: MLSASKASISRA*RSSKLRIRSER
Trigger: CCGTTCGGAACGTATCCGGAGTTTGCTTGAGCGGCAGGCCCGTGAGATCGAGGCCTTCGATGCTGAGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 72 bp CTCCTCCTCTTCCTCCTCCGGGACTGGAGTCAGAACTaGACCCTGGACCCAGCCAAGCTTGAACTCCACATC +
Preference number: 6 (lower is better)
Translates to: LLLFLLRDWSQN*TLDPAKLELHI
Trigger: GATGTGGAGTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAGTCCCGGAGGAGGAAGAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp TCCCTCTTCTTCCTCCTCCTCTTCCTCCTCCGGGACTaGAGTCAGAACTGGACCCTGGACCCAGCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: SLFFLLLFLLRD*SQNWTLDPAKL
Trigger: AAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAGTCCCGGAGGAGGAAGAGGAGGAGGAAGAAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 72 bp CAGCATCCTTTGGTCCAGGATTGCCTCCTGGCCAGATaGGCAAGGCTGCTCTTCACTAGGGGTGCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: QHPLVQDCLLAR*ARLLFTRGACA
Trigger: AGCACAGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp TGCGAGCTGAGCATCTCTGAAATGGACTGGTCATACTaGTCAGCCAGGATCGCCAGCTTGCGGGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CELSISEMDWSY*SARIASLRVCS
Trigger: GGAGCAGACCCGCAAGCTGGCGATCCTGGCTGAGCAGTATGACCAGTCCATTTCAGAGATGCTCAGCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 72 bp AGGAAGCAGCACTGGGCTGAGGAATGGGTAAGAGGATaGCCCATGTCAGGCCATTTGAGGCTCTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RKQHWAEEWVRG*PMSGHLRLLGC
Trigger: GCAGCCCAAGAGCCTCAAATGGCCTGACATGGGGCATCCTCTTACCCATTCCTCAGCCCAGTGCTGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS CCA 72 bp TCCTTTGATTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCGTGCTTCTGCCGTAATTCTTGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: SFDLRLLGCWRT*AACFCRNSCSR
Trigger: ACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCAAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS CCA 72 bp TCCTCTCCCAGCATCCTTTGGTCCAGGATTGCCTCCTaGCCAGATGAGCAAGGCTGCTCTTCACTAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SSPSILWSRIAS*PDEQGCSSLGV
Trigger: CACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGATGCTGGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CCA 72 bp CTACAGCCCCACAGCCCTGTAGGGCCCGAAAGACCATaGGTGACAGGCGTAGCAAAATCCTCAACCAGAGTC +
Preference number: 6 (lower is better)
Translates to: LQPHSPVGPERP*VTGVAKSSTRV
Trigger: GACTCTGGTTGAGGATTTTGCTACGCCTGTCACCCATGGTCTTTCGGGCCCTACAGGGCTGTGGGGCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS TCA 72 bp CGAGCCAGTAGCATCTTGCGCTTGTATTGGCGACACTaGAGTTCAAAGTACTGGCGCTGCCTCCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RASSILRLYWRH*SSKYWRCLRSS
Trigger: GCTGCTGCGGAGGCAGCGCCAGTACTTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATGCTACTGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS TCA 72 bp CCTCTTGGGTCTCATCAAGCCGGAGCGCCTGCGAGCTaGGCATCTCTGAAATGGACTGGTCATACTGCTCAG +
Preference number: 6 (lower is better)
Translates to: PLGSHQAGAPAS*ASLKWTGHTAQ
Trigger: CTGAGCAGTATGACCAGTCCATTTCAGAGATGCTCAGCTCGCAGGCGCTCCGGCTTGATGAGACCCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS TCA 72 bp CTGGAGTCAGAACTGGACCCTGGACCCAGCCAAGCTTaGACTCCACATCCACAAGGTTCCCACCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LESELDPGPSQA*TPHPQGSHPPS
Trigger: AGAAGGAGGGTGGGAACCTTGTGGATGTGGAGTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp AGCCCCGCTTCCTCTTCTGCCTGGCACTGTTGCAACTaGTCCTTTTGCCTCAACAGCCACTCAGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SPASSSAWHCCN*SFCLNSHSAFS
Trigger: AGAGAAGGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCAACAGTGCCAGGCAGAAGAGGAAGCGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp TTGATCTGCAGCTCCTTTGATTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCGTGCTTCTGCCGTAAT +
Preference number: 6 (lower is better)
Translates to: LICSSFDLRLLG*WRTWAACFCRN
Trigger: ATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCAAAGGAGCTGCAGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS GCA 72 bp GTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTTGTATTaGCGCGTCTGGATCTTACACGTCTCCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: VVSSKCARRALY*RVWILHVSWNC
Trigger: GCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 72 bp ATCTGCAGCTCCTTTGATTTGAGGCTCTTGGGCTGCTaGCGAACCTGGGCCGCGTGCTTCTGCCGTAATTCT +
Preference number: 6 (lower is better)
Translates to: ICSSFDLRLLGC*RTWAACFCRNS
Trigger: AGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCAAAGGAGCTGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS CAA 72 bp TTGGGTGTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTaGTATTGCCGCGTCTGGATCTTACACGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LGVVSSKCARRA*YCRVWILHVSW
Trigger: CCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 72 bp ATGGAGCTGTGGGAAGTGACTGTATGCTCCCCCTCCTaGATCATGGCCATCTCTCTGGATTCAGGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: MELWEVTVCSPS*IMAISLDSGPS
Trigger: AGAAGGCCCTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGGAGCATACAGTCACTTCCCACAGCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp CTTGTGCTGAGCTTTGGGTGTGGTCTCCAGCAAGTGTaGCCGAAGAGCCTTGTATTGCCGCGTCTGGATCTT +
Preference number: 6 (lower is better)
Translates to: LVLSFGCGLQQV*PKSLVLPRLDL
Trigger: AAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACACCCAAAGCTCAGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CCA 72 bp TCAGCCTTCTCTCGTTTGGGTGTGCTAGGGTTCTCCTaGAGCTCCTCTTTCAACTGCTCCTTCCGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SAFSRLGVLGFS*SSSFNCSFRSL
Trigger: CAAGCTGCGGAAGGAGCAGTTGAAAGAGGAGCTCCAGGAGAACCCTAGCACACCCAAACGAGAGAAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CAA 72 bp TGTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTTGTATaGCCGCGTCTGGATCTTACACGTCTCCTGGAACTG +
Preference number: 6 (lower is better)
Translates to: CGLQQVCPKSLV*PRLDLTRLLEL
Trigger: CAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS CAA 90 bp TGCAACTGCTCCTTTTGCCTCAACAGCCACTCAGCCTTCTCTCGTTaGGGTGTGCTAGGGTTCTCCTGGAGCTCCTCTTTCAACTGCTCC +
Preference number: 6 (lower is better)
Translates to: CNCSFCLNSHSAFSR*GVLGFSWSSSFNCS
Trigger: GGAGCAGTTGAAAGAGGAGCTCCAGGAGAACCCTAGCACACCCAAACGAGAGAAGGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CAA 72 bp CGGTACTGCAGGTTATCCAGTTCCCGTACAGCATCCTaGGTCCTCTGGATTAGGTCCATGATGACTGTGGGC +
Preference number: 6 (lower is better)
Translates to: RYCRLSSSRTAS*VLWIRSMMTVG
Trigger: GCCCACAGTCATCATGGACCTAATCCAGAGGACCAAGGATGCTGTACGGGAACTGGATAACCTGCAGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CAA 72 bp TCCTTTTGCCTCAACAGCCACTCAGCCTTCTCTCGTTaGGGTGTGCTAGGGTTCTCCTGGAGCTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SFCLNSHSAFSR*GVLGFSWSSSF
Trigger: GAAAGAGGAGCTCCAGGAGAACCCTAGCACACCCAAACGAGAGAAGGCTGAGTGGCTGTTGAGGCAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CAA 90 bp AGCTTTGGGTGTGGTCTCCAGCAAGTGTGCCCGAAGAGCCTTGTATaGCCGCGTCTGGATCTTACACGTCTCCTGGAACTGCTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: SFGCGLQQVCPKSLV*PRLDLTRLLELLLD
Trigger: ATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCTGGAGACCACACCCAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS TCA 72 bp TGGATCATGTTGTGTGAGTGTAGATATGCCAGGCCCTaGAGAGCCCCATGGGTCACAGCTGCAATCTCTACC +
Preference number: 6 (lower is better)
Translates to: WIMLCECRYARP*RAPWVTAAIST
Trigger: GGTAGAGATTGCAGCTGTGACCCATGGGGCTCTTCAGGGCCTGGCATATCTACACTCACACAACATGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS TCA 72 bp GTCTGTTTCTTATTCAAGTCCTCTCGAAGCAGGTCCTaGTCTAGGCTGTGCCGAGCCAGTAGCATCTTGCGC +
Preference number: 6 (lower is better)
Translates to: VCFLFKSSRSRS*SRLCRASSILR
Trigger: GCGCAAGATGCTACTGGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAGAGGACTTGAATAAGAAACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS TCA 72 bp GCGTCTGGATCTTACACGTCTCCTGGAACTGCTTCTTaGTCTGCAGCTCCTTTGACTGAAGGAAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: ASGSYTSPGTAS*SAAPLTEGRQA
Trigger: TGCCTGCCTTCCTTCAGTCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214525.2
CDS CCA 72 bp AGCAAGTGTGCCCGAAGAGCCTTGTATTGCCGCGTCTaGATCTTACACGTCTCCTGGAACTGCTTCTTGATC +
Preference number: 6 (lower is better)
Translates to: SKCARRALYCRV*ILHVSWNCFLI
Trigger: GATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGCTCTTCGGGCACACTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000214525.2
CDS GCA 72 bp AGAGCCCCATGGGTCACAGCTGCAATCTCTACCTCCTaGAGGGGTTTCTTGTGCACTTCTAGAAGATCAGAA +
Preference number: 6 (lower is better)
Translates to: RAPWVTAAISTS*RGFLCTSRRSE
Trigger: TTCTGATCTTCTAGAAGTGCACAAGAAACCCCTGCAGGAGGTAGAGATTGCAGCTGTGACCCATGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS GCA 72 bp GGTCCTGATCTAGGCTGTGCCGAGCCAGTAGCATCTTaGGCTTGTATTGGCGACACTGAAGTTCAAAGTACT +
Preference number: 6 (lower is better)
Translates to: GPDLGCAEPVAS*ACIGDTEVQST
Trigger: AGTACTTTGAACTTCAGTGTCGCCAATACAAGCGCAAGATGCTACTGGCTCGGCACAGCCTAGATCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071268.11
ENSMUST00000117394.2
CDS CCA 72 bp GCCGCTGCCTCTTCCTGGCCAATAATATTTCTCTCCTaGGATGCCAGTGATGGGACTCTAATCTCCTTCATC +
Preference number: 6 (lower is better)
Translates to: AAASSWPIIFLS*DASDGTLISFI
Trigger: GATGAAGGAGATTAGAGTCCCATCACTGGCATCCCAGGAGAGAAATATTATTGGCCAGGAAGAGGCAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS GCA 72 bp TATTGCCGCGTCTGGATCTTACACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCCTTTGATTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: YCRVWILHVSWN*FLICSSFDLRL
Trigger: GAGCCTCAAATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS CCA 72 bp GCCTTGTATTGCCGCGTCTGGATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGCAGCTCCTTTGATTTG +
Preference number: 6 (lower is better)
Translates to: ALYCRVWILHVS*NCFLICSSFDL
Trigger: CAAATCAAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACGCGGCAATACAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071268.11
CDS CCA 72 bp CCAATCTTCCTCATTAGCCAGACTCCTATGTTTTTGTaGGCTGGAACTAAAGGTTCCCATTTCTTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: PIFLISQTPMFL*AGTKGSHFFPQ
Trigger: CTGGGGGAAGAAATGGGAACCTTTAGTTCCAGCCCACAAAAACATAGGAGTCTGGCTAATGAGGAAGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2
CDS CAA 90 bp CTCAGATATATCCCAATCTTCCTCATTAGCCAGACTCCTATGTTTTaGTGGGCTGGAACTAAAGGTTCCCATTTCTTCCCCCAGAATCCT +
Preference number: 6 (lower is better)
Translates to: LRYIPIFLISQTPMF*WAGTKGSHFFPQNP
Trigger: AGGATTCTGGGGGAAGAAATGGGAACCTTTAGTTCCAGCCCACAAAAACATAGGAGTCTGGCTAATGAGGAAGATTGGGATATATCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000117394.2