Pregenerated sensors for TANK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064289Ensembl transcript IDs: ENSMUST00000078074.9, ENSMUST00000112494.2, ENSMUST00000112495.8, ENSMUST00000112501.9, ENSMUST00000112502.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTGCAATATAGAAAGTAAATGCACAATGCAGGGTGCCATCTACTaGAACATGAACGCCCGGCTGACTAGTAAAAGGACAAGCAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: CCNIESKCTMQGAIY*NMNARLTSKRTSKR Trigger: TCTCTTGCTTGTCCTTTTACTAGTCAGCCGGGCGTTCATGTTTCAGTAGATGGCACCCTGCATTGTGCATTTACTTTCTATATTGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR GCA 90 bp | CAATTTCTTTGCTTTTTCTGCCAAAATATCAATTATCTAACCTTCTaGCCCATGTCTTGTGACAGCTCAACACCAATTCTCTTGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: QFLCFFCQNINYLTF*PMSCDSSTPILLHF Trigger: AAAATGCAAGAGAATTGGTGTTGAGCTGTCACAAGACATGGGGCAGAAGGTTAGATAATTGATATTTTGGCAGAAAAAGCAAAGAAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGAGGGAGAATAACTCGCATTAGAATCCATGCAGTTCACAGCTCCACAGGAGATGTCAACAAGCTGTaGTTGAAGAGGACGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NGGRITRIRIHAVHSSTGDVNKL*LKRTKQ Trigger: CTGCTTCGTCCTCTTCAAGCACAGCTTGTTGACATC...TCCTGTGGAGCTGTGAACTGCATGGATTCTAATGCGAGTTATTCTCCCTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR-3UTR TCA 90 bp | AGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATATCAACAAGCTGTGCTTaGAGAGGACGAAGCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RHPTASLLLLSMLFKKPISTSCA*RGRSRE Trigger: TTCCCTGCTTCGTCCTCTTCAAGCACAGCTTGTTGA...TATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR CAA 90 bp | AATCTCTACTTACGCCCACTACTAAGACATCCTACAGCTTCACTATaGCTTCTTTCCATGCTGTTCAAAAAGCCTATAACTGATAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: NLYLRPLLRHPTASL*LLSMLFKKPITDRN Trigger: ATTCCTATCAGTTATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAAGTAGAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR CCA 72 bp | CTGAATCTGGAAGAAAGGATGGTAGGATTAGATTCATaGGCTATAAAGTCTTTGTGCTTCACAAACAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LNLEERMVGLDS*AIKSLCFTNSK Trigger: TTTACTGTTTGTGAAGCACAAAGACTTTATAGCCCATGAATCTAATCCTACCATCCTTTCTTCCAGATTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| 3UTR TCA 72 bp | AAATATCAATTATCTAACCTTCTGCCCCATGTCTTGTaGCAGCTCAACACCAATTCTCTTGCATTTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: KYQLSNLLPHVL*QLNTNSLAFLK Trigger: CTTTAAAAATGCAAGAGAATTGGTGTTGAGCTGTCACAAGACATGGGGCAGAAGGTTAGATAATTGATATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGGCTTCCAAAAGGGCTaGTGTGGTCCTCGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDGFQKG*CGPRTA Trigger: GGCTGTCCGAGGACCACAGCAGCCCTTTTGGAAGCC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATCCGGCCCAGTCCTCTTaGTGTGACAGCTGTGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDPAQSS*CDSCDA Trigger: TGCGTCACAGCTGTCACACCAAGAGGACTGGGCCGG...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | TCACAAGGAAGCTTTAGCGCAGTCACATTCAAAATTCATGTCCTTGAATACAGACCGGCCCAGTCCTCTTaGTGTGACAGCTGTGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGSFSAVTFKIHVLEYRPAQSS*CDSCDA Trigger: TGCGTCACAGCTGTCACACCAAGAGGACTGGGCCGG...TCTGTATTCAAGGACATGAATTTTGAATGTGACTGCGCTAAAGCTTCCTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATACACTGTCTCAGGTGTaGCAGGAGCAAGGATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDTLSQV*QEQGCS Trigger: CGAGCATCCTTGCTCCTGCCACACCTGAGACAGTGT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR TCA 90 bp | AATGGAGGGAGAATAACTCGCATTAGAATCCATGCAGTTCACAGCTCCACAGGACGTCGCTCTAAGATTTaGGGGGTTTGTTTTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGGRITRIRIHAVHSSTGRRSKI*GVCFVS Trigger: ACTGACAAAACAAACCCCTCAAATCTTAGAGCGACG...TCCTGTGGAGCTGTGAACTGCATGGATTCTAATGCGAGTTATTCTCCCTCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | AATGGAGGGAGAATAACTCGCATTAGAATCCATGCAGTTCACAGCTCCACAGGAGACAGCTGTTCCTGTTaGTCGCGTATTCTTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NGGRITRIRIHAVHSSTGDSCSC*SRILCS Trigger: TGAACAAAGAATACGCGAGCAACAGGAACAGCTGTC...TCCTGTGGAGCTGTGAACTGCATGGATTCTAATGCGAGTTATTCTCCCTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | CTTACGCCCACTACTAAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTTCGGAAGGCTTCATATaGTCTATTGAGTTGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LTPTTKTSYSFTIASFHASEGFI*SIELLT Trigger: GGTGAGCAACTCAATAGAGCATATGAAGCCTTCCGA...AGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATCTGAATCTCTATCCATaGATGCCTGTCGGAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDLNLYP*MPVGRL Trigger: AAGCCTTCCGACAGGCATGCATGGATAGAGATTCAG...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | AGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATATGCAAAACAGTTACCTaGTGTGGTCCTCGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RHPTASLLLLSMLFKKPICKTVT*CGPRTA Trigger: GGCTGTCCGAGGACCACAGCAGGTAACTGTTTTGCA...TATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR CCA 90 bp | TCACAAGGAAGCTTTAGCGCAGTCACATTCAAAATTCATGTCCTTGAATACAGAAACAGTTACCTGCTGTaGTCCTCGGACAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGSFSAVTFKIHVLEYRNSYLL*SSDSLS Trigger: GGAAAGGCTGTCCGAGGACCACAGCAGGTAACTGTT...TCTGTATTCAAGGACATGAATTTTGAATGTGACTGCGCTAAAGCTTCCTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR TCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATCGTCGCTCTAAGATTTaGGGGGTTTGTTTTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDRRSKI*GVCFVS Trigger: ACTGACAAAACAAACCCCTCAAATCTTAGAGCGACG...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR TCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGGTGGGAAAAGCTCTTaGCAGAATTCACACACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDGGKSS*QNSHTR Trigger: TCTAGTGTGTGAATTCTGTCAAGAGCTTTTCCCACC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTCGGAAGGCTTCATATaGTCTATTGAGTTGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDSEGFI*SIELLT Trigger: GGTGAGCAACTCAATAGAGCATATGAAGCCTTCCGA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATATCTCTATCCATGCATaGCTGTCGGAAGGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDISIHA*LSEGFI Trigger: TATGAAGCCTTCCGACAGGCATGCATGGATAGAGAT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGACAGCTGTTCCTGTTaGTCGCGTATTCTTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDDSCSC*SRILCS Trigger: TGAACAAAGAATACGCGAGCAACAGGAACAGCTGTC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATAAGTGTGTATTAAGATaGCGGAGGAAATCCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDKCVLR*RRKSPL Trigger: CAGAGGGGATTTCCTCCGGCATCTTAATACACACTT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR TCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTGTCGTCTCACCTTTaGTTGCTTATCTCTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDLSSHL*LLISQC Trigger: ACACTGAGAGATAAGCAATCAAAGGTGAGACGACAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTCTCAGTCTGCTTTTaGTGTAGCTCTCTTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDFSVCF*CSSLTA Trigger: AGCAGTAAGAGAGCTACAGCAAAAGCAGACTGAGAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078074.9 ENSMUST00000112501.9 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATATATCATCTTTAGCCTaGGGCTTAAACAGCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDISSLA*GLNSAS Trigger: AGAAGCGCTGTTTAAGCCCCAGGCTAAAGATGATAT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGGATGTAATGGATGGTaGGAAAAGCTCTTGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDGCNGW*EKLLTE Trigger: TTCTGTCAAGAGCTTTTCCCACCATCCATTACATCC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTCTGGATGTAATGGATaGTGGGAAAAGCTCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDSGCNG*WEKLLT Trigger: TGTCAAGAGCTTTTCCCACCATCCATTACATCCAGA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR TCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATAAGGTTTTGTATAGCTaGAGTTATGGGGTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDKVLYS*SYGVNS Trigger: GGAATTGACCCCATAACTTCAGCTATACAAAACCTT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGACAACTCAAGAACTGTATTTAGGAGCTTTATTAATGCAAGCGAGTAATCTGAATCTCTATCCATaGATGCCTGTCGGAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LWTTQELYLGALLMQASNLNLYP*MPVGRL Trigger: AAGCCTTCCGACAGGCATGCATGGATAGAGATTCAG...ATTACTCGCTTGCATTAATAAAGCTCCTAAATACAGTTCTTGAGTTGTCCACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR CCA 90 bp | CTTACGCCCACTACTAAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTTTTAACAAAGTTTCCTaGGTTGTCTCTGACTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LTPTTKTSYSFTIASFHAFNKVS*VVSDFH Trigger: ATGGAAGTCAGAGACAACCCAGGAAACTTTGTTAAA...AGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR TCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTCAATTAGGTTTTGTTaGAATGACAGCTGTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDSIRFC*NDSCSC Trigger: ACAGGAACAGCTGTCATTTCAACAAAACCTAATTGA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | CTTACGCCCACTACTAAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTACACTGTGTGTCAGTTaGAATATCTGGTATATTAAG | + |
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Preference number: 4 (lower is better) Translates to: LTPTTKTSYSFTIASFHATLCVS*NIWYIK Trigger: CTTAATATACCAGATATTGCAACTGACACACAGTGT...AGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTTAACAAAGTTTCCTaGGTTGTCTCTGACTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDFNKVS*VVSDFH Trigger: ATGGAAGTCAGAGACAACCCAGGAAACTTTGTTAAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATACTAAGTCAGTGTCTTaGTTAAGAAAAGGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDTKSVS*LRKGFQ Trigger: TTGGAAGCCTTTTCTTAACCAAGACACTGACTTAGT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| 3UTR CAA 72 bp | TTACGCCCACTACTAAGACATCCTACAGCTTCACTATaGCTTCTTTCCATGCTGTTCAAAAAGCCTATAACT | + |
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Preference number: 4 (lower is better) Translates to: LRPLLRHPTASL*LLSMLFKKPIT Trigger: AGTTATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR TCA 90 bp | GCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATAACTGATAGGAATTTGTCGTCTCACCTTTaGTTGCTTATCTCTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASLLLLSMLFKKPITDRNLSSHL*LLISQC Trigger: ACACTGAGAGATAAGCAATCAAAGGTGAGACGACAA...ATTCCTATCAGTTATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTATGCTCTATTGAGTTaGTCACCAATGTTTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDYALLS*SPMFLS Trigger: GGATAAAAACATTGGTGAGCAACTCAATAGAGCATA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR GCA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATACACTGTGTGTCAGTTaGAATATCTGGTATATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRKRSLALQIQNHHREHDTLCVS*NIWYIK Trigger: CTTAATATACCAGATATTGCAACTGACACACAGTGT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
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| CDS-3UTR CCA 90 bp | GCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATAACTGATAGGAATATATCATCTTTAGCCTaGGGCTTAAACAGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLLLSMLFKKPITDRNISSLA*GLNSAS Trigger: AGAAGCGCTGTTTAAGCCCCAGGCTAAAGATGATAT...ATTCCTATCAGTTATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR TCA 90 bp | CTGTGGACAACTCAAGAACTGTATTTAGGAGCTTTATTAATGCAAGCGAGTAATTCAATTAGGTTTTGTTaGAATGACAGCTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWTTQELYLGALLMQASNSIRFC*NDSCSC Trigger: ACAGGAACAGCTGTCATTTCAACAAAACCTAATTGA...ATTACTCGCTTGCATTAATAAAGCTCCTAAATACAGTTCTTGAGTTGTCCACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS-3UTR GCA 90 bp | TCACAAGGAAGCTTTAGCGCAGTCACATTCAAAATTCATGTCCTTGAATACAGATATGCTCTATTGAGTTaGTCACCAATGTTTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: SQGSFSAVTFKIHVLEYRYALLS*SPMFLS Trigger: GGATAAAAACATTGGTGAGCAACTCAATAGAGCATA...TCTGTATTCAAGGACATGAATTTTGAATGTGACTGCGCTAAAGCTTCCTTGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
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| CDS CCA 90 bp | ACAAAGTTTCCTGGGTTGTCTCTGACTTCCATATTAAATCGGTCCTaGCACACTGTCTCAGGTGTGGCAGGAGCAAGGATGCTCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKFPGLSLTSILNRS*HTVSGVAGARMLGA Trigger: GGCCCCGAGCATCCTTGCTCCTGCCACACCTGAGACAGTGTGCCAGGACCGATTTAATATGGAAGTCAGAGACAACCCAGGAAACTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CCA 90 bp | AGGAGCTCTGAGTCTGAATCACTTGGTACCACTAAGTCAGTGTCTTaGTTAAGAAAAGGCTTCCAAAAGGGCTGCTGTGGTCCTCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSSESESLGTTKSVS*LRKGFQKGCCGPRT Trigger: TGTCCGAGGACCACAGCAGCCCTTTTGGAAGCCTTTTCTTAACCAAGACACTGACTTAGTGGTACCAAGTGATTCAGACTCAGAGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTGCGTCAGGCGGGTCTaGAAGTGGGAACGTATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDCVRRV*KWERIY Trigger: GTAAATACGTTCCCACTTCAAGACCCGCCTGACGCA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 90 bp | AGAGTCATTGTCCATAGGCGGAAACTTGACATTGAATTTAGAAAGTaGTTCAAAAGAGGTATCTTCCTCATCCCGGCCCAGTCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVIVHRRKLDIEFRK*FKRGIFLIPAQSSW Trigger: CCAAGAGGACTGGGCCGGGATGAGGAAGATACCTCTTTTGAATCACTTTCTAAATTCAATGTCAAGTTTCCGCCTATGGACAATGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | AAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATTGCGTCAGGCGGGTCTaGAAGTGGGAACGTATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KTSYSFTIASFHAVQKAYCVRRV*KWERIY Trigger: GTAAATACGTTCCCACTTCAAGACCCGCCTGACGCA...ATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS TCA 90 bp | AGAAAGTCTTCTCTATATTATCCCTTTCGTGATGCAGAGGGATGTTaGGACCCTTGGCGGATTCTTTTCCAGAAGAAACTTCTTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKSSLYYPFRDAEGC*DPWRILFQKKLLVV Trigger: GACGACAAGAAGTTTCTTCTGGAAAAGAATCCGCCAAGGGTCTCAACATCCCTCTGCATCACGAAAGGGATAATATAGAGAAGACTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 90 bp | TCTTCTTTAAGGTCCCAGAAAGTCTTCTCTATATTATCCCTTTCGTaGTGCAGAGGGATGTTGAGACCCTTGGCGGATTCTTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLRSQKVFSILSLS*CRGMLRPLADSFPE Trigger: TTCTGGAAAAGAATCCGCCAAGGGTCTCAACATCCCTCTGCATCACGAAAGGGATAATATAGAGAAGACTTTCTGGGACCTTAAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATCTTGTCGTCTCACCTTaGATTGCTTATCTCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDLVVSP*IAYLSV Trigger: CACTGAGAGATAAGCAATCAAAGGTGAGACGACAAG...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CCA 90 bp | ACAGCTGTGACGCACGACATACCTCTATTTATATCATCTTTAGCCTaGGGCTTAAACAGCGCTTCTTGTTTCTCTGTTTTATCAGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: TAVTHDIPLFISSLA*GLNSASCFSVLSVH Trigger: GTGTACTGATAAAACAGAGAAACAAGAAGCGCTGTTTAAGCCCCAGGCTAAAGATGATATAAATAGAGGTATGTCGTGCGTCACAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTGCTCGCGTATTCTTaGTTCATAGTTCTCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDLLAYS*FIVLSL Trigger: CAGACTGAGAACTATGAACAAAGAATACGCGAGCAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078074.9 ENSMUST00000112501.9 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGATCTTTCTGTGCTTTaGCTAGCAAGCAAATCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDDLSVL*LASKSY Trigger: ATAGGATTTGCTTGCTAGCAAAAGCACAGAAAGATC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | CTTACGCCCACTACTAAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTTCCATAGGCGGAAACTaGACATTGAATTTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTPTTKTSYSFTIASFHASIGGN*TLNLES Trigger: ACTTTCTAAATTCAATGTCAAGTTTCCGCCTATGGA...AGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTTAGTAGTGGGCGTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATAGAAAAATAGAGTCATaGTCCATAGGCGGAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDRKIES*SIGGNL Trigger: CAAGTTTCCGCCTATGGACAATGACTCTATTTTTCT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATACAAAGTTTCCTGGGTaGTCTCTGACTTCCATATTA | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDTKFPG*SLTSIL Trigger: TAATATGGAAGTCAGAGACAACCCAGGAAACTTTGT...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTGCTCGCGTATTCTTaGTTCATAGTTCTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDLLAYS*FIVLSL Trigger: AAGACTGAGAACTATGAACAAAGAATACGCGAGCAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112495.8 ENSMUST00000112502.8 |
||
| CDS GCA 90 bp | GCGGATTCTTTTCCAGAAGAAACTTCTTGTCGTCTCACCTTTGATTaGTTATCTCTCAGTGTTCCTAGTTTCACTTTATCATGTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ADSFPEETSCRLTFD*LSLSVPSFTLSCGS Trigger: TGAACCACATGATAAAGTGAAACTAGGAACACTGAGAGATAAGCAATCAAAGGTGAGACGACAAGAAGTTTCTTCTGGAAAAGAATCCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTTTATCCATTCCTCTTaGTCCTGTAGCATCACTATA | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDFIHSS*SCSITI Trigger: TATAGTGATGCTACAGGACAAAGAGGAATGGATAAA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078074.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATCTTAAACAGCGCTTCTaGTTTCTCTGTTTTATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDLKQRF*FLCFIS Trigger: ACTGATAAAACAGAGAAACAAGAAGCGCTGTTTAAG...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATGGCGGAAACTTGACATaGAATTTAGAAAGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDGGNLT*NLESDS Trigger: TGAATCACTTTCTAAATTCAATGTCAAGTTTCCGCC...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGAAAGCGTTCTCTAGCGTTACAAATCCAAAACCACCACAGAGAACATGATTCCATAGGCGGAAACTaGACATTGAATTTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TRKRSLALQIQNHHREHDSIGGN*TLNLES Trigger: ACTTTCTAAATTCAATGTCAAGTTTCCGCCTATGGA...ATCATGTTCTCTGTGGTGGTTTTGGATTTGTAACGCTAGAGAACGCTTTCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTTAGCGCAGTCACATTCAAAATTCATGTCCTTGAATACAGAACTTACATACTTGTCGTCTCACCTTaGATTGCTTATCTCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSAVTFKIHVLEYRTYILVVSP*IAYLSV Trigger: CACTGAGAGATAAGCAATCAAAGGTGAGACGACAAG...TATGTAAGTTCTGTATTCAAGGACATGAATTTTGAATGTGACTGCGCTAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | AAGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATAGAAAAATAGAGTCATaGTCCATAGGCGGAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTSYSFTIASFHAVQKAYRKIES*SIGGNL Trigger: CAAGTTTCCGCCTATGGACAATGACTCTATTTTTCT...ATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | AGACATCCTACAGCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATACTTAAACAGCGCTTCTaGTTTCTCTGTTTTATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RHPTASLLLLSMLFKKPILKQRF*FLCFIS Trigger: ACTGATAAAACAGAGAAACAAGAAGCGCTGTTTAAG...TATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGCTGTAGGATGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCACTATTGCTTCTTTCCATGCTGTTCAAAAAGCCTATAACTGATAGGAATACAAAGTTTCCTGGGTaGTCTCTGACTTCCATATTA | + |
|
Preference number: 5 (lower is better) Translates to: ASLLLLSMLFKKPITDRNTKFPG*SLTSIL Trigger: TAATATGGAAGTCAGAGACAACCCAGGAAACTTTGT...ATTCCTATCAGTTATAGGCTTTTTGAACAGCATGGAAAGAAGCAATAGTGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACAACTCAAGAACTGTATTTAGGAGCTTTATTAATGCAAGCGAGTAATTTGCTCGCGTATTCTTaGTTCATAGTTCTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWTTQELYLGALLMQASNLLAYS*FIVLSL Trigger: AAGACTGAGAACTATGAACAAAGAATACGCGAGCAA...ATTACTCGCTTGCATTAATAAAGCTCCTAAATACAGTTCTTGAGTTGTCCACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACAACTCAAGAACTGTATTTAGGAGCTTTATTAATGCAAGCGAGTAATGGCGGAAACTTGACATaGAATTTAGAAAGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWTTQELYLGALLMQASNGGNLT*NLESDS Trigger: TGAATCACTTTCTAAATTCAATGTCAAGTTTCCGCC...ATTACTCGCTTGCATTAATAAAGCTCCTAAATACAGTTCTTGAGTTGTCCACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112494.2 |
||
| CDS CCA 72 bp | AAAAGAGGTATCTTCCTCATCCCGGCCCAGTCCTCTTaGTGTGACAGCTGTGACGCACGACATACCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: KRGIFLIPAQSS*CDSCDARHTSI Trigger: AATAGAGGTATGTCGTGCGTCACAGCTGTCACACCAAGAGGACTGGGCCGGGATGAGGAAGATACCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 72 bp | AGGTCCCAGAAAGTCTTCTCTATATTATCCCTTTCGTaGTGCAGAGGGATGTTGAGACCCTTGGCGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSQKVFSILSLS*CRGMLRPLADS Trigger: AGAATCCGCCAAGGGTCTCAACATCCCTCTGCATCACGAAAGGGATAATATAGAGAAGACTTTCTGGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 72 bp | TCCCCTCTGGATGTAATGGATGGTGGGAAAAGCTCTTaGCAGAATTCACACACTAGAGGTTTAAGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLDVMDGGKSS*QNSHTRGLRSS Trigger: AGAGCTCCTTAAACCTCTAGTGTGTGAATTCTGTCAAGAGCTTTTCCCACCATCCATTACATCCAGAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078074.9 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 72 bp | CCATGCATGCCTGTCGGAAGGCTTCATATGCTCTATTaGGTTGCTCACCAATGTTTTTATCCATTCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PCMPVGRLHMLY*VAHQCFYPFLF Trigger: AAAGAGGAATGGATAAAAACATTGGTGAGCAACTCAATAGAGCATATGAAGCCTTCCGACAGGCATGCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078074.9 ENSMUST00000112502.8 |
||
| CDS CAA 90 bp | AGGATGCTCGGGGCCTCTGGAGTGCTATGTAGAAAAATAGAGTCATaGTCCATAGGCGGAAACTTGACATTGAATTTAGAAAGTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMLGASGVLCRKIES*SIGGNLTLNLESDS Trigger: TGAATCACTTTCTAAATTCAATGTCAAGTTTCCGCCTATGGACAATGACTCTATTTTTCTACATAGCACTCCAGAGGCCCCGAGCATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS GCA 72 bp | ATCTCTATCCATGCATGCCTGTCGGAAGGCTTCATATaGTCTATTGAGTTGCTCACCAATGTTTTTATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ISIHACLSEGFI*SIELLTNVFIH Trigger: ATGGATAAAAACATTGGTGAGCAACTCAATAGAGCATATGAAGCCTTCCGACAGGCATGCATGGATAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CAA 72 bp | GGGGCCTCTGGAGTGCTATGTAGAAAAATAGAGTCATaGTCCATAGGCGGAAACTTGACATTGAATTTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GASGVLCRKIES*SIGGNLTLNLE Trigger: TTCTAAATTCAATGTCAAGTTTCCGCCTATGGACAATGACTCTATTTTTCTACATAGCACTCCAGAGGCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CAA 90 bp | CCTTGGCGGATTCTTTTCCAGAAGAAACTTCTTGTCGTCTCACCTTaGATTGCTTATCTCTCAGTGTTCCTAGTTTCACTTTATCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWRILFQKKLLVVSP*IAYLSVFLVSLYHV Trigger: CACATGATAAAGTGAAACTAGGAACACTGAGAGATAAGCAATCAAAGGTGAGACGACAAGAAGTTTCTTCTGGAAAAGAATCCGCCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CAA 90 bp | ATATGCTCTATTGAGTTGCTCACCAATGTTTTTATCCATTCCTCTTaGTCCTGTAGCATCACTATAAAGGATGGTAGGAATGCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ICSIELLTNVFIHSS*SCSITIKDGRNASS Trigger: AGAGCTGGCATTCCTACCATCCTTTATAGTGATGCTACAGGACAAAGAGGAATGGATAAAAACATTGGTGAGCAACTCAATAGAGCATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078074.9 ENSMUST00000112502.8 |
||
| CDS CAA 90 bp | ACCTCTATTTATATCATCTTTAGCCTGGGGCTTAAACAGCGCTTCTaGTTTCTCTGTTTTATCAGTACACTGTATAGGCACAGAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: TSIYIIFSLGLKQRF*FLCFISTLYRHRTL Trigger: CAGTGTTCTGTGCCTATACAGTGTACTGATAAAACAGAGAAACAAGAAGCGCTGTTTAAGCCCCAGGCTAAAGATGATATAAATAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS CCA 72 bp | ACGCACGACATACCTCTATTTATATCATCTTTAGCCTaGGGCTTAAACAGCGCTTCTTGTTTCTCTGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: THDIPLFISSLA*GLNSASCFSVL Trigger: TAAAACAGAGAAACAAGAAGCGCTGTTTAAGCCCCAGGCTAAAGATGATATAAATAGAGGTATGTCGTGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS GCA 72 bp | TTTCCAGAAGAAACTTCTTGTCGTCTCACCTTTGATTaGTTATCTCTCAGTGTTCCTAGTTTCACTTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: FPEETSCRLTFD*LSLSVPSFTLS Trigger: TGATAAAGTGAAACTAGGAACACTGAGAGATAAGCAATCAAAGGTGAGACGACAAGAAGTTTCTTCTGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||
| CDS TCA 72 bp | TCAGTTGCAATATCTGGTATATTAAGTTTGCTTAAGTaGTCTTTCTGTGCTTTTGCTAGCAAGCAAATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVAISGILSLLK*SFCAFASKQIL Trigger: TAGGATTTGCTTGCTAGCAAAAGCACAGAAAGATCACTTAAGCAAACTTAATATACCAGATATTGCAACTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078074.9 ENSMUST00000112494.2 ENSMUST00000112495.8 ENSMUST00000112501.9 ENSMUST00000112502.8 |
||