Pregenerated sensors for TAF6L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003680Ensembl transcript IDs: ENSMUST00000003777.5, ENSMUST00000176496.8, ENSMUST00000176610.9, ENSMUST00000177056.8, ENSMUST00000177216.8, ENSMUST00000189739.7
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGACGAGGAGCACCCCGCGCCCGGTGTACGCGCGGTAGCGGCCTaGTCTCCGAGGCGGCGGTGGCGGTGGCGAGAGTCCCACCGCACG | + |
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Preference number: 5 (lower is better) Translates to: ADEEHPAPGVRAVAA*SPRRRWRWRESHRT Trigger: CGTGCGGTGGGACTCTCGCCACCGCCACCGCCGCCTCGGAGAGCAGGCCGCTACCGCGCGTACACCGGGCGCGGGGTGCTCCTCGTCAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | CGGCTCTTCTGGAAGACGTCTCGCGTTCCCGCGCCGGGGCCCTGCTaGCGAGGAGCACCCCGCGCCCGGTGTACGCGCGGTAGCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RLFWKTSRVPAPGPC*RGAPRARCTRGSGL Trigger: CAGGCCGCTACCGCGCGTACACCGGGCGCGGGGTGCTCCTCGTCAGCAGGGCCCCGGCGCGGGAACGCGAGACGTCTTCCAGAAGAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | GCGCCCGGTGTACGCGCGGTAGCGGCCTGCTCTCCGAGGCGGCGGTaGCGGTGGCGAGAGTCCCACCGCACGGGCTTTCGTCACCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: APGVRAVAACSPRRR*RWRESHRTGFRHPE Trigger: CTCAGGGTGACGAAAGCCCGTGCGGTGGGACTCTCGCCACCGCCACCGCCGCCTCGGAGAGCAGGCCGCTACCGCGCGTACACCGGGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | GCGGTGGCGGTGGCGAGAGTCCCACCGCACGGGCTTTCGTCACCCTaGGGGCTGACCACGGCGCTGGCAGTCAGCTGCGGCATTTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: AVAVARVPPHGLSSP*GLTTALAVSCGIFR Trigger: GCGGAAAATGCCGCAGCTGACTGCCAGCGCCGTGGTCAGCCCTCAGGGTGACGAAAGCCCGTGCGGTGGGACTCTCGCCACCGCCACCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 90 bp | AGTTTGAAAGAGGCGCCCGCGGCAGCGCCGCCCGGCCTGACGCCCTaGGATTATAAACCGGAAGTGTGGGGCGCCACGGGGCGCGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: SLKEAPAAAPPGLTP*DYKPEVWGATGREA Trigger: CGCTTCGCGCCCCGTGGCGCCCCACACTTCCGGTTTATAATCGCAGGGCGTCAGGCCGGGCGGCGCTGCCGCGGGCGCCTCTTTCAAACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | GCAGCGCCGCCCGGCCTGACGCCCTGCGATTATAAACCGGAAGTGTaGGGCGCCACGGGGCGCGAAGCGGCTCTTCTGGAAGACGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: AAPPGLTPCDYKPEV*GATGREAALLEDVS Trigger: CGAGACGTCTTCCAGAAGAGCCGCTTCGCGCCCCGTGGCGCCCCACACTTCCGGTTTATAATCGCAGGGCGTCAGGCCGGGCGGCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | CGGTGGCGAGAGTCCCACCGCACGGGCTTTCGTCACCCTGAGGGCTaGCCACGGCGCTGGCAGTCAGCTGCGGCATTTTCCGCACCGAAT | + |
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Preference number: 5 (lower is better) Translates to: RWRESHRTGFRHPEG*PRRWQSAAAFSAPN Trigger: ATTCGGTGCGGAAAATGCCGCAGCTGACTGCCAGCGCCGTGGTCAGCCCTCAGGGTGACGAAAGCCCGTGCGGTGGGACTCTCGCCACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | GGCTCCTTCTTGTCTCCGGGTGGTCGCGGGGCCGTGGGAGCAGGCTaGCCAGTGCCAAAGCGAGTGGCCAAGCTGTCACCAAAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSFLSPGGRGAVGAG*PVPKRVAKLSPKKE Trigger: CTCCTTCTTTGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCCCGCGACCACCCGGAGACAAGAAGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | TACGGCCGATCATGGGCAGCTTCTGCACGTAGCGGGACGCGGGGCTaGGCCCATATGGGGCAGGAAAGGCAGTTTGAAAGAGGCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: YGRSWAASARSGTRG*AHMGQERQFERGAR Trigger: GCGGGCGCCTCTTTCAAACTGCCTTTCCTGCCCCATATGGGCCCAGCCCCGCGTCCCGCTACGTGCAGAAGCTGCCCATGATCGGCCGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | GAGCGGCCACCTCGTCACTCAGCTCTAGACCTGTGCTCTCTGCCATaGGCCGGACCGACTCCCGAGGGATCTCCACAAACCTCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ERPPRHSALDLCSLP*AGPTPEGSPQTSSP Trigger: AGGAGAGGAGGTTTGTGGAGATCCCTCGGGAGTCGGTCCGGCTCATGGCAGAGAGCACAGGTCTAGAGCTGAGTGACGAGGTGGCCGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 90 bp | TCTTGTCTCCGGGTGGTCGCGGGGCCGTGGGAGCAGGCTGGCCAGTaGCAAAGCGAGTGGCCAAGCTGTCACCAAAGAAGGAGTATAGCT | + |
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Preference number: 5 (lower is better) Translates to: SCLRVVAGPWEQAGQ*QSEWPSCHQRRSIA Trigger: AGCTATACTCCTTCTTTGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCCCGCGACCACCCGGAGACAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 90 bp | CAGGCTCACTTCTCGATCCTCCGGGAAGTAGAGATCACCCTCCCTTaGAGGGCGCAAGGGCAATGCCTCCTGGGACCCATAGCCACACAC | + |
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Preference number: 5 (lower is better) Translates to: QAHFSILREVEITLP*RAQGQCLLGPIATH Trigger: GTGTGTGGCTATGGGTCCCAGGAGGCATTGCCCTTGCGCCCTGCAAGGGAGGGTGATCTCTACTTCCCGGAGGATCGAGAAGTGAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | GTGGTCGCGGGGCCGTGGGAGCAGGCTGGCCAGTGCCAAAGCGAGTaGCCAAGCTGTCACCAAAGAAGGAGTATAGCTCACGGTAGATGT | + |
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Preference number: 5 (lower is better) Translates to: VVAGPWEQAGQCQSE*PSCHQRRSIAHGRC Trigger: ACATCTACCGTGAGCTATACTCCTTCTTTGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCCCGCGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | CGGTACCCTCTCCCGCCAAGGCCACCGCGGTTGGGCTCTGCTGCCTaGGCTTTCATCTTCAATAGTCGTTCTACGGCCACCAGAATGGCT | + |
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Preference number: 5 (lower is better) Translates to: RYPLPPRPPRLGSAA*AFIFNSRSTATRMA Trigger: AGCCATTCTGGTGGCCGTAGAACGACTATTGAAGATGAAAGCTCAGGCAGCAGAGCCCAACCGCGGTGGCCTTGGCGGGAGAGGGTACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | GAAGGGCAGCCCCATCTCGCAGAGTCCAGTGGTCATTCAAAGGGTTaGTGGAGGCGGCCAGTGGCTCCAAGACACAGTAAAGCACGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EGQPHLAESSGHSKG*WRRPVAPRHSKARC Trigger: GCAGCGTGCTTTACTGTGTCTTGGAGCCACTGGCCGCCTCCATCAACCCTTTGAATGACCACTGGACTCTGCGAGATGGGGCTGCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | TCGCAGAGTCCAGTGGTCATTCAAAGGGTTGATGGAGGCGGCCAGTaGCTCCAAGACACAGTAAAGCACGCTGCCCACCAAGGATCGGAC | + |
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Preference number: 5 (lower is better) Translates to: SQSPVVIQRVDGGGQ*LQDTVKHAAHQGSD Trigger: GTCCGATCCTTGGTGGGCAGCGTGCTTTACTGTGTCTTGGAGCCACTGGCCGCCTCCATCAACCCTTTGAATGACCACTGGACTCTGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 90 bp | AGGTGTGGGTTCCGTATCAGGCTCCTTGCCACCTGCAGTAGTCGGTaGAGTTGTTCCAGGTCGTGGCTTACAGATTTTACCCCACTGACC | + |
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Preference number: 5 (lower is better) Translates to: RCGFRIRLLATCSSR*SCSRSWLTDFTPLT Trigger: GGTCAGTGGGGTAAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS GCA 90 bp | GGTCCCAAGCACAGGTGTGGGTTCCGTATCAGGCTCCTTGCCACCTaGAGTAGTCGGTGCAGTTGTTCCAGGTCGTGGCTTACAGATTTT | + |
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Preference number: 5 (lower is better) Translates to: GPKHRCGFRIRLLAT*SSRCSCSRSWLTDF Trigger: AAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCTGTGCTTGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 90 bp | GTGGGTCATCTCCCAGTACAGCCCGTGTCACTTGCTGGTAGTATTTaGGCAGGTCATCTGTCAGTGAAGACACTGCACTGGGCACTGATC | + |
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Preference number: 5 (lower is better) Translates to: VGHLPVQPVSLAGSI*AGHLSVKTLHWALI Trigger: GATCAGTGCCCAGTGCAGTGTCTTCACTGACAGATGACCTGCTCAAATACTACCAGCAAGTGACACGGGCTGTACTGGGAGATGACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 90 bp | CTTGGAGTTTGTCTGGAGGTCCTGGAGGGCAACCTTCATCAGCTGTaGGTCATCTCCCAGTACAGCCCGTGTCACTTGCTGGTAGTATTT | + |
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Preference number: 5 (lower is better) Translates to: LGVCLEVLEGNLHQL*VISQYSPCHLLVVF Trigger: AAATACTACCAGCAAGTGACACGGGCTGTACTGGGAGATGACCCACAGCTGATGAAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS CCA 90 bp | AGGCTCCTTGCCACCTGCAGTAGTCGGTGCAGTTGTTCCAGGTCGTaGCTTACAGATTTTACCTTCATCAGCTGTGGGTCATCTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: RLLATCSSRCSCSRS*LTDFTFISCGSSPS Trigger: ACTGGGAGATGACCCACAGCTGATGAAGGTAAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176496.8 ENSMUST00000189739.7 |
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| CDS GCA 90 bp | AGATTTTACCCCACTGACCACATAAACAAAGTAAGGCAGGAGTGCTaGAATCTTGGAGTTTGTCTGGAGGTCCTGGAGGGCAACCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: RFYPTDHINKVRQEC*NLGVCLEVLEGNLH Trigger: ATGAAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAGATTGCAGCACTCCTGCCTTACTTTGTTTATGTGGTCAGTGGGGTAAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS GCA 72 bp | GAGCACCCCGCGCCCGGTGTACGCGCGGTAGCGGCCTaGTCTCCGAGGCGGCGGTGGCGGTGGCGAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: EHPAPGVRAVAA*SPRRRWRWRES Trigger: GGACTCTCGCCACCGCCACCGCCGCCTCGGAGAGCAGGCCGCTACCGCGCGTACACCGGGCGCGGGGTGCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | TGGAAGACGTCTCGCGTTCCCGCGCCGGGGCCCTGCTaGCGAGGAGCACCCCGCGCCCGGTGTACGCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: WKTSRVPAPGPC*RGAPRARCTRG Trigger: ACCGCGCGTACACCGGGCGCGGGGTGCTCCTCGTCAGCAGGGCCCCGGCGCGGGAACGCGAGACGTCTTCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | GCGGTAGCGGCCTGCTCTCCGAGGCGGCGGTGGCGGTaGCGAGAGTCCCACCGCACGGGCTTTCGTCACCCT | + |
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Preference number: 6 (lower is better) Translates to: AVAACSPRRRWR*RESHRTGFRHP Trigger: AGGGTGACGAAAGCCCGTGCGGTGGGACTCTCGCCACCGCCACCGCCGCCTCGGAGAGCAGGCCGCTACCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 72 bp | CGCGGGGCTGGGCCCATATGGGGCAGGAAAGGCAGTTaGAAAGAGGCGCCCGCGGCAGCGCCGCCCGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGAGPIWGRKGS*KEAPAAAPPGL Trigger: CAGGCCGGGCGGCGCTGCCGCGGGCGCCTCTTTCAAACTGCCTTTCCTGCCCCATATGGGCCCAGCCCCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 90 bp | GTAGCGGGACGCGGGGCTGGGCCCATATGGGGCAGGAAAGGCAGTTaGAAAGAGGCGCCCGCGGCAGCGCCGCCCGGCCTGACGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VAGRGAGPIWGRKGS*KEAPAAAPPGLTPC Trigger: GCAGGGCGTCAGGCCGGGCGGCGCTGCCGCGGGCGCCTCTTTCAAACTGCCTTTCCTGCCCCATATGGGCCCAGCCCCGCGTCCCGCTAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | GTGGCGAGAGTCCCACCGCACGGGCTTTCGTCACCCTaGGGGCTGACCACGGCGCTGGCAGTCAGCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: VARVPPHGLSSP*GLTTALAVSCG Trigger: GCCGCAGCTGACTGCCAGCGCCGTGGTCAGCCCTCAGGGTGACGAAAGCCCGTGCGGTGGGACTCTCGCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | CGGGTGGTCGCGGGGCCGTGGGAGCAGGCTGGCCAGTaGCAAAGCGAGTGGCCAAGCTGTCACCAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RVVAGPWEQAGQ*QSEWPSCHQRR Trigger: CCTTCTTTGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCCCGCGACCACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | TTGTCTCCGGGTGGTCGCGGGGCCGTGGGAGCAGGCTaGCCAGTGCCAAAGCGAGTGGCCAAGCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: LSPGGRGAVGAG*PVPKRVAKLSP Trigger: TGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCCCGCGACCACCCGGAGACAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | GAGTCCCACCGCACGGGCTTTCGTCACCCTGAGGGCTaGCCACGGCGCTGGCAGTCAGCTGCGGCATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ESHRTGFRHPEG*PRRWQSAAAFS Trigger: GGAAAATGCCGCAGCTGACTGCCAGCGCCGTGGTCAGCCCTCAGGGTGACGAAAGCCCGTGCGGTGGGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | CCCGGCCTGACGCCCTGCGATTATAAACCGGAAGTGTaGGGCGCCACGGGGCGCGAAGCGGCTCTTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PGLTPCDYKPEV*GATGREAALLE Trigger: TTCCAGAAGAGCCGCTTCGCGCCCCGTGGCGCCCCACACTTCCGGTTTATAATCGCAGGGCGTCAGGCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 90 bp | CCAGGCTCACTTCTCGATCCTCCGGGAAGTAGAGATCACCCTCCCTaGCAGGGCGCAAGGGCAATGCCTCCTGGGACCCATAGCCACACA | + |
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Preference number: 6 (lower is better) Translates to: PGSLLDPPGSRDHPP*QGARAMPPGTHSHT Trigger: TGTGTGGCTATGGGTCCCAGGAGGCATTGCCCTTGCGCCCTGCAAGGGAGGGTGATCTCTACTTCCCGGAGGATCGAGAAGTGAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | CCTCGTCACTCAGCTCTAGACCTGTGCTCTCTGCCATaGGCCGGACCGACTCCCGAGGGATCTCCACAAACC | + |
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Preference number: 6 (lower is better) Translates to: PRHSALDLCSLP*AGPTPEGSPQT Trigger: GGTTTGTGGAGATCCCTCGGGAGTCGGTCCGGCTCATGGCAGAGAGCACAGGTCTAGAGCTGAGTGACGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | GGGCCGTGGGAGCAGGCTGGCCAGTGCCAAAGCGAGTaGCCAAGCTGTCACCAAAGAAGGAGTATAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GPWEQAGQCQSE*PSCHQRRSIAH Trigger: GTGAGCTATACTCCTTCTTTGGTGACAGCTTGGCCACTCGCTTTGGCACTGGCCAGCCTGCTCCCACGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | TCATGGGCAGCTTCTGCACGTAGCGGGACGCGGGGCTaGGCCCATATGGGGCAGGAAAGGCAGTTTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SWAASARSGTRG*AHMGQERQFER Trigger: TCTTTCAAACTGCCTTTCCTGCCCCATATGGGCCCAGCCCCGCGTCCCGCTACGTGCAGAAGCTGCCCATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | TTCTCGATCCTCCGGGAAGTAGAGATCACCCTCCCTTaGAGGGCGCAAGGGCAATGCCTCCTGGGACCCATA | + |
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Preference number: 6 (lower is better) Translates to: FSILREVEITLP*RAQGQCLLGPI Trigger: TATGGGTCCCAGGAGGCATTGCCCTTGCGCCCTGCAAGGGAGGGTGATCTCTACTTCCCGGAGGATCGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | AGGCGGCCAGTGGCTCCAAGACACAGTAAAGCACGCTaGCCACCAAGGATCGGACATAGGGTCCCAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: RRPVAPRHSKAR*PPRIGHRVPST Trigger: TGTGCTTGGGACCCTATGTCCGATCCTTGGTGGGCAGCGTGCTTTACTGTGTCTTGGAGCCACTGGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | CTGAGTAGAAGGGCAGCCCCATCTCGCAGAGTCCAGTaGTCATTCAAAGGGTTGATGGAGGCGGCCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LSRRAAPSRRVQ*SFKGLMEAASG Trigger: GCCACTGGCCGCCTCCATCAACCCTTTGAATGACCACTGGACTCTGCGAGATGGGGCTGCCCTTCTACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 72 bp | CACACAGCCTCCACGCTGCTCCACCTGAGAGCCCTGTaGAAGTCCTCCACCGTCAGCTTCCTTCGTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HTASTLLHLRAL*KSSTVSFLRLV Trigger: CACCAAACGAAGGAAGCTGACGGTGGAGGACTTCAACAGGGCTCTCAGGTGGAGCAGCGTGGAGGCTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 90 bp | GGACATAGGGTCCCAAGCACAGGTGTGGGTTCCGTATCAGGCTCCTaGCCACCTGCAGTAGTCGGTGCAGTTGTTCCAGGTCGTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GHRVPSTGVGSVSGS*PPAVVGAVVPGRGL Trigger: TAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCTGTGCTTGGGACCCTATGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | CACAGGTGTGGGTTCCGTATCAGGCTCCTTGCCACCTaGAGTAGTCGGTGCAGTTGTTCCAGGTCGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: HRCGFRIRLLAT*SSRCSCSRSWL Trigger: AAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | TGTCTGGAGGTCCTGGAGGGCAACCTTCATCAGCTGTaGGTCATCTCCCAGTACAGCCCGTGTCACTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CLEVLEGNLHQL*VISQYSPCHLL Trigger: CAGCAAGTGACACGGGCTGTACTGGGAGATGACCCACAGCTGATGAAGGTTGCCCTCCAGGACCTCCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS CAA 72 bp | ACTCTGACAGCTGTCTCTGCACAGCCCTTGGGGATGTaGGTGGCTAGTGCCAGCTCCACCAGGCTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: TLTAVSAQPLGM*VASASSTRLTS Trigger: AGAAGTGAGCCTGGTGGAGCTGGCACTAGCCACCAACATCCCCAAGGGCTGTGCAGAGACAGCTGTCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 72 bp | GTCCCAAGCACAGGTGTGGGTTCCGTATCAGGCTCCTaGCCACCTGCAGTAGTCGGTGCAGTTGTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VPSTGVGSVSGS*PPAVVGAVVPG Trigger: ACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCTGTGCTTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | CCCCATCTCGCAGAGTCCAGTGGTCATTCAAAGGGTTaGTGGAGGCGGCCAGTGGCTCCAAGACACAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: PHLAESSGHSKG*WRRPVAPRHSK Trigger: TTTACTGTGTCTTGGAGCCACTGGCCGCCTCCATCAACCCTTTGAATGACCACTGGACTCTGCGAGATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | AGGAGTGCTGCAATCTTGGAGTTTGTCTGGAGGTCCTaGAGGGCAACCTTCATCAGCTGTGGGTCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RSAAILEFVWRS*RATFISCGSSP Trigger: GGGAGATGACCCACAGCTGATGAAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAGATTGCAGCACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS CCA 72 bp | AGTCATCCAGCACAGCCTGCAAGTTTGTCCAGTAAGTaGGCAGATGTGGGTAGAGGACTCGCTCCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SHPAQPASLSSK*ADVGRGLAPLP Trigger: AGGCAGTGGAGCGAGTCCTCTACCCACATCTGCCCACTTACTGGACAAACTTGCAGGCTGTGCTGGATGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | CGTTCTACGGCCACCAGAATGGCTCCATACACTTTGTaGCCGTCCGCTTTGACCTGGGCATTAGATACGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSTATRMAPYTL*PSALTWALDTE Trigger: TTCCGTATCTAATGCCCAGGTCAAAGCGGACGGGCACAAAGTGTATGGAGCCATTCTGGTGGCCGTAGAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 72 bp | AGTCGTTCTACGGCCACCAGAATGGCTCCATACACTTaGTGCCCGTCCGCTTTGACCTGGGCATTAGATACG | + |
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Preference number: 6 (lower is better) Translates to: SRSTATRMAPYT*CPSALTWALDT Trigger: CGTATCTAATGCCCAGGTCAAAGCGGACGGGCACAAAGTGTATGGAGCCATTCTGGTGGCCGTAGAACGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | CTCCCAGTACAGCCCGTGTCACTTGCTGGTAGTATTTaGGCAGGTCATCTGTCAGTGAAGACACTGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LPVQPVSLAGSI*AGHLSVKTLHW Trigger: CCAGTGCAGTGTCTTCACTGACAGATGACCTGCTCAAATACTACCAGCAAGTGACACGGGCTGTACTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS GCA 72 bp | TTCCGTATCAGGCTCCTTGCCACCTGCAGTAGTCGGTaGAGTTGTTCCAGGTCGTGGCTTACAGATTTTACC | + |
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Preference number: 6 (lower is better) Translates to: FRIRLLATCSSR*SCSRSWLTDFT Trigger: GGTAAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | GCCACCTGCAGTAGTCGGTGCAGTTGTTCCAGGTCGTaGCTTACAGATTTTACCTTCATCAGCTGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ATCSSRCSCSRS*LTDFTFISCGS Trigger: TGACCCACAGCTGATGAAGGTAAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176496.8 ENSMUST00000189739.7 |
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| CDS CAA 90 bp | GAAGTCCTCCACCGTCAGCTTCCTTCGTTTGGTGTGTTTCATGAATaGAGAGCTATTCTGTGTGGCCTCTCGGAGACGGTAGCACACATC | + |
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Preference number: 6 (lower is better) Translates to: EVLHRQLPSFGVFHE*RAILCGLSETVAHI Trigger: GATGTGTGCTACCGTCTCCGAGAGGCCACACAGAATAGCTCTCAATTCATGAAACACACCAAACGAAGGAAGCTGACGGTGGAGGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS TCA 72 bp | CCTCCACCGTCAGCTTCCTTCGTTTGGTGTGTTTCATaGATTGAGAGCTATTCTGTGTGGCCTCTCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PPPSASFVWCVS*IESYSVWPLGD Trigger: GTCTCCGAGAGGCCACACAGAATAGCTCTCAATTCATGAAACACACCAAACGAAGGAAGCTGACGGTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CCA 72 bp | CCACATAAACAAAGTAAGGCAGGAGTGCTGCAATCTTaGAGTTTGTCTGGAGGTCCTGGAGGGCAACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PHKQSKAGVLQS*SLSGGPGGQPS Trigger: TGAAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAGATTGCAGCACTCCTGCCTTACTTTGTTTATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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| CDS CAA 72 bp | CACCGTCAGCTTCCTTCGTTTGGTGTGTTTCATGAATaGAGAGCTATTCTGTGTGGCCTCTCGGAGACGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRQLPSFGVFHE*RAILCGLSETV Trigger: TACCGTCTCCGAGAGGCCACACAGAATAGCTCTCAATTCATGAAACACACCAAACGAAGGAAGCTGACGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003777.5 ENSMUST00000176496.8 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 ENSMUST00000189739.7 |
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| CDS CAA 72 bp | AAACAAAGTAAGGCAGGAGTGCTGCAATCTTGGAGTTaGTCTGGAGGTCCTGGAGGGCAACCTTCATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KQSKAGVLQSWS*SGGPGGQPSSA Trigger: AGCTGATGAAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAGATTGCAGCACTCCTGCCTTACTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003777.5 ENSMUST00000176610.9 ENSMUST00000177056.8 ENSMUST00000177216.8 |
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