Pregenerated sensors for TAF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051316Ensembl transcript IDs: ENSMUST00000066272.6
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCTCTGGCAGCCGTCAACAGCAATACAGAAGGCAAGTTCTCAATaGAAGGGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: RLWQPSTAIQKASSQ*KGPDDFHSEFILSL Trigger: CAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCCCTTTCATTGAGAACTTGCCTTCTGTATTGCTGTTGACGGCTGCCAGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATAACCTCCAGATGAAGTaGGTGGACCTGAACCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: EENRSKRIKLQITRPKNHNLQMK*VDLNLN Trigger: ATTAAGGTTCAGGTCCACCCACTTCATCTGGAGGTT...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTGCATTTCTGTAACATaGAAACTTGCTGAGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYCISVT*KLAEVK Trigger: TTTTACCTCAGCAAGTTTCCATGTTACAGAAATGCA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| 3UTR-3UTR CAA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGAATTCATACTTAGTTaGCCTAGGGGCAGCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYEFILS*PRGSFL Trigger: TAAAAAGCTGCCCCTAGGCAAACTAAGTATGAATTC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATAGAACAGGATTTATCTaGATCTACACCATTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: EENRSKRIKLQITRPKNHRTGFI*IYTIQS Trigger: TGACTGAATGGTGTAGATCAAGATAAATCCTGTTCT...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| 3UTR CAA 72 bp | GCCAGGCCTGCCCATGCACACCTACAGTCCCAGCACTaGATTGAGAGAACTGAGTTCAAGGCCATCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ARPAHAHLQSQH*IERTEFKAILR Trigger: TCTCAGGATGGCCTTGAACTCAGTTCTCTCAATCAAGTGCTGGGACTGTAGGTGTGCATGGGCAGGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTATGCCCAGACTGCACTaGCCTCCTCACCGTAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFMPRLH*PPHRSG Trigger: GCCGCTACGGTGAGGAGGGCAGTGCAGTCTGGGCAT...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTGAGCTCATCCAGAACTaGCTGAAACCTGTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFELIQN*LKPVLE Trigger: CTCAAGAACAGGTTTCAGGCAGTTCTGGATGAGCTC...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTGGTCACCATCTACTGTaGCTACAAGCATCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFGHHLL*LQASER Trigger: TCTCTCAGATGCTTGTAGCCACAGTAGATGGTGACC...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTGAGATGTCCAGGCCTTaGTTTTCTGTCTCCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFEMSRP*FSVSFV Trigger: AACAAAGGAGACAGAAAATCAAGGCCTGGACATCTC...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTCAGGGTGTAACTCAATaGTCAGTTTGTCTTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFQGVTQ*SVCLSG Trigger: ACCTGAAAGACAAACTGAGCATTGAGTTACACCCTG...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACATCAGCAGTGGCAGCTaGCTCCTCCACAGGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYISSGS*LLHRRV Trigger: TACCCTCCTGTGGAGGAGGCAGCTGCCACTGCTGAT...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTAATGTACTTCTTCTTTaGTGTCTTCCGGAACCGTCT | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFNVLLL*CLPEPS Trigger: AGACGGTTCCGGAAGACAGCAAAGAAGAAGTACATT...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACCTTTGGGATCAGCAGTaGCAGCTGCCTCCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYLWDQQ*QLPPPQ Trigger: CTGTGGAGGAGGCAGCTGCCACTGCTGATCCCAAAG...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTCTGTCTTGGGTTTCTTaGAGCTTGCCTTTCATGTTA | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFLSWVS*SLPFML Trigger: TAACATGAAAGGCAAGCTCCAAGAAACCCAAGACAG...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACACTCTGACAATGCCGTaGCGCCCATCAGGGTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYTLTMP*RPSGCN Trigger: GTTACACCCTGATGGGCGTCACGGCATTGTCAGAGT...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTGGGTTTCTTGGAGCTTaGCTTTCATGTTATCTATCT | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFGFLGA*LSCYLS Trigger: AGATAGATAACATGAAAGGCAAGCTCCAAGAAACCC...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGTGGCCAGACATTCCTaGAGAAGAGATGTCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYVARHS*RRDVQA Trigger: GGCCTGGACATCTCTTCTCCAGGAATGTCTGGCCAC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTATTCCCATAACCAACTaGTTGGTTCCTTCATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFIPITN*LVPSFS Trigger: AGAAAATGAAGGAACCAATCAGTTGGTTATGGGAAT...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTCTTTCAGGTTGACATaGCCAGACTGCACTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYSFRLT*PDCTAL Trigger: GAGGGCAGTGCAGTCTGGGCATGTCAACCTGAAAGA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATTCATGGCCTTGCCTGTaGCCAGACATTCCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHSWPCL*PDIPGE Trigger: TTCTCCAGGAATGTCTGGCCACAGGCAAGGCCATGA...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGTTTGTCTTTCAGGTTaGCATGCCCAGACTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYVCLSG*HAQTAL Trigger: CAGTGCAGTCTGGGCATGTCAACCTGAAAGACAAAC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTCATCCAGAACTGCCTaGAACCTGTTCTTGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYSSRTA*NLFLRA Trigger: GGCTCTCAAGAACAGGTTTCAGGCAGTTCTGGATGA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATATCTTCCTGGCGCTTTaGCCTGTCTTGGGTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHIFLAL*PVLGFL Trigger: CAAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGAT...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGATTCCAGCTCTTCCTaGAAAGAGCTAAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYDSSSS*KELSCS Trigger: GGAGCAGCTTAGCTCTTTGCAGGAAGAGCTGGAATC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTGGTAGAGTAATTCCATaGTTCCAAACAAACTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GPDDFHSEFILSLPRGSFGRVIP*FQTNFF Trigger: GAAAAAGTTTGTTTGGAACCATGGAATTACTCTACC...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGTGGCTACAAGCATCTaGGAGATATCAGCTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYVATSI*EISAVL Trigger: CAAGACAGCTGATATCTCTCAGATGCTTGTAGCCAC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR TCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATTACTCAGCAGACGCTTaGCTTCTTTTTCCACATCCG | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHYSADA*LLFPHP Trigger: CGGATGTGGAAAAAGAAGTCAAGCGTCTGCTGAGTA...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACAGTACTGACAGCTTCTaGATCTGTACTCAGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYSTDSF*ICTQQT Trigger: CGTCTGCTGAGTACAGATGCAGAAGCTGTCAGTACT...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATTCTCGAAGCTCATCATaGTCTAGTGAGTCATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHSRSSS*SSESWP Trigger: AGGCCATGACTCACTAGAGCATGATGAGCTTCGAGA...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATTGCAAAGAGCTAAGCTaGTCCTTTTCGCGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHCKELS*SFSRSS Trigger: AGAAGACCGCGAAAAGGAGCAGCTTAGCTCTTTGCA...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTTTTCTTGTTTGCTTTaGGATCAGCAGTGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYFSCLL*DQQWQL Trigger: CAGCTGCCACTGCTGATCCCAAAGCAAACAAGAAAA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CCA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATGTTCCTTCATTTTCTTaGTGTTGCTCGTCGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: EENRSKRIKLQITRPKNHVPSFS*CCSSDS Trigger: TGAATCCGACGAGCAACACCAAGAAAATGAAGGAAC...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTCATTTTCTTGGTGTTaGTCGTCGGATTCATTTAGC | + |
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Preference number: 4 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYSFSWC*SSDSFS Trigger: GCTAAATGAATCCGACGAGCAACACCAAGAAAATGA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS TCA 90 bp | ACCAATTTTGCAGCCAAGGGCACTCGATCCACTCTGACAATGCCGTaGCGCCCATCAGGGTGTAACTCAATGCTCAGTTTGTCTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TNFAAKGTRSTLTMP*RPSGCNSMLSLSFR Trigger: CCTGAAAGACAAACTGAGCATTGAGTTACACCCTGATGGGCGTCACGGCATTGTCAGAGTGGATCGAGTGCCCTTGGCTGCAAAATTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS TCA 90 bp | AAGGCAAATCGACCAATTTTGCAGCCAAGGGCACTCGATCCACTCTaGCAATGCCGTGACGCCCATCAGGGTGTAACTCAATGCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KANRPILQPRALDPL*QCRDAHQGVTQCSV Trigger: AACTGAGCATTGAGTTACACCCTGATGGGCGTCACGGCATTGTCAGAGTGGATCGAGTGCCCTTGGCTGCAAAATTGGTCGATTTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CCA 90 bp | TGGCAGCTGCCTCCTCCACAGGAGGGTATAGGTCACCATCTACTGTaGCTACAAGCATCTGAGAGATATCAGCTGTCTTGTAAAAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: WQLPPPQEGIGHHLL*LQASERYQLSCKRF Trigger: AAACCTTTTACAAGACAGCTGATATCTCTCAGATGCTTGTAGCCACAGTAGATGGTGACCTATACCCTCCTGTGGAGGAGGCAGCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CCA 90 bp | CTGTTCTTGAGAGCCAGGTTTTCTACCTTCATAATGAGATCTTCCTaGCGCTTTGCCCTGTCTTGGGTTTCTTGGAGCTTGCCTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LFLRARFSTFIMRSS*RFALSWVSWSLPFM Trigger: CATGAAAGGCAAGCTCCAAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGATCTCATTATGAAGGTAGAAAACCTGGCTCTCAAGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 90 bp | CACTTCTCCAGAAGTGATTCCAGCTCTTCCTGCAAAGAGCTAAGCTaGTCCTTTTCGCGGTCTTCTTTTTGTTTGAGCTCATCCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: HFSRSDSSSSCKELS*SFSRSSFCLSSSRT Trigger: AGTTCTGGATGAGCTCAAACAAAAAGAAGACCGCGAAAAGGAGCAGCTTAGCTCTTTGCAGGAAGAGCTGGAATCACTTCTGGAGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTCCTGTCTTGGGTTTCTaGGAGCTTGCCTTTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: GPDDFHSEFILSLPRGSFPVLGF*ELAFHV Trigger: AACATGAAAGGCAAGCTCCAAGAAACCCAAGACAGG...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 90 bp | TGTTTCATCTTCAGCAATTATCTCCCAACGAGTACTGACAGCTTCTaGATCTGTACTCAGCAGACGCTTGACTTCTTTTTCCACATCCGG | + |
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Preference number: 5 (lower is better) Translates to: CFIFSNYLPTSTDSF*ICTQQTLDFFFHIR Trigger: CCGGATGTGGAAAAAGAAGTCAAGCGTCTGCTGAGTACAGATGCAGAAGCTGTCAGTACTCGTTGGGAGATAATTGCTGAAGATGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 90 bp | GAGAGCCAGGTTTTCTACCTTCATAATGAGATCTTCCTGGCGCTTTaGCCTGTCTTGGGTTTCTTGGAGCTTGCCTTTCATGTTATCTAT | + |
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Preference number: 5 (lower is better) Translates to: ESQVFYLHNEIFLAL*PVLGFLELAFHVIY Trigger: ATAGATAACATGAAAGGCAAGCTCCAAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGATCTCATTATGAAGGTAGAAAACCTGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTTTCGCGGTCTTCTTTTaGTTTGAGCTCATCCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: GPDDFHSEFILSLPRGSFFAVFF*FELIQN Trigger: GTTCTGGATGAGCTCAAACAAAAAGAAGACCGCGAA...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GGGCCAGATGACTTCCATTCTGAATTCATACTTAGTTTGCCTAGGGGCAGCTTTTGGGTTTCTTGGAGCTaGCCTTTCATGTTATCTATC | + |
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Preference number: 5 (lower is better) Translates to: GPDDFHSEFILSLPRGSFWVSWS*PFMLSI Trigger: GATAGATAACATGAAAGGCAAGCTCCAAGAAACCCA...AAAGCTGCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATGCGCTTTGCCCTGTCTaGGGTTTCTTGGAGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EENRSKRIKLQITRPKNHALCPV*GFLELA Trigger: GGCAAGCTCCAAGAAACCCAAGACAGGGCAAAGCGC...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGATCTTCCTGGCGCTTaGCCCTGTCTTGGGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYDLPGA*PCLGFL Trigger: AAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGATC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATAGTTTGTCTTTCAGGTaGACATGCCCAGACTGCACT | + |
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Preference number: 5 (lower is better) Translates to: EENRSKRIKLQITRPKNHSLSFR*TCPDCT Trigger: AGTGCAGTCTGGGCATGTCAACCTGAAAGACAAACT...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGTACTCAGCAGACGCTaGACTTCTTTTTCCACATCC | + |
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Preference number: 5 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYVLSRR*TSFSTS Trigger: GGATGTGGAAAAAGAAGTCAAGCGTCTGCTGAGTAC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATCTGCTGCTGAGGTCATaGAATATCTCTCGAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: EENRSKRIKLQITRPKNHLLLRS*NISRSS Trigger: TGAGCTTCGAGAGATATTCAATGACCTCAGCAGCAG...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACGGTTCCTTCATTTTCTaGGTGTTGCTCGTCGGATTC | + |
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Preference number: 5 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYGSFIF*VLLVGF Trigger: GAATCCGACGAGCAACACCAAGAAAATGAAGGAACC...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATCGGTCTTCTTTTTGTTaGAGCTCATCCAGAACTGCC | + |
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Preference number: 5 (lower is better) Translates to: EENRSKRIKLQITRPKNHRSSFC*SSSRTA Trigger: GGCAGTTCTGGATGAGCTCAAACAAAAAGAAGACCG...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | GAAGAAAATAGAAGCAAACGGATTAAGCTACAAATTACACGGCCCAAAAATCATAGAGATGTCCAGGCCTaGATTTTCTGTCTCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: EENRSKRIKLQITRPKNHRDVQA*IFCLLC Trigger: ACAAAGGAGACAGAAAATCAAGGCCTGGACATCTCT...ATGATTTTTGGGCCGTGTAATTTGTAGCTTAATCCGTTTGCTTCTATTTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS-3UTR CAA 90 bp | TTAGTAAATGGTAACGTTTCTTTGTTAACTCTTCACTCACCATATTCCAGGTACTCGGATTCATTTAGCTaGTCTTGTAGCTGTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LVNGNVSLLTLHSPYSRYSDSFS*SCSCLS Trigger: GGAGAGACAGCTACAAGACAAGCTAAATGAATCCGA...GTACCTGGAATATGGTGAGTGAAGAGTTAACAAAGAAACGTTACCATTTACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | CAGTTTGTCTTTCAGGTTGACATGCCCAGACTGCACTaGCCTCCTCACCGTAGCGGCATATTCTGGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QFVFQVDMPRLH*PPHRSGIFWGQ Trigger: CTGCCCCCAGAATATGCCGCTACGGTGAGGAGGGCAGTGCAGTCTGGGCATGTCAACCTGAAAGACAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS TCA 72 bp | GCAGCCAAGGGCACTCGATCCACTCTGACAATGCCGTaGCGCCCATCAGGGTGTAACTCAATGCTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AAKGTRSTLTMP*RPSGCNSMLSL Trigger: CAAACTGAGCATTGAGTTACACCCTGATGGGCGTCACGGCATTGTCAGAGTGGATCGAGTGCCCTTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS TCA 72 bp | CGACCAATTTTGCAGCCAAGGGCACTCGATCCACTCTaGCAATGCCGTGACGCCCATCAGGGTGTAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: RPILQPRALDPL*QCRDAHQGVTQ Trigger: TTGAGTTACACCCTGATGGGCGTCACGGCATTGTCAGAGTGGATCGAGTGCCCTTGGCTGCAAAATTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | ATGCTCAGTTTGTCTTTCAGGTTGACATGCCCAGACTaGACTGCCCTCCTCACCGTAGCGGCATATTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: MLSLSFRLTCPD*TALLTVAAYSG Trigger: CCCAGAATATGCCGCTACGGTGAGGAGGGCAGTGCAGTCTGGGCATGTCAACCTGAAAGACAAACTGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CCA 72 bp | AGCTCATCATGCTCTAGTGAGTCATGGCCTTGCCTGTaGCCAGACATTCCTGGAGAAGAGATGTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSCSSESWPCL*PDIPGEEMSRP Trigger: AGGCCTGGACATCTCTTCTCCAGGAATGTCTGGCCACAGGCAAGGCCATGACTCACTAGAGCATGATGAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | TCTCGAAGCTCATCATGCTCTAGTGAGTCATGGCCTTaGCTGTGGCCAGACATTCCTGGAGAAGAGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSSSCSSESWP*LWPDIPGEEMS Trigger: GGACATCTCTTCTCCAGGAATGTCTGGCCACAGGCAAGGCCATGACTCACTAGAGCATGATGAGCTTCGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | CAAGCTTTCCGTAACACAAGGCAAATCGACCAATTTTaGAGCCAAGGGCACTCGATCCACTCTGACAATGCC | + |
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Preference number: 6 (lower is better) Translates to: QAFRNTRQIDQF*SQGHSIHSDNA Trigger: GGCATTGTCAGAGTGGATCGAGTGCCCTTGGCTGCAAAATTGGTCGATTTGCCTTGTGTTACGGAAAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CCA 72 bp | CCTCCTCCACAGGAGGGTATAGGTCACCATCTACTGTaGCTACAAGCATCTGAGAGATATCAGCTGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PPPQEGIGHHLL*LQASERYQLSC Trigger: ACAAGACAGCTGATATCTCTCAGATGCTTGTAGCCACAGTAGATGGTGACCTATACCCTCCTGTGGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 90 bp | CTCTTCCTGCAAAGAGCTAAGCTGCTCCTTTTCGCGGTCTTCTTTTaGTTTGAGCTCATCCAGAACTGCCTGAAACCTGTTCTTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LFLQRAKLLLFAVFF*FELIQNCLKPVLES Trigger: GCTCTCAAGAACAGGTTTCAGGCAGTTCTGGATGAGCTCAAACAAAAAGAAGACCGCGAAAAGGAGCAGCTTAGCTCTTTGCAGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS TCA 72 bp | CGGTCTTCTTTTTGTTTGAGCTCATCCAGAACTGCCTaGAACCTGTTCTTGAGAGCCAGGTTTTCTACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSSFCLSSSRTA*NLFLRARFSTF Trigger: GAAGGTAGAAAACCTGGCTCTCAAGAACAGGTTTCAGGCAGTTCTGGATGAGCTCAAACAAAAAGAAGACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | TTCGCGGTCTTCTTTTTGTTTGAGCTCATCCAGAACTaGCTGAAACCTGTTCTTGAGAGCCAGGTTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: FAVFFLFELIQN*LKPVLESQVFY Trigger: GTAGAAAACCTGGCTCTCAAGAACAGGTTTCAGGCAGTTCTGGATGAGCTCAAACAAAAAGAAGACCGCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS GCA 72 bp | AGAAGTGATTCCAGCTCTTCCTGCAAAGAGCTAAGCTaGTCCTTTTCGCGGTCTTCTTTTTGTTTGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSDSSSSCKELS*SFSRSSFCLSS Trigger: TGAGCTCAAACAAAAAGAAGACCGCGAAAAGGAGCAGCTTAGCTCTTTGCAGGAAGAGCTGGAATCACTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 72 bp | CAAAGAGCTAAGCTGCTCCTTTTCGCGGTCTTCTTTTaGTTTGAGCTCATCCAGAACTGCCTGAAACCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QRAKLLLFAVFF*FELIQNCLKPV Trigger: AACAGGTTTCAGGCAGTTCTGGATGAGCTCAAACAAAAAGAAGACCGCGAAAAGGAGCAGCTTAGCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 90 bp | TTGGTTCCTTCATTTTCTTGGTGTTGCTCGTCGGATTCATTTAGCTaGTCTTGTAGCTGTCTCTCCAGATCTTCCTCAGTGTCAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LVPSFSWCCSSDSFS*SCSCLSRSSSVSRM Trigger: CATCCTTGACACTGAGGAAGATCTGGAGAGACAGCTACAAGACAAGCTAAATGAATCCGACGAGCAACACCAAGAAAATGAAGGAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 90 bp | GTTTTCTACCTTCATAATGAGATCTTCCTGGCGCTTTGCCCTGTCTaGGGTTTCTTGGAGCTTGCCTTTCATGTTATCTATCTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VFYLHNEIFLALCPV*GFLELAFHVIYLLL Trigger: CAGAAGCAGATAGATAACATGAAAGGCAAGCTCCAAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGATCTCATTATGAAGGTAGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 72 bp | TCATTTTCTTGGTGTTGCTCGTCGGATTCATTTAGCTaGTCTTGTAGCTGTCTCTCCAGATCTTCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SFSWCCSSDSFS*SCSCLSRSSSV Trigger: CACTGAGGAAGATCTGGAGAGACAGCTACAAGACAAGCTAAATGAATCCGACGAGCAACACCAAGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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| CDS CAA 72 bp | CTTCATAATGAGATCTTCCTGGCGCTTTGCCCTGTCTaGGGTTTCTTGGAGCTTGCCTTTCATGTTATCTAT | + |
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Preference number: 6 (lower is better) Translates to: LHNEIFLALCPV*GFLELAFHVIY Trigger: ATAGATAACATGAAAGGCAAGCTCCAAGAAACCCAAGACAGGGCAAAGCGCCAGGAAGATCTCATTATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066272.6 |
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