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Pregenerated sensors for TAGLN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026547

Ensembl transcript IDs: ENSMUST00000111230.8

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTATCAGGCCCTGCCAGTGGTGACAAGATAGGCTGGCCTGGACCCTaGCAGAGGGGAGTTCAGCAATCCAGGGGCTCTCAGGGAATGTCT +
Preference number: 1 (lower is better)
Translates to: LSGPASGDKIGWPGP*QRGVQQSRGSQGMS
Trigger: AGACATTCCCTGAGAGCCCCTGGATTGCTGAACTCCCCTCTGCCAGGGTCCAGGCCAGCCTATCTTGTCACCACTGGCAGGGCCTGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR-3UTR GCA 90 bp GCCCAGACGTGTGGTAAGTACAGCCCAGCTGTGGCTGGAGTGACAGCCACAGGCAGAAGGAAGGGTCGGTaGAGCATCAGGCCATGGGGC +
Preference number: 2 (lower is better)
Translates to: AQTCGKYSPAVAGVTATGRRKGR*SIRPWG
Trigger: GCCCCATGGCCTGATGCTGCACCGACCCTTCCTTCT...GCCTGTGGCTGTCACTCCAGCCACAGCTGGGCTGTACTTACCACACGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR-3UTR CCA 90 bp GATCAGGAAAGCAGGAAAGATGCTGTGGGGAGGCAACTTTGGTCCCAGGGTTTTCAAGATAGGCTGGCCTaGACCCTGGCAGAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: DQESRKDAVGRQLWSQGFQDRLA*TLAEGS
Trigger: ACTCCCCTCTGCCAGGGTCCAGGCCAGCCTATCTTG...AAAACCCTGGGACCAAAGTTGCCTCCCCACAGCATCTTTCCTGCTTTCCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR-3UTR GCA 90 bp GATCAGGAAAGCAGGAAAGATGCTGTGGGGAGGCAACTTTGGTCCCAGGGTTTTTTGTGGGGGAAGGAATaGATTAGTAAGCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: DQESRKDAVGRQLWSQGFLWGKE*ISKPRE
Trigger: CTCTCTGGGCTTACTAATGCATTCCTTCCCCCACAA...AAAACCCTGGGACCAAAGTTGCCTCCCCACAGCATCTTTCCTGCTTTCCTGATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR-3UTR CCA 90 bp GAATGGAAAGAAAGAAGCCAAAGAGCCTCTGCTAGGGAAAGCTGCCCAGACGTGTCCCAGGGTTTTTGTTaGTCCAGTTTTGATGGTTGT +
Preference number: 2 (lower is better)
Translates to: EWKERSQRASARESCPDVSQGFC*SSFDGC
Trigger: ACAACCATCAAAACTGGACCAACAAAAACCCTGGGA...CACGTCTGGGCAGCTTTCCCTAGCAGAGGCTCTTTGGCTTCTTTCTTTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR TCA 72 bp AGAGAGAGAGAGGCAATTATCAGGCCCTGCCAGTGGTaGCAAGATAGGCTGGCCTGGACCCTGGCAGAGGGG +
Preference number: 3 (lower is better)
Translates to: REREAIIRPCQW*QDRLAWTLAEG
Trigger: CCCCTCTGCCAGGGTCCAGGCCAGCCTATCTTGTCACCACTGGCAGGGCCTGATAATTGCCTCTCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR CCA 72 bp CAATTATCAGGCCCTGCCAGTGGTGACAAGATAGGCTaGCCTGGACCCTGGCAGAGGGGAGTTCAGCAATCC +
Preference number: 3 (lower is better)
Translates to: QLSGPASGDKIG*PGPWQRGVQQS
Trigger: GGATTGCTGAACTCCCCTCTGCCAGGGTCCAGGCCAGCCTATCTTGTCACCACTGGCAGGGCCTGATAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
3UTR TCA 72 bp GGGTCGGTGCAGCATCAGGCCATGGGGCAGAATCTCTaGCTCCTAGCCAAGGGATGGACTAAAAGAAGAGAT +
Preference number: 3 (lower is better)
Translates to: GSVQHQAMGQNL*LLAKGWTKRRD
Trigger: ATCTCTTCTTTTAGTCCATCCCTTGGCTAGGAGTCAGAGATTCTGCCCCATGGCCTGATGCTGCACCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
CDS-3UTR GCA 90 bp AGTGGTGACAAGATAGGCTGGCCTGGACCCTGGCAGAGGGGAGTTCAGCAATCCCATGCCGGCCTGAGATaGTCCACGGTTGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGDKIGWPGPWQRGVQQSHAGLR*STVGAH
Trigger: ATGGGCACCAACCGTGGAGCATCTCAGGCCGGCATG...GGATTGCTGAACTCCCCTCTGCCAGGGTCCAGGCCAGCCTATCTTGTCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
CDS-3UTR GCA 90 bp GCTGCCCAGACGTGTGGTAAGTACAGCCCAGCTGTGGCTGGAGTGACAGCCACACGGTTGGTGCCCATCTaGAACCCAATCACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AAQTCGKYSPAVAGVTATRLVPI*NPITFL
Trigger: CAAGAACGTGATTGGGTTGCAGATGGGCACCAACCG...TGTGGCTGTCACTCCAGCCACAGCTGGGCTGTACTTACCACACGTCTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
CDS-3UTR CCA 90 bp GAATGGAAAGAAAGAAGCCAAAGAGCCTCTGCTAGGGAAAGCTGCCCAGACGTGGAGATGCTCCACGGTTaGTGCCCATCTGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: EWKERSQRASARESCPDVEMLHG*CPSATQ
Trigger: TTGGGTTGCAGATGGGCACCAACCGTGGAGCATCTC...CACGTCTGGGCAGCTTTCCCTAGCAGAGGCTCTTTGGCTTCTTTCTTTCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8
CDS-3UTR CAA 90 bp ATCAGGAAAGCAGGAAAGATGCTGTGGGGAGGCAACTTTGGTCCCAGGGTTTTTTTCCGAGGGTTCTCCTaGGATTTCTTAGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: IRKAGKMLWGGNFGPRVFFRGFS*DFLGNQ
Trigger: CTGGTTTCCTAAGAAATCCAAGGAGAACCCTCGGAA...AAAAACCCTGGGACCAAAGTTGCCTCCCCACAGCATCTTTCCTGCTTTCCTGAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000111230.8