Pregenerated sensors for TAGAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052031Ensembl transcript IDs: ENSMUST00000063683.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACACTGAGTTCTaGATGAGCTTATCTGTGACTCAACAGACAGTTCTCTGCAGTCGC | + |
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Preference number: 1 (lower is better) Translates to: HHVSHPHRGEPHTEF*MSLSVTQQTVLCSR Trigger: GCGACTGCAGAGAACTGTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR TCA 90 bp | TTGGTGTCACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACACTaGGTTCTGAATGAGCTTATCTGTGACTCAACAGACAGTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LVSPCEPSSQRRAAH*VLNELICDSTDSSL Trigger: CAGAGAACTGTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR GCA 90 bp | GTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTaGTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACCTACA | + |
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Preference number: 1 (lower is better) Translates to: VFQSVPFYDADSSQA*LGEDASEAQTFPPT Trigger: TGTAGGTGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR CCA 90 bp | CATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTaGTGTCACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACACT | + |
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Preference number: 1 (lower is better) Translates to: HLLHIAQTRLHTGKI*CHHVSHPHRGEPHT Trigger: AGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR CAA 90 bp | ACATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTaGGTGTCACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACAC | + |
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Preference number: 2 (lower is better) Translates to: TFTTYCTNPVTHRQN*VSPCEPSSQRRAAH Trigger: GTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR-3UTR GCA 90 bp | CTTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACACATACAGAAGTGCATaGATGAAGGGATGTACGCAG | + |
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Preference number: 2 (lower is better) Translates to: LIQDSPMHTTVLTTTQLHTYRSA*MKGCTQ Trigger: CTGCGTACATCCCTTCATGCATGCACTTCTGTATGT...GTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGTACAGTGTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAAACAACATACAGAAGTaGATGCATGAAGGGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: TKYSVFQSVPFYDADSSQNNIQK*MHEGMY Trigger: GTACATCCCTTCATGCATGCACTTCTGTATGTTGTT...TTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGACACTGTACTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR TCA 72 bp | CCCGGTTACACACAGGCAAAATTTGGTGTCACCATGTaGGCCATCCTCACAGAGGAGAGCCGCACACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: PGYTQAKFGVTM*AILTEESRTLS Trigger: ACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGTGTGTAACCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR TCA 72 bp | CCATGTGAGCCATCCTCACAGAGGAGAGCCGCACACTaGGTTCTGAATGAGCTTATCTGTGACTCAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: PCEPSSQRRAAH*VLNELICDSTD Trigger: GTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR TCA 72 bp | AGCCATCCTCACAGAGGAGAGCCGCACACTGAGTTCTaGATGAGCTTATCTGTGACTCAACAGACAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SHPHRGEPHTEF*MSLSVTQQTVL Trigger: GAGAACTGTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR GCA 72 bp | ATAAACTCTACTGAAGTCTTATACAAGACTCCCCAATaGATACAACAGTGCTTACCACTACACAGCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: INSTEVLYKTPQ*IQQCLPLHSCT Trigger: TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAAGACTTCAGTAGAGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCAAAATTTGGTGTCACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACCTGTTCTCCAGCGTCTaGACCAGCAGGTCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGKIWCHHVSHPHRGEPHLFSSV*TSRSRS Trigger: GCTGCGCGACCTGCTGGTGCAGACGCTGGAGAACAG...GTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CCA 90 bp | GTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACCTACTCACAGGTGTCCCGGTaGCCCCGGGTATCCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: VSSLLRRRCIRGSDISTYSQVSR*PRVSRP Trigger: TGGTCTGGATACCCGGGGCCACCGGGACACCTGTGA...GTAGGTGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTGCTTAGGAGTGGGACCCTCCAGTTaGCTGTTGGGAGAGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: VFQSVPFYDADSSQACLGVGPSS*LLGEAA Trigger: CGCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCAC...TCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | CTGATGGGTCACACACCAAGTACAGTGTCTTTCAGTCTGTTCCCTTCTATGATGCCTGTTGGGAGAGGCTaGGCCACTTGTGGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LMGHTPSTVSFSLFPSMMPVGRG*ATCGLH Trigger: GTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGG...CATCATAGAAGGGAACAGACTGAAAGACACTGTACTTGGTGTGTGACCCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CCA 90 bp | GTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTGCTTAGGATTGTTAGCTTTTGCTTaGATGTTGGGCCCACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VFQSVPFYDADSSQACLGLLAFA*MLGPRG Trigger: GCCTCGTGGGCCCAACATCCAAGCAAAAGCTAACAA...TCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR TCA 90 bp | GTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTGCTTAGGAGGCAGCACTTTCTTGTaGGACGCAAAGGAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: VFQSVPFYDADSSQACLGGSTFL*DAKENN Trigger: GTTGTTTTCCTTTGCGTCTCACAAGAAAGTGCTGCC...TCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | ACCAAGTACAGTGTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAACAGGTCTCTTGGGTTTaGTGTCCACTGCTGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TKYSVFQSVPFYDADSSQQVSWV*CPLLGR Trigger: TCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTG...TTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGACACTGTACTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CCA 90 bp | AGATGCATCAGAGGCTCAGACATTTCCACCTACATGCAGCTGGCGGCTAATGTGAAGCCCAAAGATGTTTaGCTTTGGATTTCTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: RCIRGSDISTYMQLAANVKPKDV*LWISDS Trigger: TGAGTCAGAAATCCAAAGCCAAACATCTTTGGGCTT...CACATTAGCCGCCAGCTGCATGTAGGTGGAAATGTCTGAGCCTCTGATGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| 3UTR CAA 72 bp | ACATATTGCACAAACCCGGTTACACACAGGCAAAATTaGGTGTCACCATGTGAGCCATCCTCACAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TYCTNPVTHRQN*VSPCEPSSQRR Trigger: TCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCATCCACATCTGGGTCATTaGTGTCATAGGCCGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHHPHLGH*CHRPSH Trigger: ATGACTCGGCCTATGACAGCAATGACCCAGATGTGG...ATGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CCA 90 bp | AGATGCATCAGAGGCTCAGACATTTCCACCTACATGCAGCTGGCGGCTAATGTGAAAGATGTTTGGCTTTaGATTTCTGACTCATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RCIRGSDISTYMQLAANVKDVWL*ISDSFS Trigger: GGAAAATGAGTCAGAAATCCAAAGCCAAACATCTTT...CACATTAGCCGCCAGCTGCATGTAGGTGGAAATGTCTGAGCCTCTGATGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR GCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCATGAAAACAACATGGAGTaGTTTCTAATTTCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHHENNME*FLISLW Trigger: CCAGAGAGAAATTAGAAAGCACTCCATGTTGTTTTC...ATGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CCA 90 bp | TTTATACATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGAACCGCCTGTCTTGTTaGACAATGGAGTTTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIHLLHIAQTRLHTGKIWNRLSC*TMEFFS Trigger: GCTGAAAAACTCCATTGTCCAACAAGACAGGCGGTT...CCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATGTATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS TCA 90 bp | GCTCAGTCACAGAAGACAATCTGTGTCCACCAGGTGTCCCTTCACTaGGGTCACCTCCATGGTGAGAAGGCACAGGGGGCACCGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: AQSQKTICVHQVSLH*GHLHGEKAQGAPLC Trigger: GCACAGCGGTGCCCCCTGTGCCTTCTCACCATGGAGGTGACCTCAGTGAAGGGACACCTGGTGGACACAGATTGTCTTCTGTGACTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS GCA 90 bp | GCGTCCTGGGACAGAGTGAAGCTGTCCTCACTCCTTGTTAGCTTTTaGTTGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGTGACATG | + |
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Preference number: 5 (lower is better) Translates to: ASWDRVKLSSLLVSF*LDVGPTRHSREGDM Trigger: CATGTCACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS TCA 90 bp | CTTCAGCTTCATCGCCTTCAGAACAGGAGGCGTCCTGGGACAGAGTaGAGCTGTCCTCACTCCTTGTTAGCTTTTGCTTGGATGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LQLHRLQNRRRPGTE*SCPHSLLAFAWMLG Trigger: GCCCAACATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATGAAGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 90 bp | TCTCGTGAGGGTGACATGTTGGGTTCAGAGAACCGCCTGTCTTGTTaGACAATGGAGTTTTTCAGCCTGACTACCATGCTAACGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SREGDMLGSENRLSC*TMEFFSLTTMLTLD Trigger: GTCCAGCGTTAGCATGGTAGTCAGGCTGAAAAACTCCATTGTCCAACAAGACAGGCGGTTCTCTGAACCCAACATGTCACCCTCACGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCATGTGAGCCATCCTCACAGAGGAGAGCCGCACAGCTGTCCTCACTCCTaGTTAGCTTTTGCTTGGATG | + |
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Preference number: 5 (lower is better) Translates to: TGKIWCHHVSHPHRGEPHSCPHS*LAFAWM Trigger: CATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCT...GTGCGGCTCTCCTCTGTGAGGATGGCTCACATGGTGACACCAAATTTTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 90 bp | AGGGCCCAGGTGCCAGACAAGCTGAAGCCCAAAGATGTTTGGCTTTaGATTTCTGACTCATTTTCCTGGACGATTCTGCCAGAAAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: RAQVPDKLKPKDVWL*ISDSFSWTILPESW Trigger: CCAACTTTCTGGCAGAATCGTCCAGGAAAATGAGTCAGAAATCCAAAGCCAAACATCTTTGGGCTTCAGCTTGTCTGGCACCTGGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CAA 90 bp | GTCTTTCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTGCTTAGGAACCGCTGTGCTTGGCTaGAACATTCTTGACCTCATA | + |
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Preference number: 5 (lower is better) Translates to: VFQSVPFYDADSSQACLGTAVLG*NILDLI Trigger: TATGAGGTCAAGAATGTTCAAGCCAAGCACAGCGGT...TCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS TCA 90 bp | GATTTCTCAGACCCAATGCTGGAGGTTCGGGGCAGCACTTTCTTGTaGGACGCAAAGGAAAACAACATGGAGTGCTTTCTAATTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DFSDPMLEVRGSTFL*DAKENNMECFLISL Trigger: GAGAGAAATTAGAAAGCACTCCATGTTGTTTTCCTTTGCGTCTCACAAGAAAGTGCTGCCCCGAACCTCCAGCATTGGGTCTGAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS-3UTR CAA 90 bp | TTTATACATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGGAACCGCCTGTCTTGTaGGACAATGGAGTTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FIHLLHIAQTRLHTGKIWEPPVL*DNGVFQ Trigger: CTGAAAAACTCCATTGTCCAACAAGACAGGCGGTTC...CCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATGTATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS GCA 72 bp | TTGATGCGGTTCAGCACGCCGCTGTTCTCCAGCGTCTaGACCAGCAGGTCGCGCAGCTCCGTGTCTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LMRFSTPLFSSV*TSRSRSSVSSS Trigger: CGAGGAAGACACGGAGCTGCGCGACCTGCTGGTGCAGACGCTGGAGAACAGCGGCGTGCTGAACCGCATCAA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | TGGGAGTGGGACCCTCCAGTTGCCTGTTGGGAGAGGCTGCGCCACTaGTGGGCTCCACATCTGGGTCATTGCTGTCATAGGCCGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: WEWDPPVACWERLRH*WAPHLGHCCHRPSH Trigger: ATGACTCGGCCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCACTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | GTTGGGAGAGGCTGCGCCACTTGTGGGCTCCACATCTaGGTCATTGCTGTCATAGGCCGAGTCATTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VGRGCATCGLHI*VIAVIGRVILQ Trigger: CTGCAGAATGACTCGGCCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS TCA 72 bp | GGTGAGAAGGCACAGGGGGCACCGCTGTGCTTGGCTTaGACATTCTTGACCTCATACTCCCAACTGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GEKAQGAPLCLA*TFLTSYSQLSG Trigger: GCCAGACAGTTGGGAGTATGAGGTCAAGAATGTTCAAGCCAAGCACAGCGGTGCCCCCTGTGCCTTCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | TCCTGGGACAGAGTGAAGCTGTCCTCACTCCTTGTTAGCTTTTGCTaGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGTGACATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SWDRVKLSSLLVSFC*DVGPTRHSREGDML Trigger: CAACATGTCACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | GATGGTGGGCTTCCTGGTTTCCTCATATCCACTAACTGGAACGTGTaGTCGACTGAGAGGGCCCAGGTGCCAGACAAGCTGAAGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DGGLPGFLISTNWNV*STERAQVPDKLKPK Trigger: TTTGGGCTTCAGCTTGTCTGGCACCTGGGCCCTCTCAGTCGACAACACGTTCCAGTTAGTGGATATGAGGAAACCAGGAAGCCCACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS GCA 72 bp | GACAGAGTGAAGCTGTCCTCACTCCTTGTTAGCTTTTaGTTGGATGTTGGGCCCACGAGGCACTCTCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DRVKLSSLLVSF*LDVGPTRHSRE Trigger: CTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCTTCACTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | TCTTCAGCTTCATCGCCTTCAGAACAGGAGGCGTCCTaGGACAGAGTGAAGCTGTCCTCACTCCTTGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSASSPSEQEAS*DRVKLSSLLVS Trigger: GCTAACAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATGAAGCTGAAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | CAGGTGAGCTGCCCAAAGATTCGCCTGGGGAGGATCTaGAGAAAGCTTTGGTTATGTGTCCCTGTGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: QVSCPKIRLGRI*RKLWLCVPVEM Trigger: CATCTCCACAGGGACACATAACCAAAGCTTTCTCCAGATCCTCCCCAGGCGAATCTTTGGGCAGCTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | CTAGCACAGCAGAGTTGGTCAGCCTCAAAGACTAAGTaGCTGTGTTGTGGCCCAAGACAGTCCAGCTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LAQQSWSASKTK*LCCGPRQSSLA Trigger: GGCTAAGCTGGACTGTCTTGGGCCACAACACAGCCACTTAGTCTTTGAGGCTGACCAACTCTGCTGTGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 72 bp | AGAGTGAAGCTGTCCTCACTCCTTGTTAGCTTTTGCTaGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RVKLSSLLVSFC*DVGPTRHSREG Trigger: ACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAACAAGGAGTGAGGACAGCTTCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS TCA 72 bp | TGTTGTCGACTGAGAGGGCCCAGGTGCCAGACAAGCTaGAGCCCAAAGATGTTTGGCTTTGGATTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: CCRLRGPRCQTS*SPKMFGFGFLT Trigger: AGTCAGAAATCCAAAGCCAAACATCTTTGGGCTTCAGCTTGTCTGGCACCTGGGCCCTCTCAGTCGACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | CCAAAGATTCGCCTGGGGAGGATCTGGAGAAAGCTTTaGTTATGTGTCCCTGTGGAGATGCTAAACCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PKIRLGRIWRKL*LCVPVEMLNLG Trigger: CCCAAGGTTTAGCATCTCCACAGGGACACATAACCAAAGCTTTCTCCAGATCCTCCCCAGGCGAATCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | CAAATCCACAGGTCTCTTGGGTTTGCTGTCCACTGCTaGGAAGACTTCCTCTGTAAAGGGATCTTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QIHRSLGFAVHC*EDFLCKGIFSF Trigger: GAAGCTGAAGATCCCTTTACAGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | CTCTCTTTCCTCAAGTCCTTCTGGAGTTGGTCTCTAGAAAAGTCTTaGGATTTCTCAGACCCAATGCTGGAGGTTCGGGGCAGCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSFLKSFWSWSLEKS*DFSDPMLEVRGSTF Trigger: GAAAGTGCTGCCCCGAACCTCCAGCATTGGGTCTGAGAAATCCAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | GGTGACATGTTGGGTTCAGAGAACCGCCTGTCTTGTTaGACAATGGAGTTTTTCAGCCTGACTACCATGCTA | + |
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Preference number: 6 (lower is better) Translates to: GDMLGSENRLSC*TMEFFSLTTML Trigger: TAGCATGGTAGTCAGGCTGAAAAACTCCATTGTCCAACAAGACAGGCGGTTCTCTGAACCCAACATGTCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | TCTGACTCATTTTCCTGGACGATTCTGCCAGAAAGTTaGCTCTCTTTCCTCAAGTCCTTCTGGAGTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SDSFSWTILPES*LSFLKSFWSWS Trigger: AGACCAACTCCAGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATCGTCCAGGAAAATGAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | GTGCCAGACAAGCTGAAGCCCAAAGATGTTTGGCTTTaGATTTCTGACTCATTTTCCTGGACGATTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VPDKLKPKDVWL*ISDSFSWTILP Trigger: TGGCAGAATCGTCCAGGAAAATGAGTCAGAAATCCAAAGCCAAACATCTTTGGGCTTCAGCTTGTCTGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | GCTAAACCTTGGGTCCAATTCTTTATTTTCAAATCCACAGGTCTCTaGGGTTTGCTGTCCACTGCTGGGAAGACTTCCTCTGTAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: AKPWVQFFIFKSTGL*GLLSTAGKTSSVKG Trigger: TCCCTTTACAGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTGAAAATAAAGAATTGGACCCAAGGTTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CAA 90 bp | GATTCTGCCAGAAAGTTGGCTCTCTTTCCTCAAGTCCTTCTGGAGTaGGTCTCTAGAAAAGTCTTTGGATTTCTCAGACCCAATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DSARKLALFPQVLLE*VSRKVFGFLRPNAG Trigger: TCCAGCATTGGGTCTGAGAAATCCAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | CTGCCAGAAAGTTGGCTCTCTTTCCTCAAGTCCTTCTaGAGTTGGTCTCTAGAAAAGTCTTTGGATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LPESWLSFLKSF*SWSLEKSLDFS Trigger: TGAGAAATCCAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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| CDS CCA 72 bp | GCTTTGGTTATGTGTCCCTGTGGAGATGCTAAACCTTaGGTCCAATTCTTTATTTTCAAATCCACAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ALVMCPCGDAKP*VQFFIFKSTGL Trigger: GAGACCTGTGGATTTGAAAATAAAGAATTGGACCCAAGGTTTAGCATCTCCACAGGGACACATAACCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063683.8 |
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