Pregenerated sensors for TAF9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047242Ensembl transcript IDs: ENSMUST00000055497.15, ENSMUST00000113495.9
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCCTATCAATGAGAAGTGCTTAGCAGGCATGAAAGGCAAGTGCTaGGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VPINEKCLAGMKGKC*DPNALLGVKKSKSR Trigger: TCTGCTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTCATGCCTGCTAAGCACTTCTCATTGATAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR GCA 90 bp | GAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTaGCAGGCATCTAGGGCATATTACACATTCCAGTCACAGTCTATT | + |
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Preference number: 1 (lower is better) Translates to: EEEQKQTLRFTGTAE*QASRAYYTFQSQSI Trigger: AATAGACTGTGACTGGAATGTGTAATATGCCCTAGATGCCTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 90 bp | CACTATCAAAAGAAAGTCCTGTTAAATGTAAATGAGACCAGGAGCTaGAGTCCAAGCGCTGCTGCTAGTGACACATATCGGAAAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: HYQKKVLLNVNETRS*SPSAAASDTYRKTA Trigger: AGCAGTTTTCCGATATGTGTCACTAGCAGCAGCGCTTGGACTTCAGCTCCTGGTCTCATTTACATTTAACAGGACTTTCTTTTGATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 90 bp | TACACATTCCAGTCACAGTCTATTACATTTAAGTGCAATGGCAAATaGCTTAAGGCGATGAGAGGTGGGAACAGAAAACAAACGAGATCT | + |
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Preference number: 1 (lower is better) Translates to: YTFQSQSITFKCNGK*LKAMRGGNRKQTRS Trigger: AGATCTCGTTTGTTTTCTGTTCCCACCTCTCATCGCCTTAAGTCATTTGCCATTGCACTTAAATGTAATAGACTGTGACTGGAATGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 90 bp | ATGAAACTAATACCAGAACCTAGGCTTTCTTGTATTCTGCCTCCCTaGGAACATTCTAGTCCTGACATCTGTGTTGTATACTGCACATTT | + |
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Preference number: 1 (lower is better) Translates to: MKLIPEPRLSCILPP*EHSSPDICVVYCTF Trigger: AAATGTGCAGTATACAACACAGATGTCAGGACTAGAATGTTCTCAGGGAGGCAGAATACAAGAAAGCCTAGGTTCTGGTATTAGTTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 90 bp | CACAGTCTATTACATTTAAGTGCAATGGCAAATGACTTAAGGCGATaGGAGGTGGGAACAGAAAACAAACGAGATCTAGATAGGAAATCA | + |
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Preference number: 1 (lower is better) Translates to: HSLLHLSAMANDLRR*EVGTENKRDLDRKS Trigger: TGATTTCCTATCTAGATCTCGTTTGTTTTCTGTTCCCACCTCTCATCGCCTTAAGTCATTTGCCATTGCACTTAAATGTAATAGACTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR GCA 90 bp | AACCAACGGACTGGTTCAAGCCGTAGTGACCAAAGCATATATATATaGAGGTGGTTAAGAAAAACAACAAAGTTCTTTAGTGGTTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: NQRTGSSRSDQSIYI*RWLRKTTKFFSGFV Trigger: GACAAAACCACTAAAGAACTTTGTTGTTTTTCTTAACCACCTGCATATATATATGCTTTGGTCACTACGGCTTGAACCAGTCCGTTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 90 bp | ATCAGATCAGCTTTCACTAACCGTCCTAGACAATTAAAACTGGCATaGAATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: IRSAFTNRPRQLKLA*NISVLLLIYFMCQT Trigger: TGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATTTCATGCCAGTTTTAATTGTCTAGGACGGTTAGTGAAAGCTGATCTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGAATGAGACCAGGAGCTaGAGTCCAAGCGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ERQVLRPECSVRSEEEQKNETRS*SPSAAA Trigger: AGCAGCAGCGCTTGGACTTCAGCTCCTGGTCTCATT...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTAATGAGACCAGGAGCTaGAGTCCAAGCGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LSGMKVSESFSNVGYVELNETRS*SPSAAA Trigger: AGCAGCAGCGCTTGGACTTCAGCTCCTGGTCTCATT...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR GCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTACAGGAACTGCAGAGTaGCAGGCATCTAGGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: LSGMKVSESFSNVGYVELTGTAE*QASRAY Trigger: ATATGCCCTAGATGCCTGGCACTCTGCAGTTCCTGT...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGCTAAACCCTCACAACATCCCTGTGAGGTAGGCAGGGTAGATGTTATTCCAATGTTGGCTATGTaGAACTTAAACCAAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: TPAKPSQHPCEVGRVDVIPMLAM*NLNQIK Trigger: TTTGATTTGGTTTAAGTTCCACATAGCCAACATTGG...AATAACATCTACCCTGCCTACCTCACAGGGATGTTGTGAGGGTTTAGCTGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR CAA 90 bp | CTTGTATTCTGCCTCCCTGAGAACATTCTAGTCCTGACATCTGTGTaGTATACTGCACATTTCTCTTATGGTATTGATCAGATCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LVFCLPENILVLTSV*YTAHFSYGIDQISF Trigger: AAAGCTGATCTGATCAATACCATAAGAGAAATGTGCAGTATACAACACAGATGTCAGGACTAGAATGTTCTCAGGGAGGCAGAATACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTCCTGTTAAATGTAAATaGGACCAGGAGCTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LSGMKVSESFSNVGYVELPVKCK*DQELKS Trigger: GGACTTCAGCTCCTGGTCTCATTTACATTTAACAGG...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR TCA 90 bp | GCATCTAGGGCATATTACACATTCCAGTCACAGTCTATTACATTTAAGTGCAATCCTGTTAAATGTAAATaGGACCAGGAGCTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ASRAYYTFQSQSITFKCNPVKCK*DQELKS Trigger: GGACTTCAGCTCCTGGTCTCATTTACATTTAACAGG...ATTGCACTTAAATGTAATAGACTGTGACTGGAATGTGTAATATGCCCTAGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CCA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTGTGACTTTTCCCTGTTaGCCTGATAGGGAAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: NISVLLLIYFMCQTPPYAVTFPC*PDRERE Trigger: TTCTCTTTCCCTATCAGGCCAACAGGGAAAAGTCAC...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTTTTGGGGTACCTAAATaGAGTCAGGTGACTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGMKVSESFSNVGYVELFGVPK*SQVTFP Trigger: GGGAAAAGTCACCTGACTCCATTTAGGTACCCCAAA...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAAATCTTCCTTCAGGCTTaGTCCCATCTTATGTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ILSGMKVSESFSNVGYVEIFLQA*SHLMCD Trigger: GTCACACATAAGATGGGATCAAGCCTGAAGGAAGAT...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACAATTGATGCAAAAGTaGCTATCAATGAGAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ILSGMKVSESFSNVGYVEQLMQK*LSMRSA Trigger: AGCACTTCTCATTGATAGGCACTTTTGCATCAATTG...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 72 bp | GACACCCTCAGCAGCAAGCTAGAAAGGTGGTCTGAATaGAACCAACGGACTGGTTCAAGCCGTAGTGACCAA | + |
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Preference number: 3 (lower is better) Translates to: DTLSSKLERWSE*NQRTGSSRSDQ Trigger: TTGGTCACTACGGCTTGAACCAGTCCGTTGGTTTCATTCAGACCACCTTTCTAGCTTGCTGCTGAGGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR GCA 72 bp | CTTAGCAGGCATGAAAGGCAAGTGCTGAGACCCGAATaGTCTGTTAGGAGTGAAGAAGAGCAAAAGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: LSRHERQVLRPE*SVRSEEEQKQT Trigger: TGTCTGCTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTCATGCCTGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR CCA 72 bp | GGGGTACCTAAATGGAGTCAGGTGACTTTTCCCTGTTaGCCTGATAGGGAAAGAGAATCAGAATCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: GVPKWSQVTFPC*PDRERESESSF Trigger: GAAGGAAGATTCTGATTCTCTTTCCCTATCAGGCCAACAGGGAAAAGTCACCTGACTCCATTTAGGTACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 72 bp | AAGAAAGTCCTGTTAAATGTAAATGAGACCAGGAGCTaGAGTCCAAGCGCTGCTGCTAGTGACACATATCGG | + |
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Preference number: 3 (lower is better) Translates to: KKVLLNVNETRS*SPSAAASDTYR Trigger: CCGATATGTGTCACTAGCAGCAGCGCTTGGACTTCAGCTCCTGGTCTCATTTACATTTAACAGGACTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CAA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTCATGGTTGGGAAATTTaGGGGTACCTAAATGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LSGMKVSESFSNVGYVELHGWEI*GYLNGV Trigger: GACTCCATTTAGGTACCCCAAAATTTCCCAACCATG...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 72 bp | CAGTCACAGTCTATTACATTTAAGTGCAATGGCAAATaGCTTAAGGCGATGAGAGGTGGGAACAGAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: QSQSITFKCNGK*LKAMRGGNRKQ Trigger: TTGTTTTCTGTTCCCACCTCTCATCGCCTTAAGTCATTTGCCATTGCACTTAAATGTAATAGACTGTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 72 bp | TTACATTTAAGTGCAATGGCAAATGACTTAAGGCGATaGGAGGTGGGAACAGAAAACAAACGAGATCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: LHLSAMANDLRR*EVGTENKRDLD Trigger: ATCTAGATCTCGTTTGTTTTCTGTTCCCACCTCTCATCGCCTTAAGTCATTTGCCATTGCACTTAAATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CAA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTTGTATAGAAACATGGTaGGGAAATTTTGGGGTACCT | + |
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Preference number: 3 (lower is better) Translates to: LSGMKVSESFSNVGYVELCIETW*GNFGVP Trigger: AGGTACCCCAAAATTTCCCAACCATGTTTCTATACA...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR TCA 72 bp | ATCTGTGTTGTATACTGCACATTTCTCTTATGGTATTaGTCAGATCAGCTTTCACTAACCGTCCTAGACAAT | + |
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Preference number: 3 (lower is better) Translates to: ICVVYCTFLLWY*SDQLSLTVLDN Trigger: ATTGTCTAGGACGGTTAGTGAAAGCTGATCTGATCAATACCATAAGAGAAATGTGCAGTATACAACACAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CAA 90 bp | GCATCTAGGGCATATTACACATTCCAGTCACAGTCTATTACATTTAAGTGCAATTCTAGAAGCAAGTACTaGTACTGTAACAAAACCTTC | + |
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Preference number: 3 (lower is better) Translates to: ASRAYYTFQSQSITFKCNSRSKY*YCNKTF Trigger: GAAGGTTTTGTTACAGTACAAGTACTTGCTTCTAGA...ATTGCACTTAAATGTAATAGACTGTGACTGGAATGTGTAATATGCCCTAGATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CAA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTTCTAGAAGCAAGTACTaGTACTGTAACAAAACCTTC | + |
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Preference number: 3 (lower is better) Translates to: NISVLLLIYFMCQTPPYASRSKY*YCNKTF Trigger: GAAGGTTTTGTTACAGTACAAGTACTTGCTTCTAGA...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR-3UTR CAA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTAGTTCTTTAGTGGTTTaGTCTGAGTCCAGTGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: NISVLLLIYFMCQTPPYASSLVV*SESSVN Trigger: ATTTACACTGGACTCAGACAAAACCACTAAAGAACT...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTGCCAGGTTTCCACCTCGGTCTaGCTCCACCCCTCATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SEEEQKQTLRFTGTAECQVSTSV*LHPSSE Trigger: CTCGGATGAGGGGTGGAGCCAGACCGAGGTGGAAAC...CTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTGCCAGAGTTGCTGCAGGAGCTaGCTTGGCAGGTGTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SEEEQKQTLRFTGTAECQSCCRS*LGRCGL Trigger: CAGTCCACACCTGCCAAGCCAGCTCCTGCAGCAACT...CTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGTTGGACTGCAGTTGCTaGAGGAGCTGGCTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERQVLRPECSVRSEEEQKLDCSC*RSWLGR Trigger: CCTGCCAAGCCAGCTCCTGCAGCAACTGCAGTCCAA...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTGCCAGCAGAACATTTTGGACTaGAGTTGCTGCAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEEEQKQTLRFTGTAECQQNILD*SCCRSW Trigger: CCAGCTCCTGCAGCAACTGCAGTCCAAAATGTTCTG...CTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGGGCTCCATTTTCTCTTaGGGCTCCTCAACCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ERQVLRPECSVRSEEEQKGSIFS*GSSTSE Trigger: CTCCGAGGTTGAGGAGCCGCAAGAGAAAATGGAGCC...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGCAGAACATTTTGGACTaGAGTTGCTGCAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERQVLRPECSVRSEEEQKQNILD*SCCRSW Trigger: CCAGCTCCTGCAGCAACTGCAGTCCAAAATGTTCTG...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTGCCAGTCATCGTCGTCATCATaGTTCCTCTTCAGTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SEEEQKQTLRFTGTAECQSSSSS*FLFSGF Trigger: AAACCCACTGAAGAGGAAGCATGATGACGACGATGA...CTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAGAAGAGCAAAAGCAGACACTCCGGTTCACAGGAACTGCAGAGTGCCAGTGTGGACTGAGAAGGTaGAATCTGCACAGCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SEEEQKQTLRFTGTAECQCGLRR*NLHSKS Trigger: AGATTTGCTGTGCAGATTCCACCTTCTCAGTCCACA...CTGGCACTCTGCAGTTCCTGTGAACCGGAGTGTCTGCTTTTGCTCTTCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGATCCTTCAGGATCTGTaGCATCACCAAGGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERQVLRPECSVRSEEEQKILQDL*HHQGIS Trigger: AGAGATGCCTTGGTGATGGCACAGATCCTGAAGGAT...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGTGCACAGCAAATCTTTaGCTTGTCACTGACACCGGA | + |
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Preference number: 4 (lower is better) Translates to: ERQVLRPECSVRSEEEQKCTANL*LVTDTG Trigger: TCCGGTGTCAGTGACAAGCCAAAGATTTGCTGTGCA...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR TCA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTGGTGGCTGTGTTCTGTaGGGAAACCATGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NISVLLLIYFMCQTPPYAGGCVL*GNHAGG Trigger: ACCACCAGCATGGTTTCCTCACAGAACACAGCCACC...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR TCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTGGTGGCTGTGTTCTGTaGGGAAACCATGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LSGMKVSESFSNVGYVELGGCVL*GNHAGG Trigger: ACCACCAGCATGGTTTCCTCACAGAACACAGCCACC...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | GCATCTAGGGCATATTACACATTCCAGTCACAGTCTATTACATTTAAGTGCAATGCCAGATACTGCTTGTaGGGGTGCTACAGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ASRAYYTFQSQSITFKCNARYCL*GCYRRS Trigger: ACTCCTCCTGTAGCACCCCCACAAGCAGTATCTGGC...ATTGCACTTAAATGTAATAGACTGTGACTGGAATGTGTAATATGCCCTAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTGCCAGATACTGCTTGTaGGGGTGCTACAGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: NISVLLLIYFMCQTPPYAARYCL*GCYRRS Trigger: ACTCCTCCTGTAGCACCCCCACAAGCAGTATCTGGC...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAAAGTTGCTGCAGGAGCTaGCTTGGCAGGTGTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ILSGMKVSESFSNVGYVESCCRS*LGRCGL Trigger: CAGTCCACACCTGCCAAGCCAGCTCCTGCAGCAACT...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTATTTGGGCCAGATACTaGTTGTGGGGGTGCTACAGG | + |
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Preference number: 4 (lower is better) Translates to: NISVLLLIYFMCQTPPYAIWARY*LWGCYR Trigger: CCTGTAGCACCCCCACAAGCAGTATCTGGCCCAAAT...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | TTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACTTATTTTGGACTGCAGTTaGTGCAGGAGCTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSGMKVSESFSNVGYVELILDCS*CRSWLG Trigger: GCCAAGCCAGCTCCTGCAGCAACTGCAGTCCAAAAT...AAGTTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CCA 90 bp | AATATCTCTGTCTTGTTACTGATCTATTTCATGTGTCAAACACCACCCTATGCTTGCACAGCAAATCTTTaGCTTGTCACTGACACCGGA | + |
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Preference number: 4 (lower is better) Translates to: NISVLLLIYFMCQTPPYACTANL*LVTDTG Trigger: TCCGGTGTCAGTGACAAGCCAAAGATTTGCTGTGCA...AGCATAGGGTGGTGTTTGACACATGAAATAGATCAGTAACAAGACAGAGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAAATCCTTCAGGATCTGTaGCATCACCAAGGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: ILSGMKVSESFSNVGYVEILQDL*HHQGIS Trigger: AGAGATGCCTTGGTGATGGCACAGATCCTGAAGGAT...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR GCA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAATCATCGTCGTCATCATaGTTCCTCTTCAGTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ILSGMKVSESFSNVGYVESSSSS*FLFSGF Trigger: AAACCCACTGAAGAGGAAGCATGATGACGACGATGA...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| 3UTR CAA 72 bp | CATCTGTGTTGTATACTGCACATTTCTCTTATGGTATaGATCAGATCAGCTTTCACTAACCGTCCTAGACAA | + |
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Preference number: 4 (lower is better) Translates to: HLCCILHISLMV*IRSAFTNRPRQ Trigger: TTGTCTAGGACGGTTAGTGAAAGCTGATCTGATCAATACCATAAGAGAAATGTGCAGTATACAACACAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS CCA 90 bp | TCCTCAACCTCGGAGATAGAGCTGCAGGCGGTTTCCACCTCGGTCTaGCTCCACCCCTCATCCGAGGACGACTCCTCCTCGACAATCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSTSEIELQAVSTSV*LHPSSEDDSSSTIW Trigger: CCAGATTGTCGAGGAGGAGTCGTCCTCGGATGAGGGGTGGAGCCAGACCGAGGTGGAAACCGCCTGCAGCTCTATCTCCGAGGTTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS GCA 90 bp | GGAGCGTTCTTGATAGGCGCCATCTTGGCCGGCTCCATTTTCTCTTaGGGCTCCTCAACCTCGGAGATAGAGCTGCAGGCGGTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: GAFLIGAILAGSIFS*GSSTSEIELQAVST Trigger: GGTGGAAACCGCCTGCAGCTCTATCTCCGAGGTTGAGGAGCCGCAAGAGAAAATGGAGCCGGCCAAGATGGCGCCTATCAAGAACGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS-3UTR CAA 90 bp | ACACCAGCTAAACCCTCACAACATCCCTGTGAGGTAGGCAGGGTAGATGTTATTTCTCTCGGAGCGTTCTaGATAGGCGCCATCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TPAKPSQHPCEVGRVDVISLGAF*IGAILA Trigger: GGCCAAGATGGCGCCTATCAAGAACGCTCCGAGAGA...AATAACATCTACCCTGCCTACCTCACAGGGATGTTGTGAGGGTTTAGCTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CAA 90 bp | ACACCAGCTAAACCCTCACAACATCCCTGTGAGGTAGGCAGGGTAGATGTTATTCATTTTGGACTGCAGTaGCTGCAGGAGCTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TPAKPSQHPCEVGRVDVIHFGLQ*LQELAW Trigger: CCAAGCCAGCTCCTGCAGCAACTGCAGTCCAAAATG...AATAACATCTACCCTGCCTACCTCACAGGGATGTTGTGAGGGTTTAGCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CAA 90 bp | GAAAGGCAAGTGCTGAGACCCGAATGCTCTGTTAGGAGTGAAGAAGAGCAAAAGGAGTTGCAGCCTTATTaGGGCCAGATACTGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ERQVLRPECSVRSEEEQKELQPY*GQILLV Trigger: CACAAGCAGTATCTGGCCCAAATAAGGCTGCAACTC...CTTTTGCTCTTCTTCACTCCTAACAGAGCATTCGGGTCTCAGCACTTGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CAA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAACATTTTGGACTGCAGTaGCTGCAGGAGCTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: ILSGMKVSESFSNVGYVEHFGLQ*LQELAW Trigger: CCAAGCCAGCTCCTGCAGCAACTGCAGTCCAAAATG...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS-3UTR CAA 90 bp | ATTTTAAGTGGCATGAAGGTTTCAGAAAGTTTTTCCAATGTTGGCTATGTGGAAGAGTTGCAGCCTTATTaGGGCCAGATACTGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILSGMKVSESFSNVGYVEELQPY*GQILLV Trigger: CACAAGCAGTATCTGGCCCAAATAAGGCTGCAACTC...TTCCACATAGCCAACATTGGAAAAACTTTCTGAAACCTTCATGCCACTTAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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| CDS CCA 72 bp | TCGGAGATAGAGCTGCAGGCGGTTTCCACCTCGGTCTaGCTCCACCCCTCATCCGAGGACGACTCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SEIELQAVSTSV*LHPSSEDDSSS Trigger: CGAGGAGGAGTCGTCCTCGGATGAGGGGTGGAGCCAGACCGAGGTGGAAACCGCCTGCAGCTCTATCTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS GCA 72 bp | TTGATAGGCGCCATCTTGGCCGGCTCCATTTTCTCTTaGGGCTCCTCAACCTCGGAGATAGAGCTGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LIGAILAGSIFS*GSSTSEIELQA Trigger: CGCCTGCAGCTCTATCTCCGAGGTTGAGGAGCCGCAAGAGAAAATGGAGCCGGCCAAGATGGCGCCTATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113495.9 |
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| CDS CCA 72 bp | CGGAGTTGCAGCCTTATTTGGGCCAGATACTGCTTGTaGGGGTGCTACAGGAGGAGTAGTTGGTCTACTACT | + |
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Preference number: 6 (lower is better) Translates to: RSCSLIWARYCL*GCYRRSSWSTT Trigger: AGTAGTAGACCAACTACTCCTCCTGTAGCACCCCCACAAGCAGTATCTGGCCCAAATAAGGCTGCAACTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055497.15 ENSMUST00000113495.9 |
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