Pregenerated sensors for TAFA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059187Ensembl transcript IDs: ENSMUST00000075080.6, ENSMUST00000122120.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAGCTTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTaGCATGTTGGATTTTCACATGGGCATGTATCTTCCTTACCGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PQLPGVGLQLAFQGE*HVGFSHGHVSSLPR Trigger: TCTCGGTAAGGAAGATACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 90 bp | TCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCAGCTaGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATGGGCATG | + |
|
Preference number: 1 (lower is better) Translates to: SVLLGCLSFQESACS*PSRESAMLDFHMGM Trigger: CATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR GCA 90 bp | CTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTaGAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATG | + |
|
Preference number: 1 (lower is better) Translates to: LDSVLLGCLSFQESA*SWPSRESAMLDFHM Trigger: CATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 90 bp | TCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTaGATTTTCACATGGGCATGTATCTTCCTTACCGAGAGAAAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: SRSRLAAGLPGRVPC*IFTWACIFLTERKR Trigger: CCTTTTTCTCTCGGTAAGGAAGATACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR GCA 90 bp | GTATTTACAGGACTTATTAATATAGGGATCTACATCCTACCATCCTaGCAGAGTCTTAATAGCACGGTGGAGCAGCTCCCTCAAGAATCC | + |
|
Preference number: 1 (lower is better) Translates to: VFTGLINIGIYILPS*QSLNSTVEQLPQES Trigger: GGATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGACTCTGGCAGGATGGTAGGATGTAGATCCCTATATTAATAAGTCCTGTAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 90 bp | TTAAGAAAGAAGTTATTTACCACTTTAATAGGGCTGTCCAACACTTaGTCACATAGATCATTGGGAAACCTAATTGCTTCCATAGCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: LRKKLFTTLIGLSNT*SHRSLGNLIASIAF Trigger: GAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTATTAAAGTGGTAAATAACTTCTTTCTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCAGCTGGGGGAGAGTGCCATGTTaGATTTTCACATGGGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: LDSVLLGCLSFQESACSWGRVPC*IFTWAC Trigger: ACATGCCCATGTGAAAATCCAACATGGCACTCTCCC...CCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 90 bp | TTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTaGGATTTTCACATGGGCATGTATCTTCCTTACCGAGAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FQESACSWPSRESAM*DFHMGMYLPYREKK Trigger: CTTTTTCTCTCGGTAAGGAAGATACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATGGGCATGTCCAAACATCCAAAACTaGAAGGGATACACCAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LAAGLPGRVPCWIFTWACPNIQN*KGYTSH Trigger: GTGGCTGGTGTATCCCTTTCAGTTTTGGATGTTTGG...ACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCTCTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCGCCTTCCAGGGAGAGTaGCATGTTGGATTTTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: EALDSVLLGCLSFQESACAFQGE*HVGFSH Trigger: ATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGC...GCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTGCTTATCTGTGGAAAAGCTCAGTACTGTTAGGATaGCTCAGCTTCCAGGAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: STVEQLPQESPFAYLWKSSVLLG*LSFQES Trigger: CGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGA...GCTTTTCCACAGATAAGCAAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGCAGGGGTCTTGCTTTGTATCCCAGGCTGACTTTGAACTTGCAATCTTCCGGGCTGTCCAACACTTaGTCACATAGATCATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: WGRGLALYPRLTLNLQSSGLSNT*SHRSLG Trigger: TCCCAATGATCTATGTGACCAAGTGTTGGACAGCCC...GGAAGATTGCAAGTTCAAAGTCAGCCTGGGATACAAAGCAAGACCCCTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGCAGGGGTCTTGCTTTGTATCCCAGGCTGACTTTGAACTTGCAATCTTCCTACTGGGATCTCAAATaGTGCCTAGCTATCACTTGC | + |
|
Preference number: 2 (lower is better) Translates to: WGRGLALYPRLTLNLQSSYWDLK*CLAITC Trigger: GCAAGTGATAGCTAGGCATCATTTGAGATCCCAGTA...GGAAGATTGCAAGTTCAAAGTCAGCCTGGGATACAAAGCAAGACCCCTGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGGGAAACCTAATTGCTTCCATAGCTTTCCTATCTCATCAGAGGAGAGATTTCCAGGAGTCGGCTTaGAGCTGGCCTTCCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLGNLIASIAFLSHQRRDFQESA*SWPSRE Trigger: CTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAA...ATCTCTCCTCTGATGAGATAGGAAAGCTATGGAAGCAATTAGGTTTCCCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCAGCTGGAAATTAGAAGACAGTTaGTCGTTCTTCATGATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LDSVLLGCLSFQESACSWKLEDS*SFFMIL Trigger: GAGGATCATGAAGAACGATCAACTGTCTTCTAATTT...CCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCTCTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCGAGATCCACTTGGCTTaGAACTATGGAAGATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: EALDSVLLGCLSFQESACEIHLA*NYGRCF Trigger: AAAACATCTTCCATAGTTGCAAGCCAAGTGGATCTC...GCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAGAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTGCTTATCTGTGGAAAAGCTATGTAAGCCAAGCTTaGATGCTAATATTGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: STVEQLPQESPFAYLWKSYVSQA*MLILHR Trigger: CCTGTGCAATATTAGCATGCAAGCTTGGCTTACATA...GCTTTTCCACAGATAAGCAAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTGCTTATCTGTGGAAAAGCTGTTGGATTTTCACATaGGCATGTATCTTCCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: STVEQLPQESPFAYLWKSCWIFT*ACIFLT Trigger: GGTAAGGAAGATACATGCCCATGTGAAAATCCAACA...GCTTTTCCACAGATAAGCAAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATGGGCATGTATCTAAATTAGAAGACAGTTaGTCGTTCTTCATGATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: QLAFQGECHVGFSHGHVSKLEDS*SFFMIL Trigger: GAGGATCATGAAGAACGATCAACTGTCTTCTAATTT...AGATACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGCAGGGGTCTTGCTTTGTATCCCAGGCTGACTTTGAACTTGCAATCTTCCGACAAAGAGGACGAGTaGGTTAAGAAAGAAGTTATT | + |
|
Preference number: 2 (lower is better) Translates to: WGRGLALYPRLTLNLQSSDKEDE*VKKEVI Trigger: AATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTC...GGAAGATTGCAAGTTCAAAGTCAGCCTGGGATACAAAGCAAGACCCCTGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGGGAAACCTAATTGCTTCCATAGCTTTCCTATCTCATCAGAGGAGAGATGTCTTAATAGCACGGTaGAGCAGCTCCCTCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLGNLIASIAFLSHQRRDVLIAR*SSSLKN Trigger: ATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGAC...ATCTCTCCTCTGATGAGATAGGAAAGCTATGGAAGCAATTAGGTTTCCCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGACAAAGAGGACGAGTGGGTTAAGAAAGAAGTTATTTACCACTTTAATATCAGTACTGTTAGGATaGCTCAGCTTCCAGGAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: WQTKRTSGLRKKLFTTLISVLLG*LSFQES Trigger: CGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGA...TATTAAAGTGGTAAATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTCTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAATGGCAGACAAAGAGGACGAGTGGGTTAAGAAAGAAGTTATTTACCACTGGGCTGTCCAACACTTaGTCACATAGATCATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TKWQTKRTSGLRKKLFTTGLSNT*SHRSLG Trigger: TCCCAATGATCTATGTGACCAAGTGTTGGACAGCCC...AGTGGTAAATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTCTGCCATTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 90 bp | TTTACCACTTTAATAGGGCTGTCCAACACTTGGTCACATAGATCATaGGGAAACCTAATTGCTTCCATAGCTTTCCTATCTCATCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FTTLIGLSNTWSHRS*GNLIASIAFLSHQR Trigger: CCTCTGATGAGATAGGAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTATTAAAGTGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGACAAAGAGGACGAGTGGGTTAAGAAAGAAGTTATTTACCACTTTAATAGCCTTCCAGGGAGAGTaGCATGTTGGATTTTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: WQTKRTSGLRKKLFTTLIAFQGE*HVGFSH Trigger: ATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGC...TATTAAAGTGGTAAATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTCTTGATTTCTGCATTTCCCAAAAATCTGAAGATATGGCAATGTGGTTATCCAAACATCCAAAACTaGAAGGGATACACCAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLLISAFPKNLKIWQCGYPNIQN*KGYTSH Trigger: GTGGCTGGTGTATCCCTTTCAGTTTTGGATGTTTGG...ATAACCACATTGCCATATCTTCAGATTTTTGGGAAATGCAGAAATCAAGAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAACACTTGGTCACATAGATCATTGGGAAACCTAATTGCTTCCATAGCTTTCGAGATCCACTTGGCTTaGAACTATGGAAGATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SNTWSHRSLGNLIASIAFEIHLA*NYGRCF Trigger: AAAACATCTTCCATAGTTGCAAGCCAAGTGGATCTC...GAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTCTTGATTTCTGCATTTCCCAAAAATCTGAAGATATGGCAATGTGGTTATGTCTTAATAGCACGGTaGAGCAGCTCCCTCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLLISAFPKNLKIWQCGYVLIAR*SSSLKN Trigger: ATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGAC...ATAACCACATTGCCATATCTTCAGATTTTTGGGAAATGCAGAAATCAAGAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAATGGCAGACAAAGAGGACGAGTGGGTTAAGAAAGAAGTTATTTACCACTCGAGTCTTCTTCTTTTaGGATACTGTGTATCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TKWQTKRTSGLRKKLFTTRVFFF*DTVYQS Trigger: ACTCTGATACACAGTATCCCAAAAGAAGAAGACTCG...AGTGGTAAATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTCTGCCATTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 90 bp | GAACCAGGCTCTCTTGTTCTAATCTTCCTTGATGTGATACCATCTTaGGGTATACTAAAGGTTCTACTAAATTCTGTGGCAAATATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EPGSLVLIFLDVIPS*GILKVLLNSVANIS Trigger: AGAAATATTTGCCACAGAATTTAGTAGAACCTTTAGTATACCCAAAGATGGTATCACATCAAGGAAGATTAGAACAAGAGAGCCTGGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR CAA 90 bp | TCGAATATAAAGTATGATTATGTAAGCCAAGCTTGCATGCTAATATaGCACAGGATAGAAAGCAATAAATCAAGACAAGGAGCTTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SNIKYDYVSQACMLI*HRIESNKSRQGASL Trigger: CAAGGAAGCTCCTTGTCTTGATTTATTGCTTTCTATCCTGTGCAATATTAGCATGCAAGCTTGGCTTACATAATCATACTTTATATTCGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR GCA 72 bp | GTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTaGAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLGCLSFQESA*SWPSRESAMLD Trigger: ATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | TTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCAGCTaGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGCLSFQESACS*PSRESAMLDFH Trigger: GTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | CGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTaGATTTTCACATGGGCATGTATCTTCCTTACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLAAGLPGRVPC*IFTWACIFLTE Trigger: CTCGGTAAGGAAGATACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTCAAATTAGAAGACAGTaGATCGTTCTTCATGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASRSRLAAGLPGRVPCWIQIRRQ*IVLHDP Trigger: AGGATCATGAAGAACGATCAACTGTCTTCTAATTTG...AATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | ACATCCTACCATCCTGCCAGAGTCTTAATAGCACGGTaGAGCAGCTCCCTCAAGAATCCCCATTTGCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: TSYHPARVLIAR*SSSLKNPHLLI Trigger: GATAAGCAAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGACTCTGGCAGGATGGTAGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCCAGAGTCTTAATAGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTACCAGCCACCTCACATaGTGGTACTGTTCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCQSLNSTVEQLPQESPFTSHLT*WYCSFL Trigger: AAGAAATGAACAGTACCACAATGTGAGGTGGCTGGT...AAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGACTCTGGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGACAAAGAGGACGAGTGGGTTAAGAAAGAAGTTATTTACCACTTTAATACTTCCAGGAGTCGGCTaGCAGCTGGCCTTCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WQTKRTSGLRKKLFTTLILPGVG*QLAFQG Trigger: TCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAG...TATTAAAGTGGTAAATAACTTCTTTCTTAACCCACTCGTCCTCTTTGTCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTGCTTATCTGTGGAAAAGCTTATGTAAGCCAAGCTaGCATGCTAATATTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: STVEQLPQESPFAYLWKSLCKPS*HANIAQ Trigger: CTGTGCAATATTAGCATGCAAGCTTGGCTTACATAA...GCTTTTCCACAGATAAGCAAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR GCA 72 bp | GGACTTATTAATATAGGGATCTACATCCTACCATCCTaGCAGAGTCTTAATAGCACGGTGGAGCAGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLINIGIYILPS*QSLNSTVEQLP Trigger: AGGGAGCTGCTCCACCGTGCTATTAAGACTCTGGCAGGATGGTAGGATGTAGATCCCTATATTAATAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACACTTGGTCACATAGATCATTGGGAAACCTAATTGCTTCCATAGCTTTCACCAGCCACCTCACATaGTGGTACTGTTCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SNTWSHRSLGNLIASIAFTSHLT*WYCSFL Trigger: AAGAAATGAACAGTACCACAATGTGAGGTGGCTGGT...GAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | TCTTTTGGGATACTGTGTATCAGAGTAAGTGCACTGTaGTTATCTGGTAACCAAAGTGCAGATAAGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SFGILCIRVSAL*LSGNQSADKRS Trigger: GGATCTCTTATCTGCACTTTGGTTACCAGATAACCACAGTGCACTTACTCTGATACACAGTATCCCAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGGCTGTCCAACACTTGGTCACATAGATCATTGGGAAACCTAATTGCTTCCCAAATTAGAAGACAGTaGATCGTTCTTCATGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: IGLSNTWSHRSLGNLIASQIRRQ*IVLHDP Trigger: AGGATCATGAAGAACGATCAACTGTCTTCTAATTTG...GGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACACTTGGTCACATAGATCATTGGGAAACCTAATTGCTTCCATAGCTTTCCTCAAGAATCCCCATTaGCTTATCTGTGGAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SNTWSHRSLGNLIASIAFLKNPH*LICGKA Trigger: AGCTTTTCCACAGATAAGCAAATGGGGATTCTTGAG...GAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATCCTGATTTACTTACTTGTTTTTGTTTTGAACCAGGCTCTCTTGTTCTATATCCCAGGCTGACTTaGAACTTGCAATCTTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: WNPDLLTCFCFEPGSLVLYPRLT*NLQSSY Trigger: GTAGGAAGATTGCAAGTTCAAAGTCAGCCTGGGATA...TAGAACAAGAGAGCCTGGTTCAAAACAAAAACAAGTAAGTAAATCAGGATTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | TTATCTGGTAACCAAAGTGCAGATAAGAGATCCACTTaGCTTGCAACTATGGAAGATGTTTTAAATCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSGNQSADKRST*LATMEDVLNPH Trigger: GTGAGGATTTAAAACATCTTCCATAGTTGCAAGCCAAGTGGATCTCTTATCTGCACTTTGGTTACCAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CCA 72 bp | AAGTTATTTACCACTTTAATAGGGCTGTCCAACACTTaGTCACATAGATCATTGGGAAACCTAATTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLFTTLIGLSNT*SHRSLGNLIAS Trigger: GGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTATTAAAGTGGTAAATAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR TCA 90 bp | CTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCAGCTGGTCTGGCCGGTGCAGGTaGTGCTGCTGGAAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSVLLGCLSFQESACSWSGRCR*CCWKVC Trigger: ACACACCTTCCAGCAGCATCACCTGCACCGGCCAGA...CCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTGTGACCGCTCCTCGATaGGGTTCTTGTTACAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ASRSRLAAGLPGRVPCWIVTAPR*GSCYNT Trigger: GGTGTTGTAACAAGAACCGCATCGAGGAGCGGTCAC...AATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 72 bp | AGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTaGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STVRMPQLPGVG*QLAFQGECHVG Trigger: TCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTGTTACAACACCTGTaGGCCGCGATCACTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASRSRLAAGLPGRVPCWILLQHL*AAITSQ Trigger: CTGTGAAGTGATCGCGGCCCACAGGTGTTGTAACAA...AATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATGGGCATGTTGCTGGAAGGTGTGTTaGAGTGACCCATGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAAGLPGRVPCWIFTWACCWKVC*SDPWQS Trigger: GCTCTGCCATGGGTCACTCCAACACACCTTCCAGCA...ACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCTTGACTCAGTACTGTTAGGATGCCTCAGCTTCCAGGAGTCGGCTTGCGTGACCGCTCCTCGATaGGGTTCTTGTTACAACACC | + |
|
Preference number: 4 (lower is better) Translates to: EALDSVLLGCLSFQESACVTAPR*GSCYNT Trigger: GGTGTTGTAACAAGAACCGCATCGAGGAGCGGTCAC...GCAAGCCGACTCCTGGAAGCTGAGGCATCCTAACAGTACTGAGTCAAGAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGCTGTCCAACACTTGGTCACATAGATCATTGGGAAACCTAATTGCTTCCTCTGGCCGGTGCAGGTaGTGCTGCTGGAAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGLSNTWSHRSLGNLIASSGRCR*CCWKVC Trigger: ACACACCTTCCAGCAGCATCACCTGCACCGGCCAGA...GGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTTTCACATGGGCATGTATTTCCCAATTACTATaGAGGCATCCACACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAGLPGRVPCWIFTWACISQLL*RHPHRK Trigger: CTTCCTGTGTGGATGCCTCCATAGTAATTGGGAAAT...ACATGCCCATGTGAAAATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTTGCAATCTTCCTACCTCCATGTTTCAAGTACTGGGATCTCAAATGATTGCTGGAAGGTGTGTTaGAGTGACCCATGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNLQSSYLHVSSTGISNDCWKVC*SDPWQS Trigger: GCTCTGCCATGGGTCACTCCAACACACCTTCCAGCA...ATCATTTGAGATCCCAGTACTTGAAACATGGAGGTAGGAAGATTGCAAGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGGGAAACCTAATTGCTTCCATAGCTTTCCTATCTCATCAGAGGAGAGATTTGTTACAACACCTGTaGGCCGCGATCACTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGNLIASIAFLSHQRRDLLQHL*AAITSQ Trigger: CTGTGAAGTGATCGCGGCCCACAGGTGTTGTAACAA...ATCTCTCCTCTGATGAGATAGGAAAGCTATGGAAGCAATTAGGTTTCCCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 72 bp | TTAATAGGGCTGTCCAACACTTGGTCACATAGATCATaGGGAAACCTAATTGCTTCCATAGCTTTCCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGLSNTWSHRS*GNLIASIAFLS Trigger: AGATAGGAAAGCTATGGAAGCAATTAGGTTTCCCAATGATCTATGTGACCAAGTGTTGGACAGCCCTATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| 3UTR CAA 72 bp | TTTATTAGGACTGTTAGGGACTTTTATGCAAAGCTCTaGATTTCTGCATTTCCCAAAAATCTGAAGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: FIRTVRDFYAKL*ISAFPKNLKIW Trigger: CCATATCTTCAGATTTTTGGGAAATGCAGAAATCAAGAGCTTTGCATAAAAGTCCCTAACAGTCCTAATAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122120.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGGAGTCGGCTTGCAGCTGGCCTTCCAGGGAGAGTGCCATGTTGGATTAGGAAGGTCGGTTTCTaGTTGTCCCAGCCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSRLAAGLPGRVPCWIRKVGF*LSQPLS Trigger: GGAAAGTGGCTGGGACAACAAGAAACCGACCTTCCT...AATCCAACATGGCACTCTCCCTGGAAGGCCAGCTGCAAGCCGACTCCTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS TCA 90 bp | TCCTTCTGGCCGGTGCAGGTGATGCTGCTGGAAGGTGTGTTGGAGTaGCCCATGGCAGAGCAGCATCGCACAAGCACTTATCCACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFWPVQVMLLEGVLE*PMAEQHRTSTYPQV Trigger: TACTTGTGGATAAGTGCTTGTGCGATGCTGCTCTGCCATGGGTCACTCCAACACACCTTCCAGCAGCATCACCTGCACCGGCCAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCAGAGTCTTAATAGCACGGTGGAGCAGCTCCCTCAAGAATCCCCATTTAGGAAGGTCGGTTTCTaGTTGTCCCAGCCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCQSLNSTVEQLPQESPFRKVGF*LSQPLS Trigger: GGAAAGTGGCTGGGACAACAAGAAACCGACCTTCCT...AAATGGGGATTCTTGAGGGAGCTGCTCCACCGTGCTATTAAGACTCTGGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS TCA 72 bp | CCGGTGCAGGTGATGCTGCTGGAAGGTGTGTTGGAGTaGCCCATGGCAGAGCAGCATCGCACAAGCACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PVQVMLLEGVLE*PMAEQHRTSTY Trigger: ATAAGTGCTTGTGCGATGCTGCTCTGCCATGGGTCACTCCAACACACCTTCCAGCAGCATCACCTGCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS CAA 72 bp | CTATGGAGGCATCCACACAGGAAGGTCGGTTTCTTGTaGTCCCAGCCACTTTCCCAGGTAAACAGGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: LWRHPHRKVGFL*SQPLSQVNRNT Trigger: AGTGTTCCTGTTTACCTGGGAAAGTGGCTGGGACAACAAGAAACCGACCTTCCTGTGTGGATGCCTCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS CAA 72 bp | TTACTATGGAGGCATCCACACAGGAAGGTCGGTTTCTaGTTGTCCCAGCCACTTTCCCAGGTAAACAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLWRHPHRKVGF*LSQPLSQVNRN Trigger: GTTCCTGTTTACCTGGGAAAGTGGCTGGGACAACAAGAAACCGACCTTCCTGTGTGGATGCCTCCATAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||
| CDS CAA 90 bp | CGTGTAGTCTTAATCTTGTTGCCTGTAGCACACATCCATCCAGAATaGTCAGGGAGTGTCTTACATTCTTCTCCTTCTAGGCAGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVVLILLPVAHIHPE*SGSVLHSSPSRQGS Trigger: GGAGCCCTGCCTAGAAGGAGAAGAATGTAAGACACTCCCTGACAATTCTGGATGGATGTGTGCTACAGGCAACAAGATTAAGACTACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075080.6 ENSMUST00000122120.8 |
||