Pregenerated sensors for TAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028717Ensembl transcript IDs: ENSMUST00000030489.9, ENSMUST00000136946.8, ENSMUST00000161601.8, ENSMUST00000162489.2
Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGTTCACATAAGTCCATTGACCTGCTTCTCATCCCACCTGCCCTaGAGCCCAGCAACCCAGGGGCCTAAAGGCCCCTGCCTGCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: EVHISPLTCFSSHLP*SPATQGPKGPCLLA Trigger: GGCCAGCAGGCAGGGGCCTTTAGGCCCCTGGGTTGCTGGGCTTCAGGGCAGGTGGGATGAGAAGCAGGTCAATGGACTTATGTGAACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | GCATGCCCAGGTCTCAGCCAGGGCCTTGCCTCTGACTGGACTCCTTaGCTTAGCATCAGGCTGCATCTTGGGTGGTATCATGGCCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: ACPGLSQGLASDWTP*LSIRLHLGWYHGLE Trigger: CTCTAGGCCATGATACCACCCAAGATGCAGCCTGATGCTAAGGCAAGGAGTCCAGTCAGAGGCAAGGCCCTGGCTGAGACCTGGGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | CCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATaGACCAGCACTCTATCCTTTGCTCTCCTGCACAAACAGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: PGEAYGLHSPSTNMQ*TSTLSFALLHKQGC Trigger: GCATCCCTGTTTGTGCAGGAGAGCAAAGGATAGAGTGCTGGTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | GGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATaGAATGCACCAGCACTCTATCCTTTGCTCTCCTGCACAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: GFLGKPMGCTAPAPT*NAPALYPLLSCTNR Trigger: CCTGTTTGTGCAGGAGAGCAAAGGATAGAGTGCTGGTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | TGCAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTaGACAGCCCCAGCACCAACATGCAATGCACCAGCACTCTATCCT | + |
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Preference number: 1 (lower is better) Translates to: CNGKLPSGFLGKPMG*TAPAPTCNAPALYP Trigger: AGGATAGAGTGCTGGTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | CATCTTGCAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATaGGCTGCACAGCCCCAGCACCAACATGCAATGCACCAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: HLAMGSFLRASWGSL*AAQPQHQHAMHQHS Trigger: AGAGTGCTGGTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR TCA 90 bp | AAGTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGACTaGGGCAAGCCTTCGGCAGAGGGTCATGTACCACTGGGATCCCAA | + |
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Preference number: 1 (lower is better) Translates to: KCWACPQTWRAMYTD*GKPSAEGHVPLGSQ Trigger: TTGGGATCCCAGTGGTACATGACCCTCTGCCGAAGGCTTGCCTCAGTCTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| 3UTR CCA 90 bp | CAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGCAGCTaGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: QALKKAPQSLTLHSS*QAGWINMDLGEDGA Trigger: AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | AGCAAAGGTGCATGCCCAGGTCTCAGCCAGGGCCTTGCCTCTGACTaGACTCCTTGCCTTAGCATCAGGCTGCATCTTGGGTGGTATCAT | + |
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Preference number: 1 (lower is better) Translates to: SKGACPGLSQGLASD*TPCLSIRLHLGWYH Trigger: ATGATACCACCCAAGATGCAGCCTGATGCTAAGGCAAGGAGTCCAGTCAGAGGCAAGGCCCTGGCTGAGACCTGGGCATGCACCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | TGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTaGTCCTCACAGCCACAGGATAGGAAGGCAAGTCTCAGTGAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: CACTQPNKACSRLLT*SSQPQDRKASLSEG Trigger: TCCCTCACTGAGACTTGCCTTCCTATCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | CCTCCATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATaGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: PPFGHPDHQPTDILQ*EASFGLPGEAYGLH Trigger: GTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR TCA 90 bp | CTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTaGCTTGGTCCTCACAGCCACAGGATAGGAAGGCAAGTCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LSVPAHSPTKHAQGC*LGPHSHRIGRQVSV Trigger: CACTGAGACTTGCCTTCCTATCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | TTGTGTGAGGGGAGAGTACTTAAAGTTAAGCTGAGCAAAGGTGCATaGCCAGGTCTCAGCCAGGGCCTTGCCTCTGACTGGACTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: LCEGRVLKVKLSKGA*PGLSQGLASDWTPC Trigger: GCAAGGAGTCCAGTCAGAGGCAAGGCCCTGGCTGAGACCTGGGCATGCACCTTTGCTCAGCTTAACTTTAAGTACTCTCCCCTCACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | TGCGCTGGAGTTGAAACCCAGTGCCCCAAACACTCTTGCTTTGCTTaGCCTAATGTCACTTTCCCTTTCTGTGCCTGCACACAGCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: CAGVETQCPKHSCFA*PNVTFPFCACTQPN Trigger: GTTGGGCTGTGTGCAGGCACAGAAAGGGAAAGTGACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCACTGGGTTTCAACTCCAGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | TTTGTCCTCCATTTGGACATCCAGACCATCAGCCAACAGACATCTTaGAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGC | + |
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Preference number: 1 (lower is better) Translates to: FVLHLDIQTISQQTS*NGKLPSGFLGKPMG Trigger: GCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | TATTTGAACAGAAGCTGCCACAAAAGCCACCCAGCCAGCTCGGGATaGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: YLNRSCHKSHPASSG*EKGKAEANWMPQVT Trigger: TGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCATCCCGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | AAGGCACCTCAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATaGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGAAATGGTC | + |
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Preference number: 1 (lower is better) Translates to: KAPQSLTLHSSWQAG*INMDLGEDGAQEMV Trigger: GACCATTTCTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTGAGGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | CACTCTTGCTTTGCTTGCCCTAATGTCACTTTCCCTTTCTGTGCCTaGACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: HSCFACPNVTFPFCA*TQPNKACSRLLTWS Trigger: GGACCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGGGAAAGTGACATTAGGGCAAGCAAAGCAAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | CAAGAAATGGTCAGCTCTTGGGTACCTAAGTATTTGAACAGAAGCTaGCACAAAAGCCACCCAGCCAGCTCGGGATGGGAGAAAGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: QEMVSSWVPKYLNRS*HKSHPASSGWEKGK Trigger: CTTGCCTTTCTCCCATCCCGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCAAGAGCTGACCATTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | AAACAGGGATGCGCTGGAGTTGAAACCCAGTGCCCCAAACACTCTTaGTTTGCTTGCCCTAATGTCACTTTCCCTTTCTGTGCCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: KQGCAGVETQCPKHS*FACPNVTFPFCACT Trigger: TGTGCAGGCACAGAAAGGGAAAGTGACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR TCA 90 bp | GGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGTaGCAACCCCAGATCTTGTCCAAAACAAGGCTCACAAACTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: GERQGRGQLDASGNR*QPQILSKTRLTNSR Trigger: TCTAGAGTTTGTGAGCCTTGTTTTGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | AACATGGACCTGGGTGAAGATGGGGCTCAAGAAATGGTCAGCTCTTaGGTACCTAAGTATTTGAACAGAAGCTGCCACAAAAGCCACCCA | + |
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Preference number: 1 (lower is better) Translates to: NMDLGEDGAQEMVSS*VPKYLNRSCHKSHP Trigger: TGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCAAGAGCTGACCATTTCTTGAGCCCCATCTTCACCCAGGTCCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | ATAATCCAAATGACACAAACACATCAACTGCCCAGGCCTGAACTCTaGCTGGAACCTCACGGCACGGTCAGTACTAAGGGTTATGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: IIQMTQTHQLPRPEL*LEPHGTVSTKGYEA Trigger: AGCTTCATAACCCTTAGTACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTGTGTCATTTGGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR TCA 90 bp | TTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTGAGTaGCACCAATACAATGACAGATACACAGGACTTCTGCGCACTTTG | + |
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Preference number: 1 (lower is better) Translates to: FSLAQRQTLERVRTE*HQYNDRYTGLLRTL Trigger: CAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTGGTGTCACTCAGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR GCA 90 bp | AGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTTTaGCTCTTCTGTTTCCATGCAGGAAACAGAAATGCCAGCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: RPCHLQKKYLLLHSV*LFCFHAGNRNASLG Trigger: CCCTAGGCTGGCATTTCTGTTTCCTGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | GCAGAATCCCAAATAGAGTATGTACAGGACAGTTTGTCCTCCATTTaGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: AESQIEYVQDSLSSI*TSRPSANRHLAMGS Trigger: GCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAACTGTCCTGTACATACTCTATTTGGGATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | CCCATTTCCTCATGGGTCAGACCCCTTGAACTAACTCCCACGCAATaGGAAAGAACCAGCCTTAATGTTCATGTGATAGCAGAATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: PISSWVRPLELTPTQ*ERTSLNVHVIAECD Trigger: ATCACATTCTGCTATCACATGAACATTAAGGCTGGTTCTTTCCCATTGCGTGGGAGTTAGTTCAAGGGGTCTGACCCATGAGGAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR TCA 90 bp | CTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTGTGAACTaGAACATCATGCTGAAACTCCAACAGAAAAGTGATGGGCTCATA | + |
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Preference number: 1 (lower is better) Translates to: LCLPKSILRLHHGVN*NIMLKLQQKSDGLI Trigger: TATGAGCCCATCACTTTTCTGTTGGAGTTTCAGCATGATGTTTCAGTTCACACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 90 bp | TTCTTTAAGGGCAAGGAAGACACAGAGGAAGAAAGATATGGGGTATaGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: FFKGKEDTEEERYGV*SMRTEFRVFLRSYK Trigger: TTTGTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCTTTCTTCCTCTGTGTCTTCCTTGCCCTTAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR CCA 90 bp | AAACTTTCGAAATCTCTCACCCCTTCTCACTCCTGTTTCTTGCCTTaGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: KLSKSLTPSHSCFLP*NRGEIKINLEKLAS Trigger: AGATGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACAGGAGTGAGAAGGGGTGAGAGATTTCGAAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCAGGGCCTAAAGGCCCCTaGCTGCTGGCCCTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AEANWMPQVTGDNPRSCPGPKGP*LLALGS Trigger: GCTGCCCAGGGCCAGCAGGCAGGGGCCTTTAGGCCC...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATGCACGCTTCTCATCCCACCTaGCCTGAAGCCCAGCAACCC | + |
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Preference number: 2 (lower is better) Translates to: ASWGSLWAAQPQHQHAMHASHPT*PEAQQP Trigger: GGGTTGCTGGGCTTCAGGGCAGGTGGGATGAGAAGC...GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCTCCTGGGGAAGCCTATaGGCTGCACAGCCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QTHQLPRPELWLEPHGTVSWGSL*AAQPQH Trigger: GTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGA...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATGGGCCTAAAGGCCCCTaGCTGCTGGCCCTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GSRNRISLCLPKSILRLHGPKGP*LLALGS Trigger: GCTGCCCAGGGCCAGCAGGCAGGGGCCTTTAGGCCC...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCAGGATCAACATGGACCTaGGTGAAGATGGGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GKLPSGFLGKPMGCTAPAGSTWT*VKMGLK Trigger: CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCC...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCATCATCCCACCTGCCCTaGAGCCCAGCAACCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: AEANWMPQVTGDNPRSCPSSHLP*SPATQG Trigger: CCCCTGGGTTGCTGGGCTTCAGGGCAGGTGGGATGA...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCCATGCTCAAGGCTGCTaGCTTGGTCCTCACAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QTHQLPRPELWLEPHGTVHAQGC*LGPHSH Trigger: GTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATG...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCATATCCTTTGCTCTCCTaGACAAACAGGGATGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: GKLPSGFLGKPMGCTAPAYPLLS*TNRDAL Trigger: CAGCGCATCCCTGTTTGTGCAGGAGAGCAAAGGATA...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGCCAGCCAGCTCGGGATaGGAGAAAGGCAAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKPASSG*EKGKAE Trigger: CTCTGCCTTGCCTTTCTCCCATCCCGAGCTGGCTGG...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGACTGAGGCAAGCCCAAAGACCAAAACCCTaGCTCTTCCCTGCCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLGLPTDMACYVHRLRQAQRPKP*LFPAQP Trigger: GGGCTGGGCAGGGAAGAGCCAGGGTTTTGGTCTTTG...GGCTTGCCTCAGTCTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCCCCGCCCGCCTCAGGTAACAGGTaGCAACCCCAGATCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: FVPVLGVEHRTPCVQSPPASGNR*QPQILS Trigger: GGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGC...GGGCGGGGATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTGGGCCTAAAGGCCCCTaGCTGCTGGCCCTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RNRISLCLPKSILRLHHGGPKGP*LLALGS Trigger: GCTGCCCAGGGCCAGCAGGCAGGGGCCTTTAGGCCC...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCATGCCCCAAACACTCTTaGTTTGCTTGCCCTAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: GKLPSGFLGKPMGCTAPACPKHS*FACPNV Trigger: GACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCA...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGGGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCGGGAAGCCTATGGGCTaGACAGCCCCAGCACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: GRGAGTGSVSVCLSLYSGGKPMG*TAPAPT Trigger: TGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCC...GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACAGCCTAGGGTCAGTTaGGACTTCCCAAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GKLPSGFLGKPMGCTAPAQPRVS*DFPKFK Trigger: TTTGAACTTTGGGAAGTCCCAACTGACCCTAGGCTG...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCCCCGCCCAGAGCTCTGATTCCCTaGAGCAAAAGGGGCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FVPVLGVEHRTPCVQSPPRALIP*SKRGCW Trigger: CCAACAGCCCCTTTTGCTCCAGGGAATCAGAGCTCT...GGGCGGGGATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAATCGGTCCCACCACCTaGATTGACACAGGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HINCPGLNSGWNLTARSVIGPTT*IDTGEK Trigger: TTTCTCCCCTGTGTCAATCCAGGTGGTGGGACCGAT...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTAAAGGCCCCTGCCTaGTGGCCCTGGGCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLLKAPA*WPWAAP Trigger: TGGGGCTGCCCAGGGCCAGCAGGCAGGGGCCTTTAG...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACTACTTCACTCTGTTTaGCTCTTCTGTTTCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: GKLPSGFLGKPMGCTAPALLHSV*LFCFHA Trigger: TGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAG...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAGCTGATGTAGGGAACTaGAGCTTAGGCTCCCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: HINCPGLNSGWNLTARSVADVGN*SLGSQQ Trigger: TTGTTGGGAGCCTAAGCTGCAGTTCCCTACATCAGC...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCCCCGCCCGGAAATCTTTGGGCTTaGGAAAGGGAGAAGACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: FVPVLGVEHRTPCVQSPPGNLWA*EREKTV Trigger: CACGGTCTTCTCCCTTTCCCAAGCCCAAAGATTTCC...GGGCGGGGATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCCCAGCCAGCTCGGGATaGGAGAAAGGCAAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GAGTGSVSVCLSLYSGSIPASSG*EKGKAE Trigger: CTCTGCCTTGCCTTTCTCCCATCCCGAGCTGGCTGG...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTATCATCCCACCTGCCCTaGAGCCCAGCAACCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLSSHLP*SPATQG Trigger: CCCCTGGGTTGCTGGGCTTCAGGGCAGGTGGGATGA...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCCATGCTCAAGGCTGCTaGCTTGGTCCTCACAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GAGTGSVSVCLSLYSGSIHAQGC*LGPHSH Trigger: GTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATG...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTTGCAGGAAACAGAAATaGCAGCCTAGGGTCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HSSWQAGWINMDLGEDGACRKQK*QPRVSW Trigger: CCAACTGACCCTAGGCTGGCATTTCTGTTTCCTGCA...AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCCAGCCCAACAAAGCATaGTCAAGGCTGCTGACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GRGAGTGSVSVCLSLYSGQPNKA*SRLLTW Trigger: CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTG...GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCCATTGGGGAAATCTTTaGGCTTGGGAAAGGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QTHQLPRPELWLEPHGTVHWGNL*AWEREK Trigger: CTTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATG...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTGACGCAAAGTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGTCAAGGCTGCTGACTTaGTCCTCACAGCCACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLTQSAGLAHRHGVLCTQSRLLT*SSQPQD Trigger: ATCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGA...CTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCACTTTGCGTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| 3UTR CAA 90 bp | AGGGATGCGCTGGAGTTGAAACCCAGTGCCCCAAACACTCTTGCTTaGCTTGCCCTAATGTCACTTTCCCTTTCTGTGCCTGCACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RDALELKPSAPNTLA*LALMSLSLSVPAHS Trigger: GCTGTGTGCAGGCACAGAAAGGGAAAGTGACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CAA 90 bp | GTTTGTCCTCCATTTGGACATCCAGACCATCAGCCAACAGACATCTaGCAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: VCPPFGHPDHQPTDI*QWEASFGLPGEAYG Trigger: CCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTTATTTGAACAGAAGCTaGCACAAAAGCCACCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: HSSWQAGWINMDLGEDGAYLNRS*HKSHPA Trigger: GGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATA...AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGCATTGGGGAAATCTTTaGGCTTGGGAAAGGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKHWGNL*AWEREK Trigger: CTTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATG...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGCTGGCAAGCTGGATaGATCAACATGGACCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: AIFSNQALKKAPQSLTLHSWQAG*INMDLG Trigger: ACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCT...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CAA 90 bp | GAAGATGGGGCTCAAGAAATGGTCAGCTCTTGGGTACCTAAGTATTaGAACAGAAGCTGCCACAAAAGCCACCCAGCCAGCTCGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: EDGAQEMVSSWVPKY*NRSCHKSHPASSGW Trigger: CCATCCCGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCAAGAGCTGACCATTTCTTGAGCCCCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAGTGACACCAATACAATaGCAGATACACAGGACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HINCPGLNSGWNLTARSVVTPIQ*QIHRTS Trigger: AGAAGTCCTGTGTATCTGTCATTGTATTGGTGTCAC...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGTGCAGGAAACAGAAATaGCAGCCTAGGGTCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSLTLHSSWQAGWINMDLCRKQK*QPRVSW Trigger: CCAACTGACCCTAGGCTGGCATTTCTGTTTCCTGCA...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTATTTGAACAGAAGCTaGCACAAAAGCCACCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRGAGTGSVSVCLSLYSGYLNRS*HKSHPA Trigger: GGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATA...GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTGGGAAGCCTATGGGCTaGACAGCCCCAGCACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: IWTSRPSANRHLAMGSFLGKPMG*TAPAPT Trigger: TGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCC...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCCAGCCTAGGGTCAGTTaGGACTTCCCAAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRGAGTGSVSVCLSLYSGQPRVS*DFPKFK Trigger: TTTGAACTTTGGGAAGTCCCAACTGACCCTAGGCTG...GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATAGCTGGCAAGCTGGATaGATCAACATGGACCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GSRNRISLCLPKSILRLHSWQAG*INMDLG Trigger: ACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCT...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCACTCTCCACAGCAGCTaGCAAGCTGGATGGATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GAGTGSVSVCLSLYSGSITLHSS*QAGWIN Trigger: GTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGT...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCAGAGCTCTGATTCCCTaGAGCAAAAGGGGCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GAGTGSVSVCLSLYSGSIRALIP*SKRGCW Trigger: CCAACAGCCCCTTTTGCTCCAGGGAATCAGAGCTCT...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATATCGGTCCCACCACCTaGATTGACACAGGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSRNRISLCLPKSILRLHIGPTT*IDTGEK Trigger: TTTCTCCCCTGTGTCAATCCAGGTGGTGGGACCGAT...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAACTCAGGCTCCATCATaGTGTGAACTGAAACATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HINCPGLNSGWNLTARSVTQAPS*CELKHH Trigger: ATGATGTTTCAGTTCACACCATGATGGAGCCTGAGT...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTGGGTACCTAAGTATTTaGACAGAAGCTGCCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HSSWQAGWINMDLGEDGAGYLSI*TEAATK Trigger: TTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCC...AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTCTAAAGGCCCCTGCCTaGTGGCCCTGGGCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LMLTFPPLYRYCSWNAAILKAPA*WPWAAP Trigger: TGGGGCTGCCCAGGGCCAGCAGGCAGGGGCCTTTAG...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTGCTTCTCATCCCACCTaGCCTGAAGCCCAGCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: PLDIFSLAQRQTLERVRTASHPT*PEAQQP Trigger: GGGTTGCTGGGCTTCAGGGCAGGTGGGATGAGAAGC...AGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATTGCAGGAAACAGAAATaGCAGCCTAGGGTCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSRNRISLCLPKSILRLHCRKQK*QPRVSW Trigger: CCAACTGACCCTAGGCTGGCATTTCTGTTTCCTGCA...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTCTTTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCTTCCCTTTCTGTGCCTaGACACAGCCCAACAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFFCACAGCRTQNPVCAIFPFCA*TQPNKA Trigger: TGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGGGAA...GATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAAAGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCAGCACTCTATCCTTTaGTCTCCTGCACAAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GSRNRISLCLPKSILRLHQHSIL*SPAQTG Trigger: CCCTGTTTGTGCAGGAGAGCAAAGGATAGAGTGCTG...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGCAGCCTAGGGTCAGTTaGGACTTCCCAAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSLTLHSSWQAGWINMDLQPRVS*DFPKFK Trigger: TTTGAACTTTGGGAAGTCCCAACTGACCCTAGGCTG...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCGAAATGGTCAGCTCTTaGGTACCTAAGTATTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QTHQLPRPELWLEPHGTVEMVSS*VPKYLN Trigger: GTTCAAATACTTAGGTACCCAAGAGCTGACCATTTC...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGAAAGGGAGAAGACCGTaGCATCTTCAGAAAAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: PFCACTQPNKACSRLLTWKGRRP*HLQKKY Trigger: GTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTT...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCACAGACATCTTGCAATaGGAAGCTTCCTTCGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GAGTGSVSVCLSLYSGSITDILQ*EASFGL Trigger: AAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGT...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACCTACTTCACTCTGTTTaGCTCTTCTGTTTCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: AIFSNQALKKAPQSLTLHLLHSV*LFCFHA Trigger: TGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAG...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGAAAGGGAGAAGACCGTaGCATCTTCAGAAAAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: QSLTLHSSWQAGWINMDLKGRRP*HLQKKY Trigger: GTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTT...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTCACTTTCCCTTTCTGTaGCTGCACACAGCCCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: RNRISLCLPKSILRLHHGHFPFL*LHTAQQ Trigger: TTGTTGGGCTGTGTGCAGGCACAGAAAGGGAAAGTG...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATCCAGCCAGCTCGGGATaGGAGAAAGGCAAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NDRYTGLLRTLFHELELHPASSG*EKGKAE Trigger: CTCTGCCTTGCCTTTCTCCCATCCCGAGCTGGCTGG...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACCATGCTCAAGGCTGCTaGCTTGGTCCTCACAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYHAQGC*LGPHSH Trigger: GTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATG...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTAAACCCTGGAGAGAGTaGGAACTGAGTGACACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RNRISLCLPKSILRLHHGKPWRE*ELSDTN Trigger: ATTGGTGTCACTCAGTTCTCACTCTCTCCAGGGTTT...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTTGCCCCAAACACTCTTaGTTTGCTTGCCCTAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: RNRISLCLPKSILRLHHGCPKHS*FACPNV Trigger: GACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCA...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTGGCCTATAGGCTGTACAAATATCAAGGTACCCGGAGTAGTTACTCCTCTAGGCTGCATCTTGGGTaGTATCATGGCCTAGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VLAYRLYKYQGTRSSYSSRLHLG*YHGLEL Trigger: CAACTCTAGGCCATGATACCACCCAAGATGCAGCCT...AGAGGAGTAACTACTCCGGGTACCTTGATATTTGTACAGCCTATAGGCCAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR CAA 90 bp | GGCAGAATCCCAAATAGAGTATGTACAGGACAGTTTGTCCTCCATTaGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRIPNRVCTGQFVLH*DIQTISQQTSCNGK Trigger: CTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAACTGTCCTGTACATACTCTATTTGGGATTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTGGGATGCGCTGGAGTTaGAACCCAGTGCCCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LMLTFPPLYRYCSWNAAIGMRWS*NPVPQT Trigger: TGTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCC...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTTATTTGAACAGAAGCTaGCACAAAAGCCACCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: IWTSRPSANRHLAMGSFLYLNRS*HKSHPA Trigger: GGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATA...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGGGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCCTTTACAAAATGACTTaGAGGGGTTGTGTCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRGAGTGSVSVCLSLYSGLYKMT*RGCVFK Trigger: TTTAAAGACACAACCCCTGCAAGTCATTTTGTAAAG...GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACCAACACAGTTCATTACATACAGTACGACACTGACGCAAAGTGCTGGGCTTCTCACTCCTGTTTCTTaGCTTGGAATCGGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RPTQFITYSTTLTQSAGLLTPVS*LGIGEK Trigger: TTTCTCCCCGATTCCAAGGCAAGAAACAGGAGTGAG...AAGCCCAGCACTTTGCGTCAGTGTCGTACTGTATGTAATGAACTGTGTTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTCATTGGGGAAATCTTTaGGCTTGGGAAAGGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IWTSRPSANRHLAMGSFLHWGNL*AWEREK Trigger: CTTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATG...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACGGATCAACATGGACCTaGGTGAAGATGGGGCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HTLHDGAFGYFLSSSKANGSTWT*VKMGLK Trigger: CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCC...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCACCCAGGCCTGAACTCTaGCTGGAACCTCACGGCACG | + |
|
Preference number: 2 (lower is better) Translates to: CFLPWNRGEIKINLEKLAPRPEL*LEPHGT Trigger: CGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGG...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR CAA 90 bp | AAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTTaGCCTCTTCTGTTTCCATGCAGGAAACAGAAATGCCAGCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: KTVPSSEKVPTTSLC*PLLFPCRKQKCQPR Trigger: CCTAGGCTGGCATTTCTGTTTCCTGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTGCCTCAGGTAACAGGTaGCAACCCCAGATCTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCASGNR*QPQILS Trigger: GGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGC...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACTTTCCAACCAGGCCCTaGAGAAGGCACCTCAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYFPTRP*RRHLKA Trigger: AGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAA...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR CAA 90 bp | ACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTaGAACTTCATTATAGGCAGGCCTAGCTTTAGGATAGATCGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TMTDTQDFCALCFMS*NFIIGRPSFRIDRS Trigger: GGACCGATCTATCCTAAAGCTAGGCCTGCCTATAATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTACTGAAACATCATGCTaGAACTCCAACAGAAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RNRISLCLPKSILRLHHGTETSC*NSNRKV Trigger: CACTTTTCTGTTGGAGTTTCAGCATGATGTTTCAGT...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTCAGCCCAACAAAGCATaGTCAAGGCTGCTGACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LMLTFPPLYRYCSWNAAIQPNKA*SRLLTW Trigger: CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTG...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACACTTTCCCTTTCTGTaGCTGCACACAGCCCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: QYNDRYTGLLRTLFHELEHFPFL*LHTAQQ Trigger: TTGTTGGGCTGTGTGCAGGCACAGAAAGGGAAAGTG...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACGGAGTTGAAACCCAGTaGCCCAAACACTCTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HTLHDGAFGYFLSSSKANGVETQ*PKHSCF Trigger: AAAGCAAGAGTGTTTGGGGCACTGGGTTTCAACTCC...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACTATCCTTTGCTCTCCTaGACAAACAGGGATGCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYYPLLS*TNRDAL Trigger: CAGCGCATCCCTGTTTGTGCAGGAGAGCAAAGGATA...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGGGAAATCTTTGGGCTTaGGAAAGGGAGAAGACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: SPFVQILFLECCNFFKGKGNLWA*EREKTV Trigger: CACGGTCTTCTCCCTTTCCCAAGCCCAAAGATTTCC...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTACTCTCCACAGCAGCTaGCAAGCTGGATGGATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCTLHSS*QAGWIN Trigger: GTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGT...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTAGAGCTCTGATTCCCTaGAGCAAAAGGGGCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCRALIP*SKRGCW Trigger: CCAACAGCCCCTTTTGCTCCAGGGAATCAGAGCTCT...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTTTGCCAACCAACAACTaGTCAGGCAGAATCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PLDIFSLAQRQTLERVRTLPTNN*SGRIPN Trigger: ATTTGGGATTCTGCCTGACCAGTTGTTGGTTGGCAA...AGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACGGATCAGTCTCTGTCTaGCTAAGTCTATACTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYGSVSV*LSLYSG Trigger: GCCTGAGTATAGACTTAGGCAGACAGAGACTGATCC...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTGCTGATGTAGGGAACTaGAGCTTAGGCTCCCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LMLTFPPLYRYCSWNAAIADVGN*SLGSQQ Trigger: TTGTTGGGAGCCTAAGCTGCAGTTCCCTACATCAGC...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATACAGACATCTTGCAATaGGAAGCTTCCTTCGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NDRYTGLLRTLFHELELHTDILQ*EASFGL Trigger: AAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGT...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTAGGCTGCATCTTGGGTaGTATCATGGCCTAGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMLTFPPLYRYCSWNAAIRLHLG*YHGLEL Trigger: CAACTCTAGGCCATGATACCACCCAAGATGCAGCCT...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCTACTTCACTCTGTTTaGCTCTTCTGTTTCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: HTLHDGAFGYFLSSSKANLLHSV*LFCFHA Trigger: TGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAG...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTGGAGTTGAAACCCAGTaGCCCAAACACTCTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCGVETQ*PKHSCF Trigger: AAAGCAAGAGTGTTTGGGGCACTGGGTTTCAACTCC...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCACACAAACACATCAACTaGCCAGGCCTGAACTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CFLPWNRGEIKINLEKLAHKHIN*PGLNSG Trigger: GCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTGTG...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCAAGCTGGCAAGCTGGATaGATCAACATGGACCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CFLPWNRGEIKINLEKLASWQAG*INMDLG Trigger: ACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCT...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCAACTCTCCACAGCAGCTaGCAAGCTGGATGGATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CFLPWNRGEIKINLEKLATLHSS*QAGWIN Trigger: GTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGT...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAAAGGTTGTCTGTTTACTaGCCATCTTTTCCAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QYNDRYTGLLRTLFHELERLSVY*PSFPTR Trigger: CCTGGTTGGAAAAGATGGCCAGTAAACAGACAACCT...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATAGGTTGTCTGTTTACTaGCCATCTTTTCCAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NDRYTGLLRTLFHELELHRLSVY*PSFPTR Trigger: CCTGGTTGGAAAAGATGGCCAGTAAACAGACAACCT...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATTTGCCAACCAACAACTaGTCAGGCAGAATCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NDRYTGLLRTLFHELELHLPTNN*SGRIPN Trigger: ATTTGGGATTCTGCCTGACCAGTTGTTGGTTGGCAA...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACACTCCAACAGAAAAGTaGTGGGCTCATACGTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYTPTEK*WAHTLH Trigger: ATGTAACGTATGAGCCCATCACTTTTCTGTTGGAGT...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATAAAGGGAGAAGACCGTaGCATCTTCAGAAAAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: NDRYTGLLRTLFHELELHKGRRP*HLQKKY Trigger: GTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTT...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCATTCCCTTTCTGTGCCTaGACACAGCCCAACAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CFLPWNRGEIKINLEKLAFPFCA*TQPNKA Trigger: TGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGGGAA...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACGAAATGGTCAGCTCTTaGGTACCTAAGTATTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HTLHDGAFGYFLSSSKANEMVSS*VPKYLN Trigger: GTTCAAATACTTAGGTACCCAAGAGCTGACCATTTC...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CAA 90 bp | ATGTTTTCTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTaGGAATGCTGCAATTTCTTTAAGGGCAAGGAAGACACAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: MFSHAYISPFVQILF*ECCNFFKGKEDTEE Trigger: TTCCTCTGTGTCTTCCTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAGAAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR CCA 72 bp | ATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATaGGCTGCACAGCCCCAGCACCAACATGCAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MGSFLRASWGSL*AAQPQHQHAMH Trigger: GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAAAGGCACCTCAAAGCTaGACTCTCCACAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HINCPGLNSGWNLTARSVKAPQS*TLHSSW Trigger: CCAGCTGCTGTGGAGAGTCAAGCTTTGAGGTGCCTT...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR CCA 72 bp | AGAAGCTGCCACAAAAGCCACCCAGCCAGCTCGGGATaGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSCHKSHPASSG*EKGKAEANWMP Trigger: AGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCATCCCGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | AGACATCTTGCAATGGGAAGCTTCCTTCGGGCTTCCTaGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: RHLAMGSFLRAS*GSLWAAQPQHQ Trigger: TTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATGTCTCAGCCAGGGCCTaGCCTCTGACTGGACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSRNRISLCLPKSILRLHVSARA*PLTGLL Trigger: AAGGAGTCCAGTCAGAGGCAAGGCCCTGGCTGAGAC...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR TCA 72 bp | CCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTaGCTTGGTCCTCACAGCCACAGGATAGGAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PAHSPTKHAQGC*LGPHSHRIGRQ Trigger: TTGCCTTCCTATCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACCAAGGCAGAGGCCAATaGGATGCCTCAGGTAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIFSNQALKKAPQSLTLHQGRGQ*DASGNR Trigger: CCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTG...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGCAAGGCAGAGGCCAATaGGATGCCTCAGGTAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSLTLHSSWQAGWINMDLQGRGQ*DASGNR Trigger: CCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTG...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR GCA 72 bp | GTCAGCTCTTGGGTACCTAAGTATTTGAACAGAAGCTaGCACAAAAGCCACCCAGCCAGCTCGGGATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSSWVPKYLNRS*HKSHPASSGWE Trigger: CTCCCATCCCGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCAAGAGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | CTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATaGACCTGGGTGAAGATGGGGCTCAAGAAATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSTAAGKLDGST*TWVKMGLKKWS Trigger: TGACCATTTCTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATaGATCAACATGGACCTGGGTGAAGATGGGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSLTLHSSWQAG*INMDLGEDGAQ Trigger: TTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | ACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTaGTCCTCACAGCCACAGGATAGGAAGGCAAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQPNKACSRLLT*SSQPQDRKASL Trigger: GAGACTTGCCTTCCTATCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | GGACATCCAGACCATCAGCCAACAGACATCTTGCAATaGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GHPDHQPTDILQ*EASFGLPGEAY Trigger: ATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | CACAAACACATCAACTGCCCAGGCCTGAACTCTGGCTaGAACCTCACGGCACGGTCAGTACTAAGGGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: HKHINCPGLNSG*NLTARSVLRVM Trigger: CATAACCCTTAGTACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR CCA 72 bp | ATGACACAAACACATCAACTGCCCAGGCCTGAACTCTaGCTGGAACCTCACGGCACGGTCAGTACTAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MTQTHQLPRPEL*LEPHGTVSTKG Trigger: ACCCTTAGTACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTGTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCAGGGAAATCTTTGGGCTaGGGAAAGGGAGAAGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: AEANWMPQVTGDNPRSCPGKSLG*GKGEDR Trigger: ACGGTCTTCTCCCTTTCCCAAGCCCAAAGATTTCCC...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGTCATTGGGGAAATCTTaGGGCTTGGGAAAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKSLGKS*GLGKGE Trigger: TTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATGA...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCAAGGCACCTCAAAGCTaGACTCTCCACAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAGTGSVSVCLSLYSGSIKAPQS*TLHSSW Trigger: CCAGCTGCTGTGGAGAGTCAAGCTTTGAGGTGCCTT...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR TCA 72 bp | TCACAGTCCGTCCACCGCCTAGCGTGTTTATCCCAGTaGAGCTGCAAAGCTGATGTAGGGAACTGCAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQSVHRLACLSQ*SCKADVGNCSL Trigger: TAAGCTGCAGTTCCCTACATCAGCTTTGCAGCTTCACTGGGATAAACACGCTAGGCGGTGGACGGACTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR GCA 72 bp | CATTTGGACATCCAGACCATCAGCCAACAGACATCTTaGAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLDIQTISQQTS*NGKLPSGFLGK Trigger: CTTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CCA 72 bp | ACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTaGGTGAAGATGGGGCTCAAGAAATGGTCAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TAAGKLDGSTWT*VKMGLKKWSAL Trigger: AAGAGCTGACCATTTCTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR-3UTR CAA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGGGGAAATCTTTGGGCTaGGGAAAGGGAGAAGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQGKSLG*GKGEDR Trigger: ACGGTCTTCTCCCTTTCCCAAGCCCAAAGATTTCCC...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGTTCACATAAGTCCATaGACCTGCTTCTCATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QSLTLHSSWQAGWINMDLVHISP*TCFSSH Trigger: GTGGGATGAGAAGCAGGTCAATGGACTTATGTGAAC...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTAGGGATGCGCTGGAGTaGAAACCCAGTGCCCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IWTSRPSANRHLAMGSFLRDALE*KPSAPN Trigger: GTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCCT...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGACTGAGGCAAGCCCTGTGCCCTTGGTTTTaGTTTCTGGAAAAGGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLGLPTDMACYVHRLRQALCPWF*FLEKDK Trigger: TTTATCCTTTTCCAGAAACAAAAACCAAGGGCACAG...GGCTTGCCTCAGTCTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR TCA 72 bp | AGAGACCAACACAGTTCATTACATACAGTACGACACTaGCGCAAAGTGCTGGGCTTGCCCACAGACATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: RDQHSSLHTVRH*RKVLGLPTDMA Trigger: CGCCATGTCTGTGGGCAAGCCCAGCACTTTGCGTCAGTGTCGTACTGTATGTAATGAACTGTGTTGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCCTAGTTGAGAGCAGGTaGTCTGTTTACTGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GAGTGSVSVCLSLYSGSILVESR*SVYWPS Trigger: AGATGGCCAGTAAACAGACAACCTGCTCTCAACTAG...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTAGGGATGCGCTGGAGTaGAAACCCAGTGCCCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLDIFSLAQRQTLERVRTRDALE*KPSAPN Trigger: GTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCCT...AGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR GCA 72 bp | GTTGAAACCCAGTGCCCCAAACACTCTTGCTTTGCTTaGCCTAATGTCACTTTCCCTTTCTGTGCCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VETQCPKHSCFA*PNVTFPFCACT Trigger: TGTGCAGGCACAGAAAGGGAAAGTGACATTAGGGCAAGCAAAGCAAGAGTGTTTGGGGCACTGGGTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGACTACTTCACTCTGTTaGCCTCTTCTGTTTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQTTSLC*PLLFPC Trigger: GCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAGT...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTCAGTTTGTCCTCCATTaGGACATCCAGACCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RNRISLCLPKSILRLHHGQFVLH*DIQTIS Trigger: GCTGATGGTCTGGATGTCCAAATGGAGGACAAACTG...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR TCA 72 bp | GTGATAGGAGACAAAGAATCACAATGCCTTAGTAGCTaGCCACATTGTCCCATTACCTGGGGGCCCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VIGDKESQCLSS*PHCPITWGPSV Trigger: TACTGAGGGCCCCCAGGTAATGGGACAATGTGGTCAGCTACTAAGGCATTGTGATTCTTTGTCTCCTATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | GGGTGGTATCATGGCCTAGAGTTGCCAACCAACAACTaGTCAGGCAGAATCCCAAATAGAGTATGTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GWYHGLELPTNN*SGRIPNRVCTG Trigger: TCCTGTACATACTCTATTTGGGATTCTGCCTGACCAGTTGTTGGTTGGCAACTCTAGGCCATGATACCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | GGTCCCACCACCTGGATTGACACAGGGGAGAAACAATaGGGTATTTGTCCATACTACAAAAGGATTCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPTTWIDTGEKQ*GICPYYKRILH Trigger: GTGGAGAATCCTTTTGTAGTATGGACAAATACCCCATTGTTTCTCCCCTGTGTCAATCCAGGTGGTGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTCTAGTTGAGAGCAGGTaGTCTGTTTACTGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RNRISLCLPKSILRLHHGLVESR*SVYWPS Trigger: AGATGGCCAGTAAACAGACAACCTGCTCTCAACTAG...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATCTCAAGGCTGCTGACTaGGTCCTCACAGCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NDRYTGLLRTLFHELELHLKAAD*VLTATG Trigger: TCCTGTGGCTGTGAGGACCAAGTCAGCAGCCTTGAG...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGAGGGATGCGCTGGAGTaGAAACCCAGTGCCCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPFVQILFLECCNFFKGKRDALE*KPSAPN Trigger: GTTTGGGGCACTGGGTTTCAACTCCAGCGCATCCCT...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTGGCCTATAGGCTGTACAAATATCAAGGTACCCGGAGTAGTTACTCCTCTCAGTTTGTCCTCCATTaGGACATCCAGACCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLAYRLYKYQGTRSSYSSQFVLH*DIQTIS Trigger: GCTGATGGTCTGGATGTCCAAATGGAGGACAAACTG...AGAGGAGTAACTACTCCGGGTACCTTGATATTTGTACAGCCTATAGGCCAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTGTCTCAGCCAGGGCCTaGCCTCTGACTGGACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LMLTFPPLYRYCSWNAAIVSARA*PLTGLL Trigger: AAGGAGTCCAGTCAGAGGCAAGGCCCTGGCTGAGAC...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTGGACTTCTGCGCACTTaGTTTCATGAGCTTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: RNRISLCLPKSILRLHHGGLLRT*FHELEL Trigger: AAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCC...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR TCA 72 bp | GCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTGAGTaGCACCAATACAATGACAGATACACAGGACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AQRQTLERVRTE*HQYNDRYTGLL Trigger: CAGAAGTCCTGTGTATCTGTCATTGTATTGGTGTCACTCAGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | ACACTTGAGCCTCATCATTGGGGAAATCTTTGGGCTTaGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLEPHHWGNLWA*EREKTVPSSEK Trigger: TTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATGATGAGGCTCAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | TCATGGGTCAGACCCCTTGAACTAACTCCCACGCAATaGGAAAGAACCAGCCTTAATGTTCATGTGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SWVRPLELTPTQ*ERTSLNVHVIA Trigger: TGCTATCACATGAACATTAAGGCTGGTTCTTTCCCATTGCGTGGGAGTTAGTTCAAGGGGTCTGACCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTGTTCACATAAGTCCATaGACCTGCTTCTCATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EREKTVPSSEKVPTTSLCVHISP*TCFSSH Trigger: GTGGGATGAGAAGCAGGTCAATGGACTTATGTGAAC...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTTGGGTACCTAAGTATTaGAACAGAAGCTGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RNRISLCLPKSILRLHHGWVPKY*NRSCHK Trigger: TTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCA...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTAAGGCACCTCAAAGCTaGACTCTCCACAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCKAPQS*TLHSSW Trigger: CCAGCTGCTGTGGAGAGTCAAGCTTTGAGGTGCCTT...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATGTCCCACCACCTGGATaGACACAGGGGAGAAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: NDRYTGLLRTLFHELELHVPPPG*TQGRNN Trigger: ATTGTTTCTCCCCTGTGTCAATCCAGGTGGTGGGAC...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACGTCCCACCACCTGGATaGACACAGGGGAGAAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYVPPPG*TQGRNN Trigger: ATTGTTTCTCCCCTGTGTCAATCCAGGTGGTGGGAC...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTGGCCTATAGGCTGTACAAATATCAAGGTACCCGGAGTAGTTACTCCTCTTGGGTACCTAAGTATTaGAACAGAAGCTGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLAYRLYKYQGTRSSYSSWVPKY*NRSCHK Trigger: TTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCA...AGAGGAGTAACTACTCCGGGTACCTTGATATTTGTACAGCCTATAGGCCAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACAGTTTGTCCTCCATTaGGACATCCAGACCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QYNDRYTGLLRTLFHELEQFVLH*DIQTIS Trigger: GCTGATGGTCTGGATGTCCAAATGGAGGACAAACTG...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR TCA 72 bp | GAACTGAAACATCATGCTGAAACTCCAACAGAAAAGTaGTGGGCTCATACGTTACATGATGGGGCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELKHHAETPTEK*WAHTLHDGAFG Trigger: TCCAAAGGCCCCATCATGTAACGTATGAGCCCATCACTTTTCTGTTGGAGTTTCAGCATGATGTTTCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CCA 72 bp | CAAATAGAGTATGTACAGGACAGTTTGTCCTCCATTTaGACATCCAGACCATCAGCCAACAGACATCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QIEYVQDSLSSI*TSRPSANRHLA Trigger: TGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAACTGTCCTGTACATACTCTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAAGTTCACATAAGTCCATaGACCTGCTTCTCATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QYNDRYTGLLRTLFHELEVHISP*TCFSSH Trigger: GTGGGATGAGAAGCAGGTCAATGGACTTATGTGAAC...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGTCATTGGGGAAATCTTaGGGCTTGGGAAAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPFVQILFLECCNFFKGKSLGKS*GLGKGE Trigger: TTCTCCCTTTCCCAAGCCCAAAGATTTCCCCAATGA...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAAACTACTTCACTCTGTTaGCCTCTTCTGTTTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: QYNDRYTGLLRTLFHELETTSLC*PLLFPC Trigger: GCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAGT...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGTATGTACAGGACAGTTaGTCCTCCATTTGGACATCC | + |
|
Preference number: 3 (lower is better) Translates to: SPFVQILFLECCNFFKGKYVQDS*SSIWTS Trigger: GGATGTCCAAATGGAGGACAAACTGTCCTGTACATA...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR TCA 72 bp | CCTAAGTCTATACTCAGGCTCCATCATGGTGTGAACTaGAACATCATGCTGAAACTCCAACAGAAAAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PKSILRLHHGVN*NIMLKLQQKSD Trigger: ATCACTTTTCTGTTGGAGTTTCAGCATGATGTTTCAGTTCACACCATGATGGAGCCTGAGTATAGACTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR GCA 72 bp | CATCTTCAGAAAAAGTACCTACTACTTCACTCTGTTTaGCTCTTCTGTTTCCATGCAGGAAACAGAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLQKKYLLLHSV*LFCFHAGNRNA Trigger: GGCATTTCTGTTTCCTGCATGGAAACAGAAGAGGCAAACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR GCA 72 bp | TTTCGAAATCTCTCACCCCTTCTCACTCCTGTTTCTTaGCTTGGAATCGGGGAGAAATTAAGATTAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRNLSPLLTPVS*LGIGEKLRLIL Trigger: CAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACAGGAGTGAGAAGGGGTGAGAGATTTCGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACTACATGATGGGGCCTTaGGATATTTTCTCTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYYMMGP*DIFSLA Trigger: AGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTA...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTTGGGTACCTAAGTATTaGAACAGAAGCTGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCWVPKY*NRSCHK Trigger: TTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCA...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCACTAGTTGAGAGCAGGTaGTCTGTTTACTGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CFLPWNRGEIKINLEKLALVESR*SVYWPS Trigger: AGATGGCCAGTAAACAGACAACCTGCTCTCAACTAG...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCCCCGCCCTTGCGGGTCACTGCGTaGCGCCTCGCTCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FVPVLGVEHRTPCVQSPPLRVTA*RLARRP Trigger: CGGCCGCCGAGCGAGGCGGCACGCAGTGACCCGCAA...GGGCGGGGATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCGGGCTCAGCCGGGGCTaGGCGGCTCGTCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTHQLPRPELWLEPHGTVGLSRG*AARLLG Trigger: GCCAAGGAGACGAGCCGCGCAGCCCCGGCTGAGCCC...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTTGCGGGTCACTGCGTaGCGCCTCGCTCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWLRVTA*RLARRP Trigger: CGGCCGCCGAGCGAGGCGGCACGCAGTGACCCGCAA...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTACTAGTTGCGGGTCACTaGGTGCCGCCTCGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HINCPGLNSGWNLTARSVLVAGH*VPPRSA Trigger: CGCCGAGCGAGGCGGCACGCAGTGACCCGCAACTAG...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | CTCGGGATGGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGCTAGTTGCGGGTCACTaGGTGCCGCCTCGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGMGERQGRGQLDASGNRLVAGH*VPPRSA Trigger: CGCCGAGCGAGGCGGCACGCAGTGACCCGCAACTAG...CCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCATCCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGCGGGTCCGGGAGGTCTaGACAGCTCGGTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKRVREV*TARWWA Trigger: TGCCCACCACCGAGCTGTGCAGACCTCCCGGACCCG...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGGTCTCCAGGCAGCTCTaGAGGAGCCGAGGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWVSRQL*RSRGGR Trigger: GCGCCCGCCTCGGCTCCTGCAGAGCTGCCTGGAGAC...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAGGCTCAGCTGCACCATaGGGCCGTCTCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HINCPGLNSGWNLTARSVGSAAP*GRLQAA Trigger: AGCTGCCTGGAGACGGCCGCATGGTGCAGCTGAGCC...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGTTGCGGGTCACTGCGTaGCGCCTCGCTCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQLRVTA*RLARRP Trigger: CGGCCGCCGAGCGAGGCGGCACGCAGTGACCCGCAA...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGTCTCCAGGCAGCTCTaGAGGAGCCGAGGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLTLHSSWQAGWINMDLVSRQL*RSRGGR Trigger: GCGCCCGCCTCGGCTCCTGCAGAGCTGCCTGGAGAC...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGATGGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGCCAGGCTTGGCACGCTaGGTGCCTTCCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGMGERQGRGQLDASGNRPGLAR*VPSSSW Trigger: CCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGG...CCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCATCCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATGCACTGTAACTGTCCGGGCTaGCTGCCCCATCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASWGSLWAAQPQHQHAMHCNCPG*LPHPES Trigger: GCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACA...GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTTTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCGCGGGCGGGCTCAGCTaGACCATGCGGCCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFFCACAGCRTQNPVCAIAGGLS*TMRPSP Trigger: TGGAGACGGCCGCATGGTGCAGCTGAGCCCGCCCGC...GATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAAAGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATGCGGGCGGGCTCAGCTaGACCATGCGGCCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRNRISLCLPKSILRLHAGGLS*TMRPSP Trigger: TGGAGACGGCCGCATGGTGCAGCTGAGCCCGCCCGC...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTCCTGTCCCTCTAGTTaGGGGTCACTGCGTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWSCPSS*GSLRAA Trigger: GGCGGCACGCAGTGACCCGCAACTAGAGGGACAGGA...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGCCCCATCCAGAGAGCTaGCACAGCTGGAGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWPHPES*HSWSWG Trigger: CCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGG...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGGTTCCCGGCTGTTGGTaGAGATGCGCCGCACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKVPGCW*RCAALL Trigger: AAGTAGTGCGGCGCATCTTCACCAACAGCCGGGAAC...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCAACTTGGCCAGGAAATTaGTGTACTTCATGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLPSGFLGKPMGCTAPATWPGN*CTSWQG Trigger: GCCTTGCCATGAAGTACATCAATTTCCTGGCCAAGT...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTAGGGCTCAGCCGGGGCTaGGCGGCTCGTCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLGLSRG*AARLLG Trigger: GCCAAGGAGACGAGCCGCGCAGCCCCGGCTGAGCCC...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTACCTAAGTATTTGAACAGAAGCTGCCACAAAAGCCACCCAGCCAGCTCGGGCTCAGCTGCACCATaGGGCCGTCTCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVPKYLNRSCHKSHPASSGSAAP*GRLQAA Trigger: AGCTGCCTGGAGACGGCCGCATGGTGCAGCTGAGCC...CGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGCCCCATCCAGAGAGCTaGCACAGCTGGAGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLTLHSSWQAGWINMDLPHPES*HSWSWG Trigger: CCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGG...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCACTGTCCGGGCTGGCTaGCCCATCCAGAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFFCACAGCRTQNPVCAITVRAG*PIQRAA Trigger: GGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGT...GATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAAAGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATACTGTCCGGGCTGGCTaGCCCATCCAGAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRNRISLCLPKSILRLHTVRAG*PIQRAA Trigger: GGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGT...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCAGGTCCTTGCCAGGCTTaGCACGCTGGGTGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AEANWMPQVTGDNPRSCPGPCQA*HAGCLP Trigger: AGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACC...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTGTAACTGTCCGGGCTaGCTGCCCCATCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWCNCPG*LPHPES Trigger: GCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACA...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTGGGCTCAGCCGGGGCTaGGCGGCTCGTCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EREKTVPSSEKVPTTSLCGLSRG*AARLLG Trigger: GCCAAGGAGACGAGCCGCGCAGCCCCGGCTGAGCCC...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTCGGGTCCGGGAGGTCTaGACAGCTCGGTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNRISLCLPKSILRLHHGRVREV*TARWWA Trigger: TGCCCACCACCGAGCTGTGCAGACCTCCCGGACCCG...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACGCTTGGCACGCTGGGTaGCTTCCTCCTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFSNQALKKAPQSLTLHAWHAG*LPPPGH Trigger: ATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGC...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGGGTCCTTGCCAGGCTTaGCACGCTGGGTGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQGPCQA*HAGCLP Trigger: AGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACC...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTCCTTGGCGACGCCGTTaGGCAGGACTAGGTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IWTSRPSANRHLAMGSFLPWRRR*AGLGAG Trigger: CCCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGG...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTGTCTCCAGGCAGCTCTaGAGGAGCCGAGGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDIFSLAQRQTLERVRTVSRQL*RSRGGR Trigger: GCGCCCGCCTCGGCTCCTGCAGAGCTGCCTGGAGAC...AGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTGCGGGCGGGCTCAGCTaGACCATGCGGCCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EREKTVPSSEKVPTTSLCAGGLS*TMRPSP Trigger: TGGAGACGGCCGCATGGTGCAGCTGAGCCCGCCCGC...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTGTCTGCACAGCTCGGTaGTGGGCACCCGAAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWAWEREKTVPSSEKVPTVCTAR*WAPEGE Trigger: CTCGCCTTCGGGTGCCCACCACCGAGCTGTGCAGAC...AGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGACGCAAAGTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGTGCCACAGCTGGAGTTaGGGGAAAGCACGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLTQSAGLAHRHGVLCTQCHSWS*GKARPV Trigger: TACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCA...CTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCACTTTGCGTCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| CDS-3UTR CCA 90 bp | TGGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACGAGAGCTGCCACAGCTaGAGTTGGGGGAAAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: WEKGKAEANWMPQVTGDNESCHS*SWGKAR Trigger: ACGTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTC...GTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTACCTAAGTATTTGAACAGAAGCTGCCACAAAAGCCACCCAGCCAGCTCGCCCGGTTGTTGTTGGTaGACATGGGGAAGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVPKYLNRSCHKSHPASSPGCCW*TWGRHP Trigger: CGGATGCCTTCCCCATGTTCACCAACAACAACCGGG...CGAGCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGATGGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGCCTCCTCCTGGTCATTaGGTAACTTGGCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGMGERQGRGQLDASGNRPPPGH*VTWPGN Trigger: ATTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGG...CCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCATCCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | CTTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTTCCTGTCCCTCTAGTTaGGGGTCACTGCGTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWAWEREKTVPSSEKVPTSCPSS*GSLRAA Trigger: GGCGGCACGCAGTGACCCGCAACTAGAGGGACAGGA...AGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCACGGGTCCGGGAGGTCTaGACAGCTCGGTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLGLPKVQTVREVHISPRVREV*TARWWA Trigger: TGCCCACCACCGAGCTGTGCAGACCTCCCGGACCCG...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTTCTTGTCTGGTGGGTaGGTGGGGATCAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFCACTQPNKACSRLLTWFLSGG*VGISFL Trigger: CAGAAAGCTGATCCCCACCCACCCACCAGACAAGAA...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCATGCCACAGCTGGAGTTaGGGGAAAGCACGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AEANWMPQVTGDNPRSCPCHSWS*GKARPV Trigger: TACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCA...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | GGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCGAGAGCTGCCACAGCTaGAGTTGGGGGAAAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGTGSVSVCLSLYSGSIESCHS*SWGKAR Trigger: ACGTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTC...GATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| 3UTR CAA 72 bp | CCAGCACCAACATGCAATGCACCAGCACTCTATCCTTaGCTCTCCTGCACAAACAGGGATGCGCTGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPTCNAPALYP*LSCTNRDALEL Trigger: CAACTCCAGCGCATCCCTGTTTGTGCAGGAGAGCAAAGGATAGAGTGCTGGTGCATTGCATGTTGGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCTGGAGAGAGTGAGAACTGGCTCAGCTGCACCATaGGGCCGTCTCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLDIFSLAQRQTLERVRTGSAAP*GRLQAA Trigger: AGCTGCCTGGAGACGGCCGCATGGTGCAGCTGAGCC...AGTTCTCACTCTCTCCAGGGTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | CACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTTCTGAGCTCAGCAAATaGCCCATTCACATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSWQAGWINMDLGEDGASELSK*PIHILL Trigger: CAGCAGAATGTGAATGGGGCATTTGCTGAGCTCAGA...AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGTTCTTGTCTGGTGGGTaGGTGGGGATCAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLTLHSSWQAGWINMDLFLSGG*VGISFL Trigger: CAGAAAGCTGATCCCCACCCACCCACCAGACAAGAA...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACGTGCCTTCCTCCTCCTaGTCATTGAGTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AIFSNQALKKAPQSLTLHVPSSS*SLSNLA Trigger: GGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCAC...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CCA 90 bp | ACACTGACGCAAAGTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGAGTGTGCTTGGGTGTTaGCTCCTCTGTGTAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLTQSAGLAHRHGVLCTQSVLGC*LLCVTV Trigger: GACAGTTACACAGAGGAGCCAACACCCAAGCACACT...CTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCACTTTGCGTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| 3UTR CAA 72 bp | CCATTTGGACATCCAGACCATCAGCCAACAGACATCTaGCAATGGGAAGCTTCCTTCGGGCTTCCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFGHPDHQPTDI*QWEASFGLPGE Trigger: TTCCCCAGGAAGCCCGAAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGCCTTGGCGACGCCGTTaGGCAGGACTAGGTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFVQILFLECCNFFKGKPWRRR*AGLGAG Trigger: CCCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGG...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| CDS-3UTR TCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACCTTGGCGACGCCGTTaGGCAGGACTAGGTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYNDRYTGLLRTLFHELEPWRRR*AGLGAG Trigger: CCCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGG...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR GCA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACCCCAAAGAACCCACTaGCTAGTGAGGCGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLPQRTH*LVRRAA Trigger: AGCCGCTCGCCTCACTAGGCAGTGGGTTCTTTGGGG...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTGCCCCATTCACATTCTaGTGCCGCCATCGTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IWTSRPSANRHLAMGSFLAPFTF*CRHRSR Trigger: CCGGGAACGATGGCGGCAGCAGAATGTGAATGGGGC...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGACTGAGGCAAGCCGGAGGATCTCATTCTTaGTTAGTTTCTTGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLPTDMACYVHRLRQAGGSHS*LVSCLV Trigger: CACCAGACAAGAAACTAAGCAAGAATGAGATCCTCC...GGCTTGCCTCAGTCTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| CDS-3UTR GCA 90 bp | CACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCAGTAGGAGGATCTCATTCTTaGTTAGTTTCTTGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HINCPGLNSGWNLTARSVGGSHS*LVSCLV Trigger: CACCAGACAAGAAACTAAGCAAGAATGAGATCCTCC...TACTGACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR GCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACACTGTCCGGGCTGGCTaGCCCATCCAGAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLHDGAFGYFLSSSKANTVRAG*PIQRAA Trigger: GGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGT...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCATGCACAGCTCGGTGGTaGGCACCCGAAGGCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLGLPKVQTVREVHISPCTARW*APEGEL Trigger: AAGCTCGCCTTCGGGTGCCCACCACCGAGCTGTGCA...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGGTGCCTTCCTCCTCCTaGTCATTGAGTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQVPSSS*SLSNLA Trigger: GGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCAC...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCAGGCTTGGCACGCTaGGTGCCTTCCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLHDGAFGYFLSSSKANPGLAR*VPSSSW Trigger: CCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGG...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCAAGTGTGCTTGGGTGTTaGCTCCTCTGTGTAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AEANWMPQVTGDNPRSCPSVLGC*LLCVTV Trigger: GACAGTTACACAGAGGAGCCAACACCCAAGCACACT...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGGACATCCAGACCATCAGCCAACAGACATCTTGCAATGGGAAGCTTCCTTGTTCCCGGCTGTTGGTaGAGATGCGCCGCACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: IWTSRPSANRHLAMGSFLVPGCW*RCAALL Trigger: AAGTAGTGCGGCGCATCTTCACCAACAGCCGGGAAC...AAGGAAGCTTCCCATTGCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCCTCCTCCTGGTCATTaGGTAACTTGGCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSRNRISLCLPKSILRLHPPPGH*VTWPGN Trigger: ATTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGG...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCACCCCAAAGAACCCACTaGCTAGTGAGGCGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLGLPKVQTVREVHISPPQRTH*LVRRAA Trigger: AGCCGCTCGCCTCACTAGGCAGTGGGTTCTTTGGGG...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | AGACCAACACAGTTCATTACATACAGTACGACACTGACGCAAAGTGCTGGGCTTCCATTCACATTCTGCTaGCGCCATCGTTCCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTQFITYSTTLTQSAGLPFTFC*RHRSRL Trigger: CAGCCGGGAACGATGGCGGCAGCAGAATGTGAATGG...AAGCCCAGCACTTTGCGTCAGTGTCGTACTGTATGTAATGAACTGTGTTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTTGACTCTCCACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGTCTGAGCTCAGCAAATaGCCCATTCACATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLTLHSSWQAGWINMDLSELSK*PIHILL Trigger: CAGCAGAATGTGAATGGGGCATTTGCTGAGCTCAGA...CAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTGGAGAGTCAAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCAGCTTGGCACGCTGGGTaGCTTCCTCCTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQLGLPKVQTVREVHISPAWHAG*LPPPGH Trigger: ATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGC...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACCCCCATCCAGAGAGCTaGCACAGCTGGAGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLHDGAFGYFLSSSKANPHPES*HSWSWG Trigger: CCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGG...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACTGCACAGCTCGGTGGTaGGCACCCGAAGGCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLHDGAFGYFLSSSKANCTARW*APEGEL Trigger: AAGCTCGCCTTCGGGTGCCCACCACCGAGCTGTGCA...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACGTCTGCACAGCTCGGTaGTGGGCACCCGAAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYVCTAR*WAPEGE Trigger: CTCGCCTTCGGGTGCCCACCACCGAGCTGTGCAGAC...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR CCA 90 bp | AGATATGGGGTATGGAGTATGAGAACAGAATTCAGGGTCTTCCTTAGATCTTACCCAGGCTTGGCACGCTaGGTGCCTTCCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYGVWSMRTEFRVFLRSYPGLAR*VPSSSW Trigger: CCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGG...GTAAGATCTAAGGAAGACCCTGAATTCTGTTCTCATACTCCATACCCCATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR CCA 90 bp | CATACGTTACATGATGGGGCCTTTGGATATTTTCTCTCTAGCTCAAAGGCAAACGGTCCTTGCCAGGCTTaGCACGCTGGGTGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLHDGAFGYFLSSSKANGPCQA*HAGCLP Trigger: AGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACC...GTTTGCCTTTGAGCTAGAGAGAAAATATCCAAAGGCCCCATCATGTAACGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATTGCACAGCTCGGTGGTaGGCACCCGAAGGCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDRYTGLLRTLFHELELHCTARW*APEGEL Trigger: AAGCTCGCCTTCGGGTGCCCACCACCGAGCTGTGCA...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CAA 72 bp | GCTCAAGAAATGGTCAGCTCTTGGGTACCTAAGTATTaGAACAGAAGCTGCCACAAAAGCCACCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQEMVSSWVPKY*NRSCHKSHPAS Trigger: GCTGGCTGGGTGGCTTTTGTGGCAGCTTCTGTTCAAATACTTAGGTACCCAAGAGCTGACCATTTCTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATCCCCAAAGAACCCACTaGCTAGTGAGGCGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDRYTGLLRTLFHELELHPQRTH*LVRRAA Trigger: AGCCGCTCGCCTCACTAGGCAGTGGGTTCTTTGGGG...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATGCTTGGCACGCTGGGTaGCTTCCTCCTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NDRYTGLLRTLFHELELHAWHAG*LPPPGH Trigger: ATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGC...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTATTCTTGTCTGGTGGGTaGGTGGGGATCAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLFLSGG*VGISFL Trigger: CAGAAAGCTGATCCCCACCCACCCACCAGACAAGAA...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAATGTAACTGTCCGGGCTaGCTGCCCCATCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QYNDRYTGLLRTLFHELECNCPG*LPHPES Trigger: GCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACA...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTTCTTTAAGGGCAAGCCCGGTTGTTGTTGGTaGACATGGGGAAGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFVQILFLECCNFFKGKPGCCW*TWGRHP Trigger: CGGATGCCTTCCCCATGTTCACCAACAACAACCGGG...CTTGCCCTTAAAGAAATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR TCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAAGTTCCCGGCTGTTGGTaGAGATGCGCCGCACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QYNDRYTGLLRTLFHELEVPGCW*RCAALL Trigger: AAGTAGTGCGGCGCATCTTCACCAACAGCCGGGAAC...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTTGGGGATCAGCTTTCTaGGCTCAGCAAATGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EREKTVPSSEKVPTTSLCWGSAF*AQQMPH Trigger: ATGGGGCATTTGCTGAGCTCAGAAAGCTGATCCCCA...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTGCCCCATTCACATTCTaGTGCCGCCATCGTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCAPFTF*CRHRSR Trigger: CCGGGAACGATGGCGGCAGCAGAATGTGAATGGGGC...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTCCATTCACATTCTGCTaGCGCCATCGTTCCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCPFTFC*RHRSRL Trigger: CAGCCGGGAACGATGGCGGCAGCAGAATGTGAATGG...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATTGCCACAGCTGGAGTTaGGGGAAAGCACGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NDRYTGLLRTLFHELELHCHSWS*GKARPV Trigger: TACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCA...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTGAGAGCTGCCACAGCTaGAGTTGGGGGAAAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCESCHS*SWGKAR Trigger: ACGTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTC...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTAGTGTGCTTGGGTGTTaGCTCCTCTGTGTAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EREKTVPSSEKVPTTSLCSVLGC*LLCVTV Trigger: GACAGTTACACAGAGGAGCCAACACCCAAGCACACT...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CAA 72 bp | CAGGCAGAATCCCAAATAGAGTATGTACAGGACAGTTaGTCCTCCATTTGGACATCCAGACCATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAESQIEYVQDS*SSIWTSRPSAN Trigger: GTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAACTGTCCTGTACATACTCTATTTGGGATTCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR TCA 90 bp | AATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTTCATTGGGGATCAGCTTTCTaGGCTCAGCAAATGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NDRYTGLLRTLFHELELHWGSAF*AQQMPH Trigger: ATGGGGCATTTGCTGAGCTCAGAAAGCTGATCCCCA...ATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCAGCCCCATTCACATTCTaGTGCCGCCATCGTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLPWNRGEIKINLEKLAAPFTF*CRHRSR Trigger: CCGGGAACGATGGCGGCAGCAGAATGTGAATGGGGC...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| 3UTR CAA 72 bp | CCAAATAGAGTATGTACAGGACAGTTTGTCCTCCATTaGGACATCCAGACCATCAGCCAACAGACATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRVCTGQFVLH*DIQTISQQTSC Trigger: GCAAGATGTCTGTTGGCTGATGGTCTGGATGTCCAAATGGAGGACAAACTGTCCTGTACATACTCTATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CAA 72 bp | TTTTGTTTTTCAATAAAGAGTCACACGCCCGCAGTGTaGGCCTATAGGCTGTACAAATATCAAGGTACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCFSIKSHTPAV*AYRLYKYQGTR Trigger: CCGGGTACCTTGATATTTGTACAGCCTATAGGCCAACACTGCGGGCGTGTGACTCTTTATTGAAAAACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
||
| CDS-3UTR TCA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAAACTTGGCCAGGAAATTaGTGTACTTCATGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QYNDRYTGLLRTLFHELETWPGN*CTSWQG Trigger: GCCTTGCCATGAAGTACATCAATTTCCTGGCCAAGT...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTACTTCACTCTGTGGAGGATCTCATTCTTaGTTAGTTTCTTGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EREKTVPSSEKVPTTSLCGGSHS*LVSCLV Trigger: CACCAGACAAGAAACTAAGCAAGAATGAGATCCTCC...ACAGAGTGAAGTAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| 3UTR CAA 72 bp | GATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTaGAACTTCATTATAGGCAGGCCTAGCTTTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DTQDFCALCFMS*NFIIGRPSFRI Trigger: TATCCTAAAGCTAGGCCTGCCTATAATGAAGTTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTTCTGAGCTCAGCAAATaGCCCATTCACATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCSELSK*PIHILL Trigger: CAGCAGAATGTGAATGGGGCATTTGCTGAGCTCAGA...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCAGTGCCTTCCTCCTCCTaGTCATTGAGTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLPWNRGEIKINLEKLAVPSSS*SLSNLA Trigger: GGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCAC...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGCCTTGGAATCGGGGAGAAATTAAGATTAATCTTGAGAAATTAGCAACTTGGCCAGGAAATTaGTGTACTTCATGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLPWNRGEIKINLEKLATWPGN*CTSWQG Trigger: GCCTTGCCATGAAGTACATCAATTTCCTGGCCAAGT...TGCTAATTTCTCAAGATTAATCTTAATTTCTCCCCGATTCCAAGGCAAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
||
| CDS CCA 90 bp | CCCCCACCAGCTCCCACCACGGGGTCCTTGCCAGGCTTGGCACGCTaGGTGCCTTCCTCCTCCTGGTCATTGAGTAACTTGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPPAPTTGSLPGLAR*VPSSSWSLSNLARK Trigger: TTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCCCGTGGTGGGAGCTGGTGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATGCACTCCTTGGCGACGCCGTaGAGCAGGACTAGGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASWGSLWAAQPQHQHAMHSLATP*SRTRCG Trigger: CCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGGA...GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS GCA 90 bp | AGTGTGCTTGGGTGTTGGCTCCTCTGTGTAACTGTCCGGGCTGGCTaGCCCATCCAGAGAGCTGCCACAGCTGGAGTTGGGGGAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLGCWLLCVTVRAG*PIQRAATAGVGGKH Trigger: GTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACACAGAGGAGCCAACACCCAAGCACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS CCA 90 bp | GGGAAGTGTGCTTGGGTGTTGGCTCCTCTGTGTAACTGTCCGGGCTaGCTGCCCCATCCAGAGAGCTGCCACAGCTGGAGTTGGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKCAWVLAPLCNCPG*LPHPESCHSWSWGK Trigger: TTTCCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACACAGAGGAGCCAACACCCAAGCACACTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGGGGTCCTTGCCAGGCTaGGCACGCTGGGTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFCACTQPNKACSRLLTWGSLPG*ARWVPS Trigger: GGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCC...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATGCACCTGCCACAGCTGGAGTaGGGGGAAAGCACGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASWGSLWAAQPQHQHAMHLPQLE*GESTSC Trigger: ACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCAG...GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS GCA 90 bp | GCTCCTCTGTGTAACTGTCCGGGCTGGCTGCCCCATCCAGAGAGCTaGCACAGCTGGAGTTGGGGGAAAGCACGTCCTGTAGAAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: APLCNCPGWLPHPES*HSWSWGKARPVEGL Trigger: AAGACCTTCTACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGGCAGCCAGCCCGGACAGTTACACAGAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | AGCTTCTTTTGTGCCTGTGCTGGGTGTAGAACACAGAACCCCGTGTGTGCAATCGCGCGGCTCGTCTCCTaGGCGACGCCGTTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFFCACAGCRTQNPVCAIARLVS*ATPLSR Trigger: CCTGCTCAACGGCGTCGCCAAGGAGACGAGCCGCGC...GATTGCACACACGGGGTTCTGTGTTCTACACCCAGCACAGGCACAAAAGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATGCGCGGCTCGTCTCCTaGGCGACGCCGTTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSRNRISLCLPKSILRLHARLVS*ATPLSR Trigger: CCTGCTCAACGGCGTCGCCAAGGAGACGAGCCGCGC...ATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCTGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGCTTCCTTCGGGCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACTCTTCACCCGGTTGTaGTTGGTGAACATGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKLPSGFLGKPMGCTAPALFTRL*LVNMGK Trigger: CTTCCCCATGTTCACCAACAACAACCGGGTGAAGAG...TGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGCCCGAAGGAAGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCATCCTTGGCGACGCCGTaGAGCAGGACTAGGTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: AEANWMPQVTGDNPRSCPSLATP*SRTRCG Trigger: CCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGGA...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCTGGGGAAGCCTATGGGCTGCACAGCCCCAGCACCAACATGCAATGCACTTCTTGCTTAGTTTCTaGTCTGGTGGGTGGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: ASWGSLWAAQPQHQHAMHFLLSF*SGGWVG Trigger: CCCCACCCACCCACCAGACAAGAAACTAAGCAAGAA...GTGCATTGCATGTTGGTGCTGGGGCTGTGCAGCCCATAGGCTTCCCCAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | CACAGCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCTCCTCTTCACCCGGTaGTTGTTGGTGAACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: HSSWQAGWINMDLGEDGALLFTR*LLVNMG Trigger: CCCCATGTTCACCAACAACAACCGGGTGAAGAGGAG...AGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACCCCAGATCTTGTCCACTGCCACAGCTGGAGTaGGGGGAAAGCACGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AEANWMPQVTGDNPRSCPLPQLE*GESTSC Trigger: ACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCAG...TGGACAAGATCTGGGGTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 90 bp | ACGGGGTCCTTGCCAGGCTTGGCACGCTGGGTGCCTTCCTCCTCCTaGTCATTGAGTAACTTGGCCAGGAAATTGATGTACTTCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: TGSLPGLARWVPSSS*SLSNLARKLMYFMA Trigger: TGCCATGAAGTACATCAATTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGCAAGCTGGATGGATCAACATGGACCTGGGTGAAGATGGGGCTCAAGCTCTTCACCCGGTTGTaGTTGGTGAACATGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AAGKLDGSTWTWVKMGLKLFTRL*LVNMGK Trigger: CTTCCCCATGTTCACCAACAACAACCGGGTGAAGAG...CTTGAGCCCCATCTTCACCCAGGTCCATGTTGATCCATCCAGCTTGCCAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | CAAACACATCAACTGCCCAGGCCTGAACTCTGGCTGGAACCTCACGGCACGGTCTCCTCCTCCTGGTCATaGAGTAACTTGGCCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: QTHQLPRPELWLEPHGTVSSSWS*SNLARK Trigger: TTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGA...GACCGTGCCGTGAGGTTCCAGCCAGAGTTCAGGCCTGGGCAGTTGATGTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| CDS-3UTR CAA 90 bp | TTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTAGGGTCCTTGCCAGGCTaGGCACGCTGGGTGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FGLGKGRRPCHLQKKYLLGSLPG*ARWVPS Trigger: GGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCC...TAGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GTGTTGGCCTATAGGCTGTACAAATATCAAGGTACCCGGAGTAGTTACTCCTCTTCCTTGGCGACGCCGTaGAGCAGGACTAGGTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: VLAYRLYKYQGTRSSYSSSLATP*SRTRCG Trigger: CCCGCACCTAGTCCTGCTCAACGGCGTCGCCAAGGA...AGAGGAGTAACTACTCCGGGTACCTTGATATTTGTACAGCCTATAGGCCAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| CDS-3UTR CAA 90 bp | CCTTTCTGTGCCTGCACACAGCCCAACAAAGCATGCTCAAGGCTGCTGACTTGGTTCTTGCTTAGTTTCTaGTCTGGTGGGTGGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PFCACTQPNKACSRLLTWFLLSF*SGGWVG Trigger: CCCCACCCACCCACCAGACAAGAAACTAAGCAAGAA...CCAAGTCAGCAGCCTTGAGCATGCTTTGTTGGGCTGTGTGCAGGCACAGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GCCATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACTTCACCCGGTTGTTGTaGGTGAACATGGGGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: AIFSNQALKKAPQSLTLHFTRLL*VNMGKA Trigger: TGCCTTCCCCATGTTCACCAACAACAACCGGGTGAA...GTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 90 bp | GCAAGGCGGAGGATCTCATTCTTGCTTAGTTTCTTGTCTGGTGGGTaGGTGGGGATCAGCTTTCTGAGCTCAGCAAATGCCCCATTCACA | + |
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Preference number: 5 (lower is better) Translates to: ARRRISFLLSFLSGG*VGISFLSSANAPFT Trigger: TGTGAATGGGGCATTTGCTGAGCTCAGAAAGCTGATCCCCACCCACCCACCAGACAAGAAACTAAGCAAGAATGAGATCCTCCGCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | TGGGAGAAAGGCAAGGCAGAGGCCAATTGGATGCCTCAGGTAACAGGTGACAACTCCTCCTCCTGGTCATaGAGTAACTTGGCCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: WEKGKAEANWMPQVTGDNSSSWS*SNLARK Trigger: TTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGA...GTTGTCACCTGTTACCTGAGGCATCCAATTGGCCTCTGCCTTGCCTTTCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTGGGTCCTTGCCAGGCTaGGCACGCTGGGTGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCGSLPG*ARWVPS Trigger: GGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCC...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | AGGAACAGGATCAGTCTCTGTCTGCCTAAGTCTATACTCAGGCTCCATCATGGTCTCTTCACCCGGTTGTaGTTGGTGAACATGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RNRISLCLPKSILRLHHGLFTRL*LVNMGK Trigger: CTTCCCCATGTTCACCAACAACAACCGGGTGAAGAG...ACCATGATGGAGCCTGAGTATAGACTTAGGCAGACAGAGACTGATCCTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | ACACTGACGCAAAGTGCTGGGCTTGCCCACAGACATGGCGTGCTATGTACACAGTGGTCATTGAGTAACTaGGCCAGGAAATTGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: TLTQSAGLAHRHGVLCTQWSLSN*ARKLMY Trigger: GTACATCAATTTCCTGGCCAAGTTACTCAATGACCA...CTGTGTACATAGCACGCCATGTCTGTGGGCAAGCCCAGCACTTTGCGTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| CDS-3UTR CAA 90 bp | AGACCAACACAGTTCATTACATACAGTACGACACTGACGCAAAGTGCTGGGCTTTTCACCCGGTTGTTGTaGGTGAACATGGGGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RPTQFITYSTTLTQSAGLFTRLL*VNMGKA Trigger: TGCCTTCCCCATGTTCACCAACAACAACCGGGTGAA...AAGCCCAGCACTTTGCGTCAGTGTCGTACTGTATGTAATGAACTGTGTTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030489.9 |
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| CDS-3UTR CAA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCACTCCTCTTCACCCGGTaGTTGTTGGTGAACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: GQLGLPKVQTVREVHISPLLFTR*LLVNMG Trigger: CCCCATGTTCACCAACAACAACCGGGTGAAGAGGAG...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGTTGGGACTTCCCAAAGTTCAAACTGTAAGGGAAGTTCACATAAGTCCATTCACCCGGTTGTTGTaGGTGAACATGGGGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GQLGLPKVQTVREVHISPFTRLL*VNMGKA Trigger: TGCCTTCCCCATGTTCACCAACAACAACCGGGTGAA...TGGACTTATGTGAACTTCCCTTACAGTTTGAACTTTGGGAAGTCCCAACTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCCAACCAGGCCCTGAAGAAGGCACCTCAAAGCTTGACTCTCCACAGTGGTCATTGAGTAACTaGGCCAGGAAATTGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: HLFQPGPEEGTSKLDSPQWSLSN*ARKLMY Trigger: GTACATCAATTTCCTGGCCAAGTTACTCAATGACCA...CTGTGGAGAGTCAAGCTTTGAGGTGCCTTCTTCAGGGCCTGGTTGGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | CTCATGCTTACATTTCCCCCTTTGTACAGATATTGTTCTTGGAATGCTGCAATTCTGCCACAGCTGGAGTaGGGGGAAAGCACGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LMLTFPPLYRYCSWNAAILPQLE*GESTSC Trigger: ACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCAG...AATTGCAGCATTCCAAGAACAATATCTGTACAAAGGGGGAAATGTAAGCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 |
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| CDS-3UTR CAA 90 bp | CAATACAATGACAGATACACAGGACTTCTGCGCACTTTGTTTCATGAGCTTGAACTCCTCTTCACCCGGTaGTTGTTGGTGAACATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QYNDRYTGLLRTLFHELELLFTR*LLVNMG Trigger: CCCCATGTTCACCAACAACAACCGGGTGAAGAGGAG...TTCAAGCTCATGAAACAAAGTGCGCAGAAGTCCTGTGTATCTGTCATTGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | CTTTGGGCTTGGGAAAGGGAGAAGACCGTGCCATCTTCAGAAAAAGTACCTACTTGGTCATTGAGTAACTaGGCCAGGAAATTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LWAWEREKTVPSSEKVPTWSLSN*ARKLMY Trigger: GTACATCAATTTCCTGGCCAAGTTACTCAATGACCA...AGTAGGTACTTTTTCTGAAGATGGCACGGTCTTCTCCCTTTCCCAAGCCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTTTCTTGCTTAGTTTCTaGTCTGGTGGGTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCFLLSF*SGGWVG Trigger: CCCCACCCACCCACCAGACAAGAAACTAAGCAAGAA...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGTCTTTAAAAGATGGAGGAGAAGGGTCTGCTTTACAAAACTTTCATGTTCCTCCTCCTGGTCATaGAGTAACTTGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCVFKRWRRRVCFTKLSCSSSWS*SNLARK Trigger: TTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGA...ACATGAAAGTTTTGTAAAGCAGACCCTTCTCCTCCATCTTTTAAAGACACAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS GCA 72 bp | CAGGGGCTGCCAGCGCGGGCGGGCTCAGCTGCACCATaGGGCCGTCTCCAGGCAGCTCTGCAGGAGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: QGLPARAGSAAP*GRLQAALQEPR Trigger: CCTCGGCTCCTGCAGAGCTGCCTGGAGACGGCCGCATGGTGCAGCTGAGCCCGCCCGCGCTGGCAGCCCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030489.9 ENSMUST00000136946.8 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 72 bp | GGCAGGATGGAGGCTGCGGGAAGTGTGCTTGGGTGTTaGCTCCTCTGTGTAACTGTCCGGGCTGGCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRMEAAGSVLGC*LLCVTVRAGCP Trigger: GGGGCAGCCAGCCCGGACAGTTACACAGAGGAGCCAACACCCAAGCACACTTCCCGCAGCCTCCATCCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 72 bp | GCTCCCACCACGGGGTCCTTGCCAGGCTTGGCACGCTaGGTGCCTTCCTCCTCCTGGTCATTGAGTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: APTTGSLPGLAR*VPSSSWSLSNL Trigger: CAAGTTACTCAATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGGCAAGGACCCCGTGGTGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 72 bp | CCGGGCTGGCTGCCCCATCCAGAGAGCTGCCACAGCTaGAGTTGGGGGAAAGCACGTCCTGTAGAAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGWLPHPESCHS*SWGKARPVEGL Trigger: AAGACCTTCTACAGGACGTGCTTTCCCCCAACTCCAGCTGTGGCAGCTCTCTGGATGGGGCAGCCAGCCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 72 bp | TTGCCAGGCTTGGCACGCTGGGTGCCTTCCTCCTCCTaGTCATTGAGTAACTTGGCCAGGAAATTGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LPGLARWVPSSS*SLSNLARKLMY Trigger: GTACATCAATTTCCTGGCCAAGTTACTCAATGACCAGGAGGAGGAAGGCACCCAGCGTGCCAAGCCTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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| CDS CCA 72 bp | AGGATCTCATTCTTGCTTAGTTTCTTGTCTGGTGGGTaGGTGGGGATCAGCTTTCTGAGCTCAGCAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RISFLLSFLSGG*VGISFLSSANA Trigger: GGCATTTGCTGAGCTCAGAAAGCTGATCCCCACCCACCCACCAGACAAGAAACTAAGCAAGAATGAGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030489.9 ENSMUST00000161601.8 ENSMUST00000162489.2 |
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