Pregenerated sensors for TAF7L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009596Ensembl transcript IDs: ENSMUST00000009740.9, ENSMUST00000113223.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TATATACAGCCCAGGCTGGCCTTCAATTTGACCTTCTaGTTCTGCCTTTTAAATTGCTGGGATTGCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: YIQPRLAFNLTF*FCLLNCWDCQL Trigger: CAGCTGGCAATCCCAGCAATTTAAAAGGCAGAAGCAGAAGGTCAAATTGAAGGCCAGCCTGGGCTGTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| 3UTR GCA 72 bp | AAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATaGATTTATATAACTCCCTCTATATATGTCTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: KRNNIPCGSLNL*IYITPSIYVSY Trigger: ATAGGAGACATATATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGCGGAGCTCCCTCAGTaGGTGCTTCCTCGCCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLAELPQ*VLPRRA Trigger: AGCGCGGCGAGGAAGCACCCACTGAGGGAGCTCCGC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGGGCCGGAAGGGACCTaGGGCTCTTTGGAGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLGPEGT*GSLEPA Trigger: AGCGGGCTCCAAAGAGCCCCAGGTCCCTTCCGGCCC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGCTTCCCAGCGGACACTaGCAGCTTCAGCATCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLLPSGH*QLQHLS Trigger: ACTCAGATGCTGAAGCTGTCAGTGTCCGCTGGGAAG...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | CCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCCAGCACCACCCATCTGTaGGATTCCTGGAGTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLEGESTWCARLRLSSTTHL*DSWSGW Trigger: CCAACCACTCCAGGAATCTCACAGATGGGTGGTGCT...GGAAAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGGTGAGATTCCTGGAGTaGTTGGCATGGACCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRVRFLE*LAWTLD Trigger: GTCAAGGGTCCATGCCAACCACTCCAGGAATCTCAC...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTGACAGCTTCAGCATCTaGGTAGAGCAGTCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLHLEGESTWCARLRLDSFSI*VEQSLH Trigger: GTGAAGAGACTGCTCTACTCAGATGCTGAAGCTGTC...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGCAGTTTAGCAGGCAGTaGGACGTTGTCTACTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLQFSRQ*DVVYLN Trigger: GTTCAAGTAGACAACGTCTCACTGCCTGCTAAACTG...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGCTGCATACAAGCATCTaGGAAACATCCGCGGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLLHTSI*ETSAVL Trigger: TAAGACCGCGGATGTTTCTCAGATGCTTGTATGCAG...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTCTGCATACAAGCATCTaGGAAACATCCGCGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLHLEGESTWCARLRLLHTSI*ETSAVL Trigger: TAAGACCGCGGATGTTTCTCAGATGCTTGTATGCAG...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGTTGGCATGGACCCTTaGCTTTCTATTTCCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLVGMDP*LSISLA Trigger: TGCTAAGGAAATAGAAAGTCAAGGGTCCATGCCAAC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTGGAGTGGTTGGCATaGACCCTTGACTTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRLEWLA*TLDFLF Trigger: AAATAGAAAGTCAAGGGTCCATGCCAACCACTCCAG...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCCACACTTGGAGATTaGGTGTACTCACTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLHLEGESTWCARLRLSTLGD*VYSLKL Trigger: CAACTTTAGTGAGTACACTCAATCTCCAAGTGTGGA...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GGACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGGACAGCTTCAGCATCTaGGTAGAGCAGTCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQKYVVPPSLHLEGESTWDSFSI*VEQSLH Trigger: GTGAAGAGACTGCTCTACTCAGATGCTGAAGCTGTC...CCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGTCTGGAAATGTCTCTTaGGGGTCAAGTTTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRSGNVS*GSSFPL Trigger: AAGTGGAAAACTTGACCCTCAAGAGACATTTCCAGA...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR GCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCATCATTACTGTTGCTaGCAGAATCACCCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRHHYCC*QNHPSS Trigger: AGATGATGGGTGATTCTGGCAGCAACAGTAATGATG...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR GCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGCATCATTACTGTTGCTaGCAGAATCACCCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLHHYCC*QNHPSS Trigger: AGATGATGGGTGATTCTGGCAGCAACAGTAATGATG...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR GCA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCATTAAATTTGGCCTaGAGCTCCTTCTCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLHLEGESTWCARLRLSLNLA*SSFSNS Trigger: GGAGTTAGAGAAGGAGCTGCAGGCCAAATTTAATGA...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCCTTCCCCAAAACATTCTaGAAATGTCTCTTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLEGESTWCARLRLSFPKTF*KCLLRV Trigger: GACCCTCAAGAGACATTTCCAGAATGTTTTGGGGAA...GGAAAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGACATTCTTAAGTGGTaGAGTAACTTCAGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLDILKW*SNFRTA Trigger: TGCAGTCCTGAAGTTACTCCACCACTTAAGAATGTC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAATTGCCATGGTTATTaGACTGTAATCTTGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSLHLEGESTWCARLNCHGY*TVILVC Trigger: GCAGACCAAGATTACAGTTCAATAACCATGGCAATT...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGTCTGACATTCTTAAGTaGTGGAGTAATGCCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRSDILK*WSNAML Trigger: AAGCATGGCATTACTCCACCACTTAAGAATGTCAGA...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGTCTGACATTCTTAAGTaGTGGAGTAACTTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSLHLEGESTWCARLRSDILK*WSNFRT Trigger: AGTCCTGAAGTTACTCCACCACTTAAGAATGTCAGA...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113223.3 |
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| CDS-3UTR TCA 90 bp | GGACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGAATTGCCATGGTTATTaGACTGTAATCTTGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GQKYVVPPSLHLEGESTWNCHGY*TVILVC Trigger: GCAGACCAAGATTACAGTTCAATAACCATGGCAATT...CCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR GCA 90 bp | GACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTTCATTAAATTTGGCCTaGAGCTCCTTCTCTAACTCC | + |
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Preference number: 4 (lower is better) Translates to: DRSMWFHPVFIWRVNPLGSLNLA*SSFSNS Trigger: GGAGTTAGAGAAGGAGCTGCAGGCCAAATTTAATGA...ACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR GCA 90 bp | GGACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGACTGTAATCTTGGTCTaGTTCATGGAGGCTAAATTC | + |
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Preference number: 4 (lower is better) Translates to: GQKYVVPPSLHLEGESTWTVILV*FMEAKF Trigger: GAATTTAGCCTCCATGAAGCAGACCAAGATTACAGT...CCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | AAATTGACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATGGACCTGGGGCTCTTTaGAGCCCGCTTCTTCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KLTKRNNIPCGSLNLCIYGPGAL*SPLLRL Trigger: CAACCGAAGAAGCGGGCTCCAAAGAGCCCCAGGTCC...ATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | GACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACCTTCCCAGCGGACACTaGCAGCTTCAGCATCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DKEKQHPMWVSKPMHLYNLPSGH*QLQHLS Trigger: ACTCAGATGCTGAAGCTGTCAGTGTCCGCTGGGAAG...GTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | AAATTGACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATTCTTCAGGAGGAGAATaGGGCTCACCTTCAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: KLTKRNNIPCGSLNLCIYSSGGE*GSPSGL Trigger: CAGTCCTGAAGGTGAGCCTCATTCTCCTCCTGAAGA...ATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | AAATTGACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATGTGAGATTCCTGGAGTaGTTGGCATGGACCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KLTKRNNIPCGSLNLCIYVRFLE*LAWTLD Trigger: GTCAAGGGTCCATGCCAACCACTCCAGGAATCTCAC...ATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | GACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACCAGTTTAGCAGGCAGTaGGACGTTGTCTACTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: DKEKQHPMWVSKPMHLYNQFSRQ*DVVYLN Trigger: GTTCAAGTAGACAACGTCTCACTGCCTGCTAAACTG...GTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | CCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATATATGTCTCGTTGGCATGGACCCTTaGCTTTCTATTTCCTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: PMWVSKPMHLYNSLYICLVGMDP*LSISLA Trigger: TGCTAAGGAAATAGAAAGTCAAGGGTCCATGCCAAC...GAGACATATATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | CCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATATATGTCTCTCCACACTTGGAGATTaGGTGTACTCACTAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PMWVSKPMHLYNSLYICLSTLGD*VYSLKL Trigger: CAACTTTAGTGAGTACACTCAATCTCCAAGTGTGGA...GAGACATATATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTGGAGTGGTTGGCATaGACCCTTGACTTTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: KEKQHPMWVSKPMHLYNSLEWLA*TLDFLF Trigger: AAATAGAAAGTCAAGGGTCCATGCCAACCACTCCAG...GGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR TCA 90 bp | AAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATTCTGGAAATGTCTCTTaGGGGTCAAGTTTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: KQHPMWVSKPMHLYNSLYSGNVS*GSSFPL Trigger: AAGTGGAAAACTTGACCCTCAAGAGACATTTCCAGA...ATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | AAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATGACATTCTTAAGTGGTaGAGTAATGCCATGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KQHPMWVSKPMHLYNSLYDILKW*SNAMLP Trigger: TGGAAGCATGGCATTACTCCACCACTTAAGAATGTC...ATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CCA 90 bp | AAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATTTCCCCAAAACATTCTaGAAATGTCTCTTGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KQHPMWVSKPMHLYNSLYFPKTF*KCLLRV Trigger: GACCCTCAAGAGACATTTCCAGAATGTTTTGGGGAA...ATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CAA 90 bp | GTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGGGGACCTGGGGCTCTTaGGAGCCCGCTTCTTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: VPPSLHLEGESTWCARLRGTWGS*EPASSV Trigger: AACCGAAGAAGCGGGCTCCAAAGAGCCCCAGGTCCC...CCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS TCA 90 bp | GCTTGTTCCGGAGGCAGACGCAATATAAACTGTTCCTCAACGTCATaGCATTCAAGCCTTACACTCATGGCTGCCGCTGCTGGCCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ACSGGRRNINCSSTS*HSSLTLMAAAAGRG Trigger: GCCCCGGCCAGCAGCGGCAGCCATGAGTGTAAGGCTTGAATGTCATGACGTTGAGGAACAGTTTATATTGCGTCTGCCTCCGGAACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTAGATTCCTGGAGTGGTaGGCATGGACCCTTGACTTT | + |
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Preference number: 5 (lower is better) Translates to: PPSLHLEGESTWCARLRLRFLEW*AWTLDF Trigger: AAAGTCAAGGGTCCATGCCAACCACTCCAGGAATCT...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTGGTTGGCATGGACCCTaGACTTTCTATTTCCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: PPSLHLEGESTWCARLRLGWHGP*TFYFLS Trigger: GCTAAGGAAATAGAAAGTCAAGGGTCCATGCCAACC...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGGTTGGCATGGACCCTaGACTTTCTATTTCCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: VVPPSLHLEGESTWCARLGWHGP*TFYFLS Trigger: GCTAAGGAAATAGAAAGTCAAGGGTCCATGCCAACC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGCATCTGGGAGCTTTTTaGTTGTTTTCCGGAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: VVPPSLHLEGESTWCARLHLGAF*LFSGTF Trigger: AAAGGTTCCGGAAAACAACAAAAAAGCTCCCAGATG...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGGTTGATTTCATCCACTaGTTTCACATCTGGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VVPPSLHLEGESTWCARLVDFIH*FHIWEL Trigger: AAGCTCCCAGATGTGAAACAAGTGGATGAAATCAAC...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTTCTGGAAATGTCTCTaGAGGGTCAAGTTTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: PPSLHLEGESTWCARLRLFWKCL*RVKFST Trigger: AGTGGAAAACTTGACCCTCAAGAGACATTTCCAGAA...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGTTCTGGAAATGTCTCTaGAGGGTCAAGTTTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: VVPPSLHLEGESTWCARLFWKCL*RVKFST Trigger: AGTGGAAAACTTGACCCTCAAGAGACATTTCCAGAA...CAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS TCA 90 bp | GCTTGTTCCGGAGGCAGACGCAATATAAACTGTTCCTCAACGTCATaGCATTCAAGCCTTACACTCATGGATCGCATGGCACTCTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: ACSGGRRNINCSSTS*HSSLTLMDRMALSR Trigger: CCTCGAGAGTGCCATGCGATCCATGAGTGTAAGGCTTGAATGTCATGACGTTGAGGAACAGTTTATATTGCGTCTGCCTCCGGAACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS TCA 90 bp | CAGGCTTCCGATAACACAAGGCAGATTAACCAGTTTAGCAGGCAGTaGGACGTTGTCTACTTGAACAACCGCATGGTGGCCATCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: QASDNTRQINQFSRQ*DVVYLNNRMVAIRR Trigger: TCTCCTGATGGCCACCATGCGGTTGTTCAAGTAGACAACGTCTCACTGCCTGCTAAACTGGTTAATCTGCCTTGTGTTATCGGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCCTTCCACACTTGGAGATaGAGTGTACTCACTAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PSLHLEGESTWCARLRLSFHTWR*SVLTKV Trigger: AACTTTAGTGAGTACACTCAATCTCCAAGTGTGGAA...GGAAAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTAGATTCCTGGAGTGGTaGGCATGGACCCTTGACTTT | + |
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Preference number: 5 (lower is better) Translates to: DRSMWFHPVFIWRVNPLGRFLEW*AWTLDF Trigger: AAAGTCAAGGGTCCATGCCAACCACTCCAGGAATCT...ACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CAA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTGAATTGCCATGGTTATaGAACTGTAATCTTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PPSLHLEGESTWCARLRLELPWL*NCNLGL Trigger: CAGACCAAGATTACAGTTCAATAACCATGGCAATTC...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTCAGGAAACATTTCAGTaGTTCCTGGAGGTGATAAAT | + |
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Preference number: 5 (lower is better) Translates to: PPSLHLEGESTWCARLRLQETFQ*FLEVIN Trigger: ATTTATCACCTCCAGGAACAACTGAAATGTTTCCTG...AAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTGTGCCAGGCTGAGGCTTTCCCAGGAAACATTTCAGTaGTTCCTGGAGGTGATAAAT | + |
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Preference number: 5 (lower is better) Translates to: PSLHLEGESTWCARLRLSQETFQ*FLEVIN Trigger: ATTTATCACCTCCAGGAACAACTGAAATGTTTCCTG...GGAAAGCCTCAGCCTGGCACACCAAGTGGATTCACCCTCCAGATGAAGACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | AAATTGACAAAGAGAAACAACATCCCATGTGGGTCTCTAAACCTATGCATTTATGGAATAACGGGGGCTTaGGCCTCCACCAAAGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: KLTKRNNIPCGSLNLCIYGITGA*ASTKAP Trigger: GGGGGCTTTGGTGGAGGCCAAAGCCCCCGTTATTCC...ATAAATGCATAGGTTTAGAGACCCACATGGGATGTTGTTTCTCTTTGTCAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS-3UTR CAA 90 bp | GACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTCATCTGGGAGCTTTTTaGTTGTTTTCCGGAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: DRSMWFHPVFIWRVNPLGHLGAF*LFSGTF Trigger: AAAGGTTCCGGAAAACAACAAAAAAGCTCCCAGATG...ACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS GCA 90 bp | CATCGTCGTCACCTTCATTACTCTTCTCTTCCACATCATTACTGTTaGTGCCAGAATCACCCATCATCTCCCGAAACACATCATAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: HRRHLHYSSLPHHYC*CQNHPSSPETHHSL Trigger: CAGACTATGATGTGTTTCGGGAGATGATGGGTGATTCTGGCAGCAACAGTAATGATGTGGAAGAGAAGAGTAATGAAGGTGACGACGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | GACAGAAGTATGTGGTTCCACCCAGTCTTCATCTGGAGGGTGAATCCACTTGGTTTCCACACTTGGAGATaGAGTGTACTCACTAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: DRSMWFHPVFIWRVNPLGFHTWR*SVLTKV Trigger: AACTTTAGTGAGTACACTCAATCTCCAAGTGTGGAA...ACCAAGTGGATTCACCCTCCAGATGAAGACTGGGTGGAACCACATACTTCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS GCA 90 bp | CGTCGTCACCTTCATTACTCTTCTCTTCCACATCATTACTGTTGCTaGCAGAATCACCCATCATCTCCCGAAACACATCATAGTCTGATA | + |
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Preference number: 5 (lower is better) Translates to: RRHLHYSSLPHHYCC*QNHPSSPETHHSLI Trigger: TATCAGACTATGATGTGTTTCGGGAGATGATGGGTGATTCTGGCAGCAACAGTAATGATGTGGAAGAGAAGAGTAATGAAGGTGACGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS-3UTR CAA 90 bp | CCCATGTGGGTCTCTAAACCTATGCATTTATATAACTCCCTCTATATATGTCTCGAATTGCCATGGTTATaGAACTGTAATCTTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PMWVSKPMHLYNSLYICLELPWL*NCNLGL Trigger: CAGACCAAGATTACAGTTCAATAACCATGGCAATTC...GAGACATATATAGAGGGAGTTATATAAATGCATAGGTTTAGAGACCCACATGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS CCA 72 bp | TCCCCAGCACCTTCGGGACGAGGGCCGGAAGGGACCTaGGGCTCTTTGGAGCCCGCTTCTTCGGTTGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: SPAPSGRGPEGT*GSLEPASSVVE Trigger: TTCGACAACCGAAGAAGCGGGCTCCAAAGAGCCCCAGGTCCCTTCCGGCCCTCGTCCCGAAGGTGCTGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS CAA 72 bp | CCTTCGGGACGAGGGCCGGAAGGGACCTGGGGCTCTTaGGAGCCCGCTTCTTCGGTTGTCGAAACATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PSGRGPEGTWGS*EPASSVVETSV Trigger: TACAGATGTTTCGACAACCGAAGAAGCGGGCTCCAAAGAGCCCCAGGTCCCTTCCGGCCCTCGTCCCGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS CCA 72 bp | CGTCATGACATTCAAGCCTTACACTCATGGATCGCATaGCACTCTCGAGGGTCTGGCAGCGAGCAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RHDIQALHSWIA*HSRGSGSEQCP Trigger: AGGGCACTGCTCGCTGCCAGACCCTCGAGAGTGCCATGCGATCCATGAGTGTAAGGCTTGAATGTCATGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS TCA 72 bp | GGAGGCAGACGCAATATAAACTGTTCCTCAACGTCATaGCATTCAAGCCTTACACTCATGGCTGCCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGRRNINCSSTS*HSSLTLMAAAA Trigger: AGCAGCGGCAGCCATGAGTGTAAGGCTTGAATGTCATGACGTTGAGGAACAGTTTATATTGCGTCTGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113223.3 |
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| CDS TCA 72 bp | GATAACACAAGGCAGATTAACCAGTTTAGCAGGCAGTaGGACGTTGTCTACTTGAACAACCGCATGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: DNTRQINQFSRQ*DVVYLNNRMVA Trigger: GGCCACCATGCGGTTGTTCAAGTAGACAACGTCTCACTGCCTGCTAAACTGGTTAATCTGCCTTGTGTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS GCA 72 bp | GTTCTTCAGGAGGAGAATGAGGCTCACCTTCAGGACTaGATACAAGCATCTGAGAAACATCCGCGGTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: VLQEENEAHLQD*IQASEKHPRSY Trigger: ATAAGACCGCGGATGTTTCTCAGATGCTTGTATGCAGTCCTGAAGGTGAGCCTCATTCTCCTCCTGAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS TCA 72 bp | GGAGGCAGACGCAATATAAACTGTTCCTCAACGTCATaGCATTCAAGCCTTACACTCATGGATCGCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: GGRRNINCSSTS*HSSLTLMDRMA Trigger: TGCCATGCGATCCATGAGTGTAAGGCTTGAATGTCATGACGTTGAGGAACAGTTTATATTGCGTCTGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009740.9 |
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| CDS GCA 72 bp | CACCTTCATTACTCTTCTCTTCCACATCATTACTGTTaGTGCCAGAATCACCCATCATCTCCCGAAACACAT | + |
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Preference number: 6 (lower is better) Translates to: HLHYSSLPHHYC*CQNHPSSPETH Trigger: ATGTGTTTCGGGAGATGATGGGTGATTCTGGCAGCAACAGTAATGATGTGGAAGAGAAGAGTAATGAAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS CAA 72 bp | TCTTGGTCTGCTTCATGGAGGCTAAATTCATTAAATTaGGCCTGCAGCTCCTTCTCTAACTCCTCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SWSASWRLNSLN*ACSSFSNSSSE Trigger: TTCTGAAGAGGAGTTAGAGAAGGAGCTGCAGGCCAAATTTAATGAATTTAGCCTCCATGAAGCAGACCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS CAA 90 bp | CCAAGCAGCATTTCTAGAATGTATAATTTTCCTGACAGCATAAGCTaGTTCCGGAGGCAGACGCAATATAAACTGTTCCTCAACGTCATG | + |
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Preference number: 6 (lower is better) Translates to: PSSISRMYNFPDSIS*FRRQTQYKLFLNVM Trigger: CATGACGTTGAGGAACAGTTTATATTGCGTCTGCCTCCGGAACAAGCTTATGCTGTCAGGAAAATTATACATTCTAGAAATGCTGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS GCA 72 bp | TCTGCTTCATGGAGGCTAAATTCATTAAATTTGGCCTaGAGCTCCTTCTCTAACTCCTCTTCAGAATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SASWRLNSLNLA*SSFSNSSSELS Trigger: AGACAATTCTGAAGAGGAGTTAGAGAAGGAGCTGCAGGCCAAATTTAATGAATTTAGCCTCCATGAAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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| CDS CAA 72 bp | ATTTCTAGAATGTATAATTTTCCTGACAGCATAAGCTaGTTCCGGAGGCAGACGCAATATAAACTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ISRMYNFPDSIS*FRRQTQYKLFL Trigger: GAGGAACAGTTTATATTGCGTCTGCCTCCGGAACAAGCTTATGCTGTCAGGAAAATTATACATTCTAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009740.9 ENSMUST00000113223.3 |
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