Pregenerated sensors for TALDO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025503Ensembl transcript IDs: ENSMUST00000026576.5, ENSMUST00000211654.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTGCAATTAGGACCCAGCTCAAAGGCAGTGCAGGTCTaGGGTCAGCCTCGGTGCAGGACTGGGGCCTCGGGT | + |
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Preference number: 3 (lower is better) Translates to: VQLGPSSKAVQV*GQPRCRTGASG Trigger: ACCCGAGGCCCCAGTCCTGCACCGAGGCTGACCCCAGACCTGCACTGCCTTTGAGCTGGGTCCTAATTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS TCA 90 bp | TGTTTGCCACATGCCAATCAAGGATGCGCCCCACAAAGGGAGAGATaGGCGTCACGCCCGCCTCAGCACAGGCCACAGCCTGGGCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: CLPHANQGCAPQRER*ASRPPQHRPQPGRR Trigger: CCTTCGCCCAGGCTGTGGCCTGTGCTGAGGCGGGCGTGACGCTCATCTCTCCCTTTGTGGGGCGCATCCTTGATTGGCATGTGGCAAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS GCA 90 bp | CCCCAGGAGCTTCGGGGAGATGGTGAGGAAGTCACAGCCCGCCAGTaGTTTGATCTCGCCCGTGTTGCGGAAGGAGGCGCCCATGACAAT | + |
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Preference number: 5 (lower is better) Translates to: PQELRGDGEEVTARQ*FDLARVAEGGAHDN Trigger: ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAAAGCACTGGCGGGCTGTGACTTCCTCACCATCTCCCCGAAGCTCCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 90 bp | TTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTGCTTGAGCTaGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACCGGGGACCCC | + |
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Preference number: 5 (lower is better) Translates to: LKSPVSATTVVNCLS*SKADSILWRFTGDP Trigger: GGGGTCCCCGGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS GCA 90 bp | GGCAATGGCCTCCTCTACCAGCTCTTGGTAGGCAGGCATCTGGGCTaGAGCCAGGATCAGGGATGGGTTGGTGGTGGCATCTTGGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GNGLLYQLLVGRHLG*SQDQGWVGGGILGL Trigger: AAGCCCCAAGATGCCACCACCAACCCATCCCTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTGGTAGAGGAGGCCATTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 90 bp | AAGGGAGAGATGAGCGTCACGCCCGCCTCAGCACAGGCCACAGCCTaGGCGAAGGAGAAAAGCAGTGTCATGTTGCAGTGGATGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: KGEMSVTPASAQATA*AKEKSSVMLQWMPC Trigger: GCATGGCATCCACTGCAACATGACACTGCTTTTCTCCTTCGCCCAGGCTGTGGCCTGTGCTGAGGCGGGCGTGACGCTCATCTCTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS GCA 90 bp | TCGATGGCATTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTaGTTGAGCTGGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: SMALKSPVSATTVVN*LSWSKADSILWRFT Trigger: GGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAATGCCATCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026576.5 |
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| CDS GCA 90 bp | AAGCAGCCATTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTaGTTGAGCTGGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: KQPLKSPVSATTVVN*LSWSKADSILWRFT Trigger: GGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAATGGCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS GCA 90 bp | CCACAGCCTGGGCGAAGGAGAAAAGCAGTGTCATGTTGCAGTGGATaGCATGCTGTTCCTCCAGCTCCTTTCCAGCCTGAATCCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PQPGRRRKAVSCCSG*HAVPPAPFQPESPP Trigger: GGGAGGGGATTCAGGCTGGAAAGGAGCTGGAGGAACAGCATGGCATCCACTGCAACATGACACTGCTTTTCTCCTTCGCCCAGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS GCA 90 bp | CAGCACAGGCCACAGCCTGGGCGAAGGAGAAAAGCAGTGTCATGTTaGAGTGGATGCCATGCTGTTCCTCCAGCTCCTTTCCAGCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: QHRPQPGRRRKAVSC*SGCHAVPPAPFQPE Trigger: TTCAGGCTGGAAAGGAGCTGGAGGAACAGCATGGCATCCACTGCAACATGACACTGCTTTTCTCCTTCGCCCAGGCTGTGGCCTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 90 bp | CAGCTCTTGGTAGGCAGGCATCTGGGCTGCAGCCAGGATCAGGGATaGGTTGGTGGTGGCATCTTGGGGCTTGTATTCATCGATGGCATT | + |
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Preference number: 5 (lower is better) Translates to: QLLVGRHLGCSQDQG*VGGGILGLVFIDGI Trigger: AATGCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACCCATCCCTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026576.5 |
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| CDS CCA 90 bp | CAGCTCTTGGTAGGCAGGCATCTGGGCTGCAGCCAGGATCAGGGATaGGTTGGTGGTGGCATCTTGGGGCTTGTATTCATCGATGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: QLLVGRHLGCSQDQG*VGGGILGLVFIDGF Trigger: AAAGCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACCCATCCCTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS TCA 90 bp | AGAGATGGAAAACAGTGCCCTGCAGCAATCCCAAGTGGATCACAGTaGCAATGCTCACAGCAGCTCCAGAGGCTAGCCACAAAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RDGKQCPAAIPSGSQ*QCSQQLQRLATKQP Trigger: TGGCTGCTTTGTGGCTAGCCTCTGGAGCTGCTGTGAGCATTGTCACTGTGATCCACTTGGGATTGCTGCAGGGCACTGTTTTCCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS CCA 90 bp | TCTCAGGTGTTTGTCAGAGTGACCAGAAGCAGCTGTCACCAGAGATaGAAAACAGTGCCCTGCAGCAATCCCAAGTGGATCACAGTGACA | + |
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Preference number: 5 (lower is better) Translates to: SQVFVRVTRSSCHQR*KTVPCSNPKWITVT Trigger: TGTCACTGTGATCCACTTGGGATTGCTGCAGGGCACTGTTTTCCATCTCTGGTGACAGCTGCTTCTGGTCACTCTGACAAACACCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS TCA 90 bp | GGCTTGTATTCATCGATGGCTTTTTCTCTCAGGTGTTTGTCAGAGTaGCCAGAAGCAGCTGTCACCAGAGATGGAAAACAGTGCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GLYSSMAFSLRCLSE*PEAAVTRDGKQCPA Trigger: TGCAGGGCACTGTTTTCCATCTCTGGTGACAGCTGCTTCTGGTCACTCTGACAAACACCTGAGAGAAAAAGCCATCGATGAATACAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS GCA 72 bp | CTTCGGGGAGATGGTGAGGAAGTCACAGCCCGCCAGTaGTTTGATCTCGCCCGTGTTGCGGAAGGAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LRGDGEEVTARQ*FDLARVAEGGA Trigger: GGCGCCTCCTTCCGCAACACGGGCGAGATCAAAGCACTGGCGGGCTGTGACTTCCTCACCATCTCCCCGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 72 bp | CCCGTGTCGGCCACCACGGTGGTGAACTGCTTGAGCTaGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: PVSATTVVNCLS*SKADSILWRFT Trigger: GGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | GGGGAGATGGTGAGGAAGTCACAGCCCGCCAGTGCTTaGATCTCGCCCGTGTTGCGGAAGGAGGCGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: GEMVRKSQPASA*ISPVLRKEAPM Trigger: CATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAAAGCACTGGCGGGCTGTGACTTCCTCACCATCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | GTCTGGGCCGCCTTGACAGAGAGCGCAGGCGCCAGCTaGCTGTTATCCTTGAGCAGCTCCCCCAGGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VWAALTESAGAS*LLSLSSSPRSF Trigger: GAAGCTCCTGGGGGAGCTGCTCAAGGATAACAGCAAGCTGGCGCCTGCGCTCTCTGTCAAGGCGGCCCAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 90 bp | GAGTCACTGGTCTGGGCCGCCTTGACAGAGAGCGCAGGCGCCAGCTaGCTGTTATCCTTGAGCAGCTCCCCCAGGAGCTTCGGGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: ESLVWAALTESAGAS*LLSLSSSPRSFGEM Trigger: CATCTCCCCGAAGCTCCTGGGGGAGCTGCTCAAGGATAACAGCAAGCTGGCGCCTGCGCTCTCTGTCAAGGCGGCCCAGACCAGTGACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 90 bp | TGGGCCGCCTTGACAGAGAGCGCAGGCGCCAGCTTGCTGTTATCCTaGAGCAGCTCCCCCAGGAGCTTCGGGGAGATGGTGAGGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: WAALTESAGASLLLS*SSSPRSFGEMVRKS Trigger: TGACTTCCTCACCATCTCCCCGAAGCTCCTGGGGGAGCTGCTCAAGGATAACAGCAAGCTGGCGCCTGCGCTCTCTGTCAAGGCGGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS TCA 72 bp | CATGCCAATCAAGGATGCGCCCCACAAAGGGAGAGATaGGCGTCACGCCCGCCTCAGCACAGGCCACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HANQGCAPQRER*ASRPPQHRPQP Trigger: AGGCTGTGGCCTGTGCTGAGGCGGGCGTGACGCTCATCTCTCCCTTTGTGGGGCGCATCCTTGATTGGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | AAATCACCCGTGTCGGCCACCACGGTGGTGAACTGCTaGAGCTGGTCCAAGGCGGACTCCATCCTCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: KSPVSATTVVNC*SWSKADSILWR Trigger: GCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 90 bp | AGGAGCTTCGGGGAGATGGTGAGGAAGTCACAGCCCGCCAGTGCTTaGATCTCGCCCGTGTTGCGGAAGGAGGCGCCCATGACAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: RSFGEMVRKSQPASA*ISPVLRKEAPMTMV Trigger: GACCATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAAAGCACTGGCGGGCTGTGACTTCCTCACCATCTCCCCGAAGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 90 bp | CAGCCATTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTGCTaGAGCTGGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACCGGG | + |
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Preference number: 6 (lower is better) Translates to: QPLKSPVSATTVVNC*SWSKADSILWRFTG Trigger: CCCGGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAATGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS GCA 72 bp | CTCCTCTACCAGCTCTTGGTAGGCAGGCATCTGGGCTaGAGCCAGGATCAGGGATGGGTTGGTGGTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LLYQLLVGRHLG*SQDQGWVGGGI Trigger: GATGCCACCACCAACCCATCCCTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTGGTAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 72 bp | ATGAGCGTCACGCCCGCCTCAGCACAGGCCACAGCCTaGGCGAAGGAGAAAAGCAGTGTCATGTTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: MSVTPASAQATA*AKEKSSVMLQW Trigger: CCACTGCAACATGACACTGCTTTTCTCCTTCGCCCAGGCTGTGGCCTGTGCTGAGGCGGGCGTGACGCTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | TTGACAGAGAGCGCAGGCGCCAGCTTGCTGTTATCCTaGAGCAGCTCCCCCAGGAGCTTCGGGGAGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LTESAGASLLLS*SSSPRSFGEMV Trigger: CACCATCTCCCCGAAGCTCCTGGGGGAGCTGCTCAAGGATAACAGCAAGCTGGCGCCTGCGCTCTCTGTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 90 bp | ATGGCATTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTGCTaGAGCTGGTCCAAGGCGGACTCCATCCTCTGGCGCTTTACCGGG | + |
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Preference number: 6 (lower is better) Translates to: MALKSPVSATTVVNC*SWSKADSILWRFTG Trigger: CCCGGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAATGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026576.5 |
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| CDS GCA 72 bp | TTGAAATCACCCGTGTCGGCCACCACGGTGGTGAACTaGTTGAGCTGGTCCAAGGCGGACTCCATCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LKSPVSATTVVN*LSWSKADSILW Trigger: CCAGAGGATGGAGTCCGCCTTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CCA 72 bp | CCTCTTGAGGCCCACCCAGCTTCTTGCCGTAGGCAATaGCCTCCTCTACCAGCTCTTGGTAGGCAGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PLEAHPASCRRQ*PPLPALGRQAS Trigger: AGATGCCTGCCTACCAAGAGCTGGTAGAGGAGGCCATTGCCTACGGCAAGAAGCTGGGTGGGCCTCAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | CTTCTTGCCGTAGGCAATGGCCTCCTCTACCAGCTCTaGGTAGGCAGGCATCTGGGCTGCAGCCAGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: LLAVGNGLLYQL*VGRHLGCSQDQ Trigger: CTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTGGTAGAGGAGGCCATTGCCTACGGCAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS TCA 72 bp | TGTCCTTGCCGACCCCAGCTTCTTTGTAAAGCTCGATaGGGCGCCTGGCTCGGGCCACCATGGCATCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: CPCRPQLLCKAR*GAWLGPPWHPY Trigger: ATAAGGATGCCATGGTGGCCCGAGCCAGGCGCCTCATCGAGCTTTACAAAGAAGCTGGGGTCGGCAAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | AGATGTATCTTCTCCGAGTCACTGGTCTGGGCCGCCTaGACAGAGAGCGCAGGCGCCAGCTTGCTGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: RCIFSESLVWAA*TESAGASLLLS Trigger: GGATAACAGCAAGCTGGCGCCTGCGCTCTCTGTCAAGGCGGCCCAGACCAGTGACTCGGAGAAGATACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | CCGTCGGAGAGCTTCTCCACGGCCATTTGGTCTTCGTaGTGCAGCCAACGGAAGGCCTTCTCGTCCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: PSESFSTAIWSS*CSQRKAFSSRC Trigger: ACATCTGGACGAGAAGGCCTTCCGTTGGCTGCACAACGAAGACCAAATGGCCGTGGAGAAGCTCTCCGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS GCA 72 bp | TCGGAGAGCTTCTCCACGGCCATTTGGTCTTCGTTGTaGAGCCAACGGAAGGCCTTCTCGTCCAGATGTATC | + |
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Preference number: 6 (lower is better) Translates to: SESFSTAIWSSL*SQRKAFSSRCI Trigger: GATACATCTGGACGAGAAGGCCTTCCGTTGGCTGCACAACGAAGACCAAATGGCCGTGGAGAAGCTCTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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| CDS CAA 72 bp | AGGATCAGGGATGGGTTGGTGGTGGCATCTTGGGGCTaGTATTCATCGATGGCATTGAAATCACCCGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RIRDGLVVASWG*YSSMALKSPVS Trigger: CGACACGGGTGATTTCAATGCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACCCATCCCTGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026576.5 |
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| CDS GCA 72 bp | AGAAGCAGCTGTCACCAGAGATGGAAAACAGTGCCCTaGAGCAATCCCAAGTGGATCACAGTGACAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSSCHQRWKTVP*SNPKWITVTML Trigger: GAGCATTGTCACTGTGATCCACTTGGGATTGCTGCAGGGCACTGTTTTCCATCTCTGGTGACAGCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS CCA 72 bp | TTTGTCAGAGTGACCAGAAGCAGCTGTCACCAGAGATaGAAAACAGTGCCCTGCAGCAATCCCAAGTGGATC | + |
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Preference number: 6 (lower is better) Translates to: FVRVTRSSCHQR*KTVPCSNPKWI Trigger: GATCCACTTGGGATTGCTGCAGGGCACTGTTTTCCATCTCTGGTGACAGCTGCTTCTGGTCACTCTGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS CCA 72 bp | GGTTGGTGGTGGCATCTTGGGGCTTGTATTCATCGATaGCTTTTTCTCTCAGGTGTTTGTCAGAGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: GWWWHLGACIHR*LFLSGVCQSDQ Trigger: CTGGTCACTCTGACAAACACCTGAGAGAAAAAGCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS CAA 72 bp | AGGATCAGGGATGGGTTGGTGGTGGCATCTTGGGGCTaGTATTCATCGATGGCTTTTTCTCTCAGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: RIRDGLVVASWG*YSSMAFSLRCL Trigger: CAAACACCTGAGAGAAAAAGCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACCCATCCCTGATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS TCA 72 bp | TCATCGATGGCTTTTTCTCTCAGGTGTTTGTCAGAGTaGCCAGAAGCAGCTGTCACCAGAGATGGAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: SSMAFSLRCLSE*PEAAVTRDGKQ Trigger: CTGTTTTCCATCTCTGGTGACAGCTGCTTCTGGTCACTCTGACAAACACCTGAGAGAAAAAGCCATCGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211654.2 |
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| CDS CCA 72 bp | CATCCTTATCAAAGGAAAGCCTTGCATCAACTTCTGTaGATACACGGCCTGGAATCTTCTTTAATATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HPYQRKALHQLL*IHGLESSLIFL Trigger: CAGAAATATTAAAGAAGATTCCAGGCCGTGTATCCACAGAAGTTGATGCAAGGCTTTCCTTTGATAAGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026576.5 ENSMUST00000211654.2 |
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