Pregenerated sensors for TAF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023980Ensembl transcript IDs: ENSMUST00000067103.4, ENSMUST00000233121.2, ENSMUST00000233174.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGTGGAGCCTCTACCAGCTGCCTGGAAGCCAAGCATGGTGGCCTaGACCTATACCTGCAGCAGGTGGCAGGAAGGCACTGAGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KVEPLPAAWKPSMVA*TYTCSRWQEGTEPG Trigger: CCCAGGCTCAGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR CCA 90 bp | CCCTCCAGAGAATCAGCGGGGAAGGTGGAGCCTCTACCAGCTGCCTaGAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PSRESAGKVEPLPAA*KPSMVACTYTCSRW Trigger: CCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCTTCCCCGCTGATTCTCTGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR GCA 90 bp | CTCGGGTCACGAGAGGGACCTAGAAAGAAGAAGAACCACAGAGGCTaGTGTGGGCCCCTCCTGTTCTCCCAGGCACGAGCAGCCTACAGC | + |
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Preference number: 1 (lower is better) Translates to: LGSREGPRKKKNHRG*CGPLLFSQARAAYS Trigger: GCTGTAGGCTGCTCGTGCCTGGGAGAACAGGAGGGGCCCACAGCAGCCTCTGTGGTTCTTCTTCTTTCTAGGTCCCTCTCGTGACCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
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| 3UTR GCA 90 bp | CTTTCCCTCCAGAGAATCAGCGGGGAAGGTGGAGCCTCTACCAGCTaGCTGGAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LSLQRISGEGGASTS*LEAKHGGLHLYLQQ Trigger: CTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR GCA 90 bp | CTACCAGCTGCCTGGAAGCCAAGCATGGTGGCCTGCACCTATACCTaGAGCAGGTGGCAGGAAGGCACTGAGCCTGGGATACACACTGAA | + |
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Preference number: 1 (lower is better) Translates to: LPAAWKPSMVACTYT*SRWQEGTEPGIHTE Trigger: TTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR CCA 90 bp | GTGGAGGGTCTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTaGGCACGTAGCTTTCTACCAGAGCTGCATTTCACAGCTAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: VEGLSRVFSPPPSSR*ARSFLPELHFTARL Trigger: AAGCCTAGCTGTGAAATGCAGCTCTGGTAGAAAGCTACGTGCCCACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAGACCCTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR CCA 90 bp | GCCTGGAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTaGCAGGAAGGCACTGAGCCTGGGATACACACTGAATTCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: AWKPSMVACTYTCSR*QEGTEPGIHTEFWD Trigger: ATCCCAGAATTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR TCA 90 bp | CTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCATaGTTGATCAATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LPLPWPSRFQTNQVP*LINGVTSSPRHSCS Trigger: GCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATTGATCAATCATGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR TCA 90 bp | GGAGGGGAAATTCCTTGCGCTTGTTTCCAGGGCTGGAAGCATCCATaGCAAATCTGTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: GGEIPCACFQGWKHP*QICTCRLGSSPQTG Trigger: GCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAGCGCAAGGAATTTCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| 3UTR CCA 90 bp | AGCAGGTGGCAGGAAGGCACTGAGCCTGGGATACACACTGAATTCTaGGATAGCCTGGACTACAGAGAGAGCCTATCTCTGAAACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SRWQEGTEPGIHTEF*DSLDYRESLSLKQE Trigger: CTCCTGTTTCAGAGATAGGCTCTCTCTGTAGTCCAGGCTATCCCAGAATTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR CCA 90 bp | CTTCACGGTGCTTTAAGTCCATGGCTCCTTTTGAAGCCACAGGATTaGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: LHGALSPWLLLKPQD*FDSTVVSFNQMLVR Trigger: TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTTCAAAAGGAGCCATGGACTTAAAGCACCGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR TCA 90 bp | CAAGTCACAGGAAAAGCTGGGTACAGTGCTTCATTGCCTACCATTTaGGAGGCCCTATGTCTGAGTCATTTACAAAGTTTTTATTATGAA | + |
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Preference number: 1 (lower is better) Translates to: QVTGKAGYSASLPTI*EALCLSHLQSFYYE Trigger: TTCATAATAAAAACTTTGTAAATGACTCAGACATAGGGCCTCTCAAATGGTAGGCAATGAAGCACTGTACCCAGCTTTTCCTGTGACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGCAGACAAGCAGGCTaGAGCGGGCTGGAGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RGIQEGWKVHMAAFSAGHSRQAG*SGLEPA Trigger: GGCTGGCTCCAGCCCGCTCCAGCCTGCTTGTCTGCT...GTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGAGCCATAAGCTGCTACTAAAATaGCACAGCCTGGCCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PRGLEGTHGRLLGRAQSHKLLLK*HSLAQA Trigger: GGCCTGGGCCAGGCTGTGTCATTTTAGTAGCAGCTT...ATGGCTCTGTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGGTGGAGGGTCTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTGCATGGCCACTGTCATTaGTTGATCCTGACACCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GWGGGSQQGLLTPSVQQVHGHCH*LILTPL Trigger: CAAAGGTGTCAGGATCAATCAATGACAGTGGCCATG...CACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAGACCCTCCACCCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTGGCAGGAAGGCACCAGCAGCCGTCAGGATaGAGGAGGCATTCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: EAKHGGLHLYLQQVAGRHQQPSG*RRHSNP Trigger: TGGGTTGGAATGCCTCCTCCATCCTGACGGCTGCTG...GTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCGTTCTGCCTCTTCCCTaGCCCTCCAGGTTCCAAACG | + |
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Preference number: 2 (lower is better) Translates to: RRRSASSLALQVPNESSPVLPLP*PSRFQT Trigger: CGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAAC...GGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCGCCCTAGATCCAAGGTaGGCTGTGGGCCTGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RRRSASSLALQVPNESSPALDPR*AVGLFP Trigger: TGGAAACAGGCCCACAGCCCACCTTGGATCTAGGGC...GGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCAGTGCCCAGCAAGCTaGACCCACTGGGCAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: IGVVLPLPWPSRFQTNQVQCPAS*THWAAY Trigger: ATAGGCTGCCCAGTGGGTGCAGCTTGCTGGGCACTG...GACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTTATATCAGCGAGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCAAGCTGCTACTAAAATaGCACAGCCTGGCCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AFISARGIQEGWKVHMAAKLLLK*HSLAQA Trigger: GGCCTGGGCCAGGCTGTGTCATTTTAGTAGCAGCTT...GGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCTCGCTGATATAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGGTTCCTCTCTGGCAGCTGGGGCTGTaGACGCTGATGGTCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SRAGSIHDKSVPVGLVPLWQLGL*TLMVRD Trigger: GTCTCTGACCATCAGCGTGCACAGCCCCAGCTGCCA...GAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTATATCAGCGAGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCCCCATGATTGATCAATaGAGTCACCAGCAGTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: AFISARGIQEGWKVHMAAPMIDQ*SHQQSP Trigger: CGGGGACTGCTGGTGACTCCATTGATCAATCATGGG...GGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCTCGCTGATATAAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGCACACTGTTCCCAACGCCAGTGACAATGGTGCTGGAATTACAGATGTGCCTCTACCAGCTGCCTaGAAGCCAAGCATGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: TLHTVPNASDNGAGITDVPLPAA*KPSMVA Trigger: GGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGG...CACATCTGTAATTCCAGCACCATTGTCACTGGCGTTGGGAACAGTGTGCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGCAGGAAGGCACTGAGCCTGGGATACACACTGAATTCTGGGATAGCCTGATCCAAGGTGGGCTGTaGGCCTGTTTCCAACACAAT | + |
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Preference number: 2 (lower is better) Translates to: RWQEGTEPGIHTEFWDSLIQGGL*ACFQHN Trigger: ATTGTGTTGGAAACAGGCCCACAGCCCACCTTGGAT...CAGGCTATCCCAGAATTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTGTCCTCCAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGCCCTAGATCCAAGGTaGGCTGTGGGCCTGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: ISCPPIPDTELFPSRESAALDPR*AVGLFP Trigger: TGGAAACAGGCCCACAGCCCACCTTGGATCTAGGGC...CGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTGGAGGACAAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTGTCCTCCAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGCAGCAGCCGTCAGGATaGAGGAGGCATTCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: ISCPPIPDTELFPSRESAQQPSG*RRHSNP Trigger: TGGGTTGGAATGCCTCCTCCATCCTGACGGCTGCTG...CGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTGGAGGACAAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAACTCAGTATCCCAAATACTGGGATTGCAGGTATGTGCTACCACCACTCAACCTTGGGGTCCAGGTaGGAAGTGAGACCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LELSIPNTGIAGMCYHHSTLGSR*EVRPLC Trigger: GCAGAGAGGTCTCACTTCTCACCTGGACCCCAAGGT...TGAGTGGTGGTAGCACATACCTGCAATCCCAGTATTTGGGATACTGAGTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGAACCTTGGGGTCCAGGTaGGAAGTGAGACCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PQDWFDSTVVSFNQMLVRTLGSR*EVRPLC Trigger: GCAGAGAGGTCTCACTTCTCACCTGGACCCCAAGGT...TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR GCA 90 bp | CAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGGGAAGGTGGAGCGAAGTGAGACCTCTCTaGATTTATATCAGCGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QFQTQSSFPPENQRGRWSEVRPL*IYISER Trigger: CCTCTCGCTGATATAAATGCAGAGAGGTCTCACTTC...GCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCGTTCTGCCTCTTCCCTaGCCCTCCAGGTTCCAAACG | + |
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Preference number: 2 (lower is better) Translates to: KPQDWFDSTVVSFNQMLVVLPLP*PSRFQT Trigger: CGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAAC...GACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGACGAGCAGCCTACAGCTaGCAGGACACAGCCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: PQDWFDSTVVSFNQMLVRRAAYS*QDTATR Trigger: TCTAGTGGCTGTGTCCTGCCAGCTGTAGGCTGCTCG...TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTTGTCCTCCAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGAGGCACGAAGATTCATaGTTAGGGGGAAGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ISCPPIPDTELFPSRESARHEDS*LGGSVG Trigger: CCCCACACTTCCCCCTAATCATGAATCTTCGTGCCT...CGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTGGAGGACAAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR GCA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGAAGAACCACAGAGGCTaGTGTGGGCCCCTCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: QLIHVVSISMCPCHPSLEKNHRG*CGPLLF Trigger: GAACAGGAGGGGCCCACAGCAGCCTCTGTGGTTCTT...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCACCCATGATTGATCAATaGAGTCACCAGCAGTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: SHRIGLTPLWSALIKCWSPMIDQ*SHQQSP Trigger: CGGGGACTGCTGGTGACTCCATTGATCAATCATGGG...TGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGCACACTGTTCCCAACGCCAGTGACAATGGTGCTGGAATTACAGATGTGGGTTTGACTCCACTGTaGTCAGCTTTAATCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: TLHTVPNASDNGAGITDVGLTPL*SALIKC Trigger: GCATTTGATTAAAGCTGACCACAGTGGAGTCAAACC...CACATCTGTAATTCCAGCACCATTGTCACTGGCGTTGGGAACAGTGTGCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGTTGAAGCCACAGGATTaGTTTGACTCCACTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: QLIHVVSISMCPCHPSLELKPQD*FDSTVV Trigger: GACCACAGTGGAGTCAAACCAATCCTGTGGCTTCAA...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | CGCACAGAGGACACACTAACCACTAGGAGAAAATACTGTTTATACGGTATCTATGGCTGGAAGCATCCATaGCAAATCTGTACCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: RTEDTLTTRRKYCLYGIYGWKHP*QICTCR Trigger: CCTACAGGTACAGATTTGTCATGGATGCTTCCAGCC...ATAGATACCGTATAAACAGTATTTTCTCCTAGTGGTTAGTGTGTCCTCTGTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGAGATCAAGGCTACGGTTTGACTCCACTGTaGTCAGCTTTAATCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FDSTVVSFNQMLVRDQGYGLTPL*SALIKC Trigger: GCATTTGATTAAAGCTGACCACAGTGGAGTCAAACC...GTAGCCTTGATCTCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGGGCTGTGGGCCTGTTTCCAACACAATGAGATACATAGTCATTTTCAATTCAGCTTTAATCAAATaGTGGTCAGAGATCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KVGCGPVSNTMRYIVIFNSALIK*WSEIKA Trigger: AGCCTTGATCTCTGACCAGCATTTGATTAAAGCTGA...ATTGAAAATGACTATGTATCTCATTGTGTTGGAAACAGGCCCACAGCCCACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATACGGTATCTATCCCGCTATAAAAGGGTATATTTACATGTGTGTTTGGTTCCAAGTTCTGTGCTaGATTCATACATCATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: CLYGIYPAIKGYIYMCVWFQVLC*IHTSSV Trigger: AACAGATGATGTATGAATTCAGCACAGAACTTGGAA...CCAAACACACATGTAAATATACCCTTTTATAGCGGGATAGATACCGTATAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| 3UTR CCA 72 bp | AGGTGGAGCCTCTACCAGCTGCCTGGAAGCCAAGCATaGTGGCCTGCACCTATACCTGCAGCAGGTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RWSLYQLPGSQA*WPAPIPAAGGR Trigger: CCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR GCA 72 bp | GCCTGGAAGCCAAGCATGGTGGCCTGCACCTATACCTaGAGCAGGTGGCAGGAAGGCACTGAGCCTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: AWKPSMVACTYT*SRWQEGTEPGI Trigger: TATCCCAGGCTCAGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR GCA 72 bp | CCTCTACCAGCTGCCTGGAAGCCAAGCATGGTGGCCTaGACCTATACCTGCAGCAGGTGGCAGGAAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: PLPAAWKPSMVA*TYTCSRWQEGT Trigger: AGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR GCA 72 bp | CAGAGAATCAGCGGGGAAGGTGGAGCCTCTACCAGCTaGCTGGAAGCCAAGCATGGTGGCCTGCACCTATAC | + |
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Preference number: 3 (lower is better) Translates to: QRISGEGGASTS*LEAKHGGLHLY Trigger: GTATAGGTGCAGGCCACCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCTTCCCCGCTGATTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| 3UTR CCA 72 bp | CAGAGCTCTTTCCCTCCAGAGAATCAGCGGGGAAGGTaGAGCCTCTACCAGCTGCCTGGAAGCCAAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSFPPENQRGR*SLYQLPGSQAW Trigger: CCATGCTTGGCTTCCAGGCAGCTGGTAGAGGCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAGAGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | GGCAGGACACAGCCACTAGAGAGAAGCGGGTACGCGTaGGAGCCAAGGAAGAGAAGCAGAGGAAGCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRTQPLERSGYA*EPRKRSRGSLP Trigger: AGGAAGGCTTCCTCTGCTTCTCTTCCTTGGCTCCCACGCGTACCCGCTTCTCTCTAGTGGCTGTGTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | CTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTaGGCACGTAGCTTTCTACCAGAGCTGCATTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LSRVFSPPPSSR*ARSFLPELHFT Trigger: TGTGAAATGCAGCTCTGGTAGAAAGCTACGTGCCCACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | CCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTaGCAGGAAGGCACTGAGCCTGGGATACACACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSMVACTYTCSR*QEGTEPGIHTE Trigger: TTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR TCA 72 bp | CCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCATaGTTGATCAATGGAGTCACCAGCAGTCCCCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PWPSRFQTNQVP*LINGVTSSPRH Trigger: GTGCCGGGGACTGCTGGTGACTCCATTGATCAATCATGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTGGCAGGAAGGCACGACAACTTATCCACGTaGTGTCAATTTCCATGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EAKHGGLHLYLQQVAGRHDNLST*CQFPCV Trigger: GACACATGGAAATTGACACAACGTGGATAAGTTGTC...GTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR TCA 72 bp | GGTCAGAGATCAAGGCTACCCCATGGCCACTGTCATTaGTTGATCCTGACACCTTTGTTCCTAGCTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQRSRLPHGHCH*LILTPLFLAPG Trigger: GCCAGGAGCTAGGAACAAAGGTGTCAGGATCAATCAATGACAGTGGCCATGGGGTAGCCTTGATCTCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | CAGGTTCCAAACGAATCAAGTCCCATGATTGATCAATaGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QVPNESSPMIDQ*SHQQSPAQLQQ Trigger: CTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATTGATCAATCATGGGACTTGATTCGTTTGGAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | CAGGAAGGCACTGAGCCTGGGATACACACTGAATTCTaGGATAGCCTGGACTACAGAGAGAGCCTATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QEGTEPGIHTEF*DSLDYRESLSL Trigger: CAGAGATAGGCTCTCTCTGTAGTCCAGGCTATCCCAGAATTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCACTGTCATTGATTGATCCTGACACCTTTGTTCCTAGCTCCTGGCAGCCCCCATGGCCACTGTCATaGATTGATCCTGACACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WPLSLIDPDTFVPSSWQPPWPLS*IDPDTF Trigger: AAAGGTGTCAGGATCAATCAATGACAGTGGCCATGG...GGGCTGCCAGGAGCTAGGAACAAAGGTGTCAGGATCAATCAATGACAGTGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR TCA 72 bp | ATTCCTTGCGCTTGTTTCCAGGGCTGGAAGCATCCATaGCAAATCTGTACCTGTAGGCTTGGTTCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IPCACFQGWKHP*QICTCRLGSSP Trigger: GGGAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAGCGCAAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| 3UTR CCA 72 bp | GGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTaGTCAGAGATCAAGGCTACCCCATGGCCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLTPLWSALIKC*SEIKATPWPLS Trigger: TGACAGTGGCCATGGGGTAGCCTTGATCTCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR TCA 72 bp | TTTTCAATCCACTCAGCAGGAACCTTGGGGTCCAGGTaGGAAGTGAGACCTCTCTGCATTTATATCAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSIHSAGTLGSR*EVRPLCIYISE Trigger: CTCGCTGATATAAATGCAGAGAGGTCTCACTTCTCACCTGGACCCCAAGGTTCCTGCTGAGTGGATTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR GCA 72 bp | ATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATaGTGGTCAGAGATCAAGGCTACCCCATGGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: IGLTPLWSALIK*WSEIKATPWPL Trigger: CAGTGGCCATGGGGTAGCCTTGATCTCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGACCATGGCCACTGTCATaGATTGATCCTGACACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQDWFDSTVVSFNQMLVRPWPLS*IDPDTF Trigger: AAAGGTGTCAGGATCAATCAATGACAGTGGCCATGG...TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR GCA 72 bp | GTGTTTAAAGCAAGTCACAGGAAAAGCTGGGTACAGTaGTTCATTGCCTACCATTTGAGAGGCCCTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFKASHRKSWVQ*FIAYHLRGPMS Trigger: AGACATAGGGCCTCTCAAATGGTAGGCAATGAAGCACTGTACCCAGCTTTTCCTGTGACTTGCTTTAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
||
| 3UTR CCA 72 bp | GCAGAAAACGTGTTTAAAGCAAGTCACAGGAAAAGCTaGGTACAGTGCTTCATTGCCTACCATTTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AENVFKASHRKS*VQCFIAYHLRG Trigger: GCCTCTCAAATGGTAGGCAATGAAGCACTGTACCCAGCTTTTCCTGTGACTTGCTTTAAACACGTTTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
||
| 3UTR TCA 72 bp | GCTGGGGCTTACTTACTATATAATCCAGGCTGGTCTTaGACTCAGTATCCCAAATACTGGGATTGCAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AGAYLLYNPGWS*TQYPKYWDCRY Trigger: ATACCTGCAATCCCAGTATTTGGGATACTGAGTTCAAGACCAGCCTGGATTATATAGTAAGTAAGCCCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
||
| 3UTR CCA 72 bp | TTAATCAAATGCTGGTCAGAGATCAAGGCTACCCCATaGCCACTGTCATTGATTGATCCTGACACCTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LIKCWSEIKATP*PLSLIDPDTFV Trigger: AACAAAGGTGTCAGGATCAATCAATGACAGTGGCCATGGGGTAGCCTTGATCTCTGACCAGCATTTGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CCA 72 bp | GCTTTAAGTCCATGGCTCCTTTTGAAGCCACAGGATTaGTTTGACTCCACTGTGGTCAGCTTTAATCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: ALSPWLLLKPQD*FDSTVVSFNQM Trigger: CATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTTCAAAAGGAGCCATGGACTTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR TCA 72 bp | TATATTTACATGTGTGTTTGGTACATAAAACCATACTaGCTCATCAGGAGCTTCGGGGAAAGGCCAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YIYMCVWYIKPY*LIRSFGERPES Trigger: GCTCTCTGGCCTTTCCCCGAAGCTCCTGATGAGTCAGTATGGTTTTATGTACCAAACACACATGTAAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGGCCCCTCCTGTTCTCCCAGGCACGAGCAGCCTACAGCTGGCAGGACAGGGTGGGGCCGGTTCTaGCCTGCAGTGAGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGPSCSPRHEQPTAGRTGWGRF*PAVRAL Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGGCCCCACCC...TGTCCTGCCAGCTGTAGGCTGCTCGTGCCTGGGAGAACAGGAGGGGCCCACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | AATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAGCACGGCCAAGGGGACGGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NGVTSSPRHSCSSTAKGTGSALQ*GPWGSL Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...CGTCCCCTTGGCCGTGCTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACGGGTGGGGCCGGTTCTaGCCTGCAGTGAGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGIQEGWKVHMAAFSAGHGWGRF*PAVRAL Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGGCCCCACCC...GTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGCACGCTGATGGTCAGAGAGGGTGGGGCCGGTTCTaGCCTGCAGTGAGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVPLPRLAAGAVHADGQRGWGRF*PAVRAL Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGGCCCCACCC...TCTCTGACCATCAGCGTGCACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCGGCAGGGCACAGAGCCATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCTCCACGTCTCGTCTCTaGGATGCGGCCTTCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FSAGHRAIGVVLPLPWPSSTSRL*DAAFSR Trigger: TCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGA...GGAGGGCCAGGGAAGAGGCAGAACGACGCCTATGGCTCTGTGCCCTGCCGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCAGGGCCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVVLPLPWPSRFQTNQVPGPVLP*SEGLGG Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGGCCC...TGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCGGGCCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRRSASSLALQVPNESSPGPVLP*SEGLGG Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGGCCC...GGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGGCAGCCTATTCCTACCAAGGAGCAGACAAGCAGGCTGGAGCGGGCTGGCCTCGCCATTCCGGCTaGCGGACAAGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HWAAYSYQGADKQAGAGWPRHSG*RTRRSS Trigger: AGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGG...CCAGCCCGCTCCAGCCTGCTTGTCTGCTCCTTGGTAGGAATAGGCTGCCCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGGTGGAGGGTCTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTGGGAAACTCAGGAAAATaGCTGGGGATGTGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWGGGSQQGLLTPSVQQVGNSGK*LGMCGG Trigger: CCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCC...CACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAGACCCTCCACCCCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | GTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGCACGCTTCCACGTCTCGTCTCTaGGATGCGGCCTTCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VPVGLVPLPRLAAGAVHASTSRL*DAAFSR Trigger: TCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGA...AGCGTGCACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCTGTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGGGCCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QICTCRLGSSPQTGSWGCGPVLP*SEGLGG Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGGCCC...ACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGAGCCATCGATGTCCGACAGTGTaGGCTGGGTCCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGLEGTHGRLLGRAQSHRCPTV*AGSWLC Trigger: ACACAGCCAGGACCCAGCCCACACTGTCGGACATCG...ATGGCTCTGTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | GTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGCACGCTCGATGTCCGACAGTGTaGGCTGGGTCCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPVGLVPLPRLAAGAVHARCPTV*AGSWLC Trigger: ACACAGCCAGGACCCAGCCCACACTGTCGGACATCG...AGCGTGCACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGGTGGAGGGTCTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTGTCCTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWGGGSQQGLLTPSVQQVSLKRL*VSPVLA Trigger: GGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGA...CACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAGACCCTCCACCCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTGGCAGGAAGGCACTCCACGTCTCGTCTCTaGGATGCGGCCTTCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EAKHGGLHLYLQQVAGRHSTSRL*DAAFSR Trigger: TCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGA...GTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGTGGAGGGTCTCAGCAGGGTCTTCTCACCCCCTCCGTCCAGCAGGTGTGGGTCCTGGCTGTGTaGTCACAGTATGACTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGGSQQGLLTPSVQQVWVLAV*SQYDLA Trigger: TGCTAAGTCATACTGTGAGCACACAGCCAGGACCCA...CACCTGCTGGACGGAGGGGGTGAGAAGACCCTGCTGAGACCCTCCACCCCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAGCACGGCCAAGGGGACGTCTGTTTGCTCCTCCTaGTCCGAGGAGTCGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGVTSSPRHSCSSTAKGTSVCSS*SEESVS Trigger: AGAGACCGACTCCTCGGAGCAGGAGGAGCAAACAGA...CGTCCCCTTGGCCGTGCTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCGGGATGTGTGGCGGGTaGGGCCGGTTCTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGVVLPLPWPSRFQTNQVGMCGG*GRFCPA Trigger: TGCAGGGCAGAACCGGCCCCACCCGCCACACATCCC...GACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCGGCAGGGCACAGAGCCATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCGGTATGTCGGAGTTTTaGTGTAGGTGTGGGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSAGHRAIGVVLPLPWPSGMSEF*CRCGDP Trigger: CGGATCCCCACACCTACATCAAAACTCCGACATACC...GGAGGGCCAGGGAAGAGGCAGAACGACGCCTATGGCTCTGTGCCCTGCCGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | GATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGAGCTCTTCCTACGGATCTTaGGCTTCTTCACGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPRGLEGTHGRLLGRAQSSSYGS*ASSRAA Trigger: TGCGGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGA...GCTCTGTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGAGCCGGTATGTCGGAGTTTTaGTGTAGGTGTGGGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQEGWKVHMAAFSAGHRAGMSEF*CRCGDP Trigger: CGGATCCCCACACCTACATCAAAACTCCGACATACC...GGCTCTGTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | GTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGCACGCTGGTATGTCGGAGTTTTaGTGTAGGTGTGGGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPVGLVPLPRLAAGAVHAGMSEF*CRCGDP Trigger: CGGATCCCCACACCTACATCAAAACTCCGACATACC...AGCGTGCACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | AATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAGCACGGCCAAGGGGACGGCAGGGTTAGTGGATTaGTTACTTCCCGGTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGVTSSPRHSCSSTAKGTAGLVD*LLPGLV Trigger: AACGAGACCGGGAAGTAAGCAATCCACTAACCCTGC...CGTCCCCTTGGCCGTGCTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAGCACGGCCAAGGGGACGTGGGTCCTGGCTGTGTaGTCACAGTATGACTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGVTSSPRHSCSSTAKGTWVLAV*SQYDLA Trigger: TGCTAAGTCATACTGTGAGCACACAGCCAGGACCCA...CGTCCCCTTGGCCGTGCTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAAGCATGGTGGCCTGCACCTATACCTGCAGCAGGTGGCAGGAAGGCACAAGGAGGAGCTCTGCTaGAGAACAGAAGCGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAKHGGLHLYLQQVAGRHKEELC*RTEALS Trigger: GGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTT...GTGCCTTCCTGCCACCTGCTGCAGGTATAGGTGCAGGCCACCATGCTTGGCTTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACATTGGTCACTGGAGGTaGAGTGATGACCATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGIQEGWKVHMAAFSAGHIGHWR*SDDHPL Trigger: CAGAGGATGGTCATCACTGCACCTCCAGTGACCAAT...GTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCATGATTGATCAATGGAGTCACCAGCAGTCCCCGGCACAGTTGCAGCAGGGCCTTGGGGGTCACTaGCTGATTGGTCACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPMIDQWSHQQSPAQLQQGLGGH*LIGHWR Trigger: CCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCC...CTGCTGCAACTGTGCCGGGGACTGCTGGTGACTCCATTGATCAATCATGGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGGCAGCCTATTCCTACCAAGGAGCAGACAAGCAGGCTGGAGCGGGCTGGTCGGTCTCTTCCATCTaGTGTATCTCCAGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HWAAYSYQGADKQAGAGWSVSSI*CISSSE Trigger: TTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGA...CCAGCCCGCTCCAGCCTGCTTGTCTGCTCCTTGGTAGGAATAGGCTGCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | GTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTGCACGCTTCGGTCTCTTCCATCTaGTGTATCTCCAGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPVGLVPLPRLAAGAVHASVSSI*CISSSE Trigger: TTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGA...AGCGTGCACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTGCACACTGTTCCCAACGCCAGTGACAATGGTGCTGGAATTACAGATGTGATGGCTGGGGATGTGTaGCGGGTGGGGCCGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVPNASDNGAGITDVMAGDV*RVGPVL Trigger: CAGAACCGGCCCCACCCGCCACACATCCCCAGCCAT...CACATCTGTAATTCCAGCACCATTGTCACTGGCGTTGGGAACAGTGTGCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCACTCAGGAAAATGGCTaGGGATGTGTGGCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGVVLPLPWPSRFQTNQVTQENG*GCVAGG Trigger: CCCACCCGCCACACATCCCCAGCCATTTTCCTGAGT...GACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CAA 72 bp | GCTGGAAGCATCCATGACAAATCTGTACCTGTAGGCTaGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSIHDKSVPVG*VPLPRLAAGAV Trigger: CACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | CAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGGGAAGGTGGAGCTCTGTTTGCTCCTCCTaGTCCGAGGAGTCGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFQTQSSFPPENQRGRWSSVCSS*SEESVS Trigger: AGAGACCGACTCCTCGGAGCAGGAGGAGCAAACAGA...GCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCATTCTCTGTATCTGTTTaGTCCTCCTGCTCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVVLPLPWPSRFQTNQVPFSVSV*SSCSEE Trigger: CTCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAA...TGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGGCAGGAAGGCACTGAGCCTGGGATACACACTGAATTCTGGGATAGCCTGAAGGAGGAGCTCTGCTaGAGAACAGAAGCGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWQEGTEPGIHTEFWDSLKEELC*RTEALS Trigger: GGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTT...CAGGCTATCCCAGAATTCAGTGTGTATCCCAGGCTCAGTGCCTTCCTGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGTCATTGATTGATCCTGACACCTTTGTTCCTAGCTCCTGGCAGCCCACTCAGGAAAATGGCTaGGGATGTGTGGCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WPLSLIDPDTFVPSSWQPTQENG*GCVAGG Trigger: CCCACCCGCCACACATCCCCAGCCATTTTCCTGAGT...GGGCTGCCAGGAGCTAGGAACAAAGGTGTCAGGATCAATCAATGACAGTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATACATAGTCATTTTCAATCCACTCAGCAGGAACCTTGGGGTCCAGGTGGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MRYIVIFNPLSRNLGVQVGSALQ*GPWGSL Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...CACCTGGACCCCAAGGTTCCTGCTGAGTGGATTGAAAATGACTATGTATCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGGGGATGTGTGGCGGGTaGGGCCGGTTCTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLIHVVSISMCPCHPSLEGMCGG*GRFCPA Trigger: TGCAGGGCAGAACCGGCCCCACCCGCCACACATCCC...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAATGGCTGGGGATGTGTaGCGGGTGGGGCCGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHRIGLTPLWSALIKCWSMAGDV*RVGPVL Trigger: CAGAACCGGCCCCACCCGCCACACATCCCCAGCCAT...TGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | CAAATCTGTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGGCAGCTGGGGCTGTTGTGTGCTCACAGTATaGCTTAGCACTTCTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QICTCRLGSSPQTGSWGCCVLTV*LSTSPD Trigger: ATCGGGAGAAGTGCTAAGTCATACTGTGAGCACACA...ACAGCCCCAGCTGCCAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCGAGCTCACAACCACTTaGAGGGTCCTCCTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPQDWFDSTVVSFNQMLVELTTT*RVLLRA Trigger: GGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTC...GACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGATACATAGTCATTTTCAATCCACTCAGCAGGAACCTTGGGGTCCAGGTGGAGCTCACAACCACTTaGAGGGTCCTCCTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MRYIVIFNPLSRNLGVQVELTTT*RVLLRA Trigger: GGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTC...CACCTGGACCCCAAGGTTCCTGCTGAGTGGATTGAAAATGACTATGTATCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | CAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGGGAAGGTGGAGCTTCTCTGTATCTGTTTaGTCCTCCTGCTCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFQTQSSFPPENQRGRWSFSVSV*SSCSEE Trigger: CTCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAA...GCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGACCTCGCCATTCCGGCTaGCGGACAAGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQDWFDSTVVSFNQMLVRPRHSG*RTRRSS Trigger: AGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGG...TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCTGTGTGCTCACAGTATaGCTTAGCACTTCTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGVVLPLPWPSRFQTNQVCVLTV*LSTSPD Trigger: ATCGGGAGAAGTGCTAAGTCATACTGTGAGCACACA...GACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCGACATTTCTTGTCCTCCAATTCCAGACACAGAGCTCTTTCCCTCCAGACGATGTCCGACAGTGTaGGCTGGGTCCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLDISCPPIPDTELFPSRRCPTV*AGSWLC Trigger: ACACAGCCAGGACCCAGCCCACACTGTCGGACATCG...TCTGGAGGGAAAGAGCTCTGTGTCTGGAATTGGAGGACAAGAAATGTCGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAACTCAGTATCCCAAATACTGGGATTGCAGGTATGTGCTACCACCACTCAGGCCTTGGGGGTCACTaGCTGATTGGTCACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELSIPNTGIAGMCYHHSGLGGH*LIGHWR Trigger: CCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCC...TGAGTGGTGGTAGCACATACCTGCAATCCCAGTATTTGGGATACTGAGTTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
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| CDS-3UTR CCA 90 bp | TTCCTTGCGCTTGTTTCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTAACTCAGGAAAATGGCTaGGGATGTGTGGCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALVSRAGSIHDKSVPVTQENG*GCVAGG Trigger: CCCACCCGCCACACATCCCCAGCCATTTTCCTGAGT...TACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAGCGCAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS-3UTR CCA 90 bp | ACCTTGCACACTGTTCCCAACGCCAGTGACAATGGTGCTGGAATTACAGATGTGTCTTCCTACGGATCTTaGGCTTCTTCACGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVPNASDNGAGITDVSSYGS*ASSRAA Trigger: TGCGGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGA...CACATCTGTAATTCCAGCACCATTGTCACTGGCGTTGGGAACAGTGTGCAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCTTGGGGGTCACTGGCTaGTTGGTCACTGGAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPQDWFDSTVVSFNQMLVLGVTG*LVTGGA Trigger: TGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAA...GACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGGACACACTAACCACTAGGAGAAAATACTGTTTATACGGTATCTATCCCGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TEDTLTTRRKYCLYGIYPGSALQ*GPWGSL Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...GGGATAGATACCGTATAAACAGTATTTTCTCCTAGTGGTTAGTGTGTCCTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTGTCCTCCAATTCCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGATAGGGGTTATCGATaGCGCTCTCCTCGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISCPPIPDTELFPSRESADRGYR*RSPRHS Trigger: GGAATGGCGAGGAGAGCGTCATCGATAACCCCTATC...CGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGGAATTGGAGGACAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR GCA 90 bp | GCGCTTGTTTCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGTTCTCTGTATCTGTTTaGTCCTCCTGCTCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALVSRAGSIHDKSVPVGLFSVSV*SSCSEE Trigger: CTCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAA...CAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| 3UTR CAA 72 bp | TGGTCAGAGATCAAGGCTACCCCATGGCCACTGTCATaGATTGATCCTGACACCTTTGTTCCTAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSEIKATPWPLS*IDPDTFVPSSW Trigger: CCAGGAGCTAGGAACAAAGGTGTCAGGATCAATCAATGACAGTGGCCATGGGGTAGCCTTGATCTCTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGTTGGGGGTCACTGGCTaGTTGGTCACTGGAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLIHVVSISMCPCHPSLELGVTG*LVTGGA Trigger: TGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAA...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATACATAGTCATTTTCAATCCACTCAGCAGGAACCTTGGGGTCCAGGTGGATAGGGGTTATCGATaGCGCTCTCCTCGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: MRYIVIFNPLSRNLGVQVDRGYR*RSPRHS Trigger: GGAATGGCGAGGAGAGCGTCATCGATAACCCCTATC...CACCTGGACCCCAAGGTTCCTGCTGAGTGGATTGAAAATGACTATGTATCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGAGGAAACTCAGGAAAATaGCTGGGGATGTGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQDWFDSTVVSFNQMLVRGNSGK*LGMCGG Trigger: CCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCC...TCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGCGCTTGTTTCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTATCCTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLALVSRAGSIHDKSVPVSLKRL*VSPVLA Trigger: GGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGA...TACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAGCGCAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTTTCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGGTTATTGGTCACTGGAGGTaGAGTGATGACCATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSRAGSIHDKSVPVGLVIGHWR*SDDHPL Trigger: CAGAGGATGGTCATCACTGCACCTCCAGTGACCAAT...AACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTATACGGTATCTATCCCGCTATAAAAGGGTATATTTACATGTGTGTTTGGGGGATGTGTGGCGGGTaGGGCCGGTTCTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLYGIYPAIKGYIYMCVWGMCGG*GRFCPA Trigger: TGCAGGGCAGAACCGGCCCCACCCGCCACACATCCC...CCAAACACACATGTAAATATACCCTTTTATAGCGGGATAGATACCGTATAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGAGGTACGTGTTATATCTTCTTCTGTCTTCCAAGTTCTGTGCTGAATGGAAACTCAGGAAAATaGCTGGGGATGTGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGGTCYIFFCLPSSVLNGNSGK*LGMCGG Trigger: CCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCC...ATTCAGCACAGAACTTGGAAGACAGAAGAAGATATAACACGTACCTCCCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| 3UTR CAA 72 bp | AGTACTCTTCACGGTGCTTTAAGTCCATGGCTCCTTTaGAAGCCACAGGATTGGTTTGACTCCACTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: STLHGALSPWLL*KPQDWFDSTVV Trigger: GACCACAGTGGAGTCAAACCAATCCTGTGGCTTCAAAAGGAGCCATGGACTTAAAGCACCGTGAAGAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CAA 72 bp | GAGGAGGCATTCCAACCCAAGGACAACTTATCCACGTaGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEAFQPKDNLST*CQFPCVPVILP Trigger: AGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTGTCCTTGGGTTGGAATGCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| 3UTR CAA 72 bp | AGGCTGGTCTTGAACTCAGTATCCCAAATACTGGGATaGCAGGTATGTGCTACCACCACTCAGCATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLVLNSVSQILG*QVCATTTQHAE Trigger: TTCTGCATGCTGAGTGGTGGTAGCACATACCTGCAATCCCAGTATTTGGGATACTGAGTTCAAGACCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067103.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTATACGGTATCTATCCCGCTATAAAAGGGTATATTTACATGTGTGTTTGGATGGCTGGGGATGTGTaGCGGGTGGGGCCGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLYGIYPAIKGYIYMCVWMAGDV*RVGPVL Trigger: CAGAACCGGCCCCACCCGCCACACATCCCCAGCCAT...CCAAACACACATGTAAATATACCCTTTTATAGCGGGATAGATACCGTATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CCA 90 bp | TTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAGAGATCAAGGCTACTCCTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FDSTVVSFNQMLVRDQGYSLKRL*VSPVLA Trigger: GGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGA...GTAGCCTTGATCTCTGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGGCAGGGTTAGTGGATTaGTTACTTCCCGGTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLIHVVSISMCPCHPSLEAGLVD*LLPGLV Trigger: AACGAGACCGGGAAGTAAGCAATCCACTAACCCTGC...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCTCGGTCTCTTCCATCTaGTGTATCTCCAGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPQDWFDSTVVSFNQMLVSVSSI*CISSSE Trigger: TTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGA...GACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGACACACTAACCACTAGGAGAAAATACTGTTTATACGGTATCTATCCCTCTGTTTGCTCCTCCTaGTCCGAGGAGTCGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEDTLTTRRKYCLYGIYPSVCSS*SEESVS Trigger: AGAGACCGACTCCTCGGAGCAGGAGGAGCAAACAGA...GGGATAGATACCGTATAAACAGTATTTTCTCCTAGTGGTTAGTGTGTCCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGGGCTGTGGGCCTGTTTCCAACACAATGAGATACATAGTCATTTTCAATATTGGTCACTGGAGGTaGAGTGATGACCATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVGCGPVSNTMRYIVIFNIGHWR*SDDHPL Trigger: CAGAGGATGGTCATCACTGCACCTCCAGTGACCAAT...ATTGAAAATGACTATGTATCTCATTGTGTTGGAAACAGGCCCACAGCCCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGGGCTGTGGGCCTGTTTCCAACACAATGAGATACATAGTCATTTTCAATTGTGTGCTCACAGTATaGCTTAGCACTTCTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVGCGPVSNTMRYIVIFNCVLTV*LSTSPD Trigger: ATCGGGAGAAGTGCTAAGTCATACTGTGAGCACACA...ATTGAAAATGACTATGTATCTCATTGTGTTGGAAACAGGCCCACAGCCCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR GCA 90 bp | ATTATTCGCACAGAGGACACACTAACCACTAGGAGAAAATACTGTTTATACGGTTGGGTCCTGGCTGTGTaGTCACAGTATGACTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIRTEDTLTTRRKYCLYGWVLAV*SQYDLA Trigger: TGCTAAGTCATACTGTGAGCACACAGCCAGGACCCA...ACCGTATAAACAGTATTTTCTCCTAGTGGTTAGTGTGTCCTCTGTGCGAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS-3UTR GCA 90 bp | TCCCGCTATAAAAGGGTATATTTACATGTGTGTTTGGTACATAAAACCATACTGGCAGGGTTAGTGGATTaGTTACTTCCCGGTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRYKRVYLHVCLVHKTILAGLVD*LLPGLV Trigger: AACGAGACCGGGAAGTAAGCAATCCACTAACCCTGC...CAGTATGGTTTTATGTACCAAACACACATGTAAATATACCCTTTTATAGCGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| 3UTR CAA 72 bp | CTATCCCGCTATAAAAGGGTATATTTACATGTGTGTTaGGTACATAAAACCATACTGACTCATCAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRYKRVYLHVC*VHKTILTHQEL Trigger: AAGCTCCTGATGAGTCAGTATGGTTTTATGTACCAAACACACATGTAAATATACCCTTTTATAGCGGGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS CCA 90 bp | CGGGTGGGGCCGGTTCTGCCCTGCAGTGAGGGCCTTGGGGGTCACTaGCTGATTGGTCACTGGAGGTGCAGTGATGACCATCCTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVGPVLPCSEGLGGH*LIGHWRCSDDHPLR Trigger: TCTCAGAGGATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACCGGCCCCACCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS GCA 90 bp | ACGCTCTCCTCGCCATTCCGGCTGCCGGACAAGGAGGAGCTCTGCTaGAGAACAGAAGCGCTCTCCTTCTCAGCTCCGGAATCGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSSPFRLPDKEELC*RTEALSFSAPESSV Trigger: CACGGACGATTCCGGAGCTGAGAAGGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACTGGGTCTCGCCTGTCTaGGCCATGAAGCGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGIQEGWKVHMAAFSAGHWVSPV*AMKRVS Trigger: ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCA...GTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGATCCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS GCA 90 bp | GGCCATGAAGCGGGTGAGTGCTCGCTCCACGTCTCGTCTCTGAGATaGGGCCTTCTCCCGAAGGATCTGGTAGTCAGACACTGGCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GHEAGECSLHVSSLR*GLLPKDLVVRHWLT Trigger: CGTGAGCCAGTGTCTGACTACCAGATCCTTCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGCACTCACCCGCTTCATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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| CDS GCA 90 bp | ATGACGCTCTCCTCGCCATTCCGGCTGCCGGACAAGGAGGAGCTCTaGTGCAGAACAGAAGCGCTCTCCTTCTCAGCTCCGGAATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTLSSPFRLPDKEEL*CRTEALSFSAPESS Trigger: GGACGATTCCGGAGCTGAGAAGGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CAA 90 bp | CCAGACACAGAGCTCTTTCCCTCCAGAGAATCAGCGGGGAAGGTGGAGCCTCTAGGAGCTCACAACCACTaGCAGGGTCCTCCTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PDTELFPSRESAGKVEPLGAHNH*QGPPPG Trigger: GCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCC...TAGAGGCTCCACCTTCCCCGCTGATTCTCTGGAGGGAAAGAGCTCTGTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGAGGGCTGGAAGGTACACATGGCCGCCTTCTCGGCAGGGCACAGAGCCTTCTTCCTACGGATCTaGGGCTTCTTCACGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IQEGWKVHMAAFSAGHRAFFLRI*GFFTGR Trigger: GCGGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGAA...GGCTCTGTGCCCTGCCGAGAAGGCGGCCATGTGTACCTTCCAGCCCTCTTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS TCA 90 bp | TACGGATCTTGGGCTTCTTCACGGGCCGCAGATAGGGGTTATCGATaGCGCTCTCCTCGCCATTCCGGCTGCCGGACAAGGAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YGSWASSRAADRGYR*RSPRHSGCRTRRSS Trigger: AGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCATCGATAACCCCTATCTGCGGCCCGTGAAGAAGCCCAAGATCCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS GCA 90 bp | GAAAAGACTCTGGGTCTCGCCTGTCTTGGCCATGAAGCGGGTGAGTaGTCGCTCCACGTCTCGTCTCTGAGATGCGGCCTTCTCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKTLGLACLGHEAGE*SLHVSSLRCGLLPK Trigger: CTTCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGCACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS-3UTR CAA 90 bp | ACTGACTCATCAGGAGCTTCGGGGAAAGGCCAGAGAGCCTGGGGTGGGAGAGGGGTGCTGACATCATCCTaGAAAAGACTCTGGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TDSSGASGKGQRAWGGRGVLTSS*KRLWVS Trigger: CGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCAC...CCCTCTCCCACCCCAGGCTCTCTGGCCTTTCCCCGAAGCTCCTGATGAGTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
||
| CDS-3UTR CAA 90 bp | CGCACCACATTTCCTCCATTCACAGTCAAGCACAACAGGCTGTCTTCACACAAAGGAGCTCACAACCACTaGCAGGGTCCTCCTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTTFPPFTVKHNRLSSHKGAHNH*QGPPPG Trigger: GCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCC...TTTGTGTGAAGACAGCCTGTTGTGCTTGACTGTGAATGGAGGAAATGTGGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCAGTGCTGACATCATCCTaGAAAAGACTCTGGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GVVLPLPWPSRFQTNQVPVLTSS*KRLWVS Trigger: CGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCAC...TGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS CCA 90 bp | AAGCCCATTTCAACCAATGTGACCACGATGTCCGACAGTGTGGGCTaGGTCCTGGCTGTGTGCTCACAGTATGACTTAGCACTTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KPISTNVTTMSDSVG*VLAVCSQYDLALLP Trigger: CGGGAGAAGTGCTAAGTCATACTGTGAGCACACAGCCAGGACCCAGCCCACACTGTCGGACATCGTGGTCACATTGGTTGAAATGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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| CDS CCA 90 bp | GCAGCGATCAAAGGAAAAGTGCTGACATCATCCTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCCATGAAGCGGGTGAGTGCTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAIKGKVLTSSLKRL*VSPVLAMKRVSARS Trigger: GGAGCGAGCACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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| CDS-3UTR CAA 90 bp | ATAGGCGTCGTTCTGCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCGTTCTCTGTATCTGTTaGCTCCTCCTGCTCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IGVVLPLPWPSRFQTNQVVLCIC*LLLLRG Trigger: TCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAAC...GACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGCAGAACGACGCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS TCA 90 bp | ACAGAAGCGCTCTCCTTCTCAGCTCCGGAATCGTCCGTGCTGATATaGAGAGCGTTGTTCTCTGTATCTGTTTGCTCCTCCTGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEALSFSAPESSVLI*RALFSVSVCSSCSE Trigger: CTCGGAGCAGGAGGAGCAAACAGATACAGAGAACAACGCTCTTCATATCAGCACGGACGATTCCGGAGCTGAGAAGGAGAGCGCTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | GGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGAGCAGGGTTAGTGGATaGCTTACTTCCCGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GSIHDKSVPVGLVPLPRLSRVSG*LTSRSR Trigger: ACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCT...CAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTTCCCTGGCCCTCCAGGTTCCAAACGAATCAAGTCCCATGATTGATCAATCCTCTGAGACCGTTTaGCATAGGCAGGTAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSLALQVPNESSPMIDQSSETV*HRQVEC Trigger: ACACTCTACCTGCCTATGCAAAACGGTCTCAGAGGA...TTGATCAATCATGGGACTTGATTCGTTTGGAACCTGGAGGGCCAGGGAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | GGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGGTTCCTCTCCCCAGACTGTCCTCTGAGACCGTTTaGCATAGGCAGGTAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSIHDKSVPVGLVPLPRLSSETV*HRQVEC Trigger: ACACTCTACCTGCCTATGCAAAACGGTCTCAGAGGA...CAGTCTGGGGAGAGGAACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS-3UTR CAA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGTGGGTCTCGCCTGTCTaGGCCATGAAGCGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QLIHVVSISMCPCHPSLEWVSPV*AMKRVS Trigger: ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCA...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | AGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCATTCTTCCTACGGATCTaGGGCTTCTTCACGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SHRIGLTPLWSALIKCWSFFLRI*GFFTGR Trigger: GCGGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGAA...TGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | CTTGTTTCCAGGGCTGGAAGCATCCATGACAAATCTGTACCTGTAGGCTTGGTTGTTCTCTGTATCTGTTaGCTCCTCCTGCTCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSRAGSIHDKSVPVGLVVLCIC*LLLLRG Trigger: TCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAAC...AACCAAGCCTACAGGTACAGATTTGTCATGGATGCTTCCAGCCCTGGAAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS-3UTR CAA 90 bp | AGCCACAGGATTGGTTTGACTCCACTGTGGTCAGCTTTAATCAAATGCTGGTCAAGCAGGGTTAGTGGATaGCTTACTTCCCGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SHRIGLTPLWSALIKCWSSRVSG*LTSRSR Trigger: ACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCT...TGACCAGCATTTGATTAAAGCTGACCACAGTGGAGTCAAACCAATCCTGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | CGCACCACATTTCCTCCATTCACAGTCAAGCACAACAGGCTGTCTTCACACAAAGTGCTGACATCATCCTaGAAAAGACTCTGGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTTFPPFTVKHNRLSSHKVLTSS*KRLWVS Trigger: CGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCAC...TTTGTGTGAAGACAGCCTGTTGTGCTTGACTGTGAATGGAGGAAATGTGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | ATGAGATACATAGTCATTTTCAATCCACTCAGCAGGAACCTTGGGGTCCAGGTGGTTCTCTGTATCTGTTaGCTCCTCCTGCTCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MRYIVIFNPLSRNLGVQVVLCIC*LLLLRG Trigger: TCCTCGGAGCAGGAGGAGCAAACAGATACAGAGAAC...CACCTGGACCCCAAGGTTCCTGCTGAGTGGATTGAAAATGACTATGTATCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCTGTGGGCCTGTTTCCAACACAATGAGATACATAGTCATTTTCAATAGCAGGGTTAGTGGATaGCTTACTTCCCGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KVGCGPVSNTMRYIVIFNSRVSG*LTSRSR Trigger: ACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCT...ATTGAAAATGACTATGTATCTCATTGTGTTGGAAACAGGCCCACAGCCCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | CAACTTATCCACGTTGTGTCAATTTCCATGTGTCCCTGTCATCCTTCCTTAGAGTCCTCTGAGACCGTTTaGCATAGGCAGGTAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLIHVVSISMCPCHPSLESSETV*HRQVEC Trigger: ACACTCTACCTGCCTATGCAAAACGGTCTCAGAGGA...CTCTAAGGAAGGATGACAGGGACACATGGAAATTGACACAACGTGGATAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS-3UTR CAA 90 bp | TGTTTATACGGTATCTATCCCGCTATAAAAGGGTATATTTACATGTGTGTTTGGTGGGTCTCGCCTGTCTaGGCCATGAAGCGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLYGIYPAIKGYIYMCVWWVSPV*AMKRVS Trigger: ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCA...CCAAACACACATGTAAATATACCCTTTTATAGCGGGATAGATACCGTATAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233174.2 |
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| CDS CAA 90 bp | GGTCCTCCTCCGGGCCAGATGGTAGTTATCAGCAGGGTTAGTGGATaGCTTACTTCCCGGTCTCGTTCCGGAGCCACCAGGCCCGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPPGQMVVISRVSG*LTSRSRSGATRPGR Trigger: GCGGCCGGGCCTGGTGGCTCCGGAACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCTGATAACTACCATCTGGCCCGGAGGAGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS TCA 72 bp | TGGGCTTCTTCACGGGCCGCAGATAGGGGTTATCGATaGCGCTCTCCTCGCCATTCCGGCTGCCGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WASSRAADRGYR*RSPRHSGCRTR Trigger: CCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCATCGATAACCCCTATCTGCGGCCCGTGAAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
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| CDS GCA 72 bp | CTGGGTCTCGCCTGTCTTGGCCATGAAGCGGGTGAGTaGTCGCTCCACGTCTCGTCTCTGAGATGCGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLACLGHEAGE*SLHVSSLRCGL Trigger: AAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGCACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS GCA 72 bp | TCCTCGCCATTCCGGCTGCCGGACAAGGAGGAGCTCTaGTGCAGAACAGAAGCGCTCTCCTTCTCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSPFRLPDKEEL*CRTEALSFSAP Trigger: CGGAGCTGAGAAGGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS GCA 72 bp | TCGCCATTCCGGCTGCCGGACAAGGAGGAGCTCTGCTaGAGAACAGAAGCGCTCTCCTTCTCAGCTCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPFRLPDKEELC*RTEALSFSAPE Trigger: TTCCGGAGCTGAGAAGGAGAGCGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 |
||
| CDS CCA 72 bp | CCGGTTCTGCCCTGCAGTGAGGGCCTTGGGGGTCACTaGCTGATTGGTCACTGGAGGTGCAGTGATGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PVLPCSEGLGGH*LIGHWRCSDDH Trigger: ATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS TCA 72 bp | TTCTGCCCTGCAGTGAGGGCCTTGGGGGTCACTGGCTaGTTGGTCACTGGAGGTGCAGTGATGACCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FCPAVRALGVTG*LVTGGAVMTIL Trigger: GAGGATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS CAA 72 bp | CCGGGCCAGATGGTAGTTATCAGCAGGGTTAGTGGATaGCTTACTTCCCGGTCTCGTTCCGGAGCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGQMVVISRVSG*LTSRSRSGATR Trigger: CCTGGTGGCTCCGGAACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCTGATAACTACCATCTGGCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS CAA 72 bp | AAATCCCGCCTCTGTCAGCAAGGAGCTCACAACCACTaGCAGGGTCCTCCTCCGGGCCAGATGGTAGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: KSRLCQQGAHNH*QGPPPGQMVVI Trigger: GATAACTACCATCTGGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCCTTGCTGACAGAGGCGGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS CAA 72 bp | ACATCATCCTTGAAAAGACTCTGGGTCTCGCCTGTCTaGGCCATGAAGCGGGTGAGTGCTCGCTCCACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSLKRLWVSPV*AMKRVSARSTS Trigger: AGACGTGGAGCGAGCACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS CCA 72 bp | TCAACCAATGTGACCACGATGTCCGACAGTGTGGGCTaGGTCCTGGCTGTGTGCTCACAGTATGACTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: STNVTTMSDSVG*VLAVCSQYDLA Trigger: TGCTAAGTCATACTGTGAGCACACAGCCAGGACCCAGCCCACACTGTCGGACATCGTGGTCACATTGGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
||
| CDS CAA 90 bp | GTGAACGGTCTGGCAGCGATCAAAGGAAAAGTGCTGACATCATCCTaGAAAAGACTCTGGGTCTCGCCTGTCTTGGCCATGAAGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VNGLAAIKGKVLTSS*KRLWVSPVLAMKRV Trigger: CACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTGCCAGACCGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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| CDS CAA 72 bp | CTGGCAGCGATCAAAGGAAAAGTGCTGACATCATCCTaGAAAAGACTCTGGGTCTCGCCTGTCTTGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: LAAIKGKVLTSS*KRLWVSPVLAM Trigger: CATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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| CDS CCA 72 bp | AAAGGAAAAGTGCTGACATCATCCTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCCATGAAGCGGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: KGKVLTSSLKRL*VSPVLAMKRVS Trigger: ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067103.4 ENSMUST00000233121.2 ENSMUST00000233174.2 |
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