Pregenerated sensors for TAGLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032085Ensembl transcript IDs: ENSMUST00000034590.4, ENSMUST00000215509.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGGGCCAGAGGAGTCATCCAGAAGCCATCGGCCAGGAACGTGTaGGCCCAACATGCTTCCACCCTCAGGGTTCCTGGAATGCTAACA | + |
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Preference number: 1 (lower is better) Translates to: CGARGVIQKPSARNV*AQHASTLRVPGMLT Trigger: TGTTAGCATTCCAGGAACCCTGAGGGTGGAAGCATGTTGGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTCTGGCCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 90 bp | TATAAAAACCCAAACAAGTCCACCACTCCCAGTATTCTCTCCTTCTaGCAAACCAGAGCTATGCAGATGCAGGTCACTCTTCTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: YKNPNKSTTPSILSF*QTRAMQMQVTLLLH Trigger: ATGGAGAAGAAGAGTGACCTGCATCTGCATAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAGTGGTGGACTTGTTTGGGTTTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGGGGCCAGAGGAGTCATCCAGAAGCCATCGGCCAGGAACGTGTGAGCCCCAGGGGCCAGGGCAGTaGTGGCTCTGGGGTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: PVGPEESSRSHRPGTCEPQGPGQ*WLWGKM Trigger: CATCTTACCCCAGAGCCACCACTGCCCTGGCCCCTG...GGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTCTGGCCCCACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGGCCAGAGGAGTCATCCAGAAGCCATCGGCCAGGAACGTGTGAGCCCAGGGCCAGGGCAGTGGTaGCTCTGGGGTAAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LWGQRSHPEAIGQERVSPGPGQW*LWGKML Trigger: CAGCATCTTACCCCAGAGCCACCACTGCCCTGGCCC...TGGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTCTGGCCCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGGGCCAGAGGAGTCATCCAGAAGCCATCGGCCAGGAACGTGTGAGCCCCTACATAGGCATTTGTaGGGCAGGCTAAGCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: PVGPEESSRSHRPGTCEPLHRHL*GRLSRM Trigger: CATCCTGCTTAGCCTGCCTCACAAATGCCTATGTAG...GGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTCTGGCCCCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCAGGGTTCCTGGAATGCTAACAGGAGTGACAAACCAAACTGCCAGCCAGAGGTGGGGGTACAGCTaGGAACAGGGGCCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TLRVPGMLTGVTNQTASQRWGYS*EQGPGQ Trigger: CTGCCCTGGCCCCTGTTCCCAGCTGTACCCCCACCT...CTGGCTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCAGGAACCCTGAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAACAAGTCCACCACTCCCAGTATTCTCTCCTTCTGCCAAACCAGAGCTATCAAGGACAGTGGGCTaGCCTACAGCCAGGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: TQTSPPLPVFSPSAKPELSRTVG*PTARLP Trigger: GGGTAGCCTGGCTGTAGGCCAGCCCACTGTCCTTGA...TAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAGTGGTGGACTTGTTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR TCA 90 bp | AGATGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGGTCATCTTTGCCCAGTaGCACCTCAGAGCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RCRGWAGSPSKDIRYQGQVIFAQ*HLRAVR Trigger: CCTGACAGCTCTGAGGTGTCACTGGGCAAAGATGAC...CTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAACAAGTCCACCACTCCCAGTATTCTCTCCTTCTGCCAAACCAGAGCTATGGGAGCTGCCCATGTaGAGTCATCTTTGCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TQTSPPLPVFSPSAKPELWELPM*SHLCPV Trigger: CACTGGGCAAAGATGACTGCACATGGGCAGCTCCCA...TAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAGTGGTGGACTTGTTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAACAAGTCCACCACTCCCAGTATTCTCTCCTTCTGCCAAACCAGAGCTACAGCCCACTTCTCCCTaGTTACTCCAGGATGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TQTSPPLPVFSPSAKPELQPTSP*LLQDER Trigger: CCTCTCATCCTGGAGTAAGCAGGGAGAAGTGGGCTG...TAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAGTGGTGGACTTGTTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR-3UTR CCA 90 bp | TGGAATGCTAACAGGAGTGACAAACCAAACTGCCAGCCAGGCCGGAGAAAAGATGAGGCTAAGGATAGGTaGGAGCTGCCCATGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: WNANRSDKPNCQPGRRKDEAKDR*ELPMCS Trigger: ACTGCACATGGGCAGCTCCCACCTATCCTTAGCCTC...ATCTTTTCTCCGGCCTGGCTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 72 bp | CCAGAAGCCATCGGCCAGGAACGTGTGAGCCCAACATaGTTCCACCCTCAGGGTTCCTGGAATGCTAACAGG | + |
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Preference number: 3 (lower is better) Translates to: PEAIGQERVSPT*FHPQGSWNANR Trigger: CCTGTTAGCATTCCAGGAACCCTGAGGGTGGAAGCATGTTGGGCTCACACGTTCCTGGCCGATGGCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR TCA 72 bp | ACTCTTCTTCTCCATAGCCTGCTTCCTCTGAAGCTCTaGGCCTGTGGGGCCAGAGGAGTCATCCAGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TLLLHSLLPLKL*ACGARGVIQKP Trigger: TGGCTTCTGGATGACTCCTCTGGCCCCACAGGCTCAGAGCTTCAGAGGAAGCAGGCTATGGAGAAGAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR TCA 72 bp | AGAGCTGTCAGGGCTAAGAACCTACATAGGCATTTGTaGGGCAGGCTAAGCAGGATGCTGCAGCTCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RAVRAKNLHRHL*GRLSRMLQLRA Trigger: AGCCCTGAGCTGCAGCATCCTGCTTAGCCTGCCTCACAAATGCCTATGTAGGTTCTTAGCCCTGACAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR CCA 72 bp | CGTGTGAGCCCAACATGCTTCCACCCTCAGGGTTCCTaGAATGCTAACAGGAGTGACAAACCAAACTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RVSPTCFHPQGS*NANRSDKPNCQ Trigger: CTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCAGGAACCCTGAGGGTGGAAGCATGTTGGGCTCACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 72 bp | CTCCCAGTATTCTCTCCTTCTGCCAAACCAGAGCTATaGAGATGCAGGTCACTCTTCTTCTCCATAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LPVFSPSAKPEL*RCRSLFFSIAC Trigger: GCAGGCTATGGAGAAGAAGAGTGACCTGCATCTGCATAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 72 bp | GGTTCCTGGAATGCTAACAGGAGTGACAAACCAAACTaGCAGCCAGGCCGGAGAAAAGATGGAGATACATGT | + |
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Preference number: 3 (lower is better) Translates to: GSWNANRSDKPN*QPGRRKDGDTC Trigger: ACATGTATCTCCATCTTTTCTCCGGCCTGGCTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 72 bp | GTATTCTCTCCTTCTGCCAAACCAGAGCTATGCAGATaGAGGTCACTCTTCTTCTCCATAGCCTGCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VFSPSAKPELCR*RSLFFSIACFL Trigger: GAGGAAGCAGGCTATGGAGAAGAAGAGTGACCTGCATCTGCATAGCTCTGGTTTGGCAGAAGGAGAGAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| 3UTR GCA 72 bp | CCAAACAAGTCCACCACTCCCAGTATTCTCTCCTTCTaGCAAACCAGAGCTATGCAGATGCAGGTCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: PNKSTTPSILSF*QTRAMQMQVTL Trigger: AAGAGTGACCTGCATCTGCATAGCTCTGGTTTGGCAGAAGGAGAGAATACTGGGAGTGGTGGACTTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR TCA 90 bp | CCTGTGGGGCCAGAGGAGTCATCCAGAAGCCATCGGCCAGGAACGTGTGAGCCCCCATTTGAAGGCCAATaGCGTGCTTCCCCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PVGPEESSRSHRPGTCEPPFEGQ*RASPPA Trigger: TGCAGGAGGGGAAGCACGTCATTGGCCTTCAAATGG...GGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTCTGGCCCCACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR CCA 90 bp | AGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGGCTCAGGCGCCCACGATCTaGGCGGCCTACATCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGWAGSPSKDIRYQGQWAQAPTI*AAYIRA Trigger: GGCCCTGATGTAGGCCGCCCAGATCGTGGGCGCCTG...AGCCCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR TCA 90 bp | GGCAGTGGTGGCTCTGGGGTAAGATGCTGGGCTGAGGCTAAGGATAGGTGGGAGGCAGTTGGCTGTCTGTaGAGTCCCTCTTATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSGGSGVRCWAEAKDRWEAVGCL*SPSYAP Trigger: AGGAGCATAAGAGGGACTTCACAGACAGCCAACTGC...CTCCCACCTATCCTTAGCCTCAGCCCAGCATCTTACCCCAGAGCCACCACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR CCA 90 bp | GCATTTGTGAGGCAGGCTAAGCAGGATGCTGCAGCTCAGGGCTGGCCTTCCCTTTTCCCCTCCTGCAGTTaGCTGTCTGTGAAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: AFVRQAKQDAAAQGWPSLFPSCS*LSVKSL Trigger: GAGGGACTTCACAGACAGCCAACTGCAGGAGGGGAA...AAGGGAAGGCCAGCCCTGAGCTGCAGCATCCTGCTTAGCCTGCCTCACAAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGGCCCATAGCCTGTCATaGCAGCCTGCGAGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CRGWAGSPSKDIRYQGQWAHSLS*QPARLL Trigger: GAGGAGCCTCGCAGGCTGGCATGACAGGCTATGGGC...CCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | GGCAGTGGTGGCTCTGGGGTAAGATGCTGGGCTGAGGCTAAGGATAGGTGGGAGGCCATTAGAGTCCTCTaGACTGCTGCCATATCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GSGGSGVRCWAEAKDRWEAIRVL*TAAISL Trigger: TAAGGATATGGCAGCAGTGCAGAGGACTCTAATGGC...CTCCCACCTATCCTTAGCCTCAGCCCAGCATCTTACCCCAGAGCCACCACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | GCATTTGTGAGGCAGGCTAAGCAGGATGCTGCAGCTCAGGGCTGGCCTTCCCTTTTCTCAATTTTGGACTaGACTTCTCGGCTCATGCCG | + |
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Preference number: 4 (lower is better) Translates to: AFVRQAKQDAAAQGWPSLFSILD*TSRLMP Trigger: CGGCATGAGCCGAGAAGTGCAGTCCAAAATTGAGAA...AAGGGAAGGCCAGCCCTGAGCTGCAGCATCCTGCTTAGCCTGCCTCACAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | AGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGGCTACATCAGGGCCACACTaGACTACAATCCACTCCACT | + |
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Preference number: 4 (lower is better) Translates to: RGWAGSPSKDIRYQGQWATSGPH*TTIHST Trigger: AGTGGAGTGGATTGTAGTGCAGTGTGGCCCTGATGT...AGCCCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | ACCCTCAGGGTTCCTGGAATGCTAACAGGAGTGACAAACCAAACTGCCAGCCAGGCCACCTGTTCCATCTaGTTAAAGACCATGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: TLRVPGMLTGVTNQTASQATCSI*LKTMEG Trigger: ACCCTCCATGGTCTTTAAGCAGATGGAACAGGTGGC...CTGGCTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCAGGAACCCTGAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR TCA 90 bp | AGGAGTGACAAACCAAACTGCCAGCCAGGCCGGAGAAAAGATGGAGATACATGTCTGTTGCTGCCCATTTaGAGGCCAATGACGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RSDKPNCQPGRRKDGDTCLLLPI*RPMTCF Trigger: GAAGCACGTCATTGGCCTTCAAATGGGCAGCAACAG...ACATGTATCTCCATCTTTTCTCCGGCCTGGCTGGCAGTTTGGTTTGTCACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTGACAAACCAAACTGCCAGCCAGGCCGGAGAAAAGATGGAGATACATGTAAAGACCATGGAGGGTaGGTTCTCAGGCACCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RSDKPNCQPGRRKDGDTCKDHGG*VLRHLH Trigger: GTGAAGGTGCCTGAGAACCCACCCTCCATGGTCTTT...ACATGTATCTCCATCTTTTCTCCGGCCTGGCTGGCAGTTTGGTTTGTCACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | ACCCTCAGGGTTCCTGGAATGCTAACAGGAGTGACAAACCAAACTGCCAGCCAGAGTCCTCTGCACTGCTaGCATATCCTTACCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: TLRVPGMLTGVTNQTASQSPLHC*HILTFI Trigger: TATGAAGGTAAGGATATGGCAGCAGTGCAGAGGACT...CTGGCTGGCAGTTTGGTTTGTCACTCCTGTTAGCATTCCAGGAACCCTGAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGTCCCTCTTATGCTCCTaGGCTTTCTTCATAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: CRGWAGSPSKDIRYQGQWSLLCS*AFFINQ Trigger: CTGGTTTATGAAGAAAGCCCAGGAGCATAAGAGGGA...CCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGGGCTGTTCACCAATTTaGTCAGAATCACACCATTCT | + |
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Preference number: 4 (lower is better) Translates to: CRGWAGSPSKDIRYQGQWGCSPI*SESHHS Trigger: AGAATGGTGTGATTCTGAGCAAATTGGTGAACAGCC...CCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS GCA 90 bp | AAGCCCAGGCGCCCACGATCTGGGCGGCCTACATCAGGGCCACACTaGACTACAATCCACTCCACTAGTCGCTCCTCCAGCTCCTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: KPRRPRSGRPTSGPH*TTIHSTSRSSSSSS Trigger: TGACGAGGAGCTGGAGGAGCGACTAGTGGAGTGGATTGTAGTGCAGTGTGGCCCTGATGTAGGCCGCCCAGATCGTGGGCGCCTGGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS CCA 90 bp | CTGTTCACCAATTTGCTCAGAATCACACCATTCTTCAGCCACACCTaGAAGCCCAGGCGCCCACGATCTGGGCGGCCTACATCAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LFTNLLRITPFFSHT*KPRRPRSGRPTSGP Trigger: TGGCCCTGATGTAGGCCGCCCAGATCGTGGGCGCCTGGGCTTCCAGGTGTGGCTGAAGAATGGTGTGATTCTGAGCAAATTGGTGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS-3UTR CAA 90 bp | AGATGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGCTTCCCCTCCTGCAGTaGGCTGTCTGTGAAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RCRGWAGSPSKDIRYQGQLPLLQ*AVCEVP Trigger: AGGGACTTCACAGACAGCCAACTGCAGGAGGGGAAG...CTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS CCA 90 bp | CATCTGCTTAAAGACCATGGAGGGTGGGTTCTCAGGCACCTTCACTaGCTTCGATCCCTCAGGATACAGGCTGTTCACCAATTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: HLLKDHGGWVLRHLH*LRSLRIQAVHQFAQ Trigger: CTGAGCAAATTGGTGAACAGCCTGTATCCTGAGGGATCGAAGCCAGTGAAGGTGCCTGAGAACCCACCCTCCATGGTCTTTAAGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS-3UTR CAA 90 bp | TGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGTCTGTTGCTGCCCATTaGAAGGCCAATGACGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: CRGWAGSPSKDIRYQGQWSVAAH*KANDVL Trigger: AAGCACGTCATTGGCCTTCAAATGGGCAGCAACAGA...CCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS-3UTR CAA 90 bp | TGTAGAGGCTGGGCTGGGTCTCCTTCAAAGGACATTCGATATCAAGGACAGTGGAGGCTGTTCACCAATTaGCTCAGAATCACACCATTC | + |
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Preference number: 5 (lower is better) Translates to: CRGWAGSPSKDIRYQGQWRLFTN*LRITPF Trigger: GAATGGTGTGATTCTGAGCAAATTGGTGAACAGCCT...CCACTGTCCTTGATATCGAATGTCCTTTGAAGGAGACCCAGCCCAGCCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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| CDS GCA 72 bp | CGCCCACGATCTGGGCGGCCTACATCAGGGCCACACTaGACTACAATCCACTCCACTAGTCGCTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RPRSGRPTSGPH*TTIHSTSRSSS Trigger: GCTGGAGGAGCGACTAGTGGAGTGGATTGTAGTGCAGTGTGGCCCTGATGTAGGCCGCCCAGATCGTGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS CCA 72 bp | CTTCAGCCACACCTGGAAGCCCAGGCGCCCACGATCTaGGCGGCCTACATCAGGGCCACACTGCACTACAAT | + |
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Preference number: 6 (lower is better) Translates to: LQPHLEAQAPTI*AAYIRATLHYN Trigger: ATTGTAGTGCAGTGTGGCCCTGATGTAGGCCGCCCAGATCGTGGGCGCCTGGGCTTCCAGGTGTGGCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS CCA 72 bp | AGCCACCTGTTCCATCTGCTTAAAGACCATGGAGGGTaGGTTCTCAGGCACCTTCACTGGCTTCGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SHLFHLLKDHGG*VLRHLHWLRSL Trigger: GAGGGATCGAAGCCAGTGAAGGTGCCTGAGAACCCACCCTCCATGGTCTTTAAGCAGATGGAACAGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS CCA 72 bp | AAAGACCATGGAGGGTGGGTTCTCAGGCACCTTCACTaGCTTCGATCCCTCAGGATACAGGCTGTTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: KDHGGWVLRHLH*LRSLRIQAVHQ Trigger: TTGGTGAACAGCCTGTATCCTGAGGGATCGAAGCCAGTGAAGGTGCCTGAGAACCCACCCTCCATGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS GCA 72 bp | GCTTCGATCCCTCAGGATACAGGCTGTTCACCAATTTaGTCAGAATCACACCATTCTTCAGCCACACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ASIPQDTGCSPI*SESHHSSATPG Trigger: TCCAGGTGTGGCTGAAGAATGGTGTGATTCTGAGCAAATTGGTGAACAGCCTGTATCCTGAGGGATCGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034590.4 ENSMUST00000215509.2 |
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| CDS CCA 72 bp | ACCAGTTGGGATCTCCACGGTAGTTTCCATCGTTTTTaGTCACAGCCAAACTGCCCAAAGCCATTAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TSWDLHGSFHRF*SQPNCPKPLES Trigger: GGACTCTAATGGCTTTGGGCAGTTTGGCTGTGACCAAAAACGATGGAAACTACCGTGGAGATCCCAACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034590.4 |
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