Pregenerated sensors for TAGAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033450Ensembl transcript IDs: ENSMUST00000036370.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACACTGAGTTCTaGATGAGCTTATCTGTGACTCAACAGACAGTTCTCTGCAGTCGC | + |
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Preference number: 1 (lower is better) Translates to: HRVSHPHRGEPHTEF*MSLSVTQQTVLCSR Trigger: GCGACTGCAGAGAACTGTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR TCA 90 bp | TTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACACTaGGTTCTGAATGAGCTTATCTGTGACTCAACAGACAGTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LVSPCEPSSQRRAAH*VLNELICDSTDSSL Trigger: CAGAGAACTGTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR GCA 90 bp | GTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCCTaGTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACCTACA | + |
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Preference number: 1 (lower is better) Translates to: VFQSVPFYDADSSQA*LGEDASEAQTFPPT Trigger: TGTAGGTGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR CCA 90 bp | CATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTaGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACACT | + |
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Preference number: 1 (lower is better) Translates to: HLLHIAQTRLHTGKI*CHRVSHPHRGEPHT Trigger: AGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR CAA 90 bp | ACATTTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTaGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACAC | + |
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Preference number: 2 (lower is better) Translates to: TFTTYCTNPVTHRQN*VSPCEPSSQRRAAH Trigger: GTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR-3UTR GCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAACATACAGAAGTGAATaGATGAAGGGATGTACGCAG | + |
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Preference number: 2 (lower is better) Translates to: DSSQACLGEDASEAQTFPTYRSE*MKGCTQ Trigger: CTGCGTACATCCCTTCATGCATTCACTTCTGTATGT...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR-3UTR TCA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACACCGCACACTGAGTTCTaGATGAGCTTATCTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTPHTEF*MSLSVT Trigger: AGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGG...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGAAACAACATACAGAAGTaGATGCATGAAGGGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: MQLAANVNTGMAFAVTLRNNIQK*MHEGMY Trigger: GTACATCCCTTCATGCATTCACTTCTGTATGTTGTT...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTATTCCATTAGATGACTaGAAGACCTTCTCCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: AKDITSASNKLSKGGGQFIPLDD*KTFSQC Trigger: GCACTGGGAGAAGGTCTTTCAGTCATCTAATGGAAT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTCACAGGCATGGCATTTaGTGTAACATTAAGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: AKDITSASNKLSKGGGQFHRHGI*CNIKKS Trigger: ACTTTTCTTAATGTTACAGCAAATGCCATGCCTGTG...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR TCA 72 bp | CCCGGTTACACACAGGCAAAATTTGGTGTCACCGTGTaGGCCATCCTCACAGAGGAGAGCCGCACACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: PGYTQAKFGVTV*AILTEESRTLS Trigger: ACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGTGTGTAACCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR TCA 72 bp | CCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACACTaGGTTCTGAATGAGCTTATCTGTGACTCAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: PCEPSSQRRAAH*VLNELICDSTD Trigger: GTCTGTTGAGTCACAGATAAGCTCATTCAGAACTCAGTGTGCGGCTCTCCTCTGTGAGGATGGCTCACACGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR CCA 72 bp | CATATTGCACAAACCCGGTTACACACAGGCAAAATTTaGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: HIAQTRLHTGKI*CHRVSHPHRGE Trigger: CTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACGGCCACCGTAGGCTGTaGGTCCTGATGTCTGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHGHRRL*VLMSGN Trigger: ATTACCAGACATCAGGACTCACAGCCTACGGTGGCC...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACTTGCTAGCTTTTGCTTaGATGTTGGGCCCACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHLLAFA*MLGPRG Trigger: GCCTCGTGGGCCCAACATCCAAGCAAAAGCTAGCAA...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACGTCCTGGGACAGAGTaGAGCTGTCCTCACTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPRPGTE*SCPHSL Trigger: CAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACG...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAAGGCCACCAGCAACCTaGTTCAGGGCCTCGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPRPPAT*FRASIL Trigger: CAGAATCGAGGCCCTGAAGCAGGTTGCTGGTGGCCT...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAGTCTTCACTCTCACATaGTGTCAGCAGGGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPVFTLT*CQQGRH Trigger: GTGCCTCCCCTGCTGACATCATGTGAGAGTGAAGAC...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGACGTAGAGCAAGTGCCTaGGCAGGAGAAGGTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: MQLAANVNTGMAFAVTLRRRASA*AGEGWA Trigger: GGCCCAACCTTCTCCTGCTCAGGCACTTGCTCTACG...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACGTTCTCCCCACAGATaGTCGACAAGGGTTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPRSPHR*STRVGQ Trigger: TTGACCAACCCTTGTCGATCATCTGTGGGGAGAACG...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACCAGTTAGCTGGCAAATaGTGTCTTCACTCTCACATG | + |
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Preference number: 4 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHQLAGK*CLHSHM Trigger: CATGTGAGAGTGAAGACAGCATTTGCCAGCTAACTG...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGTTGTTCAGGTCCTTCTaGGCCTGGAAGGACAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKLFRSF*AWKDRL Trigger: GAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAA...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCTTTTGCTTGGATGTTaGGCCCACGAGGCACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKLLLGC*AHEALS Trigger: CGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAG...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGGAGAGAGCTTTCTCATaGGAGATGGCCAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKERAFS*EMARTA Trigger: TGCTGTCCTGGCCATCTCTCATGAGAAAGCTCTCTC...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCGCTGGCAGCTTTCCTaGATATCCCTTCCGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKRWQLS*ISLPLK Trigger: CTTCAACGGAAGGGATATTCAGGAAAGCTGCCAGCG...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAGGCAGCACTTTCTTGTaGGACGCAAAGGAAAACGAC | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPGSTFL*DAKEND Trigger: GTCGTTTTCCTTTGCGTCTCACAAGAAAGTGCTGCC...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTTCACAGGTGTCCCGTTaGCCCCGGGTATCCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRSQVSR*PRVSRP Trigger: TGGTCTGGATACCCGGGGCCAACGGGACACCTGTGA...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCACGCCTGGGGAGGATCTaGAGAAAGCTTTGGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: DSSQACLGEDASEAQTFPRLGRI*RKLWLC Trigger: ACATAACCAAAGCTTTCTCCAGATCCTCCCCAGGCG...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTCAGGTGTCCCTTCACTaGGGTCACCTCCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRQVSLH*GHLHGE Trigger: CTCACCATGGAGGTGACCTCAGTGAAGGGACACCTG...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACGAAAACGACATGGAGTaGTTTCTAATTTCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHENDME*FLISLW Trigger: CCAGAGAGAAATTAGAAAGCACTCCATGTCGTTTTC...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTTTCTGTCCTCCTCGGTaGGCTTCTCCAGGGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFFCPPR*ASPGRP Trigger: TGGGCGCCCTGGAGAAGCCCACCGAGGAGGACAGAA...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGAGGCCTCTTCGTAAGATaGTGGGCTTCCTGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: MQLAANVNTGMAFAVTLRGLFVR*WASWFP Trigger: AGGAAACCAGGAAGCCCACCATCTTACGAAGAGGCC...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| 3UTR CAA 72 bp | ACATATTGCACAAACCCGGTTACACACAGGCAAAATTaGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TYCTNPVTHRQN*VSPCEPSSQRR Trigger: TCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATGCAGGGGAGGCACTTTaGTATCACCCTCTGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: TYRSECMKGCTQTPFASNAGEAL*YHPLTD Trigger: GTCAGTCAGAGGGTGATATCAAAGTGCCTCCCCTGC...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTCCTCCTTCAGCTCCTTaGGGGCTTTCTCGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFPPSAP*GLSRWQ Trigger: CTGCCAGCGAGAAAGCCCGCAAGGAGCTGAAGGAGG...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATAGGCACAGGGGGCACTaGTGTGCTTGGCTTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: TYRSECMKGCTQTPFASNRHRGH*CAWLEH Trigger: ATGTTCAAGCCAAGCACAGCAGTGCCCCCTGTGCCT...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACAATGGTGAGGATGTCCTaGATGGGTCTGGGAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTMVRMS*MGLGSV Trigger: CACACTTCCCAGACCCATCCAGGACATCCTCACCAT...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTAGGTCCTTCTGGGCCTaGAAGGACAGGCTCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFRSFWA*KDRLWS Trigger: CGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGAAATCCACAGGTCTCTTaGGTTTGCTGTCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MQLAANVNTGMAFAVTLRNPQVS*VCCPLL Trigger: CAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATT...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGATGGCTTGAACATTCTTaGCCTCATACTCCCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: MQLAANVNTGMAFAVTLRWLEHS*PHTPNC Trigger: ACAGTTGGGAGTATGAGGTCAAGAATGTTCAAGCCA...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTACCACAGCTAGGAGGTaGACAGGGAGCTGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFTTARR*TGSCFR Trigger: TCTGAAGCAGCTCCCTGTGCACCTCCTAGCTGTGGT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTTGTCCTGGATGGGTCTaGGAAGTGTGTCGTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFCPGWV*EVCRSP Trigger: GGGAGAACGACACACTTCCCAGACCCATCCAGGACA...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTGTAGGCTGTGAGTCCTaGTGTCTGGTAATAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRVGCES*CLVING Trigger: GCCATTTATTACCAGACATCAGGACTCACAGCCTAC...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTGAGACATGGACAGTCTaGCTGTGTGTCCAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFETWTV*LCVQCS Trigger: TGAGCACTGGACACACAGTCAGACTGTCCATGTCTC...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR TCA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATAGCTCAGATCTCCCCTaGGTTTCTATAGAGACATGG | + |
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Preference number: 4 (lower is better) Translates to: TYRSECMKGCTQTPFASNSSDLP*VSIETW Trigger: CCATGTCTCTATAGAAACTCAGGGGAGATCTGAGCT...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACACTTTCTCATGAGAGATaGCCAGGACAGCACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTLSHER*PGQHFL Trigger: AAGAAAGTGCTGTCCTGGCCATCTCTCATGAGAAAG...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CCA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATCTCTTCGTAAGATGGTaGGCTTCCTGGTTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TYRSECMKGCTQTPFASNLFVRW*ASWFPH Trigger: ATGAGGAAACCAGGAAGCCCACCATCTTACGAAGAG...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTATGATCGACAAGGGTTaGTCAAACAGCGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRMIDKG*SNSDTF Trigger: GAAAGTGTCGCTGTTTGACCAACCCTTGTCGATCAT...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGGGAGATGCTAAACCTTaGGTCCAATTCTTTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKGDAKP*VQFFIF Trigger: GAAAATAAAGAATTGGACCCAAGGTTTAGCATCTCC...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACATTCCTCAAGTCCTTCTaGAGTTGGTCTCTAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTFLKSF*SWSLEK Trigger: CTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAA...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTGAATATCCCTTCCGTTaGAGGACCTTTAAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFEYPFR*RTFKAE Trigger: CTCTGCCTTAAAGGTCCTTCAACGGAAGGGATATTC...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR TCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTTTGGCTTTGGATTTCTaGCTCATTTTCCTGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRLALDF*LIFLDD Trigger: ATCGTCCAGGAAAATGAGTCAGAAATCCAAAGCCAA...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTAAGCCCAGAGATGTTTaGCTTTGGATTTCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRKPRDV*LWISDS Trigger: TGAGTCAGAAATCCAAAGCCAAACATCTCTGGGCTT...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTCAAAGCAGTTGTCGATaGGGAATTCCACCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFQSSCR*GIPPRS Trigger: AGATCTTGGTGGAATTCCTCATCGACAACTGCTTTG...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTATCTGGAGAAAGCTTTaGTTATGTGTCCCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFIWRKL*LCVPVE Trigger: CTCCACAGGGACACATAACCAAAGCTTTCTCCAGAT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATAAGTCCTTCTGGAGTTaGTCTCTAGAAAAGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TYRSECMKGCTQTPFASNKSFWS*SLEKSL Trigger: CAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTT...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTATTCTGCCAGAAAGTTaGCTCTCTTTCCTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFILPES*LSFLKS Trigger: GGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAAT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTAGCATTAAGTGTTTTTaGACCATCGAGACTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFSIKCF*TIETAY Trigger: ATAAGCAGTCTCGATGGTTCAAAAACACTTAATGCT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTAGAGATGTTTGGCTTTaGATTTCTGACTCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKDITSASNKLSKGGGQFRDVWL*ISDSFS Trigger: GGAAAATGAGTCAGAAATCCAAAGCCAAACATCTCT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | GGCCACCAGCAACCTGCTTCAGGGCCTCGATTCTGTCCTCCTCGGTaGGCTTCTCCAGGGCGCCCATCCAGTCCTCAAAGAGATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHQQPASGPRFCPPR*ASPGRPSSPQRDHR Trigger: CCTGTGATCTCTTTGAGGACTGGATGGGCGCCCTGGAGAAGCCCACCGAGGAGGACAGAATCGAGGCCCTGAAGCAGGTTGCTGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | ACCATGCTAACGCTGGACTCTGAGCTTGACTCACAGGTGTCCCGTTaGCCCCGGGTATCCAGACCAGCCATTGTGGGAGTGGGACCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TMLTLDSELDSQVSR*PRVSRPAIVGVGPS Trigger: GGAGGGTCCCACTCCCACAATGGCTGGTCTGGATACCCGGGGCCAACGGGACACCTGTGAGTCAAGCTCAGAGTCCAGCGTTAGCATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS GCA 90 bp | AGCCATTGTGGGAGTGGGACCCTCCAGTTGCCTGTTGGGAGAGGCTaGGCCACTTGTGGGCTCCACATCTGGGTCATTGCTGTCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHCGSGTLQLPVGRG*ATCGLHIWVIAVIG Trigger: GCCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCACTCCCACAATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | GCTCAGTCACAGAAGACAATCTGTGTCCACCAGGTGTCCCTTCACTaGGGTCACCTCCATGGTGAGAAGGCACAGGGGGCACTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQSQKTICVHQVSLH*GHLHGEKAQGALLC Trigger: GCACAGCAGTGCCCCCTGTGCCTTCTCACCATGGAGGTGACCTCAGTGAAGGGACACCTGGTGGACACAGATTGTCTTCTGTGACTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS GCA 90 bp | CGGAGGAAGTCCTTGAAGACCACAGCTAGGAGGTGCACAGGGAGCTaGTTCAGATTCACGGAGACCCCACAGTTAAGCCCCTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRKSLKTTARRCTGS*FRFTETPQLSPSFS Trigger: GCTGAAGGAGGGGCTTAACTGTGGGGTCTCCGTGAATCTGAAGCAGCTCCCTGTGCACCTCCTAGCTGTGGTCTTCAAGGACTTCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS GCA 90 bp | GCGTCCTGGGACAGAGTGAAGCTGTCCTCACTCCTTGCTAGCTTTTaGTTGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGTGACATG | + |
|
Preference number: 5 (lower is better) Translates to: ASWDRVKLSSLLASF*LDVGPTRHSREGDM Trigger: CATGTCACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | CACCTCCATGGTGAGAAGGCACAGGGGGCACTGCTGTGCTTGGCTTaGACATTCTTGACCTCATACTCCCAACTGTCTGGCCACCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLHGEKAQGALLCLA*TFLTSYSQLSGHRR Trigger: CCTACGGTGGCCAGACAGTTGGGAGTATGAGGTCAAGAATGTTCAAGCCAAGCACAGCAGTGCCCCCTGTGCCTTCTCACCATGGAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS GCA 90 bp | AGGGGTATCCCTCGGAGGAAGTCCTTGAAGACCACAGCTAGGAGGTaGACAGGGAGCTGCTTCAGATTCACGGAGACCCCACAGTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGIPRRKSLKTTARR*TGSCFRFTETPQLS Trigger: GCTTAACTGTGGGGTCTCCGTGAATCTGAAGCAGCTCCCTGTGCACCTCCTAGCTGTGGTCTTCAAGGACTTCCTCCGAGGGATACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACGCTTTTGCTTGGATGTaGGGCCCACGAGGCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHAFAWM*GPRGTL Trigger: GAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGC...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS GCA 90 bp | TGTTGGGAGAGGCTGCGCCACTTGTGGGCTCCACATCTGGGTCATTaGTGTCATAGGCCGAGTCATTCTGCAGAGTTGACACGTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CWERLRHLWAPHLGH*CHRPSHSAELTRLN Trigger: GTTCAGACGTGTCAACTCTGCAGAATGACTCGGCCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAAGTGGGACCCTCCAGTaGCCTGTTGGGAGAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSSQACLGEDASEAQTFPSGTLQ*PVGRGC Trigger: GCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCACT...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACACAGGTCTCTTGGGTTaGCTGTCCACTGCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHTGLLG*LSTAGK Trigger: CTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGT...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | CTTGCGGGCTTTCTCGCTGGCAGCTTTCCTGAATATCCCTTCCGTTaGAGGACCTTTAAGGCAGAGGATGGTGAGGATGTCCTGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGFLAGSFPEYPFR*RTFKAEDGEDVLDG Trigger: CCCATCCAGGACATCCTCACCATCCTCTGCCTTAAAGGTCCTTCAACGGAAGGGATATTCAGGAAAGCTGCCAGCGAGAAAGCCCGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | CTTCAGCTTCATCGCCTTCAGAACAGGAGGCGTCCTGGGACAGAGTaGAGCTGTCCTCACTCCTTGCTAGCTTTTGCTTGGATGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQLHRLQNRRRPGTE*SCPHSLLAFAWMLG Trigger: GCCCAACATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATGAAGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | GCTTGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGTGACATGTTaGGTTCAGAGAACCGCCTGTCTTGTTGGACAATGGAGCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWMLGPRGTLVRVTC*VQRTACLVGQWSFS Trigger: TGAAAAGCTCCATTGTCCAACAAGACAGGCGGTTCTCTGAACCCAACATGTCACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | GGATGTCCTGGATGGGTCTGGGAAGTGTGTCGTTCTCCCCACAGATaGTCGACAAGGGTTGGTCAAACAGCGACACTTTCAGCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCPGWVWEVCRSPHR*STRVGQTATLSALV Trigger: AACCAGAGCTGAAAGTGTCGCTGTTTGACCAACCCTTGTCGATCATCTGTGGGGAGAACGACACACTTCCCAGACCCATCCAGGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | TCTGGTGAAGAAGTTTCTCTTGGGGCAGGATGGAGAAGGCACAGGTaGGCTGCCCAAAGATTCGCCTGGGGAGGATCTGGAGAAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGEEVSLGAGWRRHR*AAQRFAWGGSGESF Trigger: AAAGCTTTCTCCAGATCCTCCCCAGGCGAATCTTTGGGCAGCTCACCTGTGCCTTCTCCATCCTGCCCCAAGAGAAACTTCTTCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGACCCTCCTTCAGCTCCTaGCGGGCTTTCTCGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MQLAANVNTGMAFAVTLRPSFSS*RAFSLA Trigger: TGCCAGCGAGAAAGCCCGCAAGGAGCTGAAGGAGGG...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTCTGAGCAGGAGAAGGTaGGGCCGGGGGAGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRLSRRR*GRGRPP Trigger: TGGTGGCCTCCCCCGGCCCAACCTTCTCCTGCTCAG...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACTTGCTGGAGTCCATCTaGTTGACCTCAGCGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHLLESI*LTSAFL Trigger: CAAGAACGCTGAGGTCAACAAGATGGACTCCAGCAA...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | TCTCGTGAGGGTGACATGTTGGGTTCAGAGAACCGCCTGTCTTGTTaGACAATGGAGCTTTTCAGCCTGACTACCATGCTAACGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SREGDMLGSENRLSC*TMELFSLTTMLTLD Trigger: GTCCAGCGTTAGCATGGTAGTCAGGCTGAAAAGCTCCATTGTCCAACAAGACAGGCGGTTCTCTGAACCCAACATGTCACCCTCACGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | GTAAAGGGATCTTCAGCTTCATCGCCTTCAGAACAGGAGGCGTCCTaGGACAGAGTGAAGCTGTCCTCACTCCTTGCTAGCTTTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VKGSSASSPSEQEAS*DRVKLSSLLASFCL Trigger: CAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATGAAGCTGAAGATCCCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCATTGACCTCAGCGTTCTaGCTGATGAGGTGGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DSSQACLGEDASEAQTFPLTSAF*LMRWST Trigger: CGTGCTCCACCTCATCAGCAAGAACGCTGAGGTCAA...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACAGTCATTCTGCAGAGTaGACACGTCTGAACTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHSHSAE*TRLNCQ Trigger: CTGACAGTTCAGACGTGTCAACTCTGCAGAATGACT...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACACCCTCCAGTTGCCTGTaGGGAGAGGCTGCGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTPSSCL*GEAAPL Trigger: AAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGG...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAAAATTTGGTGTCACCGTGTGAGCCATCCTCACAGAGGAGAGCCGCACGATCTGGAGAAAGCTTaGGTTATGTGTCCCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGKIWCHRVSHPHRGEPHDLEKA*VMCPCG Trigger: TCCACAGGGACACATAACCAAAGCTTTCTCCAGATC...GTGCGGCTCTCCTCTGTGAGGATGGCTCACACGGTGACACCAAATTTTGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | TTGACACGTCTGAACTGTCAGTGTGTTCCAGGGAGTCGTCAGAAGTaGTGCGGGAACGCGTCCGAATGTTCTCCCCAAATATCTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTRLNCQCVPGSRQK*CGNASECSPQISQS Trigger: GCTTTGAGATATTTGGGGAGAACATTCGGACGCGTTCCCGCATCACTTCTGACGACTCCCTGGAACACACTGACAGTTCAGACGTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | AGGGCCCAGGTGCCAGACAAGCTGAAGCCCAGAGATGTTTGGCTTTaGATTTCTGACTCATTTTCCTGGACGATTCTGCCAGAAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAQVPDKLKPRDVWL*ISDSFSWTILPESW Trigger: CCAACTTTCTGGCAGAATCGTCCAGGAAAATGAGTCAGAAATCCAAAGCCAAACATCTCTGGGCTTCAGCTTGTCTGGCACCTGGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS TCA 90 bp | ACATTCTTGACCTCATACTCCCAACTGTCTGGCCACCGTAGGCTGTaGGTCCTGATGTCTGGTAATAAATGGCCTCTTCGTAAGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLTSYSQLSGHRRL*VLMSGNKWPLRKMV Trigger: CACCATCTTACGAAGAGGCCATTTATTACCAGACATCAGGACTCACAGCCTACGGTGGCCAGACAGTTGGGAGTATGAGGTCAAGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | AATTCCACCAAGATCTTAACCTTATTGTTCAGGTCCTTCTGGGCCTaGAAGGACAGGCTCTGGTCGTTCTTCAGAGTGAGCATGTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NSTKILTLLFRSFWA*KDRLWSFFRVSMLG Trigger: GCCTAACATGCTCACTCTGAAGAACGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAATAAGGTTAAGATCTTGGTGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS CCA 90 bp | ATGAGGAATTCCACCAAGATCTTAACCTTATTGTTCAGGTCCTTCTaGGCCTGGAAGGACAGGCTCTGGTCGTTCTTCAGAGTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MRNSTKILTLLFRSF*AWKDRLWSFFRVSM Trigger: CATGCTCACTCTGAAGAACGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAATAAGGTTAAGATCTTGGTGGAATTCCTCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ACATACAGAAGTGAATGCATGAAGGGATGTACGCAGACACCCTTTGCATCTAATCCTCGGAGGAAGTCCTaGAAGACCACAGCTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TYRSECMKGCTQTPFASNPRRKS*KTTARR Trigger: CCTCCTAGCTGTGGTCTTCAAGGACTTCCTCCGAGG...ATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCATTCACTTCTGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGACTGGAGTCCATCTTGTaGACCTCAGCGTTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MQLAANVNTGMAFAVTLRLESIL*TSAFLL Trigger: CAGCAAGAACGCTGAGGTCAACAAGATGGACTCCAG...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGAAATCCACAGGTCTCTaGGGTTTGCTGTCCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKKSTGL*GLLSTA Trigger: AGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTT...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | GACTCGTCTCAAGCCTGCTTAGGAGAAGATGCATCAGAGGCTCAGACATTTCCAGATTCTGCCAGAAAGTaGGCTCTCTTTCCTCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: DSSQACLGEDASEAQTFPDSARK*ALFPQV Trigger: GACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATC...TGGAAATGTCTGAGCCTCTGATGCATCTTCTCCTAAGCAGGCTTGAGACGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 90 bp | GATTTCTCAGACCCAATGCTGGAGGTTCGGGGCAGCACTTTCTTGTaGGACGCAAAGGAAAACGACATGGAGTGCTTTCTAATTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DFSDPMLEVRGSTFL*DAKENDMECFLISL Trigger: GAGAGAAATTAGAAAGCACTCCATGTCGTTTTCCTTTGCGTCTCACAAGAAAGTGCTGCCCCGAACCTCCAGCATTGGGTCTGAGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGAGAACCGCCTGTCTTGTaGGACAATGGAGCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MQLAANVNTGMAFAVTLREPPVL*DNGAFQ Trigger: CTGAAAAGCTCCATTGTCCAACAAGACAGGCGGTTC...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 90 bp | CTTTATTTTCAAATCCACAGGTCTCTTGGGTTTGCTGTCCACTGCTaGGAAGACTTCCTCTGTAAAGGGATCTTCAGCTTCATCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYFQIHRSLGFAVHC*EDFLCKGIFSFIAF Trigger: GAAGGCGATGAAGCTGAAGATCCCTTTACAGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTGAAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTTATCCAGACCAGCCATaGTGGGAGTGGGACCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKDITSASNKLSKGGGQFYPDQP*WEWDPP Trigger: TGGAGGGTCCCACTCCCACAATGGCTGGTCTGGATA...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTGTGAAGAAGTTTCTCTaGGGGCAGGATGGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRVKKFL*GQDGEG Trigger: GCCTTCTCCATCCTGCCCCAAGAGAAACTTCTTCAC...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 90 bp | ATTCTTTATTTTCAAATCCACAGGTCTCTTGGGTTTGCTGTCCACTaGTGGGAAGACTTCCTCTGTAAAGGGATCTTCAGCTTCATCGCC | + |
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Preference number: 5 (lower is better) Translates to: ILYFQIHRSLGFAVH*WEDFLCKGIFSFIA Trigger: GGCGATGAAGCTGAAGATCCCTTTACAGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTGAAAATAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 90 bp | TGGACGATTCTGCCAGAAAGTTGGCTCTCTTTCCTCAAGTCCTTCTaGAGTTGGTCTCTAGAAAAGTCTTTGGATTTCTCAGACCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WTILPESWLSFLKSF*SWSLEKSLDFSDPM Trigger: CATTGGGTCTGAGAAATCCAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATCGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGCTGGCGGCTAATGTGAACACAGGCATGGCATTTGCTGTAACATTAAGAAAGATCTTAACCTTATaGTTCAGGTCCTTCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MQLAANVNTGMAFAVTLRKILTL*FRSFWA Trigger: GGCCCAGAAGGACCTGAACAATAAGGTTAAGATCTT...TCTTAATGTTACAGCAAATGCCATGCCTGTGTTCACATTAGCCGCCAGCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTACAGTGTCTTCCAGTCTGTTCCCTTCTATGATGCTGACTCGTCTCAAGCAAGTCCTTCTGGAGTaGGTCTCTAGAAAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSTVSSSLFPSMMLTRLKQVLLE*VSRKVF Trigger: AAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTG...CTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACACTGTACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 90 bp | CTTTGGATTTCTGACTCATTTTCCTGGACGATTCTGCCAGAAAGTTaGCTCTCTTTCCTCAAGTCCTTCTGGAGTTGGTCTCTAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LWISDSFSWTILPES*LSFLKSFWSWSLEK Trigger: CTTTTCTAGAGACCAACTCCAGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATCGTCCAGGAAAATGAGTCAGAAATCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTAGCTGTCCTCACTCCTaGCTAGCTTTTGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AKDITSASNKLSKGGGQFSCPHS*LAFAWM Trigger: CATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACACTCTGGGGTTTGGTTTaGTCTGTCTTTGTTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTLWGLV*SVFVVK Trigger: TTTCACAACAAAGACAGACAAAACCAAACCCCAGAG...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | TTACTACATATTGCACAAACCCGGTTACACACAGGCAAAATTTGGTGTCACCGTACTGCTGTGCTTGGCTaGAACATTCTTGACCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LLHIAQTRLHTGKIWCHRTAVLG*NILDLI Trigger: TATGAGGTCAAGAATGTTCAAGCCAAGCACAGCAGT...ACGGTGACACCAAATTTTGCCTGTGTGTAACCGGGTTTGTGCAATATGTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | TTATACAAGACTCCCCAATGCATACAACAGTGCTTACCACTACACAGCTGCACATCTCTAGAAAAGTCTTaGGATTTCTCAGACCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LYKTPQCIQQCLPLHSCTSLEKS*DFSDPM Trigger: CATTGGGTCTGAGAAATCCAAAGACTTTTCTAGAGA...TGTGCAGCTGTGTAGTGGTAAGCACTGTTGTATGCATTGGGGAGTCTTGTATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGGATATAACATCAGCAAGTAATAAACTGTCTAAAGGAGGAGGGCAGTTTATTTCTCTCTGGGGTTaGGTTTTGTCTGTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AKDITSASNKLSKGGGQFISLWG*VLSVFV Trigger: AACAAAGACAGACAAAACCAAACCCCAGAGAGAAAT...AAACTGCCCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | GGGAGTGGGACCCTCCAGTTGCCTGTTGGGAGAGGCTaGGCCACTTGTGGGCTCCACATCTGGGTCATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSGTLQLPVGRG*ATCGLHIWVIA Trigger: AGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCACTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | CCAGCCATTGTGGGAGTGGGACCCTCCAGTTGCCTGTaGGGAGAGGCTGCGCCACTTGTGGGCTCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: PAIVGVGPSSCL*GEAAPLVGSTS Trigger: AGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGGTCCCACTCCCACAATGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 72 bp | CAACCTGCTTCAGGGCCTCGATTCTGTCCTCCTCGGTaGGCTTCTCCAGGGCGCCCATCCAGTCCTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPASGPRFCPPR*ASPGRPSSPQR Trigger: TCTTTGAGGACTGGATGGGCGCCCTGGAGAAGCCCACCGAGGAGGACAGAATCGAGGCCCTGAAGCAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 72 bp | ACGCTGGACTCTGAGCTTGACTCACAGGTGTCCCGTTaGCCCCGGGTATCCAGACCAGCCATTGTGGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLDSELDSQVSR*PRVSRPAIVGV Trigger: CACTCCCACAATGGCTGGTCTGGATACCCGGGGCCAACGGGACACCTGTGAGTCAAGCTCAGAGTCCAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | GACCCTCCAGTTGCCTGTTGGGAGAGGCTGCGCCACTaGTGGGCTCCACATCTGGGTCATTGCTGTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: DPPVACWERLRH*WAPHLGHCCHR Trigger: CCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCTCTCCCAACAGGCAACTGGAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | GAAGTTTCTCTTGGGGCAGGATGGAGAAGGCACAGGTaGGCTGCCCAAAGATTCGCCTGGGGAGGATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EVSLGAGWRRHR*AAQRFAWGGSG Trigger: TCCAGATCCTCCCCAGGCGAATCTTTGGGCAGCTCACCTGTGCCTTCTCCATCCTGCCCCAAGAGAAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | CAGAAGACAATCTGTGTCCACCAGGTGTCCCTTCACTaGGGTCACCTCCATGGTGAGAAGGCACAGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKTICVHQVSLH*GHLHGEKAQGA Trigger: TGCCCCCTGTGCCTTCTCACCATGGAGGTGACCTCAGTGAAGGGACACCTGGTGGACACAGATTGTCTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | TCCTTGAAGACCACAGCTAGGAGGTGCACAGGGAGCTaGTTCAGATTCACGGAGACCCCACAGTTAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLKTTARRCTGS*FRFTETPQLSP Trigger: GGGGCTTAACTGTGGGGTCTCCGTGAATCTGAAGCAGCTCCCTGTGCACCTCCTAGCTGTGGTCTTCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 90 bp | TCCTGGGACAGAGTGAAGCTGTCCTCACTCCTTGCTAGCTTTTGCTaGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGTGACATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWDRVKLSSLLASFC*DVGPTRHSREGDML Trigger: CAACATGTCACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 90 bp | GATGGTGGGCTTCCTGGTTTCCTCATATCCACTAACTGGAACGTGTaGTCGACTGAGAGGGCCCAGGTGCCAGACAAGCTGAAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGGLPGFLISTNWNV*STERAQVPDKLKPR Trigger: TCTGGGCTTCAGCTTGTCTGGCACCTGGGCCCTCTCAGTCGACAACACGTTCCAGTTAGTGGATATGAGGAAACCAGGAAGCCCACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | CATCGCCTTCAGAACAGGAGGCGTCCTGGGACAGAGTaGAGCTGTCCTCACTCCTTGCTAGCTTTTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRLQNRRRPGTE*SCPHSLLAFAW Trigger: CCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | AGGCTGCGCCACTTGTGGGCTCCACATCTGGGTCATTaGTGTCATAGGCCGAGTCATTCTGCAGAGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RLRHLWAPHLGH*CHRPSHSAELT Trigger: TGTCAACTCTGCAGAATGACTCGGCCTATGACAGCAATGACCCAGATGTGGAGCCCACAAGTGGCGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | GACAGAGTGAAGCTGTCCTCACTCCTTGCTAGCTTTTaGTTGGATGTTGGGCCCACGAGGCACTCTCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DRVKLSSLLASF*LDVGPTRHSRE Trigger: CTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 72 bp | TTGTTCAGGTCCTTCTGGGCCTGGAAGGACAGGCTCTaGTCGTTCTTCAGAGTGAGCATGTTAGGCCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: LFRSFWAWKDRL*SFFRVSMLGPM Trigger: CATCGGGCCTAACATGCTCACTCTGAAGAACGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 72 bp | TCTTCAGCTTCATCGCCTTCAGAACAGGAGGCGTCCTaGGACAGAGTGAAGCTGTCCTCACTCCTTGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSASSPSEQEAS*DRVKLSSLLAS Trigger: GCTAGCAAGGAGTGAGGACAGCTTCACTCTGTCCCAGGACGCCTCCTGTTCTGAAGGCGATGAAGCTGAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | AGAGTGAAGCTGTCCTCACTCCTTGCTAGCTTTTGCTaGGATGTTGGGCCCACGAGGCACTCTCGTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RVKLSSLLASFC*DVGPTRHSREG Trigger: ACCCTCACGAGAGTGCCTCGTGGGCCCAACATCCAAGCAAAAGCTAGCAAGGAGTGAGGACAGCTTCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | GGATGGGTCTGGGAAGTGTGTCGTTCTCCCCACAGATaGTCGACAAGGGTTGGTCAAACAGCGACACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GWVWEVCRSPHR*STRVGQTATLS Trigger: TGAAAGTGTCGCTGTTTGACCAACCCTTGTCGATCATCTGTGGGGAGAACGACACACTTCCCAGACCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | CTGAACTGTCAGTGTGTTCCAGGGAGTCGTCAGAAGTaGTGCGGGAACGCGTCCGAATGTTCTCCCCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LNCQCVPGSRQK*CGNASECSPQI Trigger: TATTTGGGGAGAACATTCGGACGCGTTCCCGCATCACTTCTGACGACTCCCTGGAACACACTGACAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | GACCCAATGCTGGAGGTTCGGGGCAGCACTTTCTTGTaGGACGCAAAGGAAAACGACATGGAGTGCTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: DPMLEVRGSTFL*DAKENDMECFL Trigger: TAGAAAGCACTCCATGTCGTTTTCCTTTGCGTCTCACAAGAAAGTGCTGCCCCGAACCTCCAGCATTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | ACTCCCAACTGTCTGGCCACCGTAGGCTGTGAGTCCTaGTGTCTGGTAATAAATGGCCTCTTCGTAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: TPNCLATVGCES*CLVINGLFVRW Trigger: CCATCTTACGAAGAGGCCATTTATTACCAGACATCAGGACTCACAGCCTACGGTGGCCAGACAGTTGGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | ACCTCATACTCCCAACTGTCTGGCCACCGTAGGCTGTaGGTCCTGATGTCTGGTAATAAATGGCCTCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TSYSQLSGHRRL*VLMSGNKWPLR Trigger: ACGAAGAGGCCATTTATTACCAGACATCAGGACTCACAGCCTACGGTGGCCAGACAGTTGGGAGTATGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | CCCAAAGATTCGCCTGGGGAGGATCTGGAGAAAGCTTaGGTTATGTGTCCCTGTGGAGATGCTAAACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKDSPGEDLEKA*VMCPCGDAKPW Trigger: CCAAGGTTTAGCATCTCCACAGGGACACATAACCAAAGCTTTCTCCAGATCCTCCCCAGGCGAATCTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | TTTCTCGCTGGCAGCTTTCCTGAATATCCCTTCCGTTaGAGGACCTTTAAGGCAGAGGATGGTGAGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLAGSFPEYPFR*RTFKAEDGEDV Trigger: GACATCCTCACCATCCTCTGCCTTAAAGGTCCTTCAACGGAAGGGATATTCAGGAAAGCTGCCAGCGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CCA 72 bp | TCCACCAAGATCTTAACCTTATTGTTCAGGTCCTTCTaGGCCTGGAAGGACAGGCTCTGGTCGTTCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: STKILTLLFRSF*AWKDRLWSFFR Trigger: TCTGAAGAACGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAATAAGGTTAAGATCTTGGTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | CTCAAGTCCTTCTGGAGTTGGTCTCTAGAAAAGTCTTaGGATTTCTCAGACCCAATGCTGGAGGTTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKSFWSWSLEKS*DFSDPMLEVRG Trigger: GCCCCGAACCTCCAGCATTGGGTCTGAGAAATCCAAAGACTTTTCTAGAGACCAACTCCAGAAGGACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | TTTCAAATCCACAGGTCTCTTGGGTTTGCTGTCCACTaGTGGGAAGACTTCCTCTGTAAAGGGATCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FQIHRSLGFAVH*WEDFLCKGIFS Trigger: GCTGAAGATCCCTTTACAGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | TTGTCGATGAGGAATTCCACCAAGATCTTAACCTTATaGTTCAGGTCCTTCTGGGCCTGGAAGGACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSMRNSTKILTL*FRSFWAWKDRL Trigger: GAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAATAAGGTTAAGATCTTGGTGGAATTCCTCATCGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS GCA 72 bp | GGCTTTGGATTTCTGACTCATTTTCCTGGACGATTCTaGCAGAAAGTTGGCTCTCTTTCCTCAAGTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFGFLTHFPGRF*QKVGSLSSSPS Trigger: AGAAGGACTTGAGGAAAGAGAGCCAACTTTCTGGCAGAATCGTCCAGGAAAATGAGTCAGAAATCCAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS CAA 72 bp | TGGGTCCAATTCTTTATTTTCAAATCCACAGGTCTCTaGGGTTTGCTGTCCACTGCTGGGAAGACTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WVQFFIFKSTGL*GLLSTAGKTSS Trigger: AGAGGAAGTCTTCCCAGCAGTGGACAGCAAACCCAAGAGACCTGTGGATTTGAAAATAAAGAATTGGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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| CDS TCA 72 bp | GTCAGCAGGGGAGGCACTTTGATATCACCCTCTGACTaGCATTCAATTAATGTCTCCATGTTGTTAGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: VSRGGTLISPSD*HSINVSMLLAL Trigger: TAATGCTAACAACATGGAGACATTAATTGAATGTCAGTCAGAGGGTGATATCAAAGTGCCTCCCCTGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036370.8 |
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