Pregenerated sensors for TAFA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055865Ensembl transcript IDs: ENSMUST00000139783.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTGCGCTCAGGTTTCCATGGTACAGAGGGTGAGCCAAGAGGCTaGGAGGCCATCCCAGGCCTTCGACGTCCCCTGGGAAGGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: ALRSGFHGTEGEPRG*EAIPGLRRPLGRVT Trigger: TGTGACCCTTCCCAGGGGACGTCGAAGGCCTGGGATGGCCTCCCAGCCTCTTGGCTCACCCTCTGTACCATGGAAACCTGAGCGCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR GCA 90 bp | GTGATTCTGACTGAGGTCCTGTCCATCCATGGACAGCATGGGATGTaGGCCCCGCCCTGCCTCTGCAGAGGTGTGCGGAAGAAGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: VILTEVLSIHGQHGM*APPCLCRGVRKKPF Trigger: GAAGGGCTTCTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCCATGGATGGACAGGACCTCAGTCAGAATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR GCA 90 bp | GAGGTCCTGTCCATCCATGGACAGCATGGGATGTGCGCCCCGCCCTaGCTCTGCAGAGGTGTGCGGAAGAAGCCCTTCATCTCTACTTTC | + |
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Preference number: 1 (lower is better) Translates to: EVLSIHGQHGMCAPP*LCRGVRKKPFISTF Trigger: GAAAGTAGAGATGAAGGGCTTCTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCCATGGATGGACAGGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR GCA 90 bp | ATGGACAGCATGGGATGTGCGCCCCGCCCTGCCTCTGCAGAGGTGTaGGGAAGAAGCCCTTCATCTCTACTTTCCAGTGCTGTCCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: MDSMGCAPRPASAEV*GRSPSSLLSSAVQK Trigger: CTTTTGGACAGCACTGGAAAGTAGAGATGAAGGGCTTCTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR TCA 90 bp | AGGCCATCCCAGGCCTTCGACGTCCCCTGGGAAGGGTCACAGACCTaGCATGGGCAACAATGTGTTCCTTCCCTCCCTAGAGCTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: RPSQAFDVPWEGSQT*HGQQCVPSLPRAKD Trigger: ATCTTTAGCTCTAGGGAGGGAAGGAACACATTGTTGCCCATGTCAGGTCTGTGACCCTTCCCAGGGGACGTCGAAGGCCTGGGATGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CCA 90 bp | CAGAGTGCTGCCCAGGGCCCTGGCCGGTCTATGTTACACTTGACATaGGCACATGTCCAGGTAAGTCCTCTTATCTGCTGTCTGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: QSAAQGPGRSMLHLT*AHVQVSPLICCLVT Trigger: GGTCACCAGACAGCAGATAAGAGGACTTACCTGGACATGTGCCCATGTCAAGTGTAACATAGACCGGCCAGGGCCCTGGGCAGCACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR TCA 90 bp | ACCTGGGATATAGGCATGCACCCCCACACCCAGTTTGCCAAGGACTaGCAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: TWDIGMHPHTQFAKD*QHSMLPPQERTGTS Trigger: ACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTCAGTCCTTGGCAAACTGGGTGTGGGGGTGCATGCCTATATCCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR GCA 90 bp | TCTCTGTTAGGTCCAGCCTGGCCTCCATCTTGCCATCCTCCTTATTaGTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCAG | + |
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Preference number: 1 (lower is better) Translates to: SLLGPAWPPSCHPPY*FLSTWDIGMHPHTQ Trigger: CTGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACCTAACAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR TCA 90 bp | GCACAGGTCTCTCAAGTGTGTGGCCAAAGATCCAAGCATTTTAGCTaGACAGAGTGCTGCCCAGGGCCCTGGCCGGTCTATGTTACACTT | + |
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Preference number: 1 (lower is better) Translates to: AQVSQVCGQRSKHFS*TECCPGPWPVYVTL Trigger: AAGTGTAACATAGACCGGCCAGGGCCCTGGGCAGCACTCTGTTCAGCTAAAATGCTTGGATCTTTGGCCACACACTTGAGAGACCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR GCA 90 bp | CCTCTTTTGACAGGGTCTCTGTTAGGTCCAGCCTGGCCTCCATCTTaGCATCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: PLLTGSLLGPAWPPS*HPPYCFLSTWDIGM Trigger: CATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACCTAACAGAGACCCTGTCAAAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CCA 90 bp | GGGACACAGGCAAGGAGAAGGGCACCAAGATTCCAGTGTAAACTATaGCTGATTTACCTTCTCAGGGAACCATCATCCAGGCTGGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GTQARRRAPRFQCKL*LIYLLREPSSRLVS Trigger: AGAGACCAGCCTGGATGATGGTTCCCTGAGAAGGTAAATCAGCCATAGTTTACACTGGAATCTTGGTGCCCTTCTCCTTGCCTGTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR TCA 90 bp | TCTCCTTCGTGTGGCATTTGTCCTGTTCGGTTTGACTCTGTAGTTTaGAATTCTGGGCATCCACCCCTCCCCTTCTTGCTTCCCTATGTG | + |
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Preference number: 1 (lower is better) Translates to: SPSCGICPVRFDSVV*NSGHPPLPFLLPYV Trigger: CACATAGGGAAGCAAGAAGGGGAGGGGTGGATGCCCAGAATTTCAAACTACAGAGTCAAACCGAACAGGACAAATGCCACACGAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CCA 90 bp | GTTATTGTTGTTCCTCTTTTGACAGGGTCTCTGTTAGGTCCAGCCTaGCCTCCATCTTGCCATCCTCCTTATTGCTTCCTGAGTACCTGG | + |
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Preference number: 1 (lower is better) Translates to: VIVVPLLTGSLLGPA*PPSCHPPYCFLSTW Trigger: CCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACCTAACAGAGACCCTGTCAAAAGAGGAACAACAATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR TCA 90 bp | CTCTGGGGTACAATGGGATGTACAATAGTGGAAAGAACTCTATGCTaGGTCACTGAGCAAGGACATGCCACCAGCTTGCTGTGTGACTTC | + |
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Preference number: 1 (lower is better) Translates to: LWGTMGCTIVERTLC*VTEQGHATSLLCDF Trigger: GAAGTCACACAGCAAGCTGGTGGCATGTCCTTGCTCAGTGACTCAGCATAGAGTTCTTTCCACTATTGTACATCCCATTGTACCCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CCA 90 bp | CTTCGGGCAAATTACTTAACCTTTCTGAGCTACCCTCTCCCAGGCTaGCAAATCAAAGAGCTGGCTTCTAAACCCTCTTGCAACTATAAT | + |
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Preference number: 1 (lower is better) Translates to: LRANYLTFLSYPLPG*QIKELASKPSCNYN Trigger: ATTATAGTTGCAAGAGGGTTTAGAAGCCAGCTCTTTGATTTGCCAGCCTGGGAGAGGGTAGCTCAGAAAGGTTAAGTAATTTGCCCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CCA 90 bp | TTTGTTTGTTTGATGGGAGATCAGTGGCCTCAACCAAAATTCCAGTaGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: FVCLMGDQWPQPKFQ*SKSHLPRIMLVLSR Trigger: TCTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTTGGTTGAGGCCACTGATCTCCCATCAAACAAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 90 bp | GTTCGTGTGGACAACACAGGTGGGGCACGGCAGGGGAGCCGACCGTaGGGTGACAGTGTCCAGGACAGAGTGAGCAGAGAGTCTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: VRVDNTGGARQGSRP*GDSVQDRVSRESME Trigger: CTCCATAGACTCTCTGCTCACTCTGTCCTGGACACTGTCACCCAACGGTCGGCTCCCCTGCCGTGCCCCACCTGTGTTGTCCACACGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCTTGGCCTTGGGGGACTaGGAAGGAGCTCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: IPNCSHCFCCRWAERPLGLALGD*EGAPLC Trigger: GCAGAGTGGAGCTCCTTCTCAGTCCCCCAAGGCCAA...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCGGGCCTGTTTGGCCTTaGGGGACTGAGAAGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IPNCSHCFCCRWAERPLGGPVWP*GTEKEL Trigger: GAGCTCCTTCTCAGTCCCCCAAGGCCAAACAGGCCC...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCTGCTGCCCAGGGCCCTaGCCGGTCTATGTTACACTT | + |
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Preference number: 2 (lower is better) Translates to: IPNCSHCFCCRWAERPLGCCPGP*PVYVTL Trigger: AAGTGTAACATAGACCGGCCAGGGCCCTGGGCAGCA...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATATGTGCGCCCCGCCCTaGCTCTGCAGAGGTGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: PCSPSKFSSALGYNGMYNMCAPP*LCRGVR Trigger: CCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACAT...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 90 bp | GCTGAACAGAGTGCTGCCCAGGGCCCTGGCCGGTCTATGTTACACTaGACATGGGCACATGTCCAGGTAAGTCCTCTTATCTGCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: AEQSAAQGPGRSMLH*TWAHVQVSPLICCL Trigger: CAGACAGCAGATAAGAGGACTTACCTGGACATGTGCCCATGTCAAGTGTAACATAGACCGGCCAGGGCCCTGGGCAGCACTCTGTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 90 bp | GTCTCTGTTAGGTCCAGCCTGGCCTCCATCTTGCCATCCTCCTTATaGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: VSVRSSLASILPSSL*LPEYLGYRHAPPHP Trigger: TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACCTAACAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCACTGGGGATGCAGGTTTaGTGGGAAGGCCAAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPLGMQV*WEGQDG Trigger: CCCATCTTGGCCTTCCCATCAAACCTGCATCCCCAG...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTACTCCCAAGCCATCTAGGAGGCCAGCCTGGTTATGAAGTCCTCTGGAGGGGTGATTCTGACTaGGGTCCTGTCCATCCATGG | + |
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Preference number: 2 (lower is better) Translates to: SLLLPSHLGGQPGYEVLWRGDSD*GPVHPW Trigger: CCATGGATGGACAGGACCTCAGTCAGAATCACCCCT...CCAGAGGACTTCATAACCAGGCTGGCCTCCTAGATGGCTTGGGAGTAGCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAACTTTAGTGGGGGTCAGAGAAGGTACAGAATCAGGACCCCGAGGCAGCGGCCATCTCATCCTCTGTaGCTCGGTTTCCTCGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SNFSGGQRRYRIRTPRQRPSHPL*LGFLVL Trigger: AAGGACGAGGAAACCGAGTCACAGAGGATGAGATGG...CCGCTGCCTCGGGGTCCTGATTCTGTACCTTCTCTGACCCCCACTAAAGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATGCATGGCTAGGGGACAGCATGGGATGTaGGCCCCGCCCTGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSTDTHSAQSSPTKCMARGQHGM*APPCLC Trigger: GCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCC...CCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGTAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTCCTAACTGCTCACACTaGTTCTGCTGCCGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QHSMLPPQERTGTSSPSCPNCSH*FCCRWA Trigger: AGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGG...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCAGAGATCCCACTGGCTTaGCACCAGGGGGCAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPEIPLA*HQGAVF Trigger: AAACACTGCCCCCTGGTGCCAAGCCAGTGGGATCTC...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAACTTTAGTGGGGGTCAGAGAAGGTACAGAATCAGGACCCCGAGGCAGCGGGTAAGTCCTCTTATCTaGTGTCTGGTGACCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SNFSGGQRRYRIRTPRQRVSPLI*CLVTRP Trigger: AGGCCTGGTCACCAGACAGCAGATAAGAGGACTTAC...CCGCTGCCTCGGGGTCCTGATTCTGTACCTTCTCTGACCCCCACTAAAGTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | CTGATTTACCTTCTCAGGGAACCATCATCCAGGCTGGTCTCTAACACTCACTCTCCCCACCACACCCACTaGAGGTCGCTCAGAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LIYLLREPSSRLVSNTHSPHHTH*RSLRSH Trigger: GTGGCTTCTGAGCGACCTGCAGTGGGTGTGGTGGGG...AGAGTGAGTGTTAGAGACCAGCCTGGATGATGGTTCCCTGAGAAGGTAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTGCTACAAGCAGAGACTaGCAGAGGCCTGCCTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QHSMLPPQERTGTSSPSCATSRD*QRPAFE Trigger: TTCAAAGGCAGGCCTCTGTCAGTCTCTGCTTGTAGC...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATTCTGGCCTGCCCCTCTaGCTCCTGGCAGGTACCTAT | + |
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Preference number: 2 (lower is better) Translates to: PCSPSKFSSALGYNGMYNSGLPL*LLAGTY Trigger: ATAGGTACCTGCCAGGAGGCAGAGGGGCAGGCCAGA...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTTTATCTGCTGTCTGGTaGCCAGGCCTTTCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QHSMLPPQERTGTSSPSCLSAVW*PGLSSV Trigger: GACTGAAGAAAGGCCTGGTCACCAGACAGCAGATAA...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATCAAAAGAGATCCCACTaGCTTGGCACCAGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PCSPSKFSSALGYNGMYNQKRSH*LGTRGQ Trigger: CTGCCCCCTGGTGCCAAGCCAGTGGGATCTCTTTTG...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCACACCAGCTTGCTGTGTaGCTTCGGGCAAATTACTTA | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPHQLAV*LRANYL Trigger: TAAGTAATTTGCCCGAAGTCACACAGCAAGCTGGTG...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGCTACTCCCAAGCCATCTAGGAGGCCAGCCTGGTTATGAAGTCCTCTGGCAACCAAAATTCCAGTaGTCAAAGTCCCATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLLLPSHLGGQPGYEVLWQPKFQ*SKSHLP Trigger: TGGGAGATGGGACTTTGACCACTGGAATTTTGGTTG...CCAGAGGACTTCATAACCAGGCTGGCCTCCTAGATGGCTTGGGAGTAGCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCATGTAGTTTGAAATTCTaGGCATCCACCCCTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPCSLKF*ASTPPL Trigger: AAGGGGAGGGGTGGATGCCCAGAATTTCAAACTACA...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 90 bp | ATGGGAAGGCCAAGATGGGAAGATACTGGTGTGGCCCTCATAACTTaGTGTCCTGGGATCGGGTGGCTGAAGATCTGTGTAAATTCCATC | + |
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Preference number: 2 (lower is better) Translates to: MGRPRWEDTGVALIT*CPGIGWLKICVNSI Trigger: GATGGAATTTACACAGATCTTCAGCCACCCGATCCCAGGACACAAAGTTATGAGGGCCACACCAGTATCTTCCCATCTTGGCCTTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCCAGAGCTTTTTGTGTGGGGCTTCCCTGGAAATCTACAGATACCCACTCGGTCTATGTTACACTTaGCATGGGCACATGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LCQSFLCGASLEIYRYPLGLCYT*HGHMSR Trigger: CCTGGACATGTGCCCATGTCAAGTGTAACATAGACC...GAGTGGGTATCTGTAGATTTCCAGGGAAGCCCCACACAAAAAGCTCTGGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCAACAGAGGCCTGCCTTTaGAAGATAACGTTACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPTEACL*KITLLF Trigger: GAACAGTAACGTTATCTTTCAAAGGCAGGCCTCTGT...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCATCACACATCTCTCTCTaGGCATCAGGAGGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPSHISL*ASGGKQ Trigger: TTGTTTTCCTCCTGATGCTCAGAGAGAGATGTGTGA...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | GACAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGGCAAATCAAAGAGCTaGCTTCTAAACCCTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: DNTPCCLLRKGQAPVLLRGKSKS*LLNPLA Trigger: TGCAAGAGGGTTTAGAAGCCAGCTCTTTGATTTGCC...ACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCTACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATGCATGGCTAGGGTGACGCGTCATCTCTaGACTCTCCACTCTAACCCA | + |
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Preference number: 2 (lower is better) Translates to: KSTDTHSAQSSPTKCMARVTRHL*TLHSNP Trigger: TGGGTTAGAGTGGAGAGTTCAGAGATGACGCGTCAC...CCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGTAGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCACTGTTCATCTCATTTTaGCAAACCCAAAACATGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPLFISF*QTQNMP Trigger: GGGCATGTTTTGGGTTTGGCAAAATGAGATGAACAG...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATAGTGGAAAGAACAGGACCTACCTTCTaGCCTCCAGGAAAGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSSHLLWGTMGCTIVERTGPTF*PPGKQA Trigger: AGCCTGCTTTCCTGGAGGCCAGAAGGTAGGTCCTGT...TCTTTCCACTATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 90 bp | GACAGAGGCCTGCCTTTGAAAGATAACGTTACTGTTCATCTCATTTaGCCAAACCCAAAACATGCCCTGAGGTGGGGTGATACCAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: DRGLPLKDNVTVHLI*PNPKHALRWGDTRV Trigger: GACTCTGGTATCACCCCACCTCAGGGCATGTTTTGGGTTTGGCAAAATGAGATGAACAGTAACGTTATCTTTCAAAGGCAGGCCTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGGTCTCTAACACTCACTCTAACACTTAAGGCCTTGGTAATAAAAGTAAGCGCCTCTGCAGAGGTGTaGGGAAGAAGCCCTTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GWSLTLTLTLKALVIKVSASAEV*GRSPSS Trigger: AGATGAAGGGCTTCTTCCGCACACCTCTGCAGAGGC...GCTTACTTTTATTACCAAGGCCTTAAGTGTTAGAGTGAGTGTTAGAGACCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CAA 90 bp | CATCATCCAGGCTGGTCTCTAACACTCACTCTAACACTTAAGGCCTaGGTAATAAAAGTAAGCCAGCTTGCTACTCCCAAGCCATCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: HHPGWSLTLTLTLKA*VIKVSQLATPKPSR Trigger: CCTAGATGGCTTGGGAGTAGCAAGCTGGCTTACTTTTATTACCAAGGCCTTAAGTGTTAGAGTGAGTGTTAGAGACCAGCCTGGATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTGGTCTCTAACACTCACTCTAACACTTAAGGCCTTGGTAATAAAAGTAAGCTCCAAGCATTTTAGCTaGACAGAGTGCTGCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GWSLTLTLTLKALVIKVSSKHFS*TECCPG Trigger: CCCTGGGCAGCACTCTGTTCAGCTAAAATGCTTGGA...GCTTACTTTTATTACCAAGGCCTTAAGTGTTAGAGTGAGTGTTAGAGACCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CCA 90 bp | GATAGAGAAGCAGAGTGGGTGATGGGATACCTAACTGCTCACACTGCTTCTGCTTCCCAAGAATCATGTTaGTGCTATCCAGACAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DREAEWVMGYLTAHTASASQESC*CYPDSV Trigger: AACACTGTCTGGATAGCACCAACATGATTCTTGGGA...AGCAGAAGCAGTGTGAGCAGTTAGGTATCCCATCACCCACTCTGCTTCTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTTACCTTCTCAGGGAACCATCATCCAGGCTGGTCTCTAACACTCACTCTCAAGAATCATGTTGGTaGTATCCAGACAGTGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LIYLLREPSSRLVSNTHSQESCW*YPDSVC Trigger: GCAAACACTGTCTGGATAGCACCAACATGATTCTTG...AGAGTGAGTGTTAGAGACCAGCCTGGATGATGGTTCCCTGAGAAGGTAAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGGGTCTCTCAAGTGTGTaGCCAAAGATCCAAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: KIPVVKVPSPKNHVGAIQGLSSV*PKIQAF Trigger: AAATGCTTGGATCTTTGGCCACACACTTGAGAGACC...CTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATAACACTTTAAACTGTTaGAATTGCCTGTCATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PCSPSKFSSALGYNGMYNNTLNC*NCLSST Trigger: AGTGGATGACAGGCAATTTCAACAGTTTAAAGTGTT...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGATCTCTACTTTCCAGTaGTGTCCAAAAGAGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KIPVVKVPSPKNHVGAIQISTFQ*CPKEIP Trigger: TGGGATCTCTTTTGGACAGCACTGGAAAGTAGAGAT...CTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | CACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTaGGCTGTCACGGGGCCTGTTTGGCCTTGGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: HTASAAAGLSDL*AVTGPVWPWGT Trigger: AGTCCCCCAAGGCCAAACAGGCCCCGTGACAGCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | ACTGAGGTCCTGTCCATCCATGGACAGCATGGGATGTaGGCCCCGCCCTGCCTCTGCAGAGGTGTGCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TEVLSIHGQHGM*APPCLCRGVRK Trigger: CTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCCATGGATGGACAGGACCTCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | GCCAGCCTGGTTATGAAGTCCTCTGGCCTGCCCCTCTaGCTCCTGGCAGGTACCTATGTAGGGGGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASLVMKSSGLPL*LLAGTYVGGWL Trigger: CAGCCAGCCCCCTACATAGGTACCTGCCAGGAGGCAGAGGGGCAGGCCAGAGGACTTCATAACCAGGCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | CACAGGTGGGGCACGGCAGGGGAGCCGACCGTTGGGTaGCAGTGTCCAGGACAGAGTGAGCAGAGAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: HRWGTAGEPTVG*QCPGQSEQRVY Trigger: ATAGACTCTCTGCTCACTCTGTCCTGGACACTGTCACCCAACGGTCGGCTCCCCTGCCGTGCCCCACCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | TCCATCCATGGACAGCATGGGATGTGCGCCCCGCCCTaGCTCTGCAGAGGTGTGCGGAAGAAGCCCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SIHGQHGMCAPP*LCRGVRKKPFI Trigger: GATGAAGGGCTTCTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCATGCTGTCCATGGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | AGCGACCTCTGGGCTGTCACGGGGCCTGTTTGGCCTTaGGGGACTGAGAAGGAGCTCCACTCTGCTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SDLWAVTGPVWP*GTEKELHSAVC Trigger: ACACACAGCAGAGTGGAGCTCCTTCTCAGTCCCCCAAGGCCAAACAGGCCCCGTGACAGCCCAGAGGTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | TCAGGTTTCCATGGTACAGAGGGTGAGCCAAGAGGCTaGGAGGCCATCCCAGGCCTTCGACGTCCCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGFHGTEGEPRG*EAIPGLRRPLG Trigger: TCCCAGGGGACGTCGAAGGCCTGGGATGGCCTCCCAGCCTCTTGGCTCACCCTCTGTACCATGGAAACCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | CTGGGCTGTCACGGGGCCTGTTTGGCCTTGGGGGACTaGGAAGGAGCTCCACTCTGCTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGCHGACLALGD*EGAPLCCVCVC Trigger: ACACACACACACACAGCAGAGTGGAGCTCCTTCTCAGTCCCCCAAGGCCAAACAGGCCCCGTGACAGCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | GTGGGTGATGGGATACCTAACTGCTCACACTGCTTCTaGTGCCGCTGGGCTGAGCGACCTCTGGGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VGDGIPNCSHCF*CRWAERPLGCH Trigger: GTGACAGCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTATCCCATCACCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | GGGAGCTGGAGGAGACTGGCAGCTCTCGGGAGCTTGTaGCGCGTCATCTCTGAACTCTCCACTCTAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSWRRLAALGSL*RVISELSTLTQ Trigger: CTGGGTTAGAGTGGAGAGTTCAGAGATGACGCGTCACAAGCTCCCGAGAGCTGCCAGTCTCCTCCAGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | ATGGGATGTGCGCCCCGCCCTGCCTCTGCAGAGGTGTaGGGAAGAAGCCCTTCATCTCTACTTTCCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MGCAPRPASAEV*GRSPSSLLSSA Trigger: AGCACTGGAAAGTAGAGATGAAGGGCTTCTTCCGCACACCTCTGCAGAGGCAGGGCGGGGCGCACATCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | TATGGAGCTCCACACCCACCGACAGGACCTACCTTCTaGCCTCCAGGAAAGCAGGCTTTCACTGTCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YGAPHPPTGPTF*PPGKQAFTVWL Trigger: GAGCCAGACAGTGAAAGCCTGCTTTCCTGGAGGCCAGAAGGTAGGTCCTGTCGGTGGGTGTGGAGCTCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | CCACTCCTCAGTACTGAAGGAGACCATGACTGCCATTaGCCCTTGGTGACCCTGGCCTGTCACCGTGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PLLSTEGDHDCH*PLVTLACHRAT Trigger: TGTAGCACGGTGACAGGCCAGGGTCACCAAGGGTCAATGGCAGTCATGGTCTCCTTCAGTACTGAGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | GGTCCAGCCTGGCCTCCATCTTGCCATCCTCCTTATTaGTTCCTGAGTACCTGGGATATAGGCATGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: GPAWPPSCHPPY*FLSTWDIGMHP Trigger: GGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | GCCCAGGGCCCTGGCCGGTCTATGTTACACTTGACATaGGCACATGTCCAGGTAAGTCCTCTTATCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AQGPGRSMLHLT*AHVQVSPLICC Trigger: ACAGCAGATAAGAGGACTTACCTGGACATGTGCCCATGTCAAGTGTAACATAGACCGGCCAGGGCCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | GGTGTGGCCCTCATAACTTTGTGTCCTGGGATCGGGTaGCTGAAGATCTGTGTAAATTCCATCCGCCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GVALITLCPGIG*LKICVNSIRPT Trigger: GGTGGGGCGGATGGAATTTACACAGATCTTCAGCCACCCGATCCCAGGACACAAAGTTATGAGGGCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCACCACCCCTCCCCTTCTaGCTTCCCTATGTGTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPPPLPF*LPYVYV Trigger: CACATACACATAGGGAAGCAAGAAGGGGAGGGGTGG...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | ATAGGCATGCACCCCCACACCCAGTTTGCCAAGGACTaGCAACACTCCATGTTGCCTCCTCAGGAAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: IGMHPHTQFAKD*QHSMLPPQERT Trigger: TGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTCAGTCCTTGGCAAACTGGGTGTGGGGGTGCATGCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | TTGACATGGGCACATGTCCAGGTAAGTCCTCTTATCTaGTGTCTGGTGACCAGGCCTTTCTTCAGTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTWAHVQVSPLI*CLVTRPFFSPE Trigger: CTCGGGACTGAAGAAAGGCCTGGTCACCAGACAGCAGATAAGAGGACTTACCTGGACATGTGCCCATGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | ACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATaGATGGCTAGGTCAGGAGGCAGGGAGGGAGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: TDTHSAQSSPTK*MARSGGREGDL Trigger: TAAGTCTCCCTCCCTGCCTCCTGACCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | ACACCCAGTTTGCCAAGGACTGACAACACTCCATGTTaGCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPSLPRTDNTPC*LLRKGQAPVLL Trigger: AAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTCAGTCCTTGGCAAACTGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | TGCAGGTTTGATGGGAAGGCCAAGATGGGAAGATACTaGTGTGGCCCTCATAACTTTGTGTCCTGGGATCGG | + |
|
Preference number: 3 (lower is better) Translates to: CRFDGKAKMGRY*CGPHNFVSWDR Trigger: CCGATCCCAGGACACAAAGTTATGAGGGCCACACCAGTATCTTCCCATCTTGGCCTTCCCATCAAACCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCTCCTTAAGGATAGGTTaGTGTGTTGACTTTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IPNCSHCFCCRWAERPLGSLRIG*CVDFVH Trigger: ATGAACAAAGTCAACACACAAACCTATCCTTAAGGA...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | CTCTCACATCTTAGCATCTTGCTGGGGATGCAGGTTTaGTGGGAAGGCCAAGATGGGAAGATACTGGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSHLSILLGMQV*WEGQDGKILVW Trigger: CCACACCAGTATCTTCCCATCTTGGCCTTCCCATCAAACCTGCATCCCCAGCAAGATGCTAAGATGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | CTTGCTGGGGATGCAGGTTTGATGGGAAGGCCAAGATaGGAAGATACTGGTGTGGCCCTCATAACTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LAGDAGLMGRPR*EDTGVALITLC Trigger: ACACAAAGTTATGAGGGCCACACCAGTATCTTCCCATCTTGGCCTTCCCATCAAACCTGCATCCCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | CACTGTCTAGATAAAACTGCCACGGAAGGCCTAGGCTaGAGTCCTAACATCCGTGTTTTTGGAAGGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HCLDKTATEGLG*SPNIRVFGRPS Trigger: GCTTGGCCTTCCAAAAACACGGATGTTAGGACTCCAGCCTAGGCCTTCCGTGGCAGTTTTATCTAGACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | TCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTaGTGCTATCCAGACAGTGTTTGCGGGGTCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSGQSPISQESC*CYPDSVCGVSL Trigger: CAGTGAGACCCCGCAAACACTGTCTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | GGAGAAGGGCACCAAGATTCCAGTGTAAACTATGGCTaGTTTACCTTCTCAGGGAACCATCATCCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEGHQDSSVNYG*FTFSGNHHPGW Trigger: CCAGCCTGGATGATGGTTCCCTGAGAAGGTAAATCAGCCATAGTTTACACTGGAATCTTGGTGCCCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | AGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTaGTATCCAGACAGTGTTTGCGGGGTCTCACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGQSPISQESCW*YPDSVCGVSLS Trigger: AGACAGTGAGACCCCGCAAACACTGTCTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | CCTCCAGGAAAGCAGGCTTTCACTGTCTGGCTCTGCTaGAGCCGTAACCTAAATAATTCACTCACACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PPGKQAFTVWLC*SRNLNNSLTHL Trigger: GAGATGTGTGAGTGAATTATTTAGGTTACGGCTTCAGCAGAGCCAGACAGTGAAAGCCTGCTTTCCTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | TGTGGCATTTGTCCTGTTCGGTTTGACTCTGTAGTTTaGAATTCTGGGCATCCACCCCTCCCCTTCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CGICPVRFDSVV*NSGHPPLPFLL Trigger: AAGCAAGAAGGGGAGGGGTGGATGCCCAGAATTTCAAACTACAGAGTCAAACCGAACAGGACAAATGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | GCAAGGAGAAGGGCACCAAGATTCCAGTGTAAACTATaGCTGATTTACCTTCTCAGGGAACCATCATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARRRAPRFQCKL*LIYLLREPSSR Trigger: CCTGGATGATGGTTCCCTGAGAAGGTAAATCAGCCATAGTTTACACTGGAATCTTGGTGCCCTTCTCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR TCA 72 bp | ACAATGGGATGTACAATAGTGGAAAGAACTCTATGCTaGGTCACTGAGCAAGGACATGCCACCAGCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TMGCTIVERTLC*VTEQGHATSLL Trigger: CAGCAAGCTGGTGGCATGTCCTTGCTCAGTGACTCAGCATAGAGTTCTTTCCACTATTGTACATCCCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR GCA 72 bp | GGCTGGCAAATCAAAGAGCTGGCTTCTAAACCCTCTTaGAACTATAATTCTGGGTTTAGGGAGCTGTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GWQIKELASKPS*NYNSGFRELSS Trigger: AGACGACAGCTCCCTAAACCCAGAATTATAGTTGCAAGAGGGTTTAGAAGCCAGCTCTTTGATTTGCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | TTGATGGGAGATCAGTGGCCTCAACCAAAATTCCAGTaGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LMGDQWPQPKFQ*SKSHLPRIMLV Trigger: CACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTTGGTTGAGGCCACTGATCTCCCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | CATCTCATTTTGCCAAACCCAAAACATGCCCTGAGGTaGGGTGATACCAGAGTCTTAGTCAAATGCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLILPNPKHALR*GDTRVLVKCIG Trigger: CCCAATGCATTTGACTAAGACTCTGGTATCACCCCACCTCAGGGCATGTTTTGGGTTTGGCAAAATGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | AATTACTTAACCTTTCTGAGCTACCCTCTCCCAGGCTaGCAAATCAAAGAGCTGGCTTCTAAACCCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NYLTFLSYPLPG*QIKELASKPSC Trigger: GCAAGAGGGTTTAGAAGCCAGCTCTTTGATTTGCCAGCCTGGGAGAGGGTAGCTCAGAAAGGTTAAGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CCA 72 bp | AAGAACCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTaGGGTACAATGGGATGTACAATAGTGGAAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: KNPVLLPSSHLL*GTMGCTIVERT Trigger: AGTTCTTTCCACTATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATTTTAAACTGTTGAAATaGCCTGTCATCCACTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PCSPSKFSSALGYNGMYNFKLLK*PVIHSL Trigger: TAAGGAGTGGATGACAGGCAATTTCAACAGTTTAAA...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTTCTCCTTCCAAGTTCTCATCTGCTCTGGGGTACAATGGGATGTACAATAAACACTTTAAACTGTaGAAATTGCCTGTCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PCSPSKFSSALGYNGMYNKHFKL*KLPVIH Trigger: GTGGATGACAGGCAATTTCAACAGTTTAAAGTGTTT...ATTGTACATCCCATTGTACCCCAGAGCAGATGAGAACTTGGAAGGAGAACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| 3UTR CAA 72 bp | GACAACACAGGTGGGGCACGGCAGGGGAGCCGACCGTaGGGTGACAGTGTCCAGGACAGAGTGAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNTGGARQGSRP*GDSVQDRVSRE Trigger: CTCTCTGCTCACTCTGTCCTGGACACTGTCACCCAACGGTCGGCTCCCCTGCCGTGCCCCACCTGTGTTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
||
| CDS-3UTR GCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCAAGCACCCAGCTGCCTaGGCTCCAGTTGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPNCSHCFCCRWAERPLGKHPAA*APVAGG Trigger: CCCACCAGCAACTGGAGCGCAGGCAGCTGGGTGCTT...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCGGGAGCGCTCCTCAATaGGGTTCCGGTTGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IPNCSHCFCCRWAERPLGGSAPQ*GSGCSS Trigger: GCTGCTGCAACCGGAACCGCATTGAGGAGCGCTCCC...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CCA 90 bp | ATACCTAACTGCTCACACTGCTTCTGCTGCCGCTGGGCTGAGCGACCTCTGGGCAGGAGGGCTTTGCTCTaGTGGTGCCAGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IPNCSHCFCCRWAERPLGRRALL*WCQPPG Trigger: GCCAGGTGGCTGGCACCACCAGAGCAAAGCCCTCCT...GCCCAGAGGTCGCTCAGCCCAGCGGCAGCAGAAGCAGTGTGAGCAGTTAGGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCAGCTGCAGCTCCACCCTaGCAGGTCCGGGAGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPAAAPP*QVREHL Trigger: AAGGTGCTCCCGGACCTGTCAGGGTGGAGCTGCAGC...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | GACAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGCTTTGCTCTGGTGGTaGCAGCCACCTGGCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: DNTPCCLLRKGQAPVLLRALLWW*QPPGRT Trigger: TGTCCGGCCAGGTGGCTGGCACCACCAGAGCAAAGC...ACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTCACGCAGGAGGGCTTTaGTCTGGTGGTGCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QHSMLPPQERTGTSSPSCHAGGL*SGGASH Trigger: GTGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTG...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR TCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTAGGCAGGGCTCCATCTaGCACCACCACTTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QHSMLPPQERTGTSSPSCRQGSI*HHHFCR Trigger: CCTGCAGAAGTGGTGGTGTCAGATGGAGCCCTGCCT...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTACCTCGCAGGTGCCCTaGTTCACTAGGACTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: QHSMLPPQERTGTSSPSCTSQVP*FTRTAD Trigger: ATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGGT...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CCA 90 bp | GACAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGAGCATTTGACCGTCTaGGAGCGCTCCTCAATGCGG | + |
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Preference number: 4 (lower is better) Translates to: DNTPCCLLRKGQAPVLLREHLTV*ERSSMR Trigger: CCGCATTGAGGAGCGCTCCCAGACGGTCAAATGCTC...ACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | AGTGCTGCCCAGGGCCCTGGCCGGTCTATGTTACACTaGACATGGGCACATGTCCAGGTAAGTCCTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: SAAQGPGRSMLH*TWAHVQVSPLI Trigger: GATAAGAGGACTTACCTGGACATGTGCCCATGTCAAGTGTAACATAGACCGGCCAGGGCCCTGGGCAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | AGGTCCAGCCTGGCCTCCATCTTGCCATCCTCCTTATaGCTTCCTGAGTACCTGGGATATAGGCATGCACCC | + |
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Preference number: 4 (lower is better) Translates to: RSSLASILPSSL*LPEYLGYRHAP Trigger: GGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGATGGCAAGATGGAGGCCAGGCTGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTGTTGCAGCAGCGATGTaGAGCAATCACCTCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QHSMLPPQERTGTSSPSCVAAAM*SNHLAG Trigger: ACCTGCGAGGTGATTGCTGCACATCGCTGCTGCAAC...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | CAACACTCCATGTTGCCTCCTCAGGAAAGGACAGGCACCAGTTCTCCTTCGTGTCAATGCGGTTCCGGTTaGAGCAGCGATGTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QHSMLPPQERTGTSSPSCQCGSG*SSDVQQ Trigger: TTGCTGCACATCGCTGCTGCAACCGGAACCGCATTG...ACACGAAGGAGAACTGGTGCCTGTCCTTTCCTGAGGAGGCAACATGGAGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CCA 90 bp | AAATCTACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATGCATGGCTAGGAGGGCTTTGCTCTGGTaGTGCCAGCCACCTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KSTDTHSAQSSPTKCMARRALLW*CQPPGR Trigger: CCGGCCAGGTGGCTGGCACCACCAGAGCAAAGCCCT...CCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGTAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | AAATCTACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATGCATGGCTAGGGTGCAAGCACCCAGCTaGCTGCGCTCCAGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KSTDTHSAQSSPTKCMARVQAPS*LRSSCW Trigger: CCAGCAACTGGAGCGCAGGCAGCTGGGTGCTTGCAC...CCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGTAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCCAGAGCTTTTTGTGTGGGGCTTCCCTGGAAATCTACAGATACCCACTCCAATCACCTCGCAGGTaGCCTGCTTCACTAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LCQSFLCGASLEIYRYPLQSPRR*PASLGL Trigger: CAGTCCTAGTGAAGCAGGGCACCTGCGAGGTGATTG...GAGTGGGTATCTGTAGATTTCCAGGGAAGCCCCACACAAAAAGCTCTGGCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR TCA 90 bp | AAAATTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGACAGGCAGGAGCATTTaGCCGTCTGGGAGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KIPVVKVPSPKNHVGAIQTGRSI*PSGSAP Trigger: AGGAGCGCTCCCAGACGGTCAAATGCTCCTGCCTGT...CTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | AAAATTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGGCGGATGTTGGAGGCTaGAAGGAAGCAGAGGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: KIPVVKVPSPKNHVGAIQADVGG*KEAEAG Trigger: TCCGGCCTCTGCTTCCTTGCAGCCTCCAACATCCGC...CTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | CCAAGATGGGAAGATACTGGTGTGGCCCTCATAACTTaGTGTCCTGGGATCGGGTGGCTGAAGATCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: PRWEDTGVALIT*CPGIGWLKICV Trigger: TACACAGATCTTCAGCCACCCGATCCCAGGACACAAAGTTATGAGGGCCACACCAGTATCTTCCCATCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR GCA 90 bp | AAAATTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTTGGTGCTATCCAGCCTTGTGTCCACTGCTaGAGCTCCACCCTGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: KIPVVKVPSPKNHVGAIQPCVHC*SSTLTG Trigger: ACCTGTCAGGGTGGAGCTGCAGCAGTGGACACAAGG...CTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | TTCCAGTGGTCAAAGTCCCATCTCCCAAGAATCATGTaGGTGCTATCCAGACAGTGTTTGCGGGGTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: FQWSKSHLPRIM*VLSRQCLRGLT Trigger: AGTGAGACCCCGCAAACACTGTCTGGATAGCACCAACATGATTCTTGGGAGATGGGACTTTGACCACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | GGCTGGTCTCTAACACTCACTCTAACACTTAAGGCCTaGGTAATAAAAGTAAGCCAGCTTGCTACTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GWSLTLTLTLKA*VIKVSQLATPK Trigger: CTTGGGAGTAGCAAGCTGGCTTACTTTTATTACCAAGGCCTTAAGTGTTAGAGTGAGTGTTAGAGACCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| 3UTR CAA 72 bp | CTCCTTAACTTGACAAGATATTCCTTAAGGATAGGTTaGTGTGTTGACTTTGTTCATAGGAGAGCACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LLNLTRYSLRIG*CVDFVHRRAQV Trigger: GACCTGTGCTCTCCTATGAACAAAGTCAACACACAAACCTATCCTTAAGGAATATCTTGTCAAGTTAAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 90 bp | CAAGGAAGCAGAGGCCGGACACGTCCACAGCCAGGCGAGGCACAGTaGAAGCACCCAGCTGCCTGCGCTCCAGTTGCTGGTGGGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QGSRGRTRPQPGEAQ*KHPAACAPVAGGPL Trigger: GAGAGGCCCACCAGCAACTGGAGCGCAGGCAGCTGGGTGCTTGCACTGTGCCTCGCCTGGCTGTGGACGTGTCCGGCCTCTGCTTCCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS CCA 90 bp | GAGGCGTCCACGCAGGAGGGCTTTGCTCTGGTGGTGCCAGCCACCTaGCCGGACAGGCAGGAGCATTTGACCGTCTGGGAGCGCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: EASTQEGFALVVPAT*PDRQEHLTVWERSS Trigger: TGAGGAGCGCTCCCAGACGGTCAAATGCTCCTGCCTGTCCGGCCAGGTGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTGGACGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 90 bp | TGCGGTTCCGGTTGCAGCAGCGATGTGCAGCAATCACCTCGCAGGTaGCCTGCTTCACTAGGACTGCGGATGTTGGAGGCTGCAAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CGSGCSSDVQQSPRR*PASLGLRMLEAARK Trigger: CTTCCTTGCAGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGGTGATTGCTGCACATCGCTGCTGCAACCGGAACCGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 90 bp | TTCCGGTTGCAGCAGCGATGTGCAGCAATCACCTCGCAGGTGCCCTaGTTCACTAGGACTGCGGATGTTGGAGGCTGCAAGGAAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FRLQQRCAAITSQVP*FTRTADVGGCKEAE Trigger: CTCTGCTTCCTTGCAGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGGTGATTGCTGCACATCGCTGCTGCAACCGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCTTATTGCTTCCTGAGTACCTGGGATATAGGCATGCACCCCCACACCCACCACGCAGGAGGGCTTaGCTCTGGTGGTGCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SSLLLPEYLGYRHAPPHPPRRRA*LWWCQP Trigger: TGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTGG...TGGGTGTGGGGGTGCATGCCTATATCCCAGGTACTCAGGAAGCAATAAGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CAA 90 bp | GATAGAGAAGCAGAGTGGGTGATGGGATACCTAACTGCTCACACTGCTTCTGCTTCAATGCGGTTCCGGTaGCAGCAGCGATGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: DREAEWVMGYLTAHTASASMRFR*QQRCAA Trigger: TGCTGCACATCGCTGCTGCAACCGGAACCGCATTGA...AGCAGAAGCAGTGTGAGCAGTTAGGTATCCCATCACCCACTCTGCTTCTCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CAA 90 bp | AAATCTACAGATACCCACTCAGCTCAGAGTTCACCCACTAAATGCATGGCTAGGGACAGGCAGGAGCATTaGACCGTCTGGGAGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSTDTHSAQSSPTKCMARDRQEH*TVWERS Trigger: GGAGCGCTCCCAGACGGTCAAATGCTCCTGCCTGTC...CCTAGCCATGCATTTAGTGGGTGAACTCTGAGCTGAGTGGGTATCTGTAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGTCTCTAACACTCACTCTAACACTTAAGGCCTTGGTAATAAAAGTAAGCGTGACCTTGGTGGTTTaGACCTTGTGTCCACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GWSLTLTLTLKALVIKVSVTLVV*TLCPLL Trigger: CAGCAGTGGACACAAGGTCAAAACCACCAAGGTCAC...GCTTACTTTTATTACCAAGGCCTTAAGTGTTAGAGTGAGTGTTAGAGACCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS CCA 72 bp | GGACGATGGAGGCGTCCACGCAGGAGGGCTTTGCTCTaGTGGTGCCAGCCACCTGGCCGGACAGGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRWRRPRRRALL*WCQPPGRTGRS Trigger: GCTCCTGCCTGTCCGGCCAGGTGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTGGACGCCTCCATCGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 72 bp | CTGCAGGACGATGGAGGCGTCCACGCAGGAGGGCTTTaGTCTGGTGGTGCCAGCCACCTGGCCGGACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LQDDGGVHAGGL*SGGASHLAGQA Trigger: TGCCTGTCCGGCCAGGTGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTGGACGCCTCCATCGTCCTGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 72 bp | AGAGGCCGGACACGTCCACAGCCAGGCGAGGCACAGTaGAAGCACCCAGCTGCCTGCGCTCCAGTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RGRTRPQPGEAQ*KHPAACAPVAG Trigger: ACCAGCAACTGGAGCGCAGGCAGCTGGGTGCTTGCACTGTGCCTCGCCTGGCTGTGGACGTGTCCGGCCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS CCA 72 bp | CGATGGAGGCGTCCACGCAGGAGGGCTTTGCTCTGGTaGTGCCAGCCACCTGGCCGGACAGGCAGGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: RWRRPRRRALLW*CQPPGRTGRSI Trigger: AATGCTCCTGCCTGTCCGGCCAGGTGGCTGGCACCACCAGAGCAAAGCCCTCCTGCGTGGACGCCTCCATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS CAA 72 bp | CCTCGCAGGTGCCCTGCTTCACTAGGACTGCGGATGTaGGAGGCTGCAAGGAAGCAGAGGCCGGACACGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRRCPASLGLRM*EAARKQRPDTS Trigger: GGACGTGTCCGGCCTCTGCTTCCTTGCAGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 72 bp | GTGCCCTGCTTCACTAGGACTGCGGATGTTGGAGGCTaGAAGGAAGCAGAGGCCGGACACGTCCACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VPCFTRTADVGG*KEAEAGHVHSQ Trigger: CTGGCTGTGGACGTGTCCGGCCTCTGCTTCCTTGCAGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 72 bp | CAGCAGCGATGTGCAGCAATCACCTCGCAGGTGCCCTaGTTCACTAGGACTGCGGATGTTGGAGGCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QQRCAAITSQVP*FTRTADVGGCK Trigger: CTTGCAGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGGTGATTGCTGCACATCGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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| CDS GCA 72 bp | GGTTGCAGCAGCGATGTGCAGCAATCACCTCGCAGGTaGCCTGCTTCACTAGGACTGCGGATGTTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GCSSDVQQSPRR*PASLGLRMLEA Trigger: AGCCTCCAACATCCGCAGTCCTAGTGAAGCAGGGCACCTGCGAGGTGATTGCTGCACATCGCTGCTGCAACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139783.2 |
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