RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TANC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035168

Ensembl transcript IDs: ENSMUST00000037526.11, ENSMUST00000112568.8, ENSMUST00000139863.3

Found 803 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCAAGGCAGAGAGCCACGAGAGGTGTCCCTGCCTTCTTACCCGCTaGGCAATGAATGCCAACCCACTTGGAGTAATGGTTTTTATTCCA +
Preference number: 1 (lower is better)
Translates to: IKAESHERCPCLLTR*AMNANPLGVMVFIP
Trigger: TGGAATAAAAACCATTACTCCAAGTGGGTTGGCATTCATTGCTCAGCGGGTAAGAAGGCAGGGACACCTCTCGTGGCTCTCTGCCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR CCA 90 bp CCGTCACTGTCCAGAACACTTTCGGAACCAGTTAGAGCTAATTTGTaGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTTGCACAACTCT +
Preference number: 1 (lower is better)
Translates to: PSLSRTLSEPVRANL*PSLRVLLLVLLHNS
Trigger: AGAGTTGTGCAAAAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTCCGAAAGTGTTCTGGACAGTGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CCA 90 bp GTGTCCCTGCCTTCTTACCCGCTGAGCAATGAATGCCAACCCACTTaGAGTAATGGTTTTTATTCCATGTGGAAAAAGTACAGTAGTTGT +
Preference number: 1 (lower is better)
Translates to: VSLPSYPLSNECQPT*SNGFYSMWKKYSSC
Trigger: ACAACTACTGTACTTTTTCCACATGGAATAAAAACCATTACTCCAAGTGGGTTGGCATTCATTGCTCAGCGGGTAAGAAGGCAGGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAGCGTACAGAGAACATaGAGAGAGATGGCGGGGTTC +
Preference number: 2 (lower is better)
Translates to: SAIAGILLQAVITHRSVRSVQRT*REMAGF
Trigger: GAACCCCGCCATCTCTCTGCATGTTCTCTGTACGCT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCACGAGCCAACAGACTaGCTCCAGATTCTACACAGG +
Preference number: 2 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPHEPTD*LQILHR
Trigger: CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTGCACAACTCTGACCTaGACACCAATCCAAATTCTA +
Preference number: 2 (lower is better)
Translates to: QCGNQHDGAYREHAERWRCTTLT*TPIQIL
Trigger: TAGAATTTGGATTGGTGTCCAGGTCAGAGTTGTGCA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGTTAGAGCTAATTTGTaGCCGTCACTAAGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: QCGNQHDGAYREHAERWRVRANL*PSLRVL
Trigger: AAGCACTCTTAGTGACGGCCACAAATTAGCTCTAAC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGAGAACGGCATCAGTTaGTGTCTTCTTGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPENGIS*CLLGSL
Trigger: AAGGCTGCCAAGAAGACATCAACTGATGCCGTTCTC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCACGAGCCAACAGACTaGCTCCAGATTCTACACAGG +
Preference number: 2 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFHEPTD*LQILHR
Trigger: CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAGCGTACAGAGAACATaGAGAGAGATGGCGGGGTTC +
Preference number: 2 (lower is better)
Translates to: AAARFLFVQNLNDVHRSISVQRT*REMAGF
Trigger: GAACCCCGCCATCTCTCTGCATGTTCTCTGTACGCT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGAGAACGGCATCAGTTaGTGTCTTCTTGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIENGIS*CLLGSL
Trigger: AAGGCTGCCAAGAAGACATCAACTGATGCCGTTCTC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGTTAGAGCTAATTTGTaGCCGTCACTAAGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPVRANL*PSLRVL
Trigger: AAGCACTCTTAGTGACGGCCACAAATTAGCTCTAAC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGAGATAAAGTGCCATTaGGGGTATACTGTTACAAGC +
Preference number: 2 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKEIKCH*GYTVTS
Trigger: GCTTGTAACAGTATACCCGCAATGGCACTTTATCTC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGATCCACCCAAGAGGTaGAAAATATGGCTAACATGT +
Preference number: 2 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFDPPKR*KIWLTC
Trigger: ACATGTTAGCCATATTTTCCACCTCTTGGGTGGATC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGATCCACCCAAGAGGTaGAAAATATGGCTAACATGT +
Preference number: 2 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLDPPKR*KIWLTC
Trigger: ACATGTTAGCCATATTTTCCACCTCTTGGGTGGATC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGTTTTAATATGTCAATaGCATCAGATCCACCCAAGA +
Preference number: 2 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFVLICQ*HQIHPR
Trigger: TCTTGGGTGGATCTGATGCCATTGACATATTAAAAC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGTTTTAATATGTCAATaGCATCAGATCCACCCAAGA +
Preference number: 2 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIVLICQ*HQIHPR
Trigger: TCTTGGGTGGATCTGATGCCATTGACATATTAAAAC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAGAAATCACTCAGGTTaGGATTTTTACACACATGTA +
Preference number: 2 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIRNHSG*DFYTHV
Trigger: TACATGTGTGTAAAAATCGCAACCTGAGTGATTTCT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CAA 90 bp AGGTGTTTGATCCTCTCGAGGAACCAACAAGATACTTGGCTGCGCTaGTATTTTGCAGATAAAAGTCACATTTATATCCAGCTAGAAATC +
Preference number: 2 (lower is better)
Translates to: RCLILSRNQQDTWLR*YFADKSHIYIQLEI
Trigger: GATTTCTAGCTGGATATAAATGTGACTTTTATCTGCAAAATACAAGCGCAGCCAAGTATCTTGTTGGTTCCTCGAGAGGATCAAACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGATAAGCCATAGTAACTaGAGCAGAACTCAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: KIMRLEYFGISRSSHLILISHSN*SRTQRE
Trigger: CTCTCTCTGAGTTCTGCTCCAGTTACTATGGCTTAT...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR GCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGTTGGTGTATTCAAAGTaGTTTTTACTCCTTAGGGTG +
Preference number: 2 (lower is better)
Translates to: KIMRLEYFGISRSSHLILLVYSK*FLLLRV
Trigger: CACCCTAAGGAGTAAAAAGCACTTTGAATACACCAA...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR TCA 72 bp CACGGTGCACTGGCGGTTACAGGGTACAAGTATCTGTaGCCAGCGAGACCCATTAGTCCACACTGCTCGTCC +
Preference number: 3 (lower is better)
Translates to: HGALAVTGYKYL*PARPISPHCSS
Trigger: GGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACTTGTACCCTGTAACCGCCAGTGCACCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR TCA 72 bp AAGACACTGCAAATGTGCTGGAAGACGCAGCTGTCCTaGGAGGGCACGGTGCACTGGCGGTTACAGGGTACA +
Preference number: 3 (lower is better)
Translates to: KTLQMCWKTQLS*EGTVHWRLQGT
Trigger: TGTACCCTGTAACCGCCAGTGCACCGTGCCCTCTCAGGACAGCTGCGTCTTCCAGCACATTTGCAGTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGAGGACATTAGAGGCTaGTTTTGGGGACCGTCACTG +
Preference number: 3 (lower is better)
Translates to: QCGNQHDGAYREHAERWREDIRG*FWGPSL
Trigger: CAGTGACGGTCCCCAAAACAAGCCTCTAATGTCCTC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR TCA 72 bp GCCGTGATAACGCATCGTTCAGTGCGGCAACCAGCATaGTGGAGCGTACAGAGAACATGCAGAGAGATGGCG +
Preference number: 3 (lower is better)
Translates to: AVITHRSVRQPA*WSVQRTCREMA
Trigger: CGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTGAACGATGCGTTATCACGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR TCA 72 bp GAGAGCCACGAGAGGTGTCCCTGCCTTCTTACCCGCTaGGCAATGAATGCCAACCCACTTGGAGTAATGGTT +
Preference number: 3 (lower is better)
Translates to: ESHERCPCLLTR*AMNANPLGVMV
Trigger: AACCATTACTCCAAGTGGGTTGGCATTCATTGCTCAGCGGGTAAGAAGGCAGGGACACCTCTCGTGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTCAGTTGATGTCTTCTaGGCAGCCTTTAAATCGCCA +
Preference number: 3 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSVDVF*AAFKSP
Trigger: TGGCGATTTAAAGGCTGCCAAGAAGACATCAACTGA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACTTCTCTTGGTACTTTaGCACAACTCTGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: GLCKEIKTATQTSRVLSELLLVL*HNSDLD
Trigger: GTCCAGGTCAGAGTTGTGCAAAAGTACCAAGAGAAG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR TCA 72 bp ACAAAGCCCTCTGCACACAGGAACAGACACACTAAATaGCGCCGCGGCAAGGTTCCTTTTCGTACAAAACCT +
Preference number: 3 (lower is better)
Translates to: TKPSAHRNRHTK*RRGKVPFRTKP
Trigger: AGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCATTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR GCA 72 bp CTCAGAGGTGTCCATACACAGGAGATAAAGTGCCATTaGGGGTATACTGTTACAAGCCGTGATAACGCATCG +
Preference number: 3 (lower is better)
Translates to: LRGVHTQEIKCH*GYTVTSRDNAS
Trigger: CGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR GCA 72 bp GAGGTGTCCCTGCCTTCTTACCCGCTGAGCAATGAATaGCAACCCACTTGGAGTAATGGTTTTTATTCCATG +
Preference number: 3 (lower is better)
Translates to: EVSLPSYPLSNE*QPTWSNGFYSM
Trigger: CATGGAATAAAAACCATTACTCCAAGTGGGTTGGCATTCATTGCTCAGCGGGTAAGAAGGCAGGGACACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAGAGAACGGCATCAGTaGATGTCTTCTTGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIRERHQ*MSSWQP
Trigger: AGGCTGCCAAGAAGACATCAACTGATGCCGTTCTCT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGAGGACATTAGAGGCTaGTTTTGGGGACCGTCACTG +
Preference number: 3 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGEDIRG*FWGPSL
Trigger: CAGTGACGGTCCCCAAAACAAGCCTCTAATGTCCTC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGGCTGCGCTTGTATTTaGCAGATAAAAGTCACATTT +
Preference number: 3 (lower is better)
Translates to: SAIAGILLQAVITHRSVRGCACI*QIKVTF
Trigger: AAATGTGACTTTTATCTGCAAAATACAAGCGCAGCC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGGCTGCGCTTGTATTTaGCAGATAAAAGTCACATTT +
Preference number: 3 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEGCACI*QIKVTF
Trigger: AAATGTGACTTTTATCTGCAAAATACAAGCGCAGCC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCTAAGAGTGCTTCTCTaGGTACTTTTGCACAACTCT +
Preference number: 3 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPLRVLL*VLLHNS
Trigger: AGAGTTGTGCAAAAGTACCAAGAGAAGCACTCTTAG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR TCA 72 bp AATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTaGACACTTTCCCTAGAGGACATTAGAGGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: NQNCHPDLKGPV*TLSLEDIRGLF
Trigger: AAACAAGCCTCTAATGTCCTCTAGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR TCA 72 bp TGTTGGTGTATTCAAAGTGCTTTTTACTCCTTAGGGTaGCAAATCAAGGCAGAGAGCCACGAGAGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: CWCIQSAFYSLG*QIKAESHERCP
Trigger: GGGACACCTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGAATACACCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCTAAGAGTGCTTCTCTaGGTACTTTTGCACAACTCT +
Preference number: 3 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLRVLL*VLLHNS
Trigger: AGAGTTGTGCAAAAGTACCAAGAGAAGCACTCTTAG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGGCTGCGCTTGTATTTaGCAGATAAAAGTCACATTT +
Preference number: 3 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKGCACI*QIKVTF
Trigger: AAATGTGACTTTTATCTGCAAAATACAAGCGCAGCC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CCA 72 bp TCCAGAACACTTTCGGAACCAGTTAGAGCTAATTTGTaGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTTG +
Preference number: 3 (lower is better)
Translates to: SRTLSEPVRANL*PSLRVLLLVLL
Trigger: CAAAAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTCCGAAAGTGTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCTAAGAGTGCTTCTCTaGGTACTTTTGCACAACTCT +
Preference number: 3 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSLRVLL*VLLHNS
Trigger: AGAGTTGTGCAAAAGTACCAAGAGAAGCACTCTTAG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR-3UTR CAA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGCTTCTCTTGGTACTTTaGCACAACTCTGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: KIMRLEYFGISRSSHLILLLLVL*HNSDLD
Trigger: GTCCAGGTCAGAGTTGTGCAAAAGTACCAAGAGAAG...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR GCA 72 bp AAGTCACATTTATATCCAGCTAGAAATCACTCAGGTTaGGATTTTTACACACATGTAAGGACAGGTTTGACT +
Preference number: 3 (lower is better)
Translates to: KSHLYPARNHSG*DFYTHVRTGLT
Trigger: AGTCAAACCTGTCCTTACATGTGTGTAAAAATCGCAACCTGAGTGATTTCTAGCTGGATATAAATGTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGCTGGAGGCTCTGGCTaGCGCCCAGCCGATCCCCGA +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRAGGSG*RPADPR
Trigger: TCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCCGAGCTGTGGCCCATaGTGGCGGCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRPSCGP*WRRLSV
Trigger: CACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAGCTGGCACTCTTTATaGCCAGGTGGCCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSWHSL*PGGPAG
Trigger: TCCAGCGGGGCCACCTGGTCATAAAGAGTGCCAGCT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGTGGCCGGCAGCAGCTaGGTAGCACAGTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRVAGSS*VAQCVH
Trigger: ATGAACGCACTGTGCTACGCAGCTGCTGCCGGCCAC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGACTGTGGCCCCTCAGTaGGCTGTGGACGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRTVAPQ*AVDECT
Trigger: TGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGGCGGCGGCTGTCAGTaGCTGCTGCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRGGGCQ*LLQGLA
Trigger: AGCCAAGCCCTGCAGCAGGCACTGACAGCCGCCGCC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGGTGGCCAAGCTCCATaGTCTGCTGGCGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRGGQAP*SAGGSA
Trigger: AGCTGAACCGCCAGCAGACCATGGAGCTTGGCCACC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGCGGCGGCTGTCAGTaGCTGCTGCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGGGCQ*LLQGLA
Trigger: AGCCAAGCCCTGCAGCAGGCACTGACAGCCGCCGCC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAAGCTGTGGCCCATGCTaGCGGCGGCTGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSESCGPC*RRLSVP
Trigger: AGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGCTGGAGGCTCTGGCTaGCGCCCAGCCGATCCCCGA +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPAGGSG*RPADPR
Trigger: TCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACTCATGCGGCTTCCGTaGCAGCTCAGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSELMRLP*QLSATS
Trigger: GCTGGTGGCACTGAGCTGTCACGGAAGCCGCATGAG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAAGTCCTCCCAGCCCTaGTCGCCTTGGATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRKSSQP*SPWMWP
Trigger: CGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAAAGTCCTCCCAGCCCTaGTCGCCTTGGATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEKSSQP*SPWMWP
Trigger: CGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGACGGGTGGCAGAACATaGGGGTTTTGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRTGGRT*GFCPSS
Trigger: AGAGGAGGGACAAAACCCGCATGTTCTGCCACCCGT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCCGATCCACAGAGCCTaGAGATGGCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRPIHRA*RWLEET
Trigger: AGTCTCCTCAAGCCATCTGCAGGCTCTGTGGATCGG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGGCGGCGGCTGTCAGTaGCTGCTGCAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKGGGCQ*LLQGLA
Trigger: AGCCAAGCCCTGCAGCAGGCACTGACAGCCGCCGCC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCCGAGCTGTGGCCCATaGTGGCGGCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPPSCGP*WRRLSV
Trigger: CACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCTCAGGGTGCCAGGCTaGGGAGGGCCTGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSILRVPG*GGPADH
Trigger: GTGGTCGGCAGGCCCTCCCCAGCCTGGCACCCTGAG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATGGACGACCGAGCTGTaGCCCATGCTGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKWTTEL*PMLAAA
Trigger: AGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCGGACAACCTGCCAATaGCCTTGGCGGGCGGCACAA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRRTTCQ*PWRAAQ
Trigger: TTGTGCCGCCCGCCAAGGCCATTGGCAGGTTGTCCG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGGGCGCATCCCACTGTaGTCCACATGTTCTATCACG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRGRIPL*STCSIT
Trigger: CGTGATAGAACATGTGGACCACAGTGGGATGCGCCC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCATTATCCGAGTCATTaGCTGGAGCTGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRHYPSH*LELVGD
Trigger: GTCCCCCACCAGCTCCAGCCAATGACTCGGATAATG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGCTGGAGGCTCTGGCTaGCGCCCAGCCGATCCCCGA +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIAGGSG*RPADPR
Trigger: TCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCGGACCATCTCCGGCTaGGGGTTCCGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRRTISG*GFRLGQ
Trigger: CTGCCCAAGGCGGAACCCTCAGCCGGAGATGGTCCG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTGGGCCGTGGCATTATaGGCGAGCCAGAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRWAVAL*ASQSSE
Trigger: CTCAGAGCTCTGGCTCGCTCATAATGCCACGGCCCA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTCGCTTTGGTTTTGCTaGAGTGAGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSLWFC*SEVAPV
Trigger: CACAGGAGCCACCTCACTTCAGCAAAACCAAAGCGA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAAGTCCTCCCAGCCCTaGTCGCCTTGGATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPKSSQP*SPWMWP
Trigger: CGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGCTGTCAGTGCCTGCTaGAGGGCTTGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRAVSAC*RAWLFL
Trigger: GAGGAAGAGCCAAGCCCTGCAGCAGGCACTGACAGC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCAGTGCCGCTCTCACTaGGCTGCAGCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPQCRSH*AAAGGS
Trigger: AGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCATTGTGGACACCCATaGTCAGGGGAGGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRHCGHP*SGEELN
Trigger: GTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACAGCCCTGCTCGCCTTaGATGTGGCCGGCGTTGATA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEQPCSP*MWPALI
Trigger: TATCAACGCCGGCCACATCCAAGGCGAGCAGGGCTG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTCTCTGAAGGACGGGTaGCAGAACATGCGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSLKDG*QNMRVL
Trigger: CAAAACCCGCATGTTCTGCCACCCGTCCTTCAGAGA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGAGCGTGTCCGTTCCTaGGCTCACACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEERVRS*AHTGRL
Trigger: CAGCCTTCCTGTGTGAGCCCAGGAACGGACACGCTC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCTCAGGGTGCCAGGCTaGGGAGGGCCTGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSLRVPG*GGPADH
Trigger: GTGGTCGGCAGGCCCTCCCCAGCCTGGCACCCTGAG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAGCTGTGGCCCATGCTaGCGGCGGCTGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSCGPC*RRLSVP
Trigger: AGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTATTCCCAGCAAGGACTaGACGACCGAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFIPSKD*TTELWP
Trigger: GGGCCACAGCTCGGTCGTCCAGTCCTTGCTGGGAAT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCGGACAACCTGCCAATaGCCTTGGCGGGCGGCACAA +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPRTTCQ*PWRAAQ
Trigger: TTGTGCCGCCCGCCAAGGCCATTGGCAGGTTGTCCG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCAGAGGGCTGGGATTTaGCACTTGTTCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRQRAGI*HLFSSS
Trigger: GCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGTGTGGAACAAGGGCTaGTGCCTTGACTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRVWNKG*CLDSGL
Trigger: CAGCCCTGAGTCAAGGCATCAGCCCTTGTTCCACAC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCGGACCATCTCCGGCTaGGGGTTCCGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLRTISG*GFRLGQ
Trigger: CTGCCCAAGGCGGAACCCTCAGCCGGAGATGGTCCG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCTCATGCGGCTTCCGTaGCAGCTCAGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLMRLP*QLSATS
Trigger: GCTGGTGGCACTGAGCTGTCACGGAAGCCGCATGAG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGACACCAGCCACTCTCTaGAGGACGGGTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRTPATL*RTGGRT
Trigger: TGTTCTGCCACCCGTCCTTCAGAGAGTGGCTGGTGT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGACGTGTCGGTGCCGTTaGCTTCGATTTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRTCRCR*LRFHVP
Trigger: AGGAACATGAAATCGAAGTCAACGGCACCGACACGT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAGCCCAGCTCAATGCTaGCAGGCCCTCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRSPAQC*QALFVQ
Trigger: CTGGACAAAGAGGGCCTGTCAGCATTGAGCTGGGCT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTGGACCACTGCCCTGTaGCCCTTCAGACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPWTTAL*PFRQAQ
Trigger: CTGGGCTTGTCTGAAGGGTCACAGGGCAGTGGTCCA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTCTCTCAGGGACTTGCTaGTTCCTGCCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFLSGTC*FLPCSV
Trigger: CACAGAGCAGGGCAGGAATCAGCAAGTCCCTGAGAG...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCTCTCAGGGACTTGCTaGTTCCTGCCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRLSGTC*FLPCSV
Trigger: CACAGAGCAGGGCAGGAATCAGCAAGTCCCTGAGAG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCACACAGGAAGGCTGTaGTTTCGCCATCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRHTGRL*FRHPLS
Trigger: GGAGAGCGGATGGCGAAAGCACAGCCTTCCTGTGTG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCCGAGCTGTGGCCCATaGTGGCGGCGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLPSCGP*WRRLSV
Trigger: CACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAGAGCTGCCAGGAACTaGCTGCTGTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRRAARN*LLFLFA
Trigger: AGCAAAAAGGAACAGCAGGCAGTTCCTGGCAGCTCT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCAGGTCAGCCAGAGCTaGCAGGAACTGCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRQVSQS*QELPAV
Trigger: AACAGCAGGCAGTTCCTGGCAGCTCTGGCTGACCTG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTCCTCTGGAGTTGCTTaGACTCTTCTTCAACACGGG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSSGVA*TLLQHG
Trigger: CCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTTGCTGAGGATGTCCTaGCTGCTGTGGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRLLRMS*LLWTLC
Trigger: GCACAGGGTCCACAGCAGCCAGGACATCCTCAGCAA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGTGGCCAAGCTCCATaGTCTGCTGGCGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGGQAP*SAGGSA
Trigger: AGCTGAACCGCCAGCAGACCATGGAGCTTGGCCACC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTGGACGACCGAGCTGTaGCCCATGCTGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLWTTEL*PMLAAA
Trigger: AGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTACCTGCCAATGGCCTTaGCGGGCGGCACAAAACAGA +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFTCQWP*RAAQNR
Trigger: TCTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTTTCCGCAAGGCATACTaGTACCTCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFFRKAY*YLWAAS
Trigger: GGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAA...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATTCCGCAAGGCATACTaGTACCTCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEFRKAY*YLWAAS
Trigger: GGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTATCCGAGTCATTGGCTaGAGCTGGTGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPIRVIG*SWWGTL
Trigger: CAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGAT...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCGAGAGTCTGGTCCTTaGACCTTGAATCCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRRESGP*TLNPSE
Trigger: TTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGTCTGATCCGAGAGTCTaGTCCTTGGACCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRSDPRV*SLDLES
Trigger: GGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGA...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATGGCTGCCGTCTTGCTaGCACAGCTATTCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEWLPSC*HSYSRS
Trigger: CGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRPGQSN*CPKRSI
Trigger: AATGCTCCTCTTCGGACATCAATTAGATTGCCCTGG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTCAGGGAGATGTTGCTaGGGATGTCCTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRSGRCC*GCPGCC
Trigger: ACAGCAGCCAGGACATCCTCAGCAACATCTCCCTGA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTCTTCATGGCCAAGGTaGGACTGGACGCACAGGATG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRSSWPR*DWTHRM
Trigger: CATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATGGACCACTGCCCTGTaGCCCTTCAGACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKWTTAL*PFRQAQ
Trigger: CTGGGCTTGTCTGAAGGGTCACAGGGCAGTGGTCCA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGGGCCAGGAGCCTCTTaGTTTCCTGATTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRGPGAS*FPDCWD
Trigger: GTCCCAACAATCAGGAAATCAAGAGGCTCCTGGCCC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAAACCAGTTCCTGCAGTaGAGGGACCGGTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSENQFLQ*RDRFPL
Trigger: TAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGCTCAGGGGAGGAACTaGACACGGTTTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPAQGRN*TRFGLA
Trigger: AGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGGGACTTTTGCTGGCTaGCGTCTTGCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEGTFAG*RLADTA
Trigger: AGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGGGGCGGCGTCGGCCTTaGCATTCAGGGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPREGRRRP*HSGRCC
Trigger: GCAACATCTCCCTGAATGGCAAGGCCGACGCCGCCC...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCACCAAGCTCCATGGTCTaGTGGCGGTTCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPPSSMV*WRFSLL
Trigger: GAGCAAGCTGAACCGCCAGCAGACCATGGAGCTTGG...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGCTGTCAGTGCCTGCTaGAGGGCTTGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKAVSAC*RAWLFL
Trigger: GAGGAAGAGCCAAGCCCTGCAGCAGGCACTGACAGC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGCTGTCAGTGCCTGCTaGAGGGCTTGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPAVSAC*RAWLFL
Trigger: GAGGAAGAGCCAAGCCCTGCAGCAGGCACTGACAGC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGCGGCTGTCAGTGCCTaGTGCAGGGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIAAVSA*CRAWLF
Trigger: GAAGAGCCAAGCCCTGCAGCAGGCACTGACAGCCGC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAAGTTTCACAGCCTCTTaGAGGTCAGCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSESFTAS*RSARAA
Trigger: GGCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGGTGGGGGACCCTGCTaGTTTTGCTGCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPGGGPC*FCCWFL
Trigger: GAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGGTGGGGGACCCTGCTaGTTTTGCTGCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKGGGPC*FCCWFL
Trigger: GAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGACTTGCTGATTCCTaGCCTGCTCTGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGLADS*PALWGC
Trigger: GCATCCCCACAGAGCAGGGCAGGAATCAGCAAGTCC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGCCACAACCAGTTCCTaGAGTGAAGGGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPATTSS*SEGTGS
Trigger: GGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGCCACAACCAGTTCCTaGAGTGAAGGGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPATTSS*SEGTGS
Trigger: GGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCAGTGCCGCTCTCACTaGGCTGCAGCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIQCRSH*AAAGGS
Trigger: AGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAAGACTGCAGGCCAGCTaGAGTGGCTGTGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSERLQAS*SGCVCQ
Trigger: CTGACAAACACAGCCACTGCAGCTGGCCTGCAGTCT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAGACTGCAGGCCAGCTaGAGTGGCTGTGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRRLQAS*SGCVCQ
Trigger: CTGACAAACACAGCCACTGCAGCTGGCCTGCAGTCT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCAATGGTTATGTGTGTaGCGCTCGGGATCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRQWLCV*RSGSPL
Trigger: GAGAGGGGATCCCGAGCGCCACACACATAACCATTG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAGGGGCTGTCGGTGCTaGGAGAGGCAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIRGCRC*ERQCCL
Trigger: CAAGCAGCACTGCCTCTCCCAGCACCGACAGCCCCT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTCTGCTCATCCGTCATaGGGTGGAGGGACGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPSAHPS*GGGTQE
Trigger: CTCTTGCGTCCCTCCACCCCATGACGGATGAGCAGA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAGCTCCATGGTCTGCTaGCGGTTCAGCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPSSMVC*RFSLLS
Trigger: GGAGAGCAAGCTGAACCGCCAGCAGACCATGGAGCT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTCAGGGTGCCAGGCTaGGGAGGGCCTGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLRVPG*GGPADH
Trigger: GTGGTCGGCAGGCCCTCCCCAGCCTGGCACCCTGAG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAGCTGTGGCCCATGCTaGCGGCGGCTGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSCGPC*RRLSVP
Trigger: AGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGAACCCCTCTCCTGTTaGCCCGAGACACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFEPLSC*PETRQL
Trigger: GAGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAACCTGCCAATGGCCTTaGCGGGCGGCACAAAACAGA +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPTCQWP*RAAQNR
Trigger: TCTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAATCCGAGTCATTGGCTaGAGCTGGTGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKIRVIG*SWWGTL
Trigger: CAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGAT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAACAGACGGTGGTGGCTaGGATCTGGGAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKTDGGG*DLGVGE
Trigger: TTCCCCGACTCCCAGATCCCAGCCACCACCGTCTGT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACAAGGGCTGATGCCTTaGCTCAGGGCTGTGCACATG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKQGLMP*LRAVHM
Trigger: CATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCAAGGGCTGATGCCTTaGCTCAGGGCTGTGCACATG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPQGLMP*LRAVHM
Trigger: CATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGTGTGGAACAAGGGCTaGTGCCTTGACTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPVWNKG*CLDSGL
Trigger: CAGCCCTGAGTCAAGGCATCAGCCCTTGTTCCACAC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTGGCTGCCGTCTTGCTaGCACAGCTATTCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPWLPSC*HSYSRS
Trigger: CGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCGGACCATCTCCGGCTaGGGGTTCCGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSRTISG*GFRLGQ
Trigger: CTGCCCAAGGCGGAACCCTCAGCCGGAGATGGTCCG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGGGCCGTGGCATTATaGGCGAGCCAGAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFWAVAL*ASQSSE
Trigger: CTCAGAGCTCTGGCTCGCTCATAATGCCACGGCCCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGACTTGTCGCTGCAACTaGGTTGGGCCGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRTCRCN*VGPWHY
Trigger: ATAATGCCACGGCCCAACTCAGTTGCAGCGACAAGT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGTACCAGGAAGGTCCTaGGTGGGATCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRVPGRS*VGSEDL
Trigger: CAAATCCTCAGATCCCACTCAGGACCTTCCTGGTAC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGCGTGCAGGTCACTGTaGATGTCCTTGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRACRSL*MSLLSG
Trigger: TCCAGACAACAAGGACATTCACAGTGACCTGCACGC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAGCTGGCACTCTTTATaGCCAGGTGGCCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFSWHSL*PGGPAG
Trigger: TCCAGCGGGGCCACCTGGTCATAAAGAGTGCCAGCT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTAGCCTGCAGATGGCTTaGGGAGACTCCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFSLQMA*GDSSLL
Trigger: AAGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAGCCCAGCTCAATGCTaGCAGGCCCTCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSPAQC*QALFVQ
Trigger: CTGGACAAAGAGGGCCTGTCAGCATTGAGCTGGGCT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGCTTCCGTACTGACATaGAGTGGCTGCTTAGAGACG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEASVLT*SGCLET
Trigger: CGTCTCTAAGCAGCCACTTCATGTCAGTACGGAAGC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTTGGTTTTGCTGAAGTaGGGTGGCTCCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRLVLLK*GGSCGL
Trigger: AAGCCCACAGGAGCCACCTCACTTCAGCAAAACCAA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACAACAGTTCTTGAGCTaGTGGAGAGCAGCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEQQFLS*WRAARF
Trigger: GAACCGAGCTGCTCTCCAGCAGCTCAAGAACTGTTG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGGGACTTTTGCTGGCTaGCGTCTTGCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPGTFAG*RLADTA
Trigger: AGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGGGCGGCGTCGGCCTTaGCATTCAGGGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSGRRRP*HSGRCC
Trigger: GCAACATCTCCCTGAATGGCAAGGCCGACGCCGCCC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACACACAGGAAGGCTGTaGTTTCGCCATCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKHTGRL*FRHPLS
Trigger: GGAGAGCGGATGGCGAAAGCACAGCCTTCCTGTGTG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATGCGCTGTGGACGAGTaGACACTGGCCCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPCAVDE*TLALLI
Trigger: GATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGACTGTGGCCCCTCAGTaGGCTGTGGACGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRTVAPQ*AVDECT
Trigger: TGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCAGGTCAGCCAGAGCTaGCAGGAACTGCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPQVSQS*QELPAV
Trigger: AACAGCAGGCAGTTCCTGGCAGCTCTGGCTGACCTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGACCCTGCTGCTTTTaGTGCTGGTTCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGPCCF*CWFLWS
Trigger: ACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGGACTTGCTGATTCCTaGCCTGCTCTGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPGLADS*PALWGC
Trigger: GCATCCCCACAGAGCAGGGCAGGAATCAGCAAGTCC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACAGTGCCGCTCTCACTaGGCTGCAGCTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGQCRSH*AAAGGS
Trigger: AGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCGTCTGAAACGCTACTaGTTGAAGTCAAACTACTGG +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRRLKRY*LKSNYW
Trigger: CCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACATTGTGGACACCCATaGTCAGGGGAGGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEHCGHP*SGEELN
Trigger: GTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAGGGGCTGTCGGTGCTaGGAGAGGCAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSRGCRC*ERQCCL
Trigger: CAAGCAGCACTGCCTCTCCCAGCACCGACAGCCCCT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCCTCCATCCTCTGCTaGAAGTCCTCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLASILC*KSSQPC
Trigger: GCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGGTGGCCAAGCTCCATaGTCTGCTGGCGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIGGQAP*SAGGSA
Trigger: AGCTGAACCGCCAGCAGACCATGGAGCTTGGCCACC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCCTGCTGCAGGGCTTaGCTCTTCCTCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSACCRA*LFLRVP
Trigger: TGGCACCCTGAGGAAGAGCCAAGCCCTGCAGCAGGC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTGGACGACCGAGCTGTaGCCCATGCTGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSWTTEL*PMLAAA
Trigger: AGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCATTCCCAGCAAGGACTaGACGACCGAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIIPSKD*TTELWP
Trigger: GGGCCACAGCTCGGTCGTCCAGTCCTTGCTGGGAAT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGAACCCCTCTCCTGTTaGCCCGAGACACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLEPLSC*PETRQL
Trigger: GAGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGAACCCCTCTCCTGTTaGCCCGAGACACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGEPLSC*PETRQL
Trigger: GAGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCGGACAACCTGCCAATaGCCTTGGCGGGCGGCACAA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLRTTCQ*PWRAAQ
Trigger: TTGTGCCGCCCGCCAAGGCCATTGGCAGGTTGTCCG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGCATACTGGTACCTCTaGGCTGCCTCCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEAYWYL*AASFIF
Trigger: GAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAGGCTTCGTAGGATTTaGGTTTCAATTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRRLRRI*VSIPEP
Trigger: AGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTGGGAGTCGGGGAAATaGACTCTTCCTGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRWESGK*TLPVKR
Trigger: CCTCTTCACAGGAAGAGTCCATTTCCCCGACTCCCA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGACAGACGGTGGTGGCTaGGATCTGGGAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPRETDGGG*DLGVGE
Trigger: TTCCCCGACTCCCAGATCCCAGCCACCACCGTCTGT...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAACCCAGATGTTGGTTaGTCTTCACTATCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRNPDVG*SSLSVP
Trigger: AGGCACAGATAGTGAAGACCAACCAACATCTGGGTT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGATTGCTTTGCTGCTaGAACCTGGCGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGLLCC*NLAVLS
Trigger: GGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCTTAGAGACGCCCTCTaGGTAGAGATGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPLRDAL*VEMRNP
Trigger: GGGGTTCCTCATCTCTACCCAGAGGGCGTCTCTAAG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCACTTAGAGACGCCCTCTaGGTAGAGATGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPLRDAL*VEMRNP
Trigger: GGGGTTCCTCATCTCTACCCAGAGGGCGTCTCTAAG...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATTTGCTGAAGTGAGGTaGCTCCTGTGGGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEFAEVR*LLWASV
Trigger: TACGGAAGCCCACAGGAGCCACCTCACTTCAGCAAA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCATACTTGGGCTTCCTaGCGGGACCTGGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRHTWAS*RDLEIF
Trigger: AAAAATCTCCAGGTCCCGTCAGGAAGCCCAAGTATG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGTGTGGAACAAGGGCTaGTGCCTTGACTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIVWNKG*CLDSGL
Trigger: CAGCCCTGAGTCAAGGCATCAGCCCTTGTTCCACAC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTTGGGCCGTGGCATTATaGGCGAGCCAGAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSWAVAL*ASQSSE
Trigger: CTCAGAGCTCTGGCTCGCTCATAATGCCACGGCCCA...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTACTTGTCGCTGCAACTaGGTTGGGCCGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPTCRCN*VGPWHY
Trigger: ATAATGCCACGGCCCAACTCAGTTGCAGCGACAAGT...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGTACCAGGAAGGTCCTaGGTGGGATCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPVPGRS*VGSEDL
Trigger: CAAATCCTCAGATCCCACTCAGGACCTTCCTGGTAC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGTACCAGGAAGGTCCTaGGTGGGATCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPVPGRS*VGSEDL
Trigger: CAAATCCTCAGATCCCACTCAGGACCTTCCTGGTAC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGCGTGCAGGTCACTGTaGATGTCCTTGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPACRSL*MSLLSG
Trigger: TCCAGACAACAAGGACATTCACAGTGACCTGCACGC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAGCTGGCACTCTTTATaGCCAGGTGGCCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSWHSL*PGGPAG
Trigger: TCCAGCGGGGCCACCTGGTCATAAAGAGTGCCAGCT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCACACCAGCCACTCTCTaGAGGACGGGTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSITPATL*RTGGRT
Trigger: TGTTCTGCCACCCGTCCTTCAGAGAGTGGCTGGTGT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTCTTCATGGCCAAGGTaGGACTGGACGCACAGGATG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPSSWPR*DWTHRM
Trigger: CATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTGGACCACTGCCCTGTaGCCCTTCAGACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLWTTAL*PFRQAQ
Trigger: CTGGGCTTGTCTGAAGGGTCACAGGGCAGTGGTCCA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCTGCATAACCAAGCCTaGCTGGGCTACAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPLHNQA*LGYSLS
Trigger: AGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATTGGTTTTGCTGAAGTaGGGTGGCTCCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPLVLLK*GGSCGL
Trigger: AAGCCCACAGGAGCCACCTCACTTCAGCAAAACCAA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATGGGGAACAGTTATCTaGCCTTCGGTCATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEWGTVI*PSVMKH
Trigger: GTGCTTCATGACCGAAGGGCAGATAACTGTTCCCCA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGGCTCCTCTGTTTTCTaGCAGCTCTGTGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEGSSVF*QLCVPQ
Trigger: TTGAGGAACACAGAGCTGGCAGAAAACAGAGGAGCC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGTGACAAACTGGGACTaGTGGATGCGATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRVTNWD*WMRSVS
Trigger: TGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCAC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGTGGCCGGCAGCAGCTaGGTAGCACAGTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLVAGSS*VAQCVH
Trigger: ATGAACGCACTGTGCTACGCAGCTGCTGCCGGCCAC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATGCGCTGTGGACGAGTaGACACTGGCCCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKCAVDE*TLALLI
Trigger: GATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGGAGGAATTCCACGGTaGTCAGGTGTCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIGGIPR*SGVPHR
Trigger: CCTGTGAGGGACACCTGAGCACCGTGGAATTCCTCC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAGGTCAGCCAGAGCTaGCAGGAACTGCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQVSQS*QELPAV
Trigger: AACAGCAGGCAGTTCCTGGCAGCTCTGGCTGACCTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGAGTTTCACAGCCTCTTaGAGGTCAGCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPSFTAS*RSARAA
Trigger: GGCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCTAAATGCTGGTTTCTaGTCACGGCAGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLNAGF*SRQGLQ
Trigger: CTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCATTGTGGACACCCATaGTCAGGGGAGGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPHCGHP*SGEELN
Trigger: GTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGATCTCCCGGCACCCTaGGGCTTTCCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRDLPAP*GFPHTW
Trigger: CCAAGTATGTGGAAAGCCCCAGGGTGCCGGGAGATC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACAGTTCTTGAGCTGCTaGAGAGCAGCTCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEQFLSC*RAARFI
Trigger: AATGAACCGAGCTGCTCTCCAGCAGCTCAAGAACTG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATGTTCCATTCCAGACTaGAGCCACTCCGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSECSIPD*SHSGHH
Trigger: ATGATGACCGGAGTGGCTCCAGTCTGGAATGGAACA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCTCCTCTTCTGCCACTaGGGAACAGTTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPLLFCH*GTVICP
Trigger: AGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTTGGGATCTGAGGATTTaGGTGACAAACTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFWDLRI*VTNWDC
Trigger: GCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCA...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTTGCTGAGGATGTCCTaGCTGCTGTGGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSILLRMS*LLWTLC
Trigger: GCACAGGGTCCACAGCAGCCAGGACATCCTCAGCAA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCTCCGCAGCACCAGATaGCTGCTGACTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLRSTR*LLTLLM
Trigger: CATCAGCAAAGTCAGCAGCCATCTGGTGCTGCGGAG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACTCCGCAGCACCAGATaGCTGCTGACTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKLRSTR*LLTLLM
Trigger: CATCAGCAAAGTCAGCAGCCATCTGGTGCTGCGGAG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACAGCCCTGCTCGCCTTaGATGTGGCCGGCGTTGATA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGQPCSP*MWPALI
Trigger: TATCAACGCCGGCCACATCCAAGGCGAGCAGGGCTG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGAGCGTGTCCGTTCCTaGGCTCACACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSERVRS*AHTGRL
Trigger: CAGCCTTCCTGTGTGAGCCCAGGAACGGACACGCTC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCACAGAGCCTGCAGATaGCTTGAGGAGACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPHRACR*LEETPV
Trigger: GACTGGAGTCTCCTCAAGCCATCTGCAGGCTCTGTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTCCTGTAGTTCACGTTaGCCCCTCCCAAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRSCSSR*PLPKSG
Trigger: TCCTGATTTTGGGAGGGGCCAACGTGAACTACAGGA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCCCTTCTTATCCAAGTaGTCCACCCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPPFLSK*STLAPF
Trigger: GAAGGGGGCAAGGGTGGACCACTTGGATAAGAAGGG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATGCTGCTTTTGCTGCTaGTTCCTCTGGAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSECCFCC*FLWSCL
Trigger: CAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCATTGGCTGGAGCTGGTaGGGGACCCTGCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIIGWSW*GTLLLL
Trigger: CAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAAT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTATCCGAGTCATTGGCTaGAGCTGGTGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSIRVIG*SWWGTL
Trigger: CAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGAT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACATTATCCGAGTCATTaGCTGGAGCTGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKHYPSH*LELVGD
Trigger: GTCCCCCACCAGCTCCAGCCAATGACTCGGATAATG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAACAGACGGTGGTGGCTaGGATCTGGGAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGTDGGG*DLGVGE
Trigger: TTCCCCGACTCCCAGATCCCAGCCACCACCGTCTGT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGAAGGTTGCGGATGTATaGGGAAGGGACAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPKVADV*GRDRRW
Trigger: CCACCGTCTGTCCCTTCCCCATACATCCGCAACCTT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAATAACCAAGCCTGACTaGGCTACAGTCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEITKPD*ATVSLR
Trigger: CCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTAT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGTTCCCTCTAAATGCTaGTTTCTGCTCACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPVPSKC*FLLTAG
Trigger: CCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAAC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGCAGGCCAGCTGCAGTaGCTGTGTTTGTCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRAGQLQ*LCLSVA
Trigger: GGCTACTGACAAACACAGCCACTGCAGCTGGCCTGC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGCAGGCCAGCTGCAGTaGCTGTGTTTGTCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFAGQLQ*LCLSVA
Trigger: GGCTACTGACAAACACAGCCACTGCAGCTGGCCTGC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATTTGCTGAAGTGAGGTaGCTCCTGTGGGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPFAEVR*LLWASV
Trigger: TACGGAAGCCCACAGGAGCCACCTCACTTCAGCAAA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCATACTTGGGCTTCCTaGCGGGACCTGGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPHTWAS*RDLEIF
Trigger: AAAAATCTCCAGGTCCCGTCAGGAAGCCCAAGTATG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAACTTGTCGCTGCAACTaGGTTGGGCCGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKTCRCN*VGPWHY
Trigger: ATAATGCCACGGCCCAACTCAGTTGCAGCGACAAGT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRPGQSN*CPKRSI
Trigger: AATGCTCCTCTTCGGACATCAATTAGATTGCCCTGG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTCATGCGGCTTCCGTaGCAGCTCAGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLMRLP*QLSATS
Trigger: GCTGGTGGCACTGAGCTGTCACGGAAGCCGCATGAG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGCAGCTGGGGTTCCTTaGTCAGAAGGTCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRAAGVP*SEGLCR
Trigger: CCTACAGAGACCTTCTGATCAAGGAACCCCAGCTGC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTACACCAGCCACTCTCTaGAGGACGGGTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLTPATL*RTGGRT
Trigger: TGTTCTGCCACCCGTCCTTCAGAGAGTGGCTGGTGT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAGCCTGCAGATGGCTTaGGGAGACTCCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSLQMA*GDSSLL
Trigger: AAGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAAGAGCAGCACCTTTTaGGAGGAGGAATTCCACGGT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPKSSTF*EEEFHG
Trigger: ACCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTAAGAGCAGCACCTTTTaGGAGGAGGAATTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPKSSTF*EEEFHG
Trigger: ACCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTT...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAGACTCTCAGTTCATTaGACGGCCTCATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRRLSVH*TASCLL
Trigger: GAGAAGACATGAGGCCGTTCAATGAACTGAGAGTCT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGGGCCAGGAGCCTCTTaGTTTCCTGATTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFGPGAS*FPDCWD
Trigger: GTCCCAACAATCAGGAAATCAAGAGGCTCCTGGCCC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTAATGGACTCTTCCTGTaGAGAGGTGTCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFNGLFL*RGVFLF
Trigger: GAAGAGGAAGACACCTCTTCACAGGAAGAGTCCATT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR TCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACTCTCAGGGACTTGCTaGTTCCTGCCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGLSGTC*FLPCSV
Trigger: CACAGAGCAGGGCAGGAATCAGCAAGTCCCTGAGAG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACTGCATAACCAAGCCTaGCTGGGCTACAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKLHNQA*LGYSLS
Trigger: AGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTGTTATCCTGTTATCTTaGCAGAGGGCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFVILLS*QRAGIW
Trigger: CCAAATCCCAGCCCTCTGTCAAGATAACAGGATAAC...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGTTATCCTGTTATCTTaGCAGAGGGCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEVILLS*QRAGIW
Trigger: CCAAATCCCAGCCCTCTGTCAAGATAACAGGATAAC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGGGACTTTTGCTGGCTaGCGTCTTGCTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRGTFAG*RLADTA
Trigger: AGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGATTTCCTGAAAATTTaGTCTCACGGTCACGATCAA +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRDFLKI*SHGHDQ
Trigger: TTGATCGTGACCGTGAGAGCAAATTTTCAGGAAATC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGGCGGCGTCGGCCTTaGCATTCAGGGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFGRRRP*HSGRCC
Trigger: GCAACATCTCCCTGAATGGCAAGGCCGACGCCGCCC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACACACAGGAAGGCTGTaGTTTCGCCATCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGHTGRL*FRHPLS
Trigger: GGAGAGCGGATGGCGAAAGCACAGCCTTCCTGTGTG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACCAAGCTCCATGGTCTaGTGGCGGTTCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGPSSMV*WRFSLL
Trigger: GAGCAAGCTGAACCGCCAGCAGACCATGGAGCTTGG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCCAAGCTCCATGGTCTaGTGGCGGTTCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLPSSMV*WRFSLL
Trigger: GAGCAAGCTGAACCGCCAGCAGACCATGGAGCTTGG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAGACAGCCCCTCTGTaGTGTAACCGATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQTAPL*CNRSTE
Trigger: CTCTGTGGATCGGTTACAGCACAGAGGGGCTGTCTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGCGCTGTGGACGAGTaGACACTGGCCCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFCAVDE*TLALLI
Trigger: GATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCGGCTGTCAGTGCCTaGTGCAGGGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSAAVSA*CRAWLF
Trigger: GAAGAGCCAAGCCCTGCAGCAGGCACTGACAGCCGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGATTTCATGTTCCTCTaGCATTCCCAGCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEDFMFL*HSQQGL
Trigger: CAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAGGTACTGGACCACTaGCCTGTGACCCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQVLDH*PVTLQT
Trigger: TGTCTGAAGGGTCACAGGGCAGTGGTCCAGTACCTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCAGGTACTGGACCACTaGCCTGTGACCCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRQVLDH*PVTLQT
Trigger: TGTCTGAAGGGTCACAGGGCAGTGGTCCAGTACCTG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGATACAGCACAGTCTCTaGATCACCATAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRIQHSL*ITIESG
Trigger: GCCGCTTTCTATGGTGATGCAGAGACTGTGCTGTAT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCCCTGCTGCTTTTGCTaGTGGTTCCTCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRPCCFC*WFLWSC
Trigger: GCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTATCCCTCTTGAAGGTTaGGGATGTATGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPIPLEG*GCMGKG
Trigger: TCCCTTCCCCATACATCCGCAACCTTCAAGAGGGAT...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGGACTTGCTGATTCCTaGCCTGCTCTGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSGLADS*PALWGC
Trigger: GCATCCCCACAGAGCAGGGCAGGAATCAGCAAGTCC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCTAAATGCTGGTTTCTaGTCACGGCAGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRLNAGF*SRQGLQ
Trigger: CTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCCACAACCAGTTCCTaGAGTGAAGGGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGATTSS*SEGTGS
Trigger: GGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGAGACTGCAGGCCAGCTaGAGTGGCTGTGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRRLQAS*SGCVCQ
Trigger: CTGACAAACACAGCCACTGCAGCTGGCCTGCAGTCT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCAATGGTTATGTGTGTaGCGCTCGGGATCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIQWLCV*RSGSPL
Trigger: GAGAGGGGATCCCGAGCGCCACACACATAACCATTG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCAATGGTTATGTGTGTaGCGCTCGGGATCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRQWLCV*RSGSPL
Trigger: GAGAGGGGATCCCGAGCGCCACACACATAACCATTG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTAGGGGCTGTCGGTGCTaGGAGAGGCAGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSRGCRC*ERQCCL
Trigger: CAAGCAGCACTGCCTCTCCCAGCACCGACAGCCCCT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATGTTCCATTCCAGACTaGAGCCACTCCGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPCSIPD*SHSGHH
Trigger: ATGATGACCGGAGTGGCTCCAGTCTGGAATGGAACA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTGGGATCTGAGGATTTaGGTGACAAACTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPWDLRI*VTNWDC
Trigger: GCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCAGGAAGGTCCTGAGTaGGATCTGAGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPQEGPE*DLRIWV
Trigger: CACCCAAATCCTCAGATCCCACTCAGGACCTTCCTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACAGGAAGGTCCTGAGTaGGATCTGAGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKQEGPE*DLRIWV
Trigger: CACCCAAATCCTCAGATCCCACTCAGGACCTTCCTG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGCCTCCATCCTCTGCTaGAAGTCCTCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFASILC*KSSQPC
Trigger: GCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAGCTCCATGGTCTGCTaGCGGTTCAGCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGSSMVC*RFSLLS
Trigger: GGAGAGCAAGCTGAACCGCCAGCAGACCATGGAGCT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAGCTCCATGGTCTGCTaGCGGTTCAGCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSSMVC*RFSLLS
Trigger: GGAGAGCAAGCTGAACCGCCAGCAGACCATGGAGCT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGACTGGACGCACAGGATaGGGGCATTGTTTAACACTT +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRTGRTG*GHCLTL
Trigger: AAGTGTTAAACAATGCCCCCATCCTGTGCGTCCAGT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGCCCTTCTTATCCAAGTaGTCCACCCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPREPFLSK*STLAPF
Trigger: GAAGGGGGCAAGGGTGGACCACTTGGATAAGAAGGG...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCCCTTCTTATCCAAGTaGTCCACCCTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRPFLSK*STLAPF
Trigger: GAAGGGGGCAAGGGTGGACCACTTGGATAAGAAGGG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATGGACGAGTGCACACTaGCCCTTCTTATCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKWTSAH*PFLSKW
Trigger: CCACTTGGATAAGAAGGGCCAGTGTGCACTCGTCCA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCCTGCTGCAGGGCTTaGCTCTTCCTCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSACCRA*LFLRVP
Trigger: TGGCACCCTGAGGAAGAGCCAAGCCCTGCAGCAGGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGCCTGCTGCAGGGCTTaGCTCTTCCTCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFACCRA*LFLRVP
Trigger: TGGCACCCTGAGGAAGAGCCAAGCCCTGCAGCAGGC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGGGCGCATCCCACTGTaGTCCACATGTTCTATCACG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFGRIPL*STCSIT
Trigger: CGTGATAGAACATGTGGACCACAGTGGGATGCGCCC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGCATACTGGTACCTCTaGGCTGCCTCCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKAYWYL*AASFIF
Trigger: GAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGATTCCGCAAGGCATACTaGTACCTCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGFRKAY*YLWAAS
Trigger: GGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAA...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTATTGGCTGGAGCTGGTaGGGGACCCTGCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSIGWSW*GTLLLL
Trigger: CAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAAT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGAAGGTTGCGGATGTATaGGGAAGGGACAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPREKVADV*GRDRRW
Trigger: CCACCGTCTGTCCCTTCCCCATACATCCGCAACCTT...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAAGGTTGCGGATGTATaGGGAAGGGACAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFKVADV*GRDRRW
Trigger: CCACCGTCTGTCCCTTCCCCATACATCCGCAACCTT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTCCGGAACCCAGATGTTaGTTGGTCTTCACTATCTGT +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFPEPRC*LVFTIC
Trigger: ACAGATAGTGAAGACCAACCAACATCTGGGTTCCGG...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACCGGAACCCAGATGTTaGTTGGTCTTCACTATCTGT +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEPEPRC*LVFTIC
Trigger: ACAGATAGTGAAGACCAACCAACATCTGGGTTCCGG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCGAGAGTCTGGTCCTTaGACCTTGAATCCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPRESGP*TLNPSE
Trigger: TTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCATGATGCCCATAAATaGAGTGTTGCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPHDAHK*SVAGPV
Trigger: CACAGGCCCCGCAACACTCCATTTATGGGCATCATG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCAGGCCAGCTGCAGTaGCTGTGTTTGTCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGAGQLQ*LCLSVA
Trigger: GGCTACTGACAAACACAGCCACTGCAGCTGGCCTGC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTATCTTGACAGAGGGCTaGGATTTGGCACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SICDQRDPLVHTARPVHFILTEG*DLALVL
Trigger: GAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGAT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCTTAGAGACGCCCTCTaGGTAGAGATGAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRLRDAL*VEMRNP
Trigger: GGGGTTCCTCATCTCTACCCAGAGGGCGTCTCTAAG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTTGGCTGCCGTCTTGCTaGCACAGCTATTCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSWLPSC*HSYSRS
Trigger: CGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCA...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCAGCTGGGGTTCCTTaGTCAGAAGGTCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLAAGVP*SEGLCR
Trigger: CCTACAGAGACCTTCTGATCAAGGAACCCCAGCTGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGCACTGATGATTTCCTaGAAATTTGCTCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEALMIS*KFALTV
Trigger: GACCGTGAGAGCAAATTTTCAGGAAATCATCAGTGC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAGCCTGCAGATGGCTTaGGGAGACTCCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFSLQMA*GDSSLL
Trigger: AAGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCTGCATAACCAAGCCTaGCTGGGCTACAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSILHNQA*LGYSLS
Trigger: AGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAACCAGTTCCTGCAGTaGAGGGACCGGTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSNQFLQ*RDRFPL
Trigger: TAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCTGGTCCTTGGACCTTaGATCCGTCTGAAACGCTAC +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRLVLGP*IRLKRY
Trigger: GTAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGCTTCCGTACTGACATaGAGTGGCTGCTTAGAGACG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFASVLT*SGCLET
Trigger: CGTCTCTAAGCAGCCACTTCATGTCAGTACGGAAGC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTCGCTTTGGTTTTGCTaGAGTGAGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRSLWFC*SEVAPV
Trigger: CACAGGAGCCACCTCACTTCAGCAAAACCAAAGCGA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAACAGTTCTTGAGCTaGTGGAGAGCAGCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQQFLS*WRAARF
Trigger: GAACCGAGCTGCTCTCCAGCAGCTCAAGAACTGTTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAACAGCAAAGCAGCAATaGTGTGCACAAACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSETAKQQ*CAQTQV
Trigger: TACCTGAGTTTGTGCACAGCATTGCTGCTTTGCTGT...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTACGGGTGGCAGAACATaGGGGTTTTGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSTGGRT*GFCPSS
Trigger: AGAGGAGGGACAAAACCCGCATGTTCTGCCACCCGT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCTGGCGGTTCAGCTTaGTCTCCTGTCGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSAGGSA*SPVERT
Trigger: TGTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCCGATCCACAGAGCCTaGAGATGGCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSPIHRA*RWLEET
Trigger: AGTCTCCTCAAGCCATCTGCAGGCTCTGTGGATCGG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCAGACAGCCCCTCTGTaGTGTAACCGATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLQTAPL*CNRSTE
Trigger: CTCTGTGGATCGGTTACAGCACAGAGGGGCTGTCTG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACTGTGGCCCCTCAGTaGGCTGTGGACGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSTVAPQ*AVDECT
Trigger: TGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATGTCTGGTCTATCTCTaGTCCTTCTTCGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPCLVYL*SFFDQV
Trigger: TACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTATACAGCACAGTCTCTaGATCACCATAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPIQHSL*ITIESG
Trigger: GCCGCTTTCTATGGTGATGCAGAGACTGTGCTGTAT...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCCTGCTGTTCCTTTTTaGTCTCGCCCGGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPPAVPF*SRPGIK
Trigger: TTTTATGCCCGGGCGAGAGCAAAAAGGAACAGCAGG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAGTTTCACAGCCTCTTaGAGGTCAGCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSSFTAS*RSARAA
Trigger: GGCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCCTCTGGAGTTGCTTaGACTCTTCTTCAACACGGG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSSGVA*TLLQHG
Trigger: CCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGTGGTTCCTCTGGAGTTaGTTGCACTCTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRWFLWS*LHSSST
Trigger: TGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCA...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACCCTGCTGCTTTTGCTaGTGGTTCCTCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGPCCFC*WFLWSC
Trigger: GCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGGACCCTGCTGCTTTTaGTGCTGGTTCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGGPCCF*CWFLWS
Trigger: ACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGTGGGGGACCCTGCTaGTTTTGCTGCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFGGGPC*FCCWFL
Trigger: GAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACTAAATGCTGGTTTCTaGTCACGGCAGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGLNAGF*SRQGLQ
Trigger: CTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATTGACATCTTTATGCTaGTCGATGGAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPLTSLC*SMESQR
Trigger: CCTCTGGCTCTCCATCGAGCAGCATAAAGATGTCAA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGAACTTGACATCTTTATaGTGCTCGATGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRNLTSL*CSMESQ
Trigger: CTGGCTCTCCATCGAGCAGCATAAAGATGTCAAGTT...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCAGTTCTTGAGCTGCTaGAGAGCAGCTCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPQFLSC*RAARFI
Trigger: AATGAACCGAGCTGCTCTCCAGCAGCTCAAGAACTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCAGGAAGGTCCTGAGTaGGATCTGAGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIQEGPE*DLRIWV
Trigger: CACCCAAATCCTCAGATCCCACTCAGGACCTTCCTG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACTCCGCAGCACCAGATaGCTGCTGACTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGLRSTR*LLTLLM
Trigger: CATCAGCAAAGTCAGCAGCCATCTGGTGCTGCGGAG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCAGCCCTGCTCGCCTTaGATGTGGCCGGCGTTGATA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSQPCSP*MWPALI
Trigger: TATCAACGCCGGCCACATCCAAGGCGAGCAGGGCTG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGAGCGTGTCCGTTCCTaGGCTCACACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSERVRS*AHTGRL
Trigger: CAGCCTTCCTGTGTGAGCCCAGGAACGGACACGCTC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACACAGAGCCTGCAGATaGCTTGAGGAGACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGHRACR*LEETPV
Trigger: GACTGGAGTCTCCTCAAGCCATCTGCAGGCTCTGTG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCCTGTAGTTCACGTTaGCCCCTCCCAAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSCSSR*PLPKSG
Trigger: TCCTGATTTTGGGAGGGGCCAACGTGAACTACAGGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAGTTCAGCAGGTACTaGAGAATGTCACTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQFSRY*RMSLWP
Trigger: GGGCCACAGTGACATTCTCCAGTACCTGCTGAACTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCATTCCCAGCAAGGACTaGACGACCGAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFIPSKD*TTELWP
Trigger: GGGCCACAGCTCGGTCGTCCAGTCCTTGCTGGGAAT...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCATTATCCGAGTCATTaGCTGGAGCTGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLHYPSH*LELVGD
Trigger: GTCCCCCACCAGCTCCAGCCAATGACTCGGATAATG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGGGAGTCGGGGAAATaGACTCTTCCTGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFWESGK*TLPVKR
Trigger: CCTCTTCACAGGAAGAGTCCATTTCCCCGACTCCCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGGTTCCCTCTAAATGCTaGTTTCTGCTCACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPREVPSKC*FLLTAG
Trigger: CCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAAC...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAAGTCAAACTACTGGTaGAACTTGACATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: QCGNQHDGAYREHAERWRKSNYW*NLTSLC
Trigger: GCATAAAGATGTCAAGTTCCACCAGTAGTTTGACTT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTCTGATCCGAGAGTCTaGTCCTTGGACCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPSDPRV*SLDLES
Trigger: GGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGCATGATGCCCATAAATaGAGTGTTGCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SKCFLLLRVTNQGREPREHDAHK*SVAGPV
Trigger: CACAGGCCCCGCAACACTCCATTTATGGGCATCATG...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCAGAGGGCTGGGATTTaGCACTTGTTCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFQRAGI*HLFSSS
Trigger: GCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTTTGCTGAAGTGAGGTaGCTCCTGTGGGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRFAEVR*LLWASV
Trigger: TACGGAAGCCCACAGGAGCCACCTCACTTCAGCAAA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCATACTTGGGCTTCCTaGCGGGACCTGGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIHTWAS*RDLEIF
Trigger: AAAAATCTCCAGGTCCCGTCAGGAAGCCCAAGTATG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCTTGTCAACAGTTCTTaGGCTGCTGGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLLVNSS*AAGEQL
Trigger: GAGCTGCTCTCCAGCAGCTCAAGAACTGTTGACAAG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTTTTCCTCTATCTGGTaGAAGAGCCAATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPFSSIW*KSQSLP
Trigger: GGGAAGAGATTGGCTCTTTCACCAGATAGAGGAAAA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCGTGCAGGTCACTGTaGATGTCCTTGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLACRSL*MSLLSG
Trigger: TCCAGACAACAAGGACATTCACAGTGACCTGCACGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGACGTGTCGGTGCCGTTaGCTTCGATTTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRTCRCR*LRFHVP
Trigger: AGGAACATGAAATCGAAGTCAACGGCACCGACACGT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGAAGAGCAGCACCTTTTaGGAGGAGGAATTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRKSSTF*EEEFHG
Trigger: ACCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCAGCCCAGCTCAATGCTaGCAGGCCCTCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFSPAQC*QALFVQ
Trigger: CTGGACAAAGAGGGCCTGTCAGCATTGAGCTGGGCT...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGAGACTCTCAGTTCATTaGACGGCCTCATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPRLSVH*TASCLL
Trigger: GAGAAGACATGAGGCCGTTCAATGAACTGAGAGTCT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACAATTCCAGAGCCTTTaGAGCAAATTCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEQFQSL*SKFFCQ
Trigger: TTGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAATGGACTCTTCCTGTaGAGAGGTGTCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKNGLFL*RGVFLF
Trigger: GAAGAGGAAGACACCTCTTCACAGGAAGAGTCCATT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCTGGTCCTTGGACCTTaGATCCGTCTGAAACGCTAC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSLVLGP*IRLKRY
Trigger: GTAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCTCAGGGGAGGAACTaGACACGGTTTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSAQGRN*TRFGLA
Trigger: AGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCTTCCGTACTGACATaGAGTGGCTGCTTAGAGACG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLASVLT*SGCLET
Trigger: CGTCTCTAAGCAGCCACTTCATGTCAGTACGGAAGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTCGCTTTGGTTTTGCTaGAGTGAGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSLWFC*SEVAPV
Trigger: CACAGGAGCCACCTCACTTCAGCAAAACCAAAGCGA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGGGGAACAGTTATCTaGCCTTCGGTCATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFWGTVI*PSVMKH
Trigger: GTGCTTCATGACCGAAGGGCAGATAACTGTTCCCCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTGCTTTAACTTCCGGTaGCCTACCTCCAGCCGTATT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSICFNFR*PTSSRI
Trigger: AATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGGCTCCTCTGTTTTCTaGCAGCTCTGTGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFGSSVF*QLCVPQ
Trigger: TTGAGGAACACAGAGCTGGCAGAAAACAGAGGAGCC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGTGACAAACTGGGACTaGTGGATGCGATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFVTNWD*WMRSVS
Trigger: TGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCAC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGATTTCATGTTCCTCTaGCATTCCCAGCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKDFMFL*HSQQGL
Trigger: CAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGGAGGAATTCCACGGTaGTCAGGTGTCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSGGIPR*SGVPHR
Trigger: CCTGTGAGGGACACCTGAGCACCGTGGAATTCCTCC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCTGGTACCTCTGGGCTaGCTCCTTCATCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLLVPLG*LLHLPF
Trigger: AAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACTGCCAGGAACTGCCTaGTGTTCCTTTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGLPGTA*CSFLLS
Trigger: CGAGAGCAAAAAGGAACAGCAGGCAGTTCCTGGCAG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCTGCCAGGAACTGCCTaGTGTTCCTTTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLLPGTA*CSFLLS
Trigger: CGAGAGCAAAAAGGAACAGCAGGCAGTTCCTGGCAG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGAGAGCTGCCAGGAACTaGCTGCTGTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRRAARN*LLFLFA
Trigger: AGCAAAAAGGAACAGCAGGCAGTTCCTGGCAGCTCT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAGAGCTGCCAGGAACTaGCTGCTGTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFRAARN*LLFLFA
Trigger: AGCAAAAAGGAACAGCAGGCAGTTCCTGGCAGCTCT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCATCCCTCTTGAAGGTTaGGGATGTATGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIIPLEG*GCMGKG
Trigger: TCCCTTCCCCATACATCCGCAACCTTCAAGAGGGAT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTTGACATCTTTATGCTaGTCGATGGAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLTSLC*SMESQR
Trigger: CCTCTGGCTCTCCATCGAGCAGCATAAAGATGTCAA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGATCTCCCGGCACCCTaGGGCTTTCCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFDLPAP*GFPHTW
Trigger: CCAAGTATGTGGAAAGCCCCAGGGTGCCGGGAGATC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCAGTTCTTGAGCTGCTaGAGAGCAGCTCGGTTCATT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRQFLSC*RAARFI
Trigger: AATGAACCGAGCTGCTCTCCAGCAGCTCAAGAACTG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCTCCTCTTCTGCCACTaGGGAACAGTTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLLLFCH*GTVICP
Trigger: AGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGTCAGTTGTGATGCTTaGTACTTCAAACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPVSCDA*YFKQQG
Trigger: CCCTTGCTGTTTGAAGTACCAAGCATCACAACTGAC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTGGGATCTGAGGATTTaGGTGACAAACTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIWDLRI*VTNWDC
Trigger: GCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTGCTCATCCGTCATaGGGTGGAGGGACGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFSAHPS*GGGTQE
Trigger: CTCTTGCGTCCCTCCACCCCATGACGGATGAGCAGA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAACTGGACGCACAGGATaGGGGCATTGTTTAACACTT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKTGRTG*GHCLTL
Trigger: AAGTGTTAAACAATGCCCCCATCCTGTGCGTCCAGT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACCTGCCAATGGCCTTaGCGGGCGGCACAAAACAGA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSTCQWP*RAAQNR
Trigger: TCTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCATACTGGTACCTCTaGGCTGCCTCCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLAYWYL*AASFIF
Trigger: GAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTGCTGCTGGTTCCTCTaGAGTTGCTTGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSICCWFL*SCLHSS
Trigger: AGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTGCTGCTGGTTCCTCTaGAGTTGCTTGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRCCWFL*SCLHSS
Trigger: AGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGCTGCTTTTGCTGCTaGTTCCTCTGGAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFCCFCC*FLWSCL
Trigger: CAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTTGGGAGTCGGGGAAATaGACTCTTCCTGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSWESGK*TLPVKR
Trigger: CCTCTTCACAGGAAGAGTCCATTTCCCCGACTCCCA...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCATAACCAAGCCTGACTaGGCTACAGTCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFITKPD*ATVSLR
Trigger: CCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTAT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCATAACCAAGCCTGACTaGGCTACAGTCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIITKPD*ATVSLR
Trigger: CCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTAT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAACCCAGATGTTGGTTaGTCTTCACTATCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPNPDVG*SSLSVP
Trigger: AGGCACAGATAGTGAAGACCAACCAACATCTGGGTT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGTTCCCTCTAAATGCTaGTTTCTGCTCACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGVPSKC*FLLTAG
Trigger: CCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAAC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCGAGAGTCTGGTCCTTaGACCTTGAATCCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRRESGP*TLNPSE
Trigger: TTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCATGATGCCCATAAATaGAGTGTTGCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLHDAHK*SVAGPV
Trigger: CACAGGCCCCGCAACACTCCATTTATGGGCATCATG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAATCTTGACAGAGGGCTaGGATTTGGCACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKILTEG*DLALVL
Trigger: GAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGAT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAACACAGAGTCAGTTGTaGTGCTTGGTACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPTQSQL*CLVLQT
Trigger: TGTTTGAAGTACCAAGCATCACAACTGACTCTGTGT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCAGCTGGGGTTCCTTaGTCAGAAGGTCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSAAGVP*SEGLCR
Trigger: CCTACAGAGACCTTCTGATCAAGGAACCCCAGCTGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCAGGGAGATGTTGCTaGGGATGTCCTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFSGRCC*GCPGCC
Trigger: ACAGCAGCCAGGACATCCTCAGCAACATCTCCCTGA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTTCATGGCCAAGGTaGGACTGGACGCACAGGATG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFSSWPR*DWTHRM
Trigger: CATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGGGCCAGGAGCCTCTTaGTTTCCTGATTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSGPGAS*FPDCWD
Trigger: GTCCCAACAATCAGGAAATCAAGAGGCTCCTGGCCC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAATGGACTCTTCCTGTaGAGAGGTGTCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFNGLFL*RGVFLF
Trigger: GAAGAGGAAGACACCTCTTCACAGGAAGAGTCCATT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCCAAAGTCACCTCCTaGTTCCTTCTTGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGAKVTS*FLLASL
Trigger: AAGGGAAGCAAGAAGGAAGCAGGAGGTGACTTTGGC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTGGGGAACAGTTATCTaGCCTTCGGTCATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLWGTVI*PSVMKH
Trigger: GTGCTTCATGACCGAAGGGCAGATAACTGTTCCCCA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCCTCCAGCCGTATTGTaGCAGGGCAATCTAATTGAT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFPPAVL*QGNLID
Trigger: ATCAATTAGATTGCCCTGGCACAATACGGCTGGAGG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGATGCTTTAACTTCCGGTaGCCTACCTCCAGCCGTATT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGCFNFR*PTSSRI
Trigger: AATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCA...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGGCTCCTCTGTTTTCTaGCAGCTCTGTGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGGSSVF*QLCVPQ
Trigger: TTGAGGAACACAGAGCTGGCAGAAAACAGAGGAGCC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGACAGCAAAGCAGCAATaGTGTGCACAAACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPTAKQQ*CAQTQV
Trigger: TACCTGAGTTTGTGCACAGCATTGCTGCTTTGCTGT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGATTTCCTGAAAATTTaGTCTCACGGTCACGATCAA +
Preference number: 4 (lower is better)
Translates to: SAIAGILLQAVITHRSVRDFLKI*SHGHDQ
Trigger: TTGATCGTGACCGTGAGAGCAAATTTTCAGGAAATC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCACGGGTGGCAGAACATaGGGGTTTTGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFTGGRT*GFCPSS
Trigger: AGAGGAGGGACAAAACCCGCATGTTCTGCCACCCGT...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCTGGCGGTTCAGCTTaGTCTCCTGTCGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSAGGSA*SPVERT
Trigger: TGTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCCGATCCACAGAGCCTaGAGATGGCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSPIHRA*RWLEET
Trigger: AGTCTCCTCAAGCCATCTGCAGGCTCTGTGGATCGG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCAGACAGCCCCTCTGTaGTGTAACCGATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSQTAPL*CNRSTE
Trigger: CTCTGTGGATCGGTTACAGCACAGAGGGGCTGTCTG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGTCTGGTCTATCTCTaGTCCTTCTTCGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFCLVYL*SFFDQV
Trigger: TACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCCTGCTGTTCCTTTTTaGTCTCGCCCGGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSPAVPF*SRPGIK
Trigger: TTTTATGCCCGGGCGAGAGCAAAAAGGAACAGCAGG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTCCTCTGGAGTTGCTTaGACTCTTCTTCAACACGGG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSSGVA*TLLQHG
Trigger: CCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATGGTTCCTCTGGAGTTaGTTGCACTCTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKWFLWS*LHSSST
Trigger: TGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGGTTCCTCTGGAGTTaGTTGCACTCTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPWFLWS*LHSSST
Trigger: TGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCCCTGCTGCTTTTGCTaGTGGTTCCTCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSPCCFC*WFLWSC
Trigger: GCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGGACCCTGCTGCTTTTaGTGCTGGTTCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSGPCCF*CWFLWS
Trigger: ACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTATCCCTCTTGAAGGTTaGGGATGTATGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLIPLEG*GCMGKG
Trigger: TCCCTTCCCCATACATCCGCAACCTTCAAGAGGGAT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACGTCTGAAACGCTACTaGTTGAAGTCAAACTACTGG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKRLKRY*LKSNYW
Trigger: CCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAAGTGTCCTCTGTTGTaGACAAACTGTTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKKCPLL*TNCSQE
Trigger: CTCCTGTGAACAGTTTGTCCACAACAGAGGACACTT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGTCAGTTGTGATGCTTaGTACTTCAAACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKVSCDA*YFKQQG
Trigger: CCCTTGCTGTTTGAAGTACCAAGCATCACAACTGAC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCACAGAGCCTGCAGATaGCTTGAGGAGACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFHRACR*LEETPV
Trigger: GACTGGAGTCTCCTCAAGCCATCTGCAGGCTCTGTG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGATCCTGTAGTTCACGTTaGCCCCTCCCAAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGSCSSR*PLPKSG
Trigger: TCCTGATTTTGGGAGGGGCCAACGTGAACTACAGGA...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCACTGGACGCACAGGATaGGGGCATTGTTTAACACTT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFTGRTG*GHCLTL
Trigger: AAGTGTTAAACAATGCCCCCATCCTGTGCGTCCAGT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACCGTTTTTGTCTGTCTaGTCTATCTCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKPFLSV*SISAPS
Trigger: AGAAGGAGCAGAGATAGACCAGACAGACAAAAACGG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCCGTTTTTGTCTGTCTaGTCTATCTCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPPFLSV*SISAPS
Trigger: AGAAGGAGCAGAGATAGACCAGACAGACAAAAACGG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGATGCTGCTGGTTCCTCTaGAGTTGCTTGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGCCWFL*SCLHSS
Trigger: AGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCA...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCCGGAACCCAGATGTTaGTTGGTCTTCACTATCTGT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIPEPRC*LVFTIC
Trigger: ACAGATAGTGAAGACCAACCAACATCTGGGTTCCGG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTTCTGATCCGAGAGTCTaGTCCTTGGACCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSSDPRV*SLDLES
Trigger: GGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGA...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGATTGCTTTGCTGCTaGAACCTGGCGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFGLLCC*NLAVLS
Trigger: GGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTTGTCAACAGTTCTTaGGCTGCTGGAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLVNSS*AAGEQL
Trigger: GAGCTGCTCTCCAGCAGCTCAAGAACTGTTGACAAG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGCAAGGGCTGATGCCTTaGCTCAGGGCTGTGCACATG +
Preference number: 4 (lower is better)
Translates to: KIMRLEYFGISRSSHLILQGLMP*LRAVHM
Trigger: CATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTG...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR TCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGPGQSN*CPKRSI
Trigger: AATGCTCCTCTTCGGACATCAATTAGATTGCCCTGG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAACACAGAGTCAGTTGTaGTGCTTGGTACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKTQSQL*CLVLQT
Trigger: TGTTTGAAGTACCAAGCATCACAACTGACTCTGTGT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTTTTCCTCTATCTGGTaGAAGAGCCAATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIFSSIW*KSQSLP
Trigger: GGGAAGAGATTGGCTCTTTCACCAGATAGAGGAAAA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCATTCCAGAAGGAGAGTaGCAACTTCTTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIIPEGE*QLLHGQ
Trigger: TTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAAT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACAATTCCAGAGCCTTTaGAGCAAATTCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKQFQSL*SKFFCQ
Trigger: TTGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCTCGGGGGAGGGTTCTaGGAAGAAACTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFLGGGF*EETCIF
Trigger: AAAAATACAAGTTTCTTCTCAGAACCCTCCCCCGAG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGCTCGGGGGAGGGTTCTaGGAAGAAACTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRLGGGF*EETCIF
Trigger: AAAAATACAAGTTTCTTCTCAGAACCCTCCCCCGAG...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGACTACTGGTGGAACTTaGCATCTTTATGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRTTGGT*HLYAAR
Trigger: TCGAGCAGCATAAAGATGTCAAGTTCCACCAGTAGT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGTTATCCTGTTATCTTaGCAGAGGGCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSVILLS*QRAGIW
Trigger: CCAAATCCCAGCCCTCTGTCAAGATAACAGGATAAC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTGGTTTTGCTGAAGTaGGGTGGCTCCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFLVLLK*GGSCGL
Trigger: AAGCCCACAGGAGCCACCTCACTTCAGCAAAACCAA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCTTGACTCAGGGCTGTaGACATGGCTTCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFLDSGL*TWLHFC
Trigger: ACAAAAATGAAGCCATGTGCACAGCCCTGAGTCAAG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCCTCCAGCCGTATTGTaGCAGGGCAATCTAATTGAT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLPPAVL*QGNLID
Trigger: ATCAATTAGATTGCCCTGGCACAATACGGCTGGAGG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCACAGCAAAGCAGCAATaGTGTGCACAAACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFTAKQQ*CAQTQV
Trigger: TACCTGAGTTTGTGCACAGCATTGCTGCTTTGCTGT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTGGTACCTCTGGGCTaGCTCCTTCATCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLVPLG*LLHLPF
Trigger: AAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCTGCCAGGAACTGCCTaGTGTTCCTTTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFLPGTA*CSFLLS
Trigger: CGAGAGCAAAAAGGAACAGCAGGCAGTTCCTGGCAG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAACTTGACATCTTTATaGTGCTCGATGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFNLTSL*CSMESQ
Trigger: CTGGCTCTCCATCGAGCAGCATAAAGATGTCAAGTT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCTCCAGCCGTATTGTaGCAGGGCAATCTAATTGAT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLAPAVL*QGNLID
Trigger: ATCAATTAGATTGCCCTGGCACAATACGGCTGGAGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112568.8
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACATTTTTGTCTTCAATaGTTATGTGTGTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKHFCLQ*LCVWRS
Trigger: CGAGCGCCACACACATAACCATTGAAGACAAAAATG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCAGGGCTGTGCACATaGCTTCATTTTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSGLCT*LHFCLQ
Trigger: TTGAAGACAAAAATGAAGCCATGTGCACAGCCCTGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCTCCTCTTCTGCCACTaGGGAACAGTTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFLLFCH*GTVICP
Trigger: AGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGTCAGTTGTGATGCTTaGTACTTCAAACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIVSCDA*YFKQQG
Trigger: CCCTTGCTGTTTGAAGTACCAAGCATCACAACTGAC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTCTCTGAAGGACGGGTaGCAGAACATGCGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSSLKDG*QNMRVL
Trigger: CAAAACCCGCATGTTCTGCCACCCGTCCTTCAGAGA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGGACGAGTGCACACTaGCCCTTCTTATCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFWTSAH*PFLSKW
Trigger: CCACTTGGATAAGAAGGGCCAGTGTGCACTCGTCCA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCAGTTCAGCAGGTACTaGAGAATGTCACTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFQFSRY*RMSLWP
Trigger: GGGCCACAGTGACATTCTCCAGTACCTGCTGAACTG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCAGTTCAGCAGGTACTaGAGAATGTCACTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSQFSRY*RMSLWP
Trigger: GGGCCACAGTGACATTCTCCAGTACCTGCTGAACTG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCCGTTTTTGTCTGTCTaGTCTATCTCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIPFLSV*SISAPS
Trigger: AGAAGGAGCAGAGATAGACCAGACAGACAAAAACGG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGATTGGCTGGAGCTGGTaGGGGACCCTGCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KIMRLEYFGISRSSHLILIGWSW*GTLLLL
Trigger: CAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAAT...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
3UTR CAA 72 bp TTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTaGCACAACTCTGACCTGGACACCAATCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: LWPSLRVLLLVL*HNSDLDTNPNS
Trigger: AGAATTTGGATTGGTGTCCAGGTCAGAGTTGTGCAAAAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CAA 72 bp CTGTCCAGAACACTTTCGGAACCAGTTAGAGCTAATTaGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: LSRTLSEPVRAN*WPSLRVLLLVL
Trigger: AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTCCGAAAGTGTTCTGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGTCATCATTTTCCGATaGACTTGTGATTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPVIIFR*TCDCGY
Trigger: ATAGCCACAATCACAAGTTCATCGGAAAATGATGAC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGCACTGATGATTTCCTaGAAATTTGCTCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLALMIS*KFALTV
Trigger: GACCGTGAGAGCAAATTTTCAGGAAATCATCAGTGC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTATTCCAGAAGGAGAGTaGCAACTTCTTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLIPEGE*QLLHGQ
Trigger: TTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAAT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAATTCCAGAAGGAGAGTaGCAACTTCTTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGIPEGE*QLLHGQ
Trigger: TTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAAT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACGTGTCGGTGCCGTTaGCTTCGATTTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSTCRCR*LRFHVP
Trigger: AGGAACATGAAATCGAAGTCAACGGCACCGACACGT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCTCGGGGGAGGGTTCTaGGAAGAAACTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLLGGGF*EETCIF
Trigger: AAAAATACAAGTTTCTTCTCAGAACCCTCCCCCGAG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTACTACTGGTGGAACTTaGCATCTTTATGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLTTGGT*HLYAAR
Trigger: TCGAGCAGCATAAAGATGTCAAGTTCCACCAGTAGT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGCCAAAGTCACCTCCTaGTTCCTTCTTGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFAKVTS*FLLASL
Trigger: AAGGGAAGCAAGAAGGAAGCAGGAGGTGACTTTGGC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGTGACAAACTGGGACTaGTGGATGCGATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSVTNWD*WMRSVS
Trigger: TGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCAC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCCTGCTGTTCCTTTTTaGTCTCGCCCGGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFPAVPF*SRPGIK
Trigger: TTTTATGCCCGGGCGAGAGCAAAAAGGAACAGCAGG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAACTTGACATCTTTATaGTGCTCGATGGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGNLTSL*CSMESQ
Trigger: CTGGCTCTCCATCGAGCAGCATAAAGATGTCAAGTT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAAGTGTCCTCTGTTGTaGACAAACTGTTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLKCPLL*TNCSQE
Trigger: CTCCTGTGAACAGTTTGTCCACAACAGAGGACACTT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAAGTGTCCTCTGTTGTaGACAAACTGTTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSKCPLL*TNCSQE
Trigger: CTCCTGTGAACAGTTTGTCCACAACAGAGGACACTT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTCAGGGCTGTGCACATaGCTTCATTTTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRSGLCT*LHFCLQ
Trigger: TTGAAGACAAAAATGAAGCCATGTGCACAGCCCTGA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGTTCCATTCCAGACTaGAGCCACTCCGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFCSIPD*SHSGHH
Trigger: ATGATGACCGGAGTGGCTCCAGTCTGGAATGGAACA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAGGCTTCGTAGGATTTaGGTTTCAATTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGRLRRI*VSIPEP
Trigger: AGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAGGCTTCGTAGGATTTaGGTTTCAATTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSRLRRI*VSIPEP
Trigger: AGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAACCCAGATGTTGGTTaGTCTTCACTATCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSNPDVG*SSLSVP
Trigger: AGGCACAGATAGTGAAGACCAACCAACATCTGGGTT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGTCATCATTTTCCGATaGACTTGTGATTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIVIIFR*TCDCGY
Trigger: ATAGCCACAATCACAAGTTCATCGGAAAATGATGAC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTAGACTCTCAGTTCATTaGACGGCCTCATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSRLSVH*TASCLL
Trigger: GAGAAGACATGAGGCCGTTCAATGAACTGAGAGTCT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACAATTCCAGAGCCTTTaGAGCAAATTCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGQFQSL*SKFFCQ
Trigger: TTGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGATTTCATGTTCCTCTaGCATTCCCAGCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFDFMFL*HSQQGL
Trigger: CAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTTGACATCTTTATGCTaGTCGATGGAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLTSLC*SMESQR
Trigger: CCTCTGGCTCTCCATCGAGCAGCATAAAGATGTCAA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCATTTTTGTCTTCAATaGTTATGTGTGTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLHFCLQ*LCVWRS
Trigger: CGAGCGCCACACACATAACCATTGAAGACAAAAATG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGAAGTCAAACTACTGGTaGAACTTGACATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPKSNYW*NLTSLC
Trigger: GCATAAAGATGTCAAGTTCCACCAGTAGTTTGACTT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTATCTTGACAGAGGGCTaGGATTTGGCACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSILTEG*DLALVL
Trigger: GAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGAT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CAA 72 bp AGCAAGCCAAATAATCTCCTAAGAGAACGGCATCAGTaGATGTCTTCTTGGCAGCCTTTAAATCGCCAGATA +
Preference number: 4 (lower is better)
Translates to: SKPNNLLRERHQ*MSSWQPLNRQI
Trigger: TATCTGGCGATTTAAAGGCTGCCAAGAAGACATCAACTGATGCCGTTCTCTTAGGAGATTATTTGGCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGTCATCATTTTCCGATaGACTTGTGATTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSVIIFR*TCDCGY
Trigger: ATAGCCACAATCACAAGTTCATCGGAAAATGATGAC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTTTTCCTCTATCTGGTaGAAGAGCCAATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSFSSIW*KSQSLP
Trigger: GGGAAGAGATTGGCTCTTTCACCAGATAGAGGAAAA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGCACTGATGATTTCCTaGAAATTTGCTCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSALMIS*KFALTV
Trigger: GACCGTGAGAGCAAATTTTCAGGAAATCATCAGTGC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCGTCTGAAACGCTACTaGTTGAAGTCAAACTACTGG +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFRLKRY*LKSNYW
Trigger: CCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
3UTR CAA 72 bp ATACTCTTCAATTCACCATATCATGGAAGTAGGTGTTaGATCCTCTCGAGGAACCAACAAGATACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILFNSPYHGSRC*ILSRNQQDTWL
Trigger: CAGCCAAGTATCTTGTTGGTTCCTCGAGAGGATCAAACACCTACTTCCATGATATGGTGAATTGAAGAGTAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR TCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGAGTCAGTTGTaGTGCTTGGTACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSTQSQL*CLVLQT
Trigger: TGTTTGAAGTACCAAGCATCACAACTGACTCTGTGT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR GCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGTGTCTGGTCTATCTCTaGTCCTTCTTCGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: KIMRLEYFGISRSSHLILCLVYL*SFFDQV
Trigger: TACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACA...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR GCA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGATTTCCTGAAAATTTaGTCTCACGGTCACGATCAA +
Preference number: 4 (lower is better)
Translates to: KEKETSFITTSQQTASRFDFLKI*SHGHDQ
Trigger: TTGATCGTGACCGTGAGAGCAAATTTTCAGGAAATC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CCA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGTCAGGGCTGTGCACATaGCTTCATTTTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KIMRLEYFGISRSSHLILSGLCT*LHFCLQ
Trigger: TTGAAGACAAAAATGAAGCCATGTGCACAGCCCTGA...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CCA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTAAGTCAAACTACTGGTaGAACTTGACATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSKSNYW*NLTSLC
Trigger: GCATAAAGATGTCAAGTTCCACCAGTAGTTTGACTT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GGACTGGACGACCGAGCTGTGGCCCATGCTGGCGGCGGCTGTCAGTaGCTGCTGCAGGGCTTGGCTCTTCCTCAGGGTGCCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLDDRAVAHAGGGCQ*LLQGLALPQGARLG
Trigger: CCCCAGCCTGGCACCCTGAGGAAGAGCCAAGCCCTGCAGCAGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GATACGCAGTGCCGCTCTCACTGCGCTGCAGCTGGAGGCTCTGGCTaGCGCCCAGCCGATCCCCGAAGTGGCCACAACCAGTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: DTQCRSHCAAAGGSG*RPADPRSGHNQFLQ
Trigger: CTGCAGGAACTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGCGTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp AGCCGGGTGCCGCACATCGCTACAGCTCACTGGTCCGCCCTGGTTTaGAGGAGCCATGTCCACGGCCACGGAGGCATGAGCCAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SRVPHIATAHWSALV*RSHVHGHGGMSQEP
Trigger: AGGCTCCTGGCTCATGCCTCCGTGGCCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGGCACCCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp AGAGGATACGCAGTGCCGCTCTCACTGCGCTGCAGCTGGAGGCTCTaGCTGGCGCCCAGCCGATCCCCGAAGTGGCCACAACCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: RGYAVPLSLRCSWRL*LAPSRSPKWPQPVP
Trigger: AGGAACTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGCGTATCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TTGCTCGGTAGAGGATACGCAGTGCCGCTCTCACTGCGCTGCAGCTaGAGGCTCTGGCTGGCGCCCAGCCGATCCCCGAAGTGGCCACAA +
Preference number: 5 (lower is better)
Translates to: LLGRGYAVPLSLRCS*RLWLAPSRSPKWPQ
Trigger: TTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGCGTATCCTCTACCGAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TTGACTTTGCTCGGTAGAGGATACGCAGTGCCGCTCTCACTGCGCTaGAGCTGGAGGCTCTGGCTGGCGCCCAGCCGATCCCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LTLLGRGYAVPLSLR*SWRLWLAPSRSPKW
Trigger: CCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGCGTATCCTCTACCGAGCAAAGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GTCAGTGCCTGCTGCAGGGCTTGGCTCTTCCTCAGGGTGCCAGGCTaGGGAGGGCCTGCCGACCACTCACAGTTCAGCAGGTACTGGAGA +
Preference number: 5 (lower is better)
Translates to: VSACCRAWLFLRVPG*GGPADHSQFSRYWR
Trigger: TCTCCAGTACCTGCTGAACTGTGAGTGGTCGGCAGGCCCTCCCCAGCCTGGCACCCTGAGGAAGAGCCAAGCCCTGCAGCAGGCACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TCATGTTCCTCTGCCATTCCCAGCAAGGACTGGACGACCGAGCTGTaGCCCATGCTGGCGGCGGCTGTCAGTGCCTGCTGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SCSSAIPSKDWTTEL*PMLAAAVSACCRAW
Trigger: CCAAGCCCTGCAGCAGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCAGTCCTTGCTGGGAATGGCAGAGGAACATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp CGCTGCAGCTGGAGGCTCTGGCTGGCGCCCAGCCGATCCCCGAAGTaGCCACAACCAGTTCCTGCAGTGAAGGGACCGGTTCCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: RCSWRLWLAPSRSPK*PQPVPAVKGPVPSK
Trigger: TTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CTCGATGGAGAGCCAGAGGAGCCTGAGCTAGAGAGGGAAGCCGGGTaGCGCACATCGCTACAGCTCACTGGTCCGCCCTGGTTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LDGEPEEPELEREAG*RTSLQLTGPPWFGG
Trigger: TCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGGCACCCGGCTTCCCTCTCTAGCTCAGGCTCCTCTGGCTCTCCATCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GCTGCAGTGGCTGTGTTTGTCAGTAGCCCCTCTGCCACCGGGCAGTaGCAGGAGCGGTTCGGAGGATTGCTTTGCTGCTGGAACCTGGCG +
Preference number: 5 (lower is better)
Translates to: AAVAVFVSSPSATGQ*QERFGGLLCCWNLA
Trigger: CGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGAGGGGCTACTGACAAACACAGCCACTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp CCAGGCTGGGGAGGGCCTGCCGACCACTCACAGTTCAGCAGGTACTaGAGAATGTCACTGTGGCCCCTCAGTGCGCTGTGGACGAGTGCA +
Preference number: 5 (lower is better)
Translates to: PGWGGPADHSQFSRY*RMSLWPLSALWTSA
Trigger: TGCACTCGTCCACAGCGCACTGAGGGGCCACAGTGACATTCTCCAGTACCTGCTGAACTGTGAGTGGTCGGCAGGCCCTCCCCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp TGTCCACGGCCACGGAGGCATGAGCCAGGAGCCTCTCGGCAGCTTTaGCTTTGCTCGGTAGAGGATACGCAGTGCCGCTCTCACTGCGCT +
Preference number: 5 (lower is better)
Translates to: CPRPRRHEPGASRQL*LCSVEDTQCRSHCA
Trigger: AGCGCAGTGAGAGCGGCACTGCGTATCCTCTACCGAGCAAAGTCAAAGCTGCCGAGAGGCTCCTGGCTCATGCCTCCGTGGCCGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp TCCTCCCAGCCCTGCTCGCCTTGGATGTGGCCGGCGTTGATAGCCTaGAATATCTGCTCATCCGTCATGGGGTGGAGGGACGCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSQPCSPWMWPALIA*NICSSVMGWRDARA
Trigger: GGCTCTTGCGTCCCTCCACCCCATGACGGATGAGCAGATATTTCAGGCTATCAACGCCGGCCACATCCAAGGCGAGCAGGGCTGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp TGGCGCCCAGCCGATCCCCGAAGTGGCCACAACCAGTTCCTGCAGTaGAGGGACCGGTTCCCTCTAAATGCTGGTTTCTGCTCACGGCAG +
Preference number: 5 (lower is better)
Translates to: WRPADPRSGHNQFLQ*RDRFPLNAGFCSRQ
Trigger: CTGCCGTGAGCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CGCCTTGGGCAGCACGCTCTCCGCGGACCCAGTAGTCTCCTCTTCTaGCACTGGGGAACAGTTATCTGCCCTTCGGTCATGAAGCACTCC +
Preference number: 5 (lower is better)
Translates to: RLGQHALRGPSSLLF*HWGTVICPSVMKHS
Trigger: GGAGTGCTTCATGACCGAAGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAGACTACTGGGTCCGCGGAGAGCGTGCTGCCCAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TTGTCCCTCCTCTTAATGAGGAAGCAAGAGAGGGCCTCCATCCTCTaGTGGAAGTCCTCCCAGCCCTGCTCGCCTTGGATGTGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: LSLLLMRKQERASIL*WKSSQPCSPWMWPA
Trigger: CGCCGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGCCCTCTCTTGCTTCCTCATTAAGAGGAGGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TCCCTCCTCTTAATGAGGAAGCAAGAGAGGGCCTCCATCCTCTGCTaGAAGTCCTCCCAGCCCTGCTCGCCTTGGATGTGGCCGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SLLLMRKQERASILC*KSSQPCSPWMWPAL
Trigger: CAACGCCGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGCCCTCTCTTGCTTCCTCATTAAGAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CAGACACACCAGCTTCATGTGGCCGGCAGCAGCTGCGTAGCACAGTaGGTTCATACCGTTCTCCGACATCCCATCCAGGCAGGCGCCAAA +
Preference number: 5 (lower is better)
Translates to: QTHQLHVAGSSCVAQ*VHTVLRHPIQAGAK
Trigger: TTTGGCGCCTGCCTGGATGGGATGTCGGAGAACGGTATGAACGCACTGTGCTACGCAGCTGCTGCCGGCCACATGAAGCTGGTGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CCCTCTGCCACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTTaGTGCTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATGGA +
Preference number: 5 (lower is better)
Translates to: PSATGQCQERFGGLL*CWNLAVLSMMPING
Trigger: TCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GGGCAGCACGCTCTCCGCGGACCCAGTAGTCTCCTCTTCTGCCACTaGGGAACAGTTATCTGCCCTTCGGTCATGAAGCACTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GQHALRGPSSLLFCH*GTVICPSVMKHSLL
Trigger: CAGAAGGGAGTGCTTCATGACCGAAGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAGACTACTGGGTCCGCGGAGAGCGTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GCTGGAGCTGGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTaGAGTTGCTTGCACTCTTCTTCAACACGGGCCAGGAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: AGAGGGPCCFCCWFL*SCLHSSSTRARSLL
Trigger: CAAGAGGCTCCTGGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GCTTTGCTGCTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATaGAGTGTTGCGGGGCCTGTGTTCGGCAGTGCCACCCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: ALLLEPGGLVHDAHK*SVAGPVFGSATLHL
Trigger: CAGGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp CCATGGTCTGCTGGCGGTTCAGCTTGCTCTCCTGTCGAGAGAACATaGACGCCAGTAGAGCGTGTCCGTTCCTGGGCTCACACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PWSAGGSACSPVERT*TPVERVRSWAHTGR
Trigger: CCTTCCTGTGTGAGCCCAGGAACGGACACGCTCTACTGGCGTTCATGTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGCAGACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp GGAGGAATTCCACGGTGCTCAGGTGTCCCTCACAGGAAGCCACCATaGGAGGTGTTCGACCCTGCTTGTCACTCAGGTTCACGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GGIPRCSGVPHRKPP*EVFDPACHSGSRRS
Trigger: GCTGCGACGTGAACCTGAGTGACAAGCAGGGTCGAACACCTCTCATGGTGGCTTCCTGTGAGGGACACCTGAGCACCGTGGAATTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TCCGAGTCATTGGCTGGAGCTGGTGGGGGACCCTGCTGCTTTTGCTaGTGGTTCCTCTGGAGTTGCTTGCACTCTTCTTCAACACGGGCC +
Preference number: 5 (lower is better)
Translates to: SESLAGAGGGPCCFC*WFLWSCLHSSSTRA
Trigger: GGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TGGCCACAACCAGTTCCTGCAGTGAAGGGACCGGTTCCCTCTAAATaGTGGTTTCTGCTCACGGCAGGGGCTGCAGATACTCTACCCGGC +
Preference number: 5 (lower is better)
Translates to: WPQPVPAVKGPVPSK*WFLLTAGAADTLPG
Trigger: GCCGGGTAGAGTATCTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TCTGCCACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTTGCTaGTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: SATGQCQERFGGLLC*WNLAVLSMMPINGV
Trigger: CACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp CCTGCCGACCACTCACAGTTCAGCAGGTACTGGAGAATGTCACTGTaGCCCCTCAGTGCGCTGTGGACGAGTGCACACTGGCCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: PADHSQFSRYWRMSL*PLSALWTSAHWPFL
Trigger: TAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGTGACATTCTCCAGTACCTGCTGAACTGTGAGTGGTCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GGCTGGCGCATCCTCCTCATTATCCGAGTCATTGGCTGGAGCTGGTaGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTGGAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: GWRILLIIRVIGWSW*GTLLLLLLVPLELL
Trigger: AAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGATGCGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp AGAGGCTGGCGCATCCTCCTCATTATCCGAGTCATTGGCTGGAGCTaGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RGWRILLIIRVIGWS*WGTLLLLLLVPLEL
Trigger: CAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGATGCGCCAGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp AATGGAGTGTTGCGGGGCCTGTGTTCGGCAGTGCCACCCTGCACCTaGGTTGTACCTTTGTCTCTGATCCGAGAGTCTGGTCCTTGGACC +
Preference number: 5 (lower is better)
Translates to: NGVLRGLCSAVPPCT*VVPLSLIRESGPWT
Trigger: GGTCCAAGGACCAGACTCTCGGATCAGAGACAAAGGTACAACCCAGGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GCCACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTTGCTGCTaGAACCTGGCGGTCTTGTCCATGATGCCCATAAATGGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: ATGQCQERFGGLLCC*NLAVLSMMPINGVL
Trigger: CAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGGGACCCTGCTGCTTTaGCTGCTGGTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRGTLLL*LLVPLE
Trigger: CTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp CAGCGGCCGTCAGGGCTGTTTCTCCCCACAACGTGTCGGTGCCGTTaGCTTCGATTTCATGTTCCTCTGCCATTCCCAGCAAGGACTGGA +
Preference number: 5 (lower is better)
Translates to: QRPSGLFLPTTCRCR*LRFHVPLPFPARTG
Trigger: TCCAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATCGAAGTCAACGGCACCGACACGTTGTGGGGAGAAACAGCCCTGACGGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp CTGCTCTGTGGGGATGCTGACCTGCCTTTGGACTGTAATCCCTCTTaGAGGTTGCGGATGTATGGGGAAGGGACAGACGGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLCGDADLPLDCNPS*RLRMYGEGTDGGGW
Trigger: CCAGCCACCACCGTCTGTCCCTTCCCCATACATCCGCAACCTTCAAGAGGGATTACAGTCCAAAGGCAGGTCAGCATCCCCACAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GCTGGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTGGAGTTaGTTGCACTCTTCTTCAACACGGGCCAGGAGCCTCTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: AGGGPCCFCCWFLWS*LHSSSTRARSLLIS
Trigger: GGAAATCAAGAGGCTCCTGGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GTGGGGATGCTGACCTGCCTTTGGACTGTAATCCCTCTTGAAGGTTaGGGATGTATGGGGAAGGGACAGACGGTGGTGGCTGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: VGMLTCLWTVIPLEG*GCMGKGQTVVAGIW
Trigger: CCAGATCCCAGCCACCACCGTCTGTCCCTTCCCCATACATCCGCAACCTTCAAGAGGGATTACAGTCCAAAGGCAGGTCAGCATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CCCATAAATGGAGTGTTGCGGGGCCTGTGTTCGGCAGTGCCACCCTaGACCTGGGTTGTACCTTTGTCTCTGATCCGAGAGTCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: PINGVLRGLCSAVPP*TWVVPLSLIRESGP
Trigger: AGGACCAGACTCTCGGATCAGAGACAAAGGTACAACCCAGGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATTTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp ACCACCTTAGAAGCGAGGTATTTCACCGCATCCTCTCTCGGTCTCTaGCTGTCAGCAGTCCCAGGCCCAGCAGGTGTTCTGGTCACACTG +
Preference number: 5 (lower is better)
Translates to: TTLEARYFTASSLGL*LSAVPGPAGVLVTL
Trigger: CAGTGTGACCAGAACACCTGCTGGGCCTGGGACTGCTGACAGCCAGAGACCGAGAGAGGATGCGGTGAAATACCTCGCTTCTAAGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp AGAATGTCACTGTGGCCCCTCAGTGCGCTGTGGACGAGTGCACACTaGCCCTTCTTATCCAAGTGGTCCACCCTTGCCCCCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RMSLWPLSALWTSAH*PFLSKWSTLAPFLM
Trigger: CATCAAGAAGGGGGCAAGGGTGGACCACTTGGATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGTGACATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GGTTGCGGATGTATGGGGAAGGGACAGACGGTGGTGGCTGGGATCTaGGAGTCGGGGAAATGGACTCTTCCTGTGAAGAGGTGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GCGCMGKGQTVVAGI*ESGKWTLPVKRCLP
Trigger: AGGAAGACACCTCTTCACAGGAAGAGTCCATTTCCCCGACTCCCAGATCCCAGCCACCACCGTCTGTCCCTTCCCCATACATCCGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp CCACAACCAGTTCCTGCAGTGAAGGGACCGGTTCCCTCTAAATGCTaGTTTCTGCTCACGGCAGGGGCTGCAGATACTCTACCCGGCATC +
Preference number: 5 (lower is better)
Translates to: PQPVPAVKGPVPSKC*FLLTAGAADTLPGI
Trigger: GATGCCGGGTAGAGTATCTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGAGCGGTTCGGAGGATaGCTTTGCTGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRERFGG*LCCWNL
Trigger: CAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp GCAGCTCGGTTCATTATCAGCCTTCGCTTCAGTCGCACTGGGCTCTaGGGGCTTGGACCCTTCTCCGAACGGGATCATAACTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AARFIISLRFSRTGL*GLGPFSERDHNWIS
Trigger: GGAGATCCAGTTATGATCCCGTTCGGAGAAGGGTCCAAGCCCTCAGAGCCCAGTGCGACTGAAGCGAAGGCTGATAATGAACCGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CTTCTTGATGAGCAGACACACCAGCTTCATGTGGCCGGCAGCAGCTaGGTAGCACAGTGCGTTCATACCGTTCTCCGACATCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LLDEQTHQLHVAGSS*VAQCVHTVLRHPIQ
Trigger: CTGGATGGGATGTCGGAGAACGGTATGAACGCACTGTGCTACGCAGCTGCTGCCGGCCACATGAAGCTGGTGTGTCTGCTCATCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CTCAGGTGTCCCTCACAGGAAGCCACCATGAGAGGTGTTCGACCCTaGTTGTCACTCAGGTTCACGTCGCAGCCGCGATCCAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: LRCPSQEATMRGVRP*LSLRFTSQPRSKSN
Trigger: ATTGCTTTTGGATCGCGGCTGCGACGTGAACCTGAGTGACAAGCAGGGTCGAACACCTCTCATGGTGGCTTCCTGTGAGGGACACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GGTCCTGAGTGGGATCTGAGGATTTGGGTGACAAACTGGGACTGCTaGATGCGATCTGTCTCATGCGGCTTCCGTGACAGCTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: GPEWDLRIWVTNWDC*MRSVSCGFRDSSVP
Trigger: TGGCACTGAGCTGTCACGGAAGCCGCATGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCACTCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGAGCCTGCAGATGGCTaGAGGAGACTCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWREPADG*RRLQSS
Trigger: AGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCTC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCACTGGTCCGCCCTGGTTaGGAGGAGCCATGTCCACGG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPLVRPG*EEPCPR
Trigger: CCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAG...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp TCTCCGACATCCCATCCAGGCAGGCGCCAAATTCCAGAAGGAGAGTaGCAACTTCTTCATGGCCAAGGTGAGACTGGACGCACAGGATGG +
Preference number: 5 (lower is better)
Translates to: SPTSHPGRRQIPEGE*QLLHGQGETGRTGW
Trigger: CCATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAATTTGGCGCCTGCCTGGATGGGATGTCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp CTTCACCTGAGCCCCATTGTGGACACCCATGCTCAGGGGAGGAACTaGACACGGTTTGGCTTGGCTACAGTATCCTCCTGGCTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: LHLSPIVDTHAQGRN*TRFGLATVSSWLES
Trigger: ACTCTCAAGCCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATGGGGCTCAGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GAAGGTCCTGAGTGGGATCTGAGGATTTGGGTGACAAACTGGGACTaGTGGATGCGATCTGTCTCATGCGGCTTCCGTGACAGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: EGPEWDLRIWVTNWD*WMRSVSCGFRDSSV
Trigger: CACTGAGCTGTCACGGAAGCCGCATGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCACTCAGGACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CAGGTCCAAGGGAGTACGGCCGTTTTTGTCTGTCTGGTCTATCTCTaGTCCTTCTTCGACCAGGTACTGGACCACTGCCCTGTGACCCTT +
Preference number: 5 (lower is better)
Translates to: QVQGSTAVFVCLVYL*SFFDQVLDHCPVTL
Trigger: AAGGGTCACAGGGCAGTGGTCCAGTACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACAGACAAAAACGGCCGTACTCCCTTGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TTATCCGAGTCATTGGCTGGAGCTGGTGGGGGACCCTGCTGCTTTTaGTGCTGGTTCCTCTGGAGTTGCTTGCACTCTTCTTCAACACGG +
Preference number: 5 (lower is better)
Translates to: LSESLAGAGGGPCCF*CWFLWSCLHSSSTR
Trigger: CCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp TCCTCCTCATTATCCGAGTCATTGGCTGGAGCTGGTGGGGGACCCTaGTGCTTTTGCTGCTGGTTCCTCTGGAGTTGCTTGCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSSLSESLAGAGGGP*CFCCWFLWSCLHSS
Trigger: AGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CTACAGTATCCTCCTGGCTTGAGAGTGGGTTTCTCAGAGTTAGACTaGAGGCCAGCTGCAGTGGCTGTGTTTGTCAGTAGCCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LQYPPGLRVGFSELD*RPAAVAVFVSSPSA
Trigger: GGCAGAGGGGCTACTGACAAACACAGCCACTGCAGCTGGCCTGCAGTCTAACTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGTGGGATCTGAGGATTaGGGTGACAAACTGGGACTG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRVGSED*GDKLGL
Trigger: CAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCAC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAGGGCGGCGTCGGCCTaGCCATTCAGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPRAASA*PFREML
Trigger: CAACATCTCCCTGAATGGCAAGGCCGACGCCGCCCT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACTGGTCCGCCCTGGTTaGGAGGAGCCATGTCCACGG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKLVRPG*EEPCPR
Trigger: CCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGCTGGGATTTGGCACTaGTTCTCTTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRAGIWH*FSSSSF
Trigger: GAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGACAGAGGGCTGGGATTaGGCACTTGTTCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRTEGWD*ALVLFQ
Trigger: CTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp CAGCCCCTCTGTGCTGTAACCGATCCACAGAGCCTGCAGATGGCTTaGGGAGACTCCAGTCTTCTTACTGAGGCCCTTGAAAATGTGTGC +
Preference number: 5 (lower is better)
Translates to: QPLCAVTDPQSLQMA*GDSSLLTEALENVC
Trigger: GCACACATTTTCAAGGGCCTCAGTAAGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCTCTGTGGATCGGTTACAGCACAGAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp CTCTGTAGGCAGCCAGCTGGTGGGACCGGCACAGCAAAGCAGCAATaGTGTGCACAAACTCAGGTACCAGACATGTGTAAGTGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LCRQPAGGTGTAKQQ*CAQTQVPDMCKCCQ
Trigger: CTGACAACACTTACACATGTCTGGTACCTGAGTTTGTGCACAGCATTGCTGCTTTGCTGTGCCGGTCCCACCAGCTGGCTGCCTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGTCTCGCAGGGACTTTaGCTGGCTGCCGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPVSQGL*LAAVLL
Trigger: CAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGAC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAATGCTGGCGGTTCAGCTaGCTCTCCTGTCGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSECWRFS*LSCREN
Trigger: GTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGCA...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGGGAACCCCTCTCCTGTaGGCCCGAGACACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SKCFLLLRVTNQGREPREGTPLL*ARDTAA
Trigger: AGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTCC...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGGAACCCCTCTCCTGTaGGCCCGAGACACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFGTPLL*ARDTAA
Trigger: AGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTCC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGGAACCCCTCTCCTGTaGGCCCGAGACACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIGTPLL*ARDTAA
Trigger: AGCTGCCGTGTCTCGGGCCAACAGGAGAGGGGTTCC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGAAAGAGCAGCACCTTTaGAGAGGAGGAATTCCACGG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRKEQHL*RGGIPR
Trigger: CCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTTT...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCTGGTTCCTCTGGAGTaGCTTGCACTCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRLVPLE*LALFFN
Trigger: GTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGGGACCCTGCTGCTTTaGCTGCTGGTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPGTLLL*LLVPLE
Trigger: CTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGGTCTCTCTCAGGGACTaGCTGATTCCTGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SAIAGILLQAVITHRSVRVSLRD*LIPALL
Trigger: GAGCAGGGCAGGAATCAGCAAGTCCCTGAGAGAGAC...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGGAACCCAGATGTTGGTaGGTCTTCACTATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWREPRCW*VFTICA
Trigger: GGCACAGATAGTGAAGACCAACCAACATCTGGGTTC...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGTTCGGAGGATTGCTTaGCTGCTGGAACCTGGCGGT +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEVRRIA*LLEPGG
Trigger: ACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAAC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGAGCGGTTCGGAGGATaGCTTTGCTGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEERFGG*LCCWNL
Trigger: CAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACTGCAGTGGCTGTGTTaGTCAGTAGCCCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSELQWLC*SVAPLP
Trigger: TGGCAGAGGGGCTACTGACAAACACAGCCACTGCAG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCTGCAGTGGCTGTGTTaGTCAGTAGCCCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SAIAGILLQAVITHRSVRLQWLC*SVAPLP
Trigger: TGGCAGAGGGGCTACTGACAAACACAGCCACTGCAG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp GGTCTTCACTATCTGTGCCTGTTTGGTAGGCTGCATAACCAAGCCTaGCTGGGCTACAGTCTCTCTCAGGGACTTGCTGATTCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GLHYLCLFGRLHNQA*LGYSLSQGLADSCP
Trigger: AGGGCAGGAATCAGCAAGTCCCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACAGATAGTGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp CCGAGTCCTTCCCGAGGGAACTTCCGCAAGGCATACTGGTACCTCTaGGCTGCCTCCTTCATCTTCCCTTTCTTGTACATCACATTTCCT +
Preference number: 5 (lower is better)
Translates to: PSPSRGNFRKAYWYL*AASFIFPFLYITFP
Trigger: AGGAAATGTGATGTACAAGAAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAAGTTCCCTCGGGAAGGACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp ATGTCTTCTCCGAGTCCTTCCCGAGGGAACTTCCGCAAGGCATACTaGTACCTCTGGGCTGCCTCCTTCATCTTCCCTTTCTTGTACATC +
Preference number: 5 (lower is better)
Translates to: MSSPSPSRGNFRKAY*YLWAASFIFPFLYI
Trigger: GATGTACAAGAAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAAGTTCCCTCGGGAAGGACTCGGAGAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TTCACTATCTGTGCCTGTTTGGTAGGCTGCATAACCAAGCCTGACTaGGCTACAGTCTCTCTCAGGGACTTGCTGATTCCTGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FTICACLVGCITKPD*ATVSLRDLLIPALL
Trigger: GAGCAGGGCAGGAATCAGCAAGTCCCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACAGATAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGTCTCGCAGGGACTTTaGCTGGCTGCCGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKVSQGL*LAAVLL
Trigger: CAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGAC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTCCATTCAGGGAGATGTaGCTGAGGATGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SICDQRDPLVHTARPVHFPFREM*LRMSWL
Trigger: CAGCCAGGACATCCTCAGCAACATCTCCCTGAATGG...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAGGGCGGCGTCGGCCTaGCCATTCAGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIRAASA*PFREML
Trigger: CAACATCTCCCTGAATGGCAAGGCCGACGCCGCCCT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAGAGTTTCACAGCCTCTaGCAGGTCAGCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPEFHSL*QVSQSC
Trigger: GCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACTC...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTAGCCTCTCGGCAGCTTaGACTTTGCTCGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: SICDQRDPLVHTARPVHFSLSAA*TLLGRG
Trigger: TCCTCTACCGAGCAAAGTCAAAGCTGCCGAGAGGCT...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCTGGTCCGCCCTGGTTaGGAGGAGCCATGTCCACGG +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSLVRPG*EEPCPR
Trigger: CCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp CAGTGCGGCAACCAGCATGATGGAGCGTACAGAGAACATGCAGAGAGATGGCGGCTGAAACGCTACTGCTaGAAGTCAAACTACTGGTGG +
Preference number: 5 (lower is better)
Translates to: QCGNQHDGAYREHAERWRLKRYC*KSNYWW
Trigger: CCACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAG...CCGCCATCTCTCTGCATGTTCTCTGTACGCTCCATCATGCTGGTTGCCGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GGGCTGTGCACATGGCTTCATTTTTGTCTTCAATGGTTATGTGTGTaGCGCTCGGGATCCCCTCTCCCAGTAGAAATCCCAGCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: GLCTWLHFCLQWLCV*RSGSPLPVEIPALS
Trigger: TGACAAGGCTGGGATTTCTACTGGGAGAGGGGATCCCGAGCGCCACACACATAACCATTGAAGACAAAAATGAAGCCATGTGCACAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp GAGATGAGGAACCCCCTTAGTTATCCTGTTATCTTGACAGAGGGCTaGGATTTGGCACTTGTTCTCTTCCAGCTCCTTCACCTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: EMRNPLSYPVILTEG*DLALVLFQLLHLSP
Trigger: GGGGCTCAGGTGAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGATAACAGGATAACTAAGGGGGTTCCTCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCCTTGTCAACAGTTCTaGAGCTGCTGGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: SAIAGILLQAVITHRSVRPCQQF*SCWRAA
Trigger: AGCTGCTCTCCAGCAGCTCAAGAACTGTTGACAAGG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAACAAGGGCTGATGCCTaGACTCAGGGCTGTGCACAT +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPTRADA*TQGCAH
Trigger: ATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTGT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGTCGCTGCAACTGAGTaGGGCCGTGGCATTATGAGC +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPVAATE*GRGIMS
Trigger: GCTCATAATGCCACGGCCCAACTCAGTTGCAGCGAC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAGGGCGGCGTCGGCCTaGCCATTCAGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSRAASA*PFREML
Trigger: CAACATCTCCCTGAATGGCAAGGCCGACGCCGCCCT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGCTGGCGGTTCAGCTaGCTCTCCTGTCGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPCWRFS*LSCREN
Trigger: GTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGCA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGACCCTTGCCCCCTTCTaGATGAGCAGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPTLAPF*MSRHTS
Trigger: GCTGGTGTGTCTGCTCATCAAGAAGGGGGCAAGGGT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGAGTTTCACAGCCTCTaGCAGGTCAGCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKEFHSL*QVSQSC
Trigger: GCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACTC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATCATTATCCGAGTCATaGGCTGGAGCTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPSLSES*AGAGGG
Trigger: TCCCCCACCAGCTCCAGCCAATGACTCGGATAATGA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCCCGGAACCCAGATGTaGGTTGGTCTTCACTATCTG +
Preference number: 5 (lower is better)
Translates to: SAIAGILLQAVITHRSVRPGTQM*VGLHYL
Trigger: CAGATAGTGAAGACCAACCAACATCTGGGTTCCGGG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGGTTCGGAGGATTGCTTaGCTGCTGGAACCTGGCGGT +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPVRRIA*LLEPGG
Trigger: ACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAAC...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACAGTATCCTCCTGGCTaGAGAGTGGGTTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEQYPPG*RVGFSE
Trigger: CTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTG...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 90 bp GCGCCAAATTCCAGAAGGAGAGTGACAACTTCTTCATGGCCAAGGTaGGACTGGACGCACAGGATGGGGGCATTGTTTAACACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: APNSRRRVTTSSWPR*DWTHRMGALFNTSV
Trigger: GACAGAAGTGTTAAACAATGCCCCCATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAATTTGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 90 bp GCAAACCGTGCTTTAACTTCCGGTGCCCTACCTCCAGCCGTATTGTaGCAGGGCAATCTAATTGATGTCCGAAGAGGAGCATTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: ANRALTSGALPPAVL*QGNLIDVRRGAFLC
Trigger: ACAGAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCACGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS CCA 90 bp GTGGGCTTCCGTACTGACATGAAGTGGCTGCTTAGAGACGCCCTCTaGGTAGAGATGAGGAACCCCCTTAGTTATCCTGTTATCTTGACA +
Preference number: 5 (lower is better)
Translates to: VGFRTDMKWLLRDAL*VEMRNPLSYPVILT
Trigger: TGTCAAGATAACAGGATAACTAAGGGGGTTCCTCATCTCTACCCAGAGGGCGTCTCTAAGCAGCCACTTCATGTCAGTACGGAAGCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGACAAGGGCTGATGCCTaGACTCAGGGCTGTGCACAT +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPTRADA*TQGCAH
Trigger: ATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTGT...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATTGCTGGCTGCCGTCTaGCTGACACAGCTATTCAAG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPLLAAV*LTQLFK
Trigger: CTTGAATAGCTGTGTCAGCAAGACGGCAGCCAGCAA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACCATTCAGGGAGATGTaGCTGAGGATGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKPFREM*LRMSWL
Trigger: CAGCCAGGACATCCTCAGCAACATCTCCCTGAATGG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTGCTGGCGGTTCAGCTaGCTCTCCTGTCGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSICWRFS*LSCREN
Trigger: GTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGCA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAACCTGCCAATGGCCTaGGCGGGCGGCACAAAACAG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLNLPMA*AGGTKQ
Trigger: CTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGTT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAACCTGCCAATGGCCTaGGCGGGCGGCACAAAACAG +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGNLPMA*AGGTKQ
Trigger: CTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGTT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCATTATCCGAGTCATaGGCTGGAGCTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSLSES*AGAGGG
Trigger: TCCCCCACCAGCTCCAGCCAATGACTCGGATAATGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCGTCTCTCTCAGGGACTaGCTGATTCCTGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSIVSLRD*LIPALL
Trigger: GAGCAGGGCAGGAATCAGCAAGTCCCTGAGAGAGAC...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTGAACCCAGATGTTGGTaGGTCTTCACTATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SICDQRDPLVHTARPVHFEPRCW*VFTICA
Trigger: GGCACAGATAGTGAAGACCAACCAACATCTGGGTTC...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS TCA 90 bp TTCCGGTGCCCTACCTCCAGCCGTATTGTGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATTTCTCTGTCCGTCCAAATAACTCAA +
Preference number: 5 (lower is better)
Translates to: FRCPTSSRIVPGQSN*CPKRSISLSVQITQ
Trigger: TTGAGTTATTTGGACGGACAGAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGGGCACCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS TCA 90 bp GGGAGCAAACCGTGCTCCAGCCGTATTGTGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATTTCTCTGTCCGTCCAAATAACTCAA +
Preference number: 5 (lower is better)
Translates to: GSKPCSSRIVPGQSN*CPKRSISLSVQITQ
Trigger: TTGAGTTATTTGGACGGACAGAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGCACGGTTTGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112568.8
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCCTTGTCAACAGTTCTaGAGCTGCTGGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPPCQQF*SCWRAA
Trigger: AGCTGCTCTCCAGCAGCTCAAGAACTGTTGACAAGG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCCCATTCAGGGAGATGTaGCTGAGGATGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFPFREM*LRMSWL
Trigger: CAGCCAGGACATCCTCAGCAACATCTCCCTGAATGG...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTCAGAACATGCGGGTTTaGTCCCTCCTCTTAATGAGG +
Preference number: 5 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPQNMRV*SLLLMR
Trigger: CCTCATTAAGAGGAGGGACAAAACCCGCATGTTCTG...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAACCCTTGCCCCCTTCTaGATGAGCAGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGTLAPF*MSRHTS
Trigger: GCTGGTGTGTCTGCTCATCAAGAAGGGGGCAAGGGT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTGGAGTACGGCCGTTTTaGTCTGTCTGGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPGVRPF*SVWSIS
Trigger: AGAGATAGACCAGACAGACAAAAACGGCCGTACTCC...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGAGTTTCACAGCCTCTaGCAGGTCAGCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSEFHSL*QVSQSC
Trigger: GCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACTC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTTCCTCTGGAGTTGCTaGCACTCTTCTTCAACACGG +
Preference number: 5 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPFLWSC*HSSSTR
Trigger: CCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGTCTCTCTCAGGGACTaGCTGATTCCTGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGVSLRD*LIPALL
Trigger: GAGCAGGGCAGGAATCAGCAAGTCCCTGAGAGAGAC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGTTCGGAGGATTGCTTaGCTGCTGGAACCTGGCGGT +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGVRRIA*LLEPGG
Trigger: ACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAAC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTGAGCGGTTCGGAGGATaGCTTTGCTGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLERFGG*LCCWNL
Trigger: CAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTC...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACAGTATCCTCCTGGCTaGAGAGTGGGTTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKQYPPG*RVGFSE
Trigger: CTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TGCACCTGGGTTGTACCTTTGTCTCTGATCCGAGAGTCTGGTCCTTaGACCTTGAATCCGTCTGAAACGCTACTGCTTGAAGTCAAACTA +
Preference number: 5 (lower is better)
Translates to: CTWVVPLSLIRESGP*TLNPSETLLLEVKL
Trigger: TAGTTTGACTTCAAGCAGTAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGAGACAAAGGTACAACCCAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GGGCTGTGTAAGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAAGATAAGTGTCCTCTGTaGTGGACAAACTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: GLCKEIKTATQTSRVLSEDKCPL*WTNCSQ
Trigger: CTGTGAACAGTTTGTCCACAACAGAGGACACTTATC...TTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCTTACACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTACAAGGGCTGATGCCTaGACTCAGGGCTGTGCACAT +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSTRADA*TQGCAH
Trigger: ATGTGCACAGCCCTGAGTCAAGGCATCAGCCCTTGT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGTCTCGCAGGGACTTTaGCTGGCTGCCGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFVSQGL*LAAVLL
Trigger: CAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGAC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGTGGGATCTGAGGATTaGGGTGACAAACTGGGACTG +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRVGSED*GDKLGL
Trigger: CAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCAC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCATTCTTACTGAGGCCCTaGAAAATGTGTGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPFLLRP*KMCAFR
Trigger: CCTGAAGGCACACATTTTCAAGGGCCTCAGTAAGAA...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGAGCCTGCAGATGGCTaGAGGAGACTCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGEPADG*RRLQSS
Trigger: AGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCTC...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAACGTGTCGGTGCCGTaGACTTCGATTTCATGTTCC +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKNVSVP*TSISCS
Trigger: GGAACATGAAATCGAAGTCAACGGCACCGACACGTT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTAACCTGCCAATGGCCTaGGCGGGCGGCACAAAACAG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSNLPMA*AGGTKQ
Trigger: CTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGTT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAAAAGAGCAGCACCTTTaGAGAGGAGGAATTCCACGG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKKEQHL*RGGIPR
Trigger: CCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTTT...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGGAGTACGGCCGTTTTaGTCTGTCTGGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKGVRPF*SVWSIS
Trigger: AGAGATAGACCAGACAGACAAAAACGGCCGTACTCC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAACTGGTTCCTCTGGAGTaGCTTGCACTCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKLVPLE*LALFFN
Trigger: GTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAG...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGGACCCTGCTGCTTTaGCTGCTGGTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFGTLLL*LLVPLE
Trigger: CTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAAGAACCCAGATGTTGGTaGGTCTTCACTATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKEPRCW*VFTICA
Trigger: GGCACAGATAGTGAAGACCAACCAACATCTGGGTTC...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTAGCCTCTCGGCAGCTTaGACTTTGCTCGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSSLSAA*TLLGRG
Trigger: TCCTCTACCGAGCAAAGTCAAAGCTGCCGAGAGGCT...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAGCCTCTCGGCAGCTTaGACTTTGCTCGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGSLSAA*TLLGRG
Trigger: TCCTCTACCGAGCAAAGTCAAAGCTGCCGAGAGGCT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCTGGTCCTTGGACCTaGAATCCGTCTGAAACGCTA +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSGPWT*NPSETL
Trigger: TAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGCAGTATCCTCCTGGCTaGAGAGTGGGTTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SKCFLLLRVTNQGREPREQYPPG*RVGFSE
Trigger: CTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTG...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGCTGGGATTTGGCACTaGTTCTCTTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRAGIWH*FSSSSF
Trigger: GAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCGCTGGGATTTGGCACTaGTTCTCTTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFAGIWH*FSSSSF
Trigger: GAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGC...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTGGGCTTTCCACATACTaGGGCTTCCTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSGLSTY*GFLTGP
Trigger: AGGTCCCGTCAGGAAGCCCAAGTATGTGGAAAGCCC...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGGCTTTCCACATACTaGGGCTTCCTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFGLSTY*GFLTGP
Trigger: AGGTCCCGTCAGGAAGCCCAAGTATGTGGAAAGCCC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGTCGCTGCAACTGAGTaGGGCCGTGGCATTATGAGC +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFVAATE*GRGIMS
Trigger: GCTCATAATGCCACGGCCCAACTCAGTTGCAGCGAC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGTGGGATCTGAGGATTaGGGTGACAAACTGGGACTG +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSVGSED*GDKLGL
Trigger: CAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCAC...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTCGTCTAGGGAAAGCTaGACAAATGGCAGTGCACTG +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRSSRES*TNGSAL
Trigger: CAGTGCACTGCCATTTGTCAAGCTTTCCCTAGACGA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATTCTTACTGAGGCCCTaGAAAATGTGTGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKFLLRP*KMCAFR
Trigger: CCTGAAGGCACACATTTTCAAGGGCCTCAGTAAGAA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCAACGTGTCGGTGCCGTaGACTTCGATTTCATGTTCC +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSINVSVP*TSISCS
Trigger: GGAACATGAAATCGAAGTCAACGGCACCGACACGTT...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCAACGTGTCGGTGCCGTaGACTTCGATTTCATGTTCC +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFNVSVP*TSISCS
Trigger: GGAACATGAAATCGAAGTCAACGGCACCGACACGTT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCCTGGTTCCTCTGGAGTaGCTTGCACTCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSILVPLE*LALFFN
Trigger: GTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAG...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGACCCGGAACCCAGATGTaGGTTGGTCTTCACTATCTG +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGPGTQM*VGLHYL
Trigger: CAGATAGTGAAGACCAACCAACATCTGGGTTCCGGG...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCTGAAACGCTACTGCTaGAAGTCAAACTACTGGTGG +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPLKRYC*KSNYWW
Trigger: CCACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAGCATCTCTGGTCCTTGGACCTaGAATCCGTCTGAAACGCTA +
Preference number: 5 (lower is better)
Translates to: AAARFLFVQNLNDVHRSISGPWT*NPSETL
Trigger: TAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGA...GATGCTCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTGGAACCTGGCGGTCTaGTCCATGATGCCCATAAAT +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRWNLAV*SMMPIN
Trigger: ATTTATGGGCATCATGGACAAGACCGCCAGGTTCCA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTGGAACCTGGCGGTCTaGTCCATGATGCCCATAAAT +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFWNLAV*SMMPIN
Trigger: ATTTATGGGCATCATGGACAAGACCGCCAGGTTCCA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCTGCAGTGGCTGTGTTaGTCAGTAGCCCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFLQWLC*SVAPLP
Trigger: TGGCAGAGGGGCTACTGACAAACACAGCCACTGCAG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACATTAGAGGCTTGTTTTGGGGACCGTCACTGTCCAGAACACTTTCGGAACCAAGTTATCCTGTTATCTaGACAGAGGGCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: DIRGLFWGPSLSRTLSEPSYPVI*TEGWDL
Trigger: CAAATCCCAGCCCTCTGTCAAGATAACAGGATAACT...TGGTTCCGAAAGTGTTCTGGACAGTGACGGTCCCCAAAACAAGCCTCTAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGATAATTCCACTGTCCTaGCTTTCCAGGGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRIIPLS*LSRVEL
Trigger: CAGTTCCACCCTGGAAAGCAAGGACAGTGGAATTAT...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCATAATTCCACTGTCCTaGCTTTCCAGGGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFIIPLS*LSRVEL
Trigger: CAGTTCCACCCTGGAAAGCAAGGACAGTGGAATTAT...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCAGAACATGCGGGTTTaGTCCCTCCTCTTAATGAGG +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSQNMRV*SLLLMR
Trigger: CCTCATTAAGAGGAGGGACAAAACCCGCATGTTCTG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGAGCCTGCAGATGGCTaGAGGAGACTCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFEPADG*RRLQSS
Trigger: AGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCTC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCACAGGATGGGGGCATaGTTTAACACTTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLHRMGA*FNTSVL
Trigger: CAGGACAGAAGTGTTAAACAATGCCCCCATCCTGTG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTCACAGGATGGGGGCATaGTTTAACACTTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: IKCHCGYTVTSRDNASFSHRMGA*FNTSVL
Trigger: CAGGACAGAAGTGTTAAACAATGCCCCCATCCTGTG...ACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTCCAAACCAAAGTCGTTaGTTTTCCTTCGGCATCGCG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLPNQSR*FSFGIA
Trigger: CGCGATGCCGAAGGAAAACAAACGACTTTGGTTTGG...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTTTCCTCTGGAGTTGCTaGCACTCTTCTTCAACACGG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLFLWSC*HSSSTR
Trigger: CCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAA...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCATTATCCGAGTCATaGGCTGGAGCTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFSLSES*AGAGGG
Trigger: TCCCCCACCAGCTCCAGCCAATGACTCGGATAATGA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 90 bp TGTTCCTTTTTGCTCTCGCCCGGGCATAAAAGGCTTCGTAGGATTTaGGTTTCAATTCCAGAGCCTTTGAAGCAAATTCTTCTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: CSFLLSPGHKRLRRI*VSIPEPLKQILLPN
Trigger: GTTTGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCTTTTATGCCCGGGCGAGAGCAAAAAGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp TCAAAGTGCTTTTTACTCCTTAGGGTGACAAATCAAGGCAGAGAGCCACGAGAGGATAAGTGTCCTCTGTaGTGGACAAACTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: SKCFLLLRVTNQGREPREDKCPL*WTNCSQ
Trigger: CTGTGAACAGTTTGTCCACAACAGAGGACACTTATC...CTCTCGTGGCTCTCTGCCTTGATTTGTCACCCTAAGGAGTAAAAAGCACTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGGATAAGTGTCCTCTGTaGTGGACAAACTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRDKCPL*WTNCSQ
Trigger: CTGTGAACAGTTTGTCCACAACAGAGGACACTTATC...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGTATCTGTGACCAGCGAGACCCATTAGTCCACACTGCTCGTCCCGTGCATTTTCACATGGCTTCATTTTaGTCTTCAATGGTTATGTGT +
Preference number: 5 (lower is better)
Translates to: SICDQRDPLVHTARPVHFHMASF*SSMVMC
Trigger: ACACATAACCATTGAAGACAAAAATGAAGCCATGTG...AAAATGCACGGGACGAGCAGTGTGGACTAATGGGTCTCGCTGGTCACAGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp AGTGCCATTGCGGGTATACTGTTACAAGCCGTGATAACGCATCGTTCAGTGCGGCACATGGCTTCATTTTaGTCTTCAATGGTTATGTGT +
Preference number: 5 (lower is better)
Translates to: SAIAGILLQAVITHRSVRHMASF*SSMVMC
Trigger: ACACATAACCATTGAAGACAAAAATGAAGCCATGTG...CCGCACTGAACGATGCGTTATCACGGCTTGTAACAGTATACCCGCAATGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTTGCTGGCTGCCGTCTaGCTGACACAGCTATTCAAG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLLAAV*LTQLFK
Trigger: CTTGAATAGCTGTGTCAGCAAGACGGCAGCCAGCAA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTATAATTCCACTGTCCTaGCTTTCCAGGGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLIIPLS*LSRVEL
Trigger: CAGTTCCACCCTGGAAAGCAAGGACAGTGGAATTAT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGAAATCAAAACTGCCACCCAGACCTCAAGGGTCCTGTCTGAACACTTTCCCTTTCATCTTCCCTTTCTaGTACATCACATTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RKSKLPPRPQGSCLNTFPFIFPF*YITFPS
Trigger: GGAAGGAAATGTGATGTACAAGAAAGGGAAGATGAA...AGGGAAAGTGTTCAGACAGGACCCTTGAGGTCTGGGTGGCAGTTTTGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AACGGCCTAGCTGTTTGTACAAAGCCCTCTGCACACAGGAACAGACACACTAAATCAATTCCAGAGCCTTaGAAGCAAATTCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: NGLAVCTKPSAHRNRHTKSIPEP*KQILLP
Trigger: TGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTGA...TTTAGTGTGTCTGTTCCTGTGTGCAGAGGGCTTTGTACAAACAGCTAGGCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACAGAGGGCTGGGATTaGGCACTTGTTCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSTEGWD*ALVLFQ
Trigger: CTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTCGTCTAGGGAAAGCTaGACAAATGGCAGTGCACTG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSSSRES*TNGSAL
Trigger: CAGTGCACTGCCATTTGTCAAGCTTTCCCTAGACGA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCACAGGATGGGGGCATaGTTTAACACTTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFHRMGA*FNTSVL
Trigger: CAGGACAGAAGTGTTAAACAATGCCCCCATCCTGTG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTAAAGAGCAGCACCTTTaGAGAGGAGGAATTCCACGG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSKEQHL*RGGIPR
Trigger: CCGTGGAATTCCTCCTCTCAAAAGGTGCTGCTCTTT...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCGGAGTACGGCCGTTTTaGTCTGTCTGGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFGVRPF*SVWSIS
Trigger: AGAGATAGACCAGACAGACAAAAACGGCCGTACTCC...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGTTCATCTTCCCTTTCTaGTACATCACATTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPFIFPF*YITFPS
Trigger: GGAAGGAAATGTGATGTACAAGAAAGGGAAGATGAA...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCCCAAACCAAAGTCGTTaGTTTTCCTTCGGCATCGCG +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFPNQSR*FSFGIA
Trigger: CGCGATGCCGAAGGAAAACAAACGACTTTGGTTTGG...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GACAGGTTTGACTTAGGGATCTGTAACTTAAACACCCTCCCTCCCCATCTTTTCTCAATTCCAGAGCCTTaGAAGCAAATTCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: DRFDLGICNLNTLPPHLFSIPEP*KQILLP
Trigger: TGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTGA...GAAAAGATGGGGAGGGAGGGTGTTTAAGTTACAGATCCCTAAGTCAAACCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTCCTCTGGAGTTGCTaGCACTCTTCTTCAACACGG +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFFLWSC*HSSSTR
Trigger: CCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTTCTGGTCCTTGGACCTaGAATCCGTCTGAAACGCTA +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSSGPWT*NPSETL
Trigger: TAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGA...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp ATGACGCCGCGGCAAGGTTCCTTTTCGTACAAAACCTTAATGATGTTCATAGGAAGTTATCCTGTTATCTaGACAGAGGGCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: MTPRQGSFSYKTLMMFIGSYPVI*TEGWDL
Trigger: CAAATCCCAGCCCTCTGTCAAGATAACAGGATAACT...TCCTATGAACATCATTAAGGTTTTGTACGAAAAGGAACCTTGCCGCGGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp GAACCAGTTAGAGCTAATTTGTGGCCGTCACTAAGAGTGCTTCTCTTGGTACTTAGTTATCCTGTTATCTaGACAGAGGGCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: EPVRANLWPSLRVLLLVLSYPVI*TEGWDL
Trigger: CAAATCCCAGCCCTCTGTCAAGATAACAGGATAACT...AAGTACCAAGAGAAGCACTCTTAGTGACGGCCACAAATTAGCTCTAACTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGCCTTGTCAACAGTTCTaGAGCTGCTGGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KIMRLEYFGISRSSHLILPCQQF*SCWRAA
Trigger: AGCTGCTCTCCAGCAGCTCAAGAACTGTTGACAAGG...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp AGGTGTCCATACACAGGAGATAAAGTGCCATTGCGGGTATACTGTTACAAGCCGCACATGGCTTCATTTTaGTCTTCAATGGTTATGTGT +
Preference number: 5 (lower is better)
Translates to: RCPYTGDKVPLRVYCYKPHMASF*SSMVMC
Trigger: ACACATAACCATTGAAGACAAAAATGAAGCCATGTG...CGGCTTGTAACAGTATACCCGCAATGGCACTTTATCTCCTGTGTATGGACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTACACAGGTTCATCTTCCCTTTCTaGTACATCACATTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RDIIYYHEPTDCLQILHRFIFPF*YITFPS
Trigger: GGAAGGAAATGTGATGTACAAGAAAGGGAAGATGAA...CCTGTGTAGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCTGAAACGCTACTGCTaGAAGTCAAACTACTGGTGG +
Preference number: 5 (lower is better)
Translates to: KKKRHHLLPRANRLPPDSLKRYC*KSNYWW
Trigger: CCACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAG...AGAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS-3UTR CAA 90 bp AAAATCATGAGACTAGAGTACTTTGGAATTTCTAGAAGCTCCCACCTTATTCTGACAGAGGGCTGGGATTaGGCACTTGTTCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KIMRLEYFGISRSSHLILTEGWD*ALVLFQ
Trigger: CTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGT...CAGAATAAGGTGGGAGCTTCTAGAAATTCCAAAGTACTCTAGTCTCATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037526.11
CDS-3UTR CAA 90 bp AAAGAAAAAGAGACATCATTTATTACCACGAGCCAACAGACTGCCTCCAGATTCTCAATTCCAGAGCCTTaGAAGCAAATTCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KEKETSFITTSQQTASRFSIPEP*KQILLP
Trigger: TGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTGA...GAATCTGGAGGCAGTCTGTTGGCTCGTGGTAATAAATGATGTCTCTTTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TGCCGCTCTCACTGCGCTGCAGCTGGAGGCTCTGGCTaGCGCCCAGCCGATCCCCGAAGTGGCCACAACCAG +
Preference number: 6 (lower is better)
Translates to: CRSHCAAAGGSG*RPADPRSGHNQ
Trigger: CTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GCAGTGCCGCTCTCACTGCGCTGCAGCTGGAGGCTCTaGCTGGCGCCCAGCCGATCCCCGAAGTGGCCACAA +
Preference number: 6 (lower is better)
Translates to: AVPLSLRCSWRL*LAPSRSPKWPQ
Trigger: TTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CTCGGTAGAGGATACGCAGTGCCGCTCTCACTGCGCTaGAGCTGGAGGCTCTGGCTGGCGCCCAGCCGATCC +
Preference number: 6 (lower is better)
Translates to: LGRGYAVPLSLR*SWRLWLAPSRS
Trigger: GGATCGGCTGGGCGCCAGCCAGAGCCTCCAGCTGCAGCGCAGTGAGAGCGGCACTGCGTATCCTCTACCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp AAGCCGGGTGCCGCACATCGCTACAGCTCACTGGTCCGCCCTGGTTaGGAGGAGCCATGTCCACGGCCACGGAGGCATGAGCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: KPGAAHRYSSLVRPG*EEPCPRPRRHEPGA
Trigger: GGCTCCTGGCTCATGCCTCCGTGGCCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGGCACCCGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TCTGCCATTCCCAGCAAGGACTGGACGACCGAGCTGTaGCCCATGCTGGCGGCGGCTGTCAGTGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SAIPSKDWTTEL*PMLAAAVSACC
Trigger: GCAGCAGGCACTGACAGCCGCCGCCAGCATGGGCCACAGCTCGGTCGTCCAGTCCTTGCTGGGAATGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GAGGGAAGCCGGGTGCCGCACATCGCTACAGCTCACTaGTCCGCCCTGGTTTGGAGGAGCCATGTCCACGGC +
Preference number: 6 (lower is better)
Translates to: EGSRVPHIATAH*SALVWRSHVHG
Trigger: GCCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGGCACCCGGCTTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TGGAGGCTCTGGCTGGCGCCCAGCCGATCCCCGAAGTaGCCACAACCAGTTCCTGCAGTGAAGGGACCGGTT +
Preference number: 6 (lower is better)
Translates to: WRLWLAPSRSPK*PQPVPAVKGPV
Trigger: AACCGGTCCCTTCACTGCAGGAACTGGTTGTGGCCACTTCGGGGATCGGCTGGGCGCCAGCCAGAGCCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CCGCACATCGCTACAGCTCACTGGTCCGCCCTGGTTTaGAGGAGCCATGTCCACGGCCACGGAGGCATGAGC +
Preference number: 6 (lower is better)
Translates to: PHIATAHWSALV*RSHVHGHGGMS
Trigger: GCTCATGCCTCCGTGGCCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp GCCGCACATCGCTACAGCTCACTGGTCCGCCCTGGTTaGGAGGAGCCATGTCCACGGCCACGGAGGCATGAG +
Preference number: 6 (lower is better)
Translates to: AAHRYSSLVRPG*EEPCPRPRRHE
Trigger: CTCATGCCTCCGTGGCCGTGGACATGGCTCCTCCAAACCAGGGCGGACCAGTGAGCTGTAGCGATGTGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp GAACCGAGGCTCCGCAGCACCAGATGGCTGCTGACTTaGCTGATGAGGGCGGCGTCGGCCTTGCCATTCAGG +
Preference number: 6 (lower is better)
Translates to: EPRLRSTRWLLT*LMRAASALPFR
Trigger: CCTGAATGGCAAGGCCGACGCCGCCCTCATCAGCAAAGTCAGCAGCCATCTGGTGCTGCGGAGCCTCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp ACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTTaGTGCTGGAACCTGGCGGTCTTGTCCATGATGCCC +
Preference number: 6 (lower is better)
Translates to: TGQCQERFGGLL*CWNLAVLSMMP
Trigger: GGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp GCTGTGTTTGTCAGTAGCCCCTCTGCCACCGGGCAGTaGCAGGAGCGGTTCGGAGGATTGCTTTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AVFVSSPSATGQ*QERFGGLLCCW
Trigger: CCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGAGGGGCTACTGACAAACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp ATGAGGGCGGCGTCGGCCTTGCCATTCAGGGAGATGTaGCTGAGGATGTCCTGGCTGCTGTGGACCCTGTGC +
Preference number: 6 (lower is better)
Translates to: MRAASALPFREM*LRMSWLLWTLC
Trigger: GCACAGGGTCCACAGCAGCCAGGACATCCTCAGCAACATCTCCCTGAATGGCAAGGCCGACGCCGCCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTaGCTGCTGGAACCTGGCGGTCTTGTCCATGATGCC +
Preference number: 6 (lower is better)
Translates to: HRAVPGAVRRIA*LLEPGGLVHDA
Trigger: GGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp CCCCTCTGCCACCGGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTaGCTGCTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATGG +
Preference number: 6 (lower is better)
Translates to: PLCHRAVPGAVRRIA*LLEPGGLVHDAHKW
Trigger: CCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp AGTAGCCCCTCTGCCACCGGGCAGTGCCAGGAGCGGTTCGGAGGATaGCTTTGCTGCTGGAACCTGGCGGTCTTGTCCATGATGCCCATA +
Preference number: 6 (lower is better)
Translates to: SSPSATGQCQERFGG*LCCWNLAVLSMMPI
Trigger: TATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCCGGTGGCAGAGGGGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp CCACGGAGGCATGAGCCAGGAGCCTCTCGGCAGCTTTaGCTTTGCTCGGTAGAGGATACGCAGTGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: PRRHEPGASRQL*LCSVEDTQCRS
Trigger: AGAGCGGCACTGCGTATCCTCTACCGAGCAAAGTCAAAGCTGCCGAGAGGCTCCTGGCTCATGCCTCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp ACGTCGCAGCCGCGATCCAAAAGCAATCGGACAACCTaGCAATGGCCTTGGCGGGCGGCACAAAACAGAGGG +
Preference number: 6 (lower is better)
Translates to: TSQPRSKSNRTT*QWPWRAAQNRG
Trigger: CCCTCTGTTTTGTGCCGCCCGCCAAGGCCATTGGCAGGTTGTCCGATTGCTTTTGGATCGCGGCTGCGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp GGAGTGTTGCGGGGCCTGTGTTCGGCAGTGCCACCCTaGACCTGGGTTGTACCTTTGTCTCTGATCCGAGAG +
Preference number: 6 (lower is better)
Translates to: GVLRGLCSAVPP*TWVVPLSLIRE
Trigger: CTCTCGGATCAGAGACAAAGGTACAACCCAGGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GGCTGGCGCATCCTCCTCATTATCCGAGTCATTGGCTaGAGCTGGTGGGGGACCCTGCTGCTTTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GWRILLIIRVIG*SWWGTLLLLLL
Trigger: CAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGATGCGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CTGGCGGTCTTGTCCATGATGCCCATAAATGGAGTGTaGCGGGGCCTGTGTTCGGCAGTGCCACCCTGCACC +
Preference number: 6 (lower is better)
Translates to: LAVLSMMPINGV*RGLCSAVPPCT
Trigger: GGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp AGCACCAGATGGCTGCTGACTTTGCTGATGAGGGCGGCGTCGGCCTaGCCATTCAGGGAGATGTTGCTGAGGATGTCCTGGCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: STRWLLTLLMRAASA*PFREMLLRMSWLLW
Trigger: CCACAGCAGCCAGGACATCCTCAGCAACATCTCCCTGAATGGCAAGGCCGACGCCGCCCTCATCAGCAAAGTCAGCAGCCATCTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GAGGGCCTCCATCCTCTGCTGGAAGTCCTCCCAGCCCTGCTCGCCTaGGATGTGGCCGGCGTTGATAGCCTGAAATATCTGCTCATCCGT +
Preference number: 6 (lower is better)
Translates to: EGLHPLLEVLPALLA*DVAGVDSLKYLLIR
Trigger: ACGGATGAGCAGATATTTCAGGCTATCAACGCCGGCCACATCCAAGGCGAGCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TGGTCTCGCAGGGACTTTTGCTGGCTGCCGTCTTGCTaGCACAGCTATTCAAGGTCGAGCAGGGGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: WSRRDFCWLPSC*HSYSRSSRGCR
Trigger: CCGACAGCCCCTGCTCGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TGCTTTCGCCATCCGCTCTCCACACCAGCCACTCTCTaGAGGACGGGTGGCAGAACATGCGGGTTTTGTCCC +
Preference number: 6 (lower is better)
Translates to: CFRHPLSTPATL*RTGGRTCGFCP
Trigger: GGGACAAAACCCGCATGTTCTGCCACCCGTCCTTCAGAGAGTGGCTGGTGTGGAGAGCGGATGGCGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp GCTGGCGGTTCAGCTTGCTCTCCTGTCGAGAGAACATaGACGCCAGTAGAGCGTGTCCGTTCCTGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: AGGSACSPVERT*TPVERVRSWAH
Trigger: GTGAGCCCAGGAACGGACACGCTCTACTGGCGTTCATGTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp CATCTTTATGCTGCTCGATGGAGAGCCAGAGGAGCCTaGGCTAGAGAGGGAAGCCGGGTGCCGCACATCGCT +
Preference number: 6 (lower is better)
Translates to: HLYAARWRARGA*AREGSRVPHIA
Trigger: AGCGATGTGCGGCACCCGGCTTCCCTCTCTAGCTCAGGCTCCTCTGGCTCTCCATCGAGCAGCATAAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CAGCACGCTCTCCGCGGACCCAGTAGTCTCCTCTTCTaGCACTGGGGAACAGTTATCTGCCCTTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: QHALRGPSSLLF*HWGTVICPSVM
Trigger: CATGACCGAAGGGCAGATAACTGTTCCCCAGTGGCAGAAGAGGAGACTACTGGGTCCGCGGAGAGCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CAGCTTCATGTGGCCGGCAGCAGCTGCGTAGCACAGTaGGTTCATACCGTTCTCCGACATCCCATCCAGGCA +
Preference number: 6 (lower is better)
Translates to: QLHVAGSSCVAQ*VHTVLRHPIQA
Trigger: TGCCTGGATGGGATGTCGGAGAACGGTATGAACGCACTGTGCTACGCAGCTGCTGCCGGCCACATGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp GGGCAGTGCCAGGAGCGGTTCGGAGGATTGCTTTGCTaGTGGAACCTGGCGGTCTTGTCCATGATGCCCATA +
Preference number: 6 (lower is better)
Translates to: GQCQERFGGLLC*WNLAVLSMMPI
Trigger: TATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GAAGCGAGGTATTTCACCGCATCCTCTCTCGGTCTCTaGCTGTCAGCAGTCCCAGGCCCAGCAGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: EARYFTASSLGL*LSAVPGPAGVL
Trigger: CAGAACACCTGCTGGGCCTGGGACTGCTGACAGCCAGAGACCGAGAGAGGATGCGGTGAAATACCTCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTaGAGTTGCTTGCACTCTTCTTCAACACGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GGGPCCFCCWFL*SCLHSSSTRAR
Trigger: CCTGGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATaGAGTGTTGCGGGGCCTGTGTTCGGCAGTGCCACC +
Preference number: 6 (lower is better)
Translates to: LEPGGLVHDAHK*SVAGPVFGSAT
Trigger: GGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GCAGCGGCCGTCAGGGCTGTTTCTCCCCACAACGTGTCGGTGCCGTaGACTTCGATTTCATGTTCCTCTGCCATTCCCAGCAAGGACTGG +
Preference number: 6 (lower is better)
Translates to: AAAVRAVSPHNVSVP*TSISCSSAIPSKDW
Trigger: CCAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATCGAAGTCAACGGCACCGACACGTTGTGGGGAGAAACAGCCCTGACGGCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp TGCTGGAACCTGGCGGTCTTGTCCATGATGCCCATAAATGGAGTGTaGCGGGGCCTGTGTTCGGCAGTGCCACCCTGCACCTGGGTTGTA +
Preference number: 6 (lower is better)
Translates to: CWNLAVLSMMPINGV*RGLCSAVPPCTWVV
Trigger: TACAACCCAGGTGCAGGGTGGCACTGCCGAACACAGGCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp AGGTGTCCCTCACAGGAAGCCACCATGAGAGGTGTTCGACCCTGCTaGTCACTCAGGTTCACGTCGCAGCCGCGATCCAAAAGCAATCGG +
Preference number: 6 (lower is better)
Translates to: RCPSQEATMRGVRPC*SLRFTSQPRSKSNR
Trigger: CCGATTGCTTTTGGATCGCGGCTGCGACGTGAACCTGAGTGACAAGCAGGGTCGAACACCTCTCATGGTGGCTTCCTGTGAGGGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp CAGGAGCGGTTCGGAGGATTGCTTTGCTGCTGGAACCTGGCGGTCTaGTCCATGATGCCCATAAATGGAGTGTTGCGGGGCCTGTGTTCG +
Preference number: 6 (lower is better)
Translates to: QERFGGLLCCWNLAV*SMMPINGVLRGLCS
Trigger: CGAACACAGGCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp AACTTGTCGCTGCAACTGAGTTGGGCCGTGGCATTATaGGCGAGCCAGAGCTCTGAGGATAGGGCACCGGAC +
Preference number: 6 (lower is better)
Translates to: NLSLQLSWAVAL*ASQSSEDRAPD
Trigger: GTCCGGTGCCCTATCCTCAGAGCTCTGGCTCGCTCATAATGCCACGGCCCAACTCAGTTGCAGCGACAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp GCTCCTTCTTCGACCAGGTACTGGACCACTGCCCTGTaGCCCTTCAGACAAGCCCAGCTCAATGCTGACAGG +
Preference number: 6 (lower is better)
Translates to: APSSTRYWTTAL*PFRQAQLNADR
Trigger: CCTGTCAGCATTGAGCTGGGCTTGTCTGAAGGGTCACAGGGCAGTGGTCCAGTACCTGGTCGAAGAAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp GCCGATCCCCGAAGTGGCCACAACCAGTTCCTGCAGTaGAGGGACCGGTTCCCTCTAAATGCTGGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: ADPRSGHNQFLQ*RDRFPLNAGFC
Trigger: GCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGGTTGTGGCCACTTCGGGGATCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp TGTGCCTTCAGGATGTGGTGGCCAAGCTCCATGGTCTaGTGGCGGTTCAGCTTGCTCTCCTGTCGAGAGAAC +
Preference number: 6 (lower is better)
Translates to: CAFRMWWPSSMV*WRFSLLSCREN
Trigger: GTTCTCTCGACAGGAGAGCAAGCTGAACCGCCAGCAGACCATGGAGCTTGGCCACCACATCCTGAAGGCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CAGCAGGTACTGGAGAATGTCACTGTGGCCCCTCAGTaGGCTGTGGACGAGTGCACACTGGCCCTTCTTATC +
Preference number: 6 (lower is better)
Translates to: QQVLENVTVAPQ*AVDECTLALLI
Trigger: GATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGTGACATTCTCCAGTACCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp AGCTCGGTTCATTATCAGCCTTCGCTTCAGTCGCACTaGGCTCTGAGGGCTTGGACCCTTCTCCGAACGGGA +
Preference number: 6 (lower is better)
Translates to: SSVHYQPSLQSH*ALRAWTLLRTG
Trigger: TCCCGTTCGGAGAAGGGTCCAAGCCCTCAGAGCCCAGTGCGACTGAAGCGAAGGCTGATAATGAACCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TTAATGAGGAAGCAAGAGAGGGCCTCCATCCTCTGCTaGAAGTCCTCCCAGCCCTGCTCGCCTTGGATGTGG +
Preference number: 6 (lower is better)
Translates to: LMRKQERASILC*KSSQPCSPWMW
Trigger: CCACATCCAAGGCGAGCAGGGCTGGGAGGACTTCCAGCAGAGGATGGAGGCCCTCTCTTGCTTCCTCATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CCGAGTCCTTCCCGAGGGAACTTCCGCAAGGCATACTaGTACCTCTGGGCTGCCTCCTTCATCTTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: PSPSRGNFRKAY*YLWAASFIFPF
Trigger: GAAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAAGTTCCCTCGGGAAGGACTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CGCATCCTCCTCATTATCCGAGTCATTGGCTGGAGCTaGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: RILLIIRVIGWS*WGTLLLLLLVP
Trigger: AGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp AAGGTTGCGGATGTATGGGGAAGGGACAGACGGTGGTaGCTGGGATCTGGGAGTCGGGGAAATGGACTCTTC +
Preference number: 6 (lower is better)
Translates to: KVADVWGRDRRW*LGSGSRGNGLF
Trigger: GAAGAGTCCATTTCCCCGACTCCCAGATCCCAGCCACCACCGTCTGTCCCTTCCCCATACATCCGCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GAGGTGGCTCCTGTGGGCTTCCGTACTGACATGAAGTaGCTGCTTAGAGACGCCCTCTGGGTAGAGATGAGG +
Preference number: 6 (lower is better)
Translates to: EVAPVGFRTDMK*LLRDALWVEMR
Trigger: CCTCATCTCTACCCAGAGGGCGTCTCTAAGCAGCCACTTCATGTCAGTACGGAAGCCCACAGGAGCCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp GGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTGGAGTaGCTTGCACTCTTCTTCAACACGGGCCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: GTLLLLLLVPLE*LALFFNTGQEP
Trigger: AGGCTCCTGGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp GTCATTGGCTGGAGCTGGTGGGGGACCCTGCTGCTTTaGCTGCTGGTTCCTCTGGAGTTGCTTGCACTCTTC +
Preference number: 6 (lower is better)
Translates to: VIGWSWWGTLLL*LLVPLELLALF
Trigger: GAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp CACACCAGCCACTCTCTGAAGGACGGGTGGCAGAACATGCGGGTTTaGTCCCTCCTCTTAATGAGGAAGCAAGAGAGGGCCTCCATCCTC +
Preference number: 6 (lower is better)
Translates to: HTSHSLKDGWQNMRV*SLLLMRKQERASIL
Trigger: GAGGATGGAGGCCCTCTCTTGCTTCCTCATTAAGAGGAGGGACAAAACCCGCATGTTCTGCCACCCGTCCTTCAGAGAGTGGCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp AGCTGGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTCCTCTGGAGTaGCTTGCACTCTTCTTCAACACGGGCCAGGAGCCTCTTGATTTC +
Preference number: 6 (lower is better)
Translates to: SWWGTLLLLLLVPLE*LALFFNTGQEPLDF
Trigger: GAAATCAAGAGGCTCCTGGCCCGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp AGGAGAGTCACCACTGGAGGACAAGGCAGGCGTCTCTaGGCCAAAGTCACCTCCTGCTTCCTTCTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RRVTTGGQGRRL*AKVTSCFLLAS
Trigger: GGAAGCAAGAAGGAAGCAGGAGGTGACTTTGGCTCAGAGACGCCTGCCTTGTCCTCCAGTGGTGACTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp AGCCCCATTGTGGACACCCATGCTCAGGGGAGGAACTaGACACGGTTTGGCTTGGCTACAGTATCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SPIVDTHAQGRN*TRFGLATVSSW
Trigger: CCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp GGGGCTGCTAATGGTCTCGCAGGGACTTTTGCTGGCTaGCGTCTTGCTGACACAGCTATTCAAGGTCGAGCA +
Preference number: 6 (lower is better)
Translates to: GAANGLAGTFAG*RLADTAIQGRA
Trigger: TGCTCGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGACCATTAGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CGTGTCGGTGCCGTTGACTTCGATTTCATGTTCCTCTaGCATTCCCAGCAAGGACTGGACGACCGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RVGAVDFDFMFL*HSQQGLDDRAV
Trigger: CACAGCTCGGTCGTCCAGTCCTTGCTGGGAATGGCAGAGGAACATGAAATCGAAGTCAACGGCACCGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp TTATCCGAGTCATTGGCTGGAGCTGGTGGGGGACCCTaGTGCTTTTGCTGCTGGTTCCTCTGGAGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: LSESLAGAGGGP*CFCCWFLWSCL
Trigger: CAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CCAGTTCCTGCAGTGAAGGGACCGGTTCCCTCTAAATaGTGGTTTCTGCTCACGGCAGGGGCTGCAGATACT +
Preference number: 6 (lower is better)
Translates to: PVPAVKGPVPSK*WFLLTAGAADT
Trigger: AGTATCTGCAGCCCCTGCCGTGAGCAGAAACCAGCATTTAGAGGGAACCGGTCCCTTCACTGCAGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TACTGGAGAATGTCACTGTGGCCCCTCAGTGCGCTGTaGACGAGTGCACACTGGCCCTTCTTATCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: YWRMSLWPLSAL*TSAHWPFLSKW
Trigger: CCACTTGGATAAGAAGGGCCAGTGTGCACTCGTCCACAGCGCACTGAGGGGCCACAGTGACATTCTCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CTAATGGTCTCGCAGGGACTTTTGCTGGCTGCCGTCTaGCTGACACAGCTATTCAAGGTCGAGCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LMVSQGLLLAAV*LTQLFKVEQGL
Trigger: CAGCCCCTGCTCGACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCAGCAAAAGTCCCTGCGAGACCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp TCCTTTAAACTAGAGGCTGGCGCATCCTCCTCATTATCCGAGTCATaGGCTGGAGCTGGTGGGGGACCCTGCTGCTTTTGCTGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: SFKLEAGASSSLSES*AGAGGGPCCFCCWF
Trigger: GAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAATGAGGAGGATGCGCCAGCCTCTAGTTTAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GCCCCATTGTGGACACCCATGCTCAGGGGAGGAACTGAACACGGTTaGGCTTGGCTACAGTATCCTCCTGGCTTGAGAGTGGGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: APLWTPMLRGGTEHG*AWLQYPPGLRVGFS
Trigger: TGAGAAACCCACTCTCAAGCCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGCATGGGTGTCCACAATGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TCCCATCCAGGCAGGCGCCAAATTCCAGAAGGAGAGTaGCAACTTCTTCATGGCCAAGGTGAGACTGGACGC +
Preference number: 6 (lower is better)
Translates to: SHPGRRQIPEGE*QLLHGQGETGR
Trigger: GCGTCCAGTCTCACCTTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGAATTTGGCGCCTGCCTGGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp GGGGATGCTGACCTGCCTTTGGACTGTAATCCCTCTTaGAGGTTGCGGATGTATGGGGAAGGGACAGACGGT +
Preference number: 6 (lower is better)
Translates to: GDADLPLDCNPS*RLRMYGEGTDG
Trigger: ACCGTCTGTCCCTTCCCCATACATCCGCAACCTTCAAGAGGGATTACAGTCCAAAGGCAGGTCAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp GGGAGTACGGCCGTTTTTGTCTGTCTGGTCTATCTCTaGTCCTTCTTCGACCAGGTACTGGACCACTGCCCT +
Preference number: 6 (lower is better)
Translates to: GSTAVFVCLVYL*SFFDQVLDHCP
Trigger: AGGGCAGTGGTCCAGTACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACAGACAAAAACGGCCGTACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CTGACCTGCCTTTGGACTGTAATCCCTCTTGAAGGTTaGGGATGTATGGGGAAGGGACAGACGGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LTCLWTVIPLEG*GCMGKGQTVVA
Trigger: AGCCACCACCGTCTGTCCCTTCCCCATACATCCGCAACCTTCAAGAGGGATTACAGTCCAAAGGCAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp CCTCCTGGCTTGAGAGTGGGTTTCTCAGAGTTAGACTaGAGGCCAGCTGCAGTGGCTGTGTTTGTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: PPGLRVGFSELD*RPAAVAVFVSS
Trigger: GCTACTGACAAACACAGCCACTGCAGCTGGCCTGCAGTCTAACTCTGAGAAACCCACTCTCAAGCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TGGGATCTGAGGATTTGGGTGACAAACTGGGACTGCTaGATGCGATCTGTCTCATGCGGCTTCCGTGACAGC +
Preference number: 6 (lower is better)
Translates to: WDLRIWVTNWDC*MRSVSCGFRDS
Trigger: GCTGTCACGGAAGCCGCATGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GGTCCTGAGTGGGATCTGAGGATTTGGGTGACAAACTaGGACTGCTGGATGCGATCTGTCTCATGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: GPEWDLRIWVTN*DCWMRSVSCGF
Trigger: GAAGCCGCATGAGACAGATCGCATCCAGCAGTCCCAGTTTGTCACCCAAATCCTCAGATCCCACTCAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp GCCAGGTCCAAGGGAGTACGGCCGTTTTTGTCTGTCTaGTCTATCTCTGCTCCTTCTTCGACCAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: ARSKGVRPFLSV*SISAPSSTRYW
Trigger: CCAGTACCTGGTCGAAGAAGGAGCAGAGATAGACCAGACAGACAAAAACGGCCGTACTCCCTTGGACCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CAGTGCCAGGAGCGGTTCGGAGGATTGCTTTGCTGCTaGAACCTGGCGGTCTTGTCCATGATGCCCATAAAT +
Preference number: 6 (lower is better)
Translates to: QCQERFGGLLCC*NLAVLSMMPIN
Trigger: ATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAACCGCTCCTGGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp TTCGGAGGATTGCTTTGCTGCTGGAACCTGGCGGTCTaGTCCATGATGCCCATAAATGGAGTGTTGCGGGGC +
Preference number: 6 (lower is better)
Translates to: FGGLLCCWNLAV*SMMPINGVLRG
Trigger: GCCCCGCAACACTCCATTTATGGGCATCATGGACAAGACCGCCAGGTTCCAGCAGCAAAGCAATCCTCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp TGGACACCCATGCTCAGGGGAGGAACTGAACACGGTTaGGCTTGGCTACAGTATCCTCCTGGCTTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: WTPMLRGGTEHG*AWLQYPPGLRV
Trigger: CACTCTCAAGCCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTCAGTTCCTCCCCTGAGCATGGGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp ATTATCCGAGTCATTGGCTGGAGCTGGTGGGGGACCCTGCTGCTTTaGCTGCTGGTTCCTCTGGAGTTGCTTGCACTCTTCTTCAACACG +
Preference number: 6 (lower is better)
Translates to: IIRVIGWSWWGTLLL*LLVPLELLALFFNT
Trigger: CGTGTTGAAGAAGAGTGCAAGCAACTCCAGAGGAACCAGCAGCAAAAGCAGCAGGGTCCCCCACCAGCTCCAGCCAATGACTCGGATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GGAGGAACTGAACACGGTTTGGCTTGGCTACAGTATCCTCCTGGCTaGAGAGTGGGTTTCTCAGAGTTAGACTGCAGGCCAGCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: GGTEHGLAWLQYPPG*RVGFSELDCRPAAV
Trigger: CACTGCAGCTGGCCTGCAGTCTAACTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTCAGTTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TCAGGGCTGTTTCTCCCCACAACGTGTCGGTGCCGTTaGCTTCGATTTCATGTTCCTCTGCCATTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGLFLPTTCRCR*LRFHVPLPFPA
Trigger: TGCTGGGAATGGCAGAGGAACATGAAATCGAAGTCAACGGCACCGACACGTTGTGGGGAGAAACAGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TCCCGAGGGAACTTCCGCAAGGCATACTGGTACCTCTaGGCTGCCTCCTTCATCTTCCCTTTCTTGTACATC +
Preference number: 6 (lower is better)
Translates to: SRGNFRKAYWYL*AASFIFPFLYI
Trigger: GATGTACAAGAAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAAGTTCCCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp TGCCCGGAACCCAGATGTTGGTTGGTCTTCACTATCTGTGCCTGTTaGGTAGGCTGCATAACCAAGCCTGACTGGGCTACAGTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: CPEPRCWLVFTICAC*VGCITKPDWATVSL
Trigger: GAGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACAGATAGTGAAGACCAACCAACATCTGGGTTCCGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TGTGCTGTAACCGATCCACAGAGCCTGCAGATGGCTTaGGGAGACTCCAGTCTTCTTACTGAGGCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: CAVTDPQSLQMA*GDSSLLTEALE
Trigger: TTCAAGGGCCTCAGTAAGAAGACTGGAGTCTCCTCAAGCCATCTGCAGGCTCTGTGGATCGGTTACAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp CCGTGCTCCAGCCGTATTGTGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATTTCTCTGTCCGTCCAA +
Preference number: 6 (lower is better)
Translates to: PCSSRIVPGQSN*CPKRSISLSVQ
Trigger: TTGGACGGACAGAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112568.8
CDS GCA 72 bp GCTTTAACTTCCGGTGCCCTACCTCCAGCCGTATTGTaGCAGGGCAATCTAATTGATGTCCGAAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: ALTSGALPPAVL*QGNLIDVRRGA
Trigger: TGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS GCA 72 bp CAACAGGATCTCCTGAGGTTTGTAGGGAGCAAACCGTaGTTTAACTTCCGGTGCCCTACCTCCAGCCGTATT +
Preference number: 6 (lower is better)
Translates to: QQDLLRFVGSKP*FNFRCPTSSRI
Trigger: AATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCACGGTTTGCTCCCTACAAACCTCAGGAGATCCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS CCA 72 bp TGTGCCTGTTTGGTAGGCTGCATAACCAAGCCTGACTaGGCTACAGTCTCTCTCAGGGACTTGCTGATTCCT +
Preference number: 6 (lower is better)
Translates to: CACLVGCITKPD*ATVSLRDLLIP
Trigger: AGGAATCAGCAAGTCCCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CCCCTTTGGCCAAGCTCACACGATAAGTGTCCTCTGTaGTGGACAAACTGTTCACAGGAGAGTCACCACTGG +
Preference number: 6 (lower is better)
Translates to: PLWPSSHDKCPL*WTNCSQESHHW
Trigger: CCAGTGGTGACTCTCCTGTGAACAGTTTGTCCACAACAGAGGACACTTATCGTGTGAGCTTGGCCAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CGTGCTTTAACTTCCGGTGCCCTACCTCCAGCCGTATaGTGCCAGGGCAATCTAATTGATGTCCGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: RALTSGALPPAV*CQGNLIDVRRG
Trigger: TCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS CAA 72 bp GAACACGGTTTGGCTTGGCTACAGTATCCTCCTGGCTaGAGAGTGGGTTTCTCAGAGTTAGACTGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: EHGLAWLQYPPG*RVGFSELDCRP
Trigger: TGGCCTGCAGTCTAACTCTGAGAAACCCACTCTCAAGCCAGGAGGATACTGTAGCCAAGCCAAACCGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GGAGCAAACCGTGCTTTAACTTCCGGTGCCCTACCTCCAGCCGTATaGTGCCAGGGCAATCTAATTGATGTCCGAAGAGGAGCATTTCTC +
Preference number: 6 (lower is better)
Translates to: GANRALTSGALPPAV*CQGNLIDVRRGAFL
Trigger: GAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGGGCACCGGAAGTTAAAGCACGGTTTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS CAA 90 bp AGGAACCCCCTTAGTTATCCTGTTATCTTGACAGAGGGCTGGGATTaGGCACTTGTTCTCTTCCAGCTCCTTCACCTGAGCCCCATTGTG +
Preference number: 6 (lower is better)
Translates to: RNPLSYPVILTEGWD*ALVLFQLLHLSPIV
Trigger: CACAATGGGGCTCAGGTGAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGATAACAGGATAACTAAGGGGGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp GCCCTCTGGGTAGAGATGAGGAACCCCCTTAGTTATCCTGTTATCTaGACAGAGGGCTGGGATTTGGCACTTGTTCTCTTCCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: ALWVEMRNPLSYPVI*TEGWDLALVLFQLL
Trigger: AAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGATAACAGGATAACTAAGGGGGTTCCTCATCTCTACCCAGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp CCTACCTCCAGCCGTATTGTGCCAGGGCAATCTAATTaGTGTCCGAAGAGGAGCATTTCTCTGTCCGTCCAA +
Preference number: 6 (lower is better)
Translates to: PTSSRIVPGQSN*CPKRSISLSVQ
Trigger: TTGGACGGACAGAGAAATGCTCCTCTTCGGACATCAATTAGATTGCCCTGGCACAATACGGCTGGAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037526.11
ENSMUST00000139863.3
CDS TCA 72 bp TCCAGAAGGAGAGTGACAACTTCTTCATGGCCAAGGTaGGACTGGACGCACAGGATGGGGGCATTGTTTAAC +
Preference number: 6 (lower is better)
Translates to: SRRRVTTSSWPR*DWTHRMGALFN
Trigger: GTTAAACAATGCCCCCATCCTGTGCGTCCAGTCTCACCTTGGCCATGAAGAAGTTGTCACTCTCCTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TATCTGTGCCTGTTTGGTAGGCTGCATAACCAAGCCTaGCTGGGCTACAGTCTCTCTCAGGGACTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: YLCLFGRLHNQA*LGYSLSQGLAD
Trigger: ATCAGCAAGTCCCTGAGAGAGACTGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp CACATTGGACTCTATGAACGATCGCTTTGGTTTTGCTaGAGTGAGGTGGCTCCTGTGGGCTTCCGTACTGAC +
Preference number: 6 (lower is better)
Translates to: HIGLYERSLWFC*SEVAPVGFRTD
Trigger: GTCAGTACGGAAGCCCACAGGAGCCACCTCACTTCAGCAAAACCAAAGCGATCGTTCATAGAGTCCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CGTACTGACATGAAGTGGCTGCTTAGAGACGCCCTCTaGGTAGAGATGAGGAACCCCCTTAGTTATCCTGTT +
Preference number: 6 (lower is better)
Translates to: RTDMKWLLRDAL*VEMRNPLSYPV
Trigger: AACAGGATAACTAAGGGGGTTCCTCATCTCTACCCAGAGGGCGTCTCTAAGCAGCCACTTCATGTCAGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp TTGGAAGTGGCCATCGCCCAAGCGGCATTTCCTAGTTaGGCTCCTTTTCTAAGCAGGGTAACCACTACAGCA +
Preference number: 6 (lower is better)
Translates to: LEVAIAQAAFPS*APFLSRVTTTA
Trigger: TGCTGTAGTGGTTACCCTGCTTAGAAAAGGAGCCAAACTAGGAAATGCCGCTTGGGCGATGGCCACTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CCCAGATGTTGGTTGGTCTTCACTATCTGTGCCTGTTaGGTAGGCTGCATAACCAAGCCTGACTGGGCTACA +
Preference number: 6 (lower is better)
Translates to: PRCWLVFTICAC*VGCITKPDWAT
Trigger: TGTAGCCCAGTCAGGCTTGGTTATGCAGCCTACCAAACAGGCACAGATAGTGAAGACCAACCAACATCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp ATCCGTCTGAAACGCTACTGCTTGAAGTCAAACTACTGGTGGAACTaGACATCTTTATGCTGCTCGATGGAGAGCCAGAGGAGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: IRLKRYCLKSNYWWN*TSLCCSMESQRSLS
Trigger: GCTCAGGCTCCTCTGGCTCTCCATCGAGCAGCATAAAGATGTCAAGTTCCACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp AGGGAACTTCCGCAAGGCATACTGGTACCTCTGGGCTaGCTCCTTCATCTTCCCTTTCTTGTACATCACATT +
Preference number: 6 (lower is better)
Translates to: RELPQGILVPLG*LLHLPFLVHHI
Trigger: AATGTGATGTACAAGAAAGGGAAGATGAAGGAGGCAGCCCAGAGGTACCAGTATGCCTTGCGGAAGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CTAACCTTAGGCTTCCGTCTCTGTTCCATTCCAGACTaGAGCCACTCCGGTCATCATTTTCCGATGAACTTG +
Preference number: 6 (lower is better)
Translates to: LTLGFRLCSIPD*SHSGHHFPMNL
Trigger: CAAGTTCATCGGAAAATGATGACCGGAGTGGCTCCAGTCTGGAATGGAACAGAGACGGAAGCCTAAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp CTGTTTCTCATGCTAGATTGCCCGGAACCCAGATGTTaGTTGGTCTTCACTATCTGTGCCTGTTTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: LFLMLDCPEPRC*LVFTICACLVG
Trigger: GCCTACCAAACAGGCACAGATAGTGAAGACCAACCAACATCTGGGTTCCGGGCAATCTAGCATGAGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp TGGGTTGTACCTTTGTCTCTGATCCGAGAGTCTGGTCCTTGGACCTaGAATCCGTCTGAAACGCTACTGCTTGAAGTCAAACTACTGGTG +
Preference number: 6 (lower is better)
Translates to: WVVPLSLIRESGPWT*NPSETLLLEVKLLV
Trigger: CACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGAGACAAAGGTACAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp GATACTCTACCCGGCATCGGACTCGGGGGAGGGTTCTaGGAAGAAACTTGTATTTTTGTGCTACTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: DTLPGIGLGGGF*EETCIFVLLFL
Trigger: GAGAAACAGTAGCACAAAAATACAAGTTTCTTCTCAGAACCCTCCCCCGAGTCCGATGCCGGGTAGAGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp AACCCCCTTAGTTATCCTGTTATCTTGACAGAGGGCTaGGATTTGGCACTTGTTCTCTTCCAGCTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: NPLSYPVILTEG*DLALVLFQLLH
Trigger: GTGAAGGAGCTGGAAGAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGATAACAGGATAACTAAGGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp ACTGTTTCTCATGCTAGATTGCCCGGAACCCAGATGTaGGTTGGTCTTCACTATCTGTGCCTGTTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: TVSHARLPGTQM*VGLHYLCLFGR
Trigger: CCTACCAAACAGGCACAGATAGTGAAGACCAACCAACATCTGGGTTCCGGGCAATCTAGCATGAGAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp CCTTTGTCTCTGATCCGAGAGTCTGGTCCTTGGACCTaGAATCCGTCTGAAACGCTACTGCTTGAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: PLSLIRESGPWT*NPSETLLLEVK
Trigger: TTTGACTTCAAGCAGTAGCGTTTCAGACGGATTCAAGGTCCAAGGACCAGACTCTCGGATCAGAGACAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp ACATACTTGGGCTTCCTGACGGGACCTGGAGATTTTTaGTTCGATCTTGACTGTGTCAGGAGAGATTGTCGA +
Preference number: 6 (lower is better)
Translates to: TYLGFLTGPGDF*FDLDCVRRDCR
Trigger: TCGACAATCTCTCCTGACACAGTCAAGATCGAACAAAAAATCTCCAGGTCCCGTCAGGAAGCCCAAGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp GTAGAGATGAGGAACCCCCTTAGTTATCCTGTTATCTaGACAGAGGGCTGGGATTTGGCACTTGTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: VEMRNPLSYPVI*TEGWDLALVLF
Trigger: GAAGAGAACAAGTGCCAAATCCCAGCCCTCTGTCAAGATAACAGGATAACTAAGGGGGTTCCTCATCTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS TCA 72 bp TTCCAGACTGGAGCCACTCCGGTCATCATTTTCCGATaGACTTGTGATTGTGGCTATAATTCCACTGTCCTT +
Preference number: 6 (lower is better)
Translates to: FQTGATPVIIFR*TCDCGYNSTVL
Trigger: AAGGACAGTGGAATTATAGCCACAATCACAAGTTCATCGGAAAATGATGACCGGAGTGGCTCCAGTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp TTGCTCTCGCCCGGGCATAAAAGGCTTCGTAGGATTTaGGTTTCAATTCCAGAGCCTTTGAAGCAAATTCTT +
Preference number: 6 (lower is better)
Translates to: LLSPGHKRLRRI*VSIPEPLKQIL
Trigger: AAGAATTTGCTTCAAAGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCTTTTATGCCCGGGCGAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CCA 72 bp ATCCGTCTGAAACGCTACTGCTTGAAGTCAAACTACTaGTGGAACTTGACATCTTTATGCTGCTCGATGGAG +
Preference number: 6 (lower is better)
Translates to: IRLKRYCLKSNY*WNLTSLCCSME
Trigger: CTCCATCGAGCAGCATAAAGATGTCAAGTTCCACCAGTAGTTTGACTTCAAGCAGTAGCGTTTCAGACGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 90 bp CTGAGAAGAAACTTGTATTTTTGTGCTACTGTTTCTCATGCTAGATaGCCCGGAACCCAGATGTTGGTTGGTCTTCACTATCTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: LRRNLYFCATVSHAR*PGTQMLVGLHYLCL
Trigger: CAGGCACAGATAGTGAAGACCAACCAACATCTGGGTTCCGGGCAATCTAGCATGAGAAACAGTAGCACAAAAATACAAGTTTCTTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS GCA 72 bp ACTTGTATTTTTGTGCTACTGTTTCTCATGCTAGATTaGCCGGAACCCAGATGTTGGTTGGTCTTCACTATC +
Preference number: 6 (lower is better)
Translates to: TCIFVLLFLMLD*PEPRCWLVFTI
Trigger: GATAGTGAAGACCAACCAACATCTGGGTTCCGGGCAATCTAGCATGAGAAACAGTAGCACAAAAATACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp AGGCTTCGTAGGATTTGGGTTTCAATTCCAGAGCCTTaGAAGCAAATTCTTCTGCCAAACCAAAGTCGTTTG +
Preference number: 6 (lower is better)
Translates to: RLRRIWVSIPEP*KQILLPNQSRL
Trigger: CAAACGACTTTGGTTTGGCAGAAGAATTTGCTTCAAAGGCTCTGGAATTGAAACCCAAATCCTACGAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3
CDS CAA 72 bp AACTTGTATTTTTGTGCTACTGTTTCTCATGCTAGATaGCCCGGAACCCAGATGTTGGTTGGTCTTCACTAT +
Preference number: 6 (lower is better)
Translates to: NLYFCATVSHAR*PGTQMLVGLHY
Trigger: ATAGTGAAGACCAACCAACATCTGGGTTCCGGGCAATCTAGCATGAGAAACAGTAGCACAAAAATACAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037526.11
ENSMUST00000112568.8
ENSMUST00000139863.3