Pregenerated sensors for TAF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025049Ensembl transcript IDs: ENSMUST00000026027.7
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGTGTTTGATTGCACGCCAAACTTACATGGTAGGAACTGAGATGTaGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: KCLIARQTYMVGTEM*VDGCTCRLRKCGPY Trigger: GTAGGGACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTACCATGTAAGTTTGGCGTGCAATCAAACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| 3UTR GCA 72 bp | AAGCATGTTAGTGGGTCACTGAACACGCTGCTTGAGTaGCGTACAATAACCTCATTACAGCACACACACGTT | + |
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Preference number: 3 (lower is better) Translates to: KHVSGSLNTLLE*RTITSLQHTHV Trigger: AACGTGTGTGTGCTGTAATGAGGTTATTGTACGGCACTCAAGCAGCGTGTTCAGTGACCCACTAACATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| 3UTR-3UTR CAA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTAAACGTGGAACTGTCTaGTTCAGATTTTCCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SFHTIQSTINVPSTNIIPKRGTV*FRFSKQ Trigger: CTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| 3UTR TCA 72 bp | TTTCCAAAGCAAGGCTCAGTATTGGAGGTAAGCAACTaGAATGTCTGTCTGACTTCAAGTGTACTAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: FPKQGSVLEVSN*NVCLTSSVLGH Trigger: ATGACCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCCAATACTGAGCCTTGCTTTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | CCACTAATGGTGGGTGAAGGGAAGCATGTTAGTGGGTCACTGAACACGCTGCTTCCTCAGGCTCTAGCTTaGCCGCCACCTCCGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLMVGEGKHVSGSLNTLLPQALA*PPPPSA Trigger: AGCAGACGGAGGTGGCGGTCAAGCTAGAGCCTGAGG...AAGCAGCGTGTTCAGTGACCCACTAACATGCTTCCCTTCACCCACCATTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | CCACTAATGGTGGGTGAAGGGAAGCATGTTAGTGGGTCACTGAACACGCTGCTTCTCTGCCGGAGGAATTaGAGCACGGCCAGGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLMVGEGKHVSGSLNTLLLCRRN*STARRV Trigger: GACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAG...AAGCAGCGTGTTCAGTGACCCACTAACATGCTTCCCTTCACCCACCATTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTGCGCCGTCGCCAGCCTaGGGAGGTAGCAGCGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SFHTIQSTINVPSTNIIPAPSPA*GGSSVG Trigger: GCCGACGCTGCTACCTCCGCAGGCTGGCGACGGCGC...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGGCCGTTGTTGGGAGTaGCGCCGCTCCCCTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ETWNCLVQIFQAAYFQIHGRCWE*RRSPRL Trigger: CAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCC...ATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCACGCCGCCGCCGCCGTTaGGGCCGTTGTTGGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: NVVAIETWNCLVQIFQAARRRRR*GRCWEC Trigger: GCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCG...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTAACCGCCACCTCCGTCTaGTCCTCCGCCAGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: IQSTINVPSTNIIPLIQLTATSV*SSASAA Trigger: GGCGGCGCTGGCGGAGGAGCAGACGGAGGTGGCGGT...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTCGGCCTCGCGGAGGTTaGTCTGCCGGAGGAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGRPRGG*SAGGIA Trigger: TGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCG...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTTCGTTTCGCCTCTCCTaGCAGGCTGCCCACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGSFRLS*QAAHHG Trigger: GCCATGGTGGGCAGCCTGGCAGGAGAGGCGAAACGA...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGCGTTGGGGCCGTTGTTaGGAGTGCCGCCGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMRWGRC*ECRRSP Trigger: AGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACG...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | CCACTAATGGTGGGTGAAGGGAAGCATGTTAGTGGGTCACTGAACACGCTGCTTCCACACTCTGACAGTTaGATCAGCAAAACCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLMVGEGKHVSGSLNTLLPHSDS*ISKTSS Trigger: GCTGGAGGTTTTGCTGATTCAACTGTCAGAGTGTGG...AAGCAGCGTGTTCAGTGACCCACTAACATGCTTCCCTTCACCCACCATTAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCCGACAAGACAGCACTaGCGTCTGGCTGGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFHTIQSTINVPSTNIIPPTRQH*RLAGLP Trigger: TGGAAGACCAGCCAGACGTCAGTGCTGTCTTGTCGG...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GCAAGGCTCAGTATTGGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTTTCCACAGCTACACTTaGAACCTTTCCCGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ARLSIGGKQLKCLSDFKCFHSYT*NLSRSR Trigger: GCGGCTCCGGGAAAGGTTGCAAGTGTAGCTGTGGAA...ACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCCAATACTGAGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | GCAAGGCTCAGTATTGGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTGACAGCACTGACGTCTaGCTGGTCTTCCACAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: ARLSIGGKQLKCLSDFKCDSTDV*LVFHSY Trigger: GTAGCTGTGGAAGACCAGCCAGACGTCAGTGCTGTC...ACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCCAATACTGAGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | CCACTAATGGTGGGTGAAGGGAAGCATGTTAGTGGGTCACTGAACACGCTGCTTTCGTTCCCTTTCATGTaGTCCTTTTTGGTAAGACTA | + |
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Preference number: 4 (lower is better) Translates to: PLMVGEGKHVSGSLNTLLSFPFM*SFLVRL Trigger: TAGTCTTACCAAAAAGGAGCACATGAAAGGGAACGA...AAGCAGCGTGTTCAGTGACCCACTAACATGCTTCCCTTCACCCACCATTAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATCGATCTGTTGCTTACTaGGAGGCATCCCGTCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ETWNCLVQIFQAAYFQIHRSVAY*EASRRR Trigger: TCTTCGACGGGATGCCTCGCAGTAAGCAACAGATCG...ATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATATCAGTGACATCCACTaGAGTGAGGCCCTGGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: ETWNCLVQIFQAAYFQIHISDIH*SEALVS Trigger: GCTTACCAGGGCCTCACTGCAGTGGATGTCACTGAT...ATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTTACTCTGCCATCTGTTaGTCCTGTAGCCAGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGYSAIC*SCSQES Trigger: AGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTA...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | GGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTACTAGGTCATATGTAAGTTCCTATCCGGACTaGAGCTGGCTCCATAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GGKQLKCLSDFKCTRSYVSSYPD*SWLHRQ Trigger: CTGTCTATGGAGCCAGCTTCAGTCCGGATAGGAACT...TACATATGACCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATGCTTCTCCTGGAGATaGCGCTTCAAGAGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: NVVAIETWNCLVQIFQAACFSWR*RFKSWY Trigger: GTACCAGCTCTTGAAGCGGCATCTCCAGGAGAAGCA...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | GGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTACTAGGTCATATGTACCGCACAGTTCTGTCTaGAGAGCCCGTAGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: GGKQLKCLSDFKCTRSYVPHSSV*RARSNI Trigger: TATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGG...TACATATGACCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCAGCACTGACGTCTGGCTaGTCTTCCACAGCTACACTT | + |
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Preference number: 4 (lower is better) Translates to: NVVAIETWNCLVQIFQAAALTSG*SSTATL Trigger: AAGTGTAGCTGTGGAAGACCAGCCAGACGTCAGTGC...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | GCAAGGCTCAGTATTGGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTTCCGAAAGTCCAGCATaGTCTCGTTCCCTTTCATGT | + |
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Preference number: 4 (lower is better) Translates to: ARLSIGGKQLKCLSDFKCSESPA*SRSLSC Trigger: ACATGAAAGGGAACGAGACCATGCTGGACTTTCGGA...ACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCCAATACTGAGCCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | GCAAGGCTCAGTATTGGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTGAAAATGTCAAGGAATaGATTGGTCCCTTGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ARLSIGGKQLKCLSDFKCENVKE*IGPLCP Trigger: TGGGCACAAGGGACCAATTCATTCCTTGACATTTTC...ACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCCAATACTGAGCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | GGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTACTAGGTCATATGTATTGTTCTGCTTCTCCTaGAGATGCCGCTTCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGKQLKCLSDFKCTRSYVLFCFS*RCRFKS Trigger: GCTCTTGAAGCGGCATCTCCAGGAGAAGCAGAACAA...TACATATGACCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTCACACTGTATCAGTGTaGCCTTTTAATTCTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGHTVSV*PFNSPT Trigger: GGTTGGAGAATTAAAAGGCCACACTGATACAGTGTG...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| 3UTR CAA 72 bp | ATTGCACGCCAAACTTACATGGTAGGAACTGAGATGTaGGTGGATGGCTGTACATGTAGACTTAGGAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: IARQTYMVGTEM*VDGCTCRLRKC Trigger: ACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTACCATGTAAGTTTGGCGTGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGTCACAGACCACACTCTaGCAGTTGAATCAGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMSQTTL*QLNQQN Trigger: GTTTTGCTGATTCAACTGTCAGAGTGTGGTCTGTGA...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAAACCCAACCAAGCAAGTaGAAGTCTGAAGGCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LITEVFAFSLPFPNSSFQTQPSK*KSEGSR Trigger: TCTGGAGCCTTCAGACTTTCACTTGCTTGGTTGGGT...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTGTGTACAACTGGTGTTaGTTTGGTCATATATGTACC | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGVYNWC*FGHICT Trigger: GGTACATATATGACCAAATCAACACCAGTTGTACAC...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGTCAGGTAGGTTTATATaGCCGGTGGCTGTAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMSGRFI*PVAVVK Trigger: CTTTACTACAGCCACCGGGCATATAAACCTACCTGA...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTATGTATAGAAACAAATaGAGGGTAAACAGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGMYRNK*RVNSLA Trigger: GGCCAGACTGTTTACCCTCCATTTGTTTCTATACAT...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| 3UTR CAA 72 bp | GTGGAATCTAAATCTCCTCACCTGCTTTGTAAGTGTTaGATTGCACGCCAAACTTACATGGTAGGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: VESKSPHLLCKC*IARQTYMVGTE Trigger: CTCAGTTCCTACCATGTAAGTTTGGCGTGCAATCAAACACTTACAAAGCAGGTGAGGAGATTTAGATTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | GAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATCCAGAGAACATTCAATaGAGTGTTTCAGTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: ETWNCLVQIFQAAYFQIHPENIQ*SVSVHC Trigger: ACAGTGGACTGAAACACTTCATTGAATGTTCTCTGG...ATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAAACGATGTTCCAGATCTaGTTGTTCTGCTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LITEVFAFSLPFPNSSFQTMFQI*LFCFSW Trigger: CCAGGAGAAGCAGAACAATCAGATCTGGAACATCGT...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAATCGGTCATGGCCTCCTaGCACGAAATAATATCCGTA | + |
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Preference number: 4 (lower is better) Translates to: LITEVFAFSLPFPNSSFQSVMAS*HEIISV Trigger: TACGGATATTATTTCGTGTCAGGAGGCCATGACCGA...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGCTGTGTGTCCCATACTaGGTAGTTGTGTCCTTTATA | + |
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Preference number: 4 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMLCVPY*VVVSFI Trigger: TATAAAGGACACAACTACCCAGTATGGGACACACAG...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR TCA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTTCTACTAAACCTAAGTaGACACACTGTATCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SFHTIQSTINVPSTNIIPSTKPK*THCISV Trigger: CACACTGATACAGTGTGTTCACTTAGGTTTAGTAGA...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTATGTCAAGGAATGAATTaGTCCCTTGTGCCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IQSTINVPSTNIIPLIQLCQGMN*SLVPSE Trigger: TTCACTGGGCACAAGGGACCAATTCATTCCTTGACA...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCACCCAATAACAACTCCTaGGAATTCTCAGGTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: NVVAIETWNCLVQIFQAAPNNNS*EFSGRF Trigger: AAACCTACCTGAGAATTCCCAGGAGTTGTTATTGGG...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR GCA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTAAATCTTCAACTCACTTaGAGTTTTCTCATCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: IQSTINVPSTNIIPLIQLNLQLT*SFLIHD Trigger: ATCATGGATGAGAAAACTGCAAGTGAGTTGAAGATT...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CCA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAACAACTGGTGTTGATTTaGTCATATATGTACCCAATA | + |
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Preference number: 4 (lower is better) Translates to: LITEVFAFSLPFPNSSFQQLVLI*SYMYPI Trigger: TATTGGGTACATATATGACCAAATCAACACCAGTTG...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS TCA 90 bp | CGAGGCGCCCGTCCCCGGAGGCTCGGGGGCCGCAGAGCCGGGAACTaGAGCGGTGACCCGGCTGAGAAGCGCGCTGGCCGCCTCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGARPRRLGGRRAGN*SGDPAEKRAGRLRA Trigger: GGCGCGGAGGCGGCCAGCGCGCTTCTCAGCCGGGTCACCGCTTCAGTTCCCGGCTCTGCGGCCCCCGAGCCTCCGGGGACGGGCGCCTCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CCA 90 bp | CGCCGGCCGCCGCTGCCACTGCCACATTCCCGCCGCCGCCGCCGTTaGGGCCGTTGTTGGGAGTGCCGCCGCTCCCCTCGCCTGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RRPPLPLPHSRRRRR*GRCWECRRSPRLRR Trigger: ACGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGGCAGTGGCAGCGGCGGCCGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS GCA 90 bp | CTGCCACATTCCCGCCGCCGCCGCCGTTGGGGCCGTTGTTGGGAGTaGCGCCGCTCCCCTCGCCTGCGCCGTCGCCAGCCTGCGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPHSRRRRRWGRCWE*RRSPRLRRRQPAEV Trigger: TACCTCCGCAGGCTGGCGACGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGGCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | CGCAGCGCCTCTTCGGCCTCGCGGAGGTTGCTCTGCCGGAGGAATTaGAGCACGGCCAGGAGGGTCTGTCGGTCGTGGGGAGCGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSASSASRRLLCRRN*STARRVCRSWGAPA Trigger: GGCCGGCGCTCCCCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | CGGGCCTCCCGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTTGCTCTaGCGGAGGAATTGCAGCACGGCCAGGAGGGTCTGTCGGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RASRRSASSASRRLL*RRNCSTARRVCRSW Trigger: CCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCGGGAGGCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | GCAGCCGGGCCTCCCGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTTaGTCTGCCGGAGGAATTGCAGCACGGCCAGGAGGGTCTGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGPPGAAPLRPRGG*SAGGIAARPGGSVG Trigger: ACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCGGGAGGCCCGGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | TTGTTGGGAGTGCCGCCGCTCCCCTCGCCTGCGCCGTCGCCAGCCTaGGGAGGTAGCAGCGTCGGCGGTCCCTCAGGCTCTAGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVPPLPSPAPSPA*GGSSVGGPSGSSLT Trigger: GGTCAAGCTAGAGCCTGAGGGACCGCCGACGCTGCTACCTCCGCAGGCTGGCGACGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | ATACCTTCGATTTGTTCGCCTCTCGTTTCGCCTCTCCTGCCAGGCTaGCCACCATGGCGTCGATCTGTTGCTTACTGCGAGGCATCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IPSICSPLVSPLLPG*PPWRRSVAYCEASR Trigger: ACGGGATGCCTCGCAGTAAGCAACAGATCGACGCCATGGTGGGCAGCCTGGCAGGAGAGGCGAAACGAGAGGCGAACAAATCGAAGGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CCA 90 bp | AGGGTCTCCTTGTTGGTTGTAGGCCGACAAGACAGCACTGACGTCTaGCTGGTCTTCCACAGCTACACTTGCAACCTTTCCCGGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVSLLVVGRQDSTDV*LVFHSYTCNLSRSR Trigger: GCGGCTCCGGGAAAGGTTGCAAGTGTAGCTGTGGAAGACCAGCCAGACGTCAGTGCTGTCTTGTCGGCCTACAACCAACAAGGAGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | CCACTAATGGTGGGTGAAGGGAAGCATGTTAGTGGGTCACTGAACACGCTGCTTTCGGCCTCGCGGAGGTaGCTCTGCCGGAGGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLMVGEGKHVSGSLNTLLSASRR*LCRRNC Trigger: GCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGA...AAGCAGCGTGTTCAGTGACCCACTAACATGCTTCCCTTCACCCACCATTAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGCCGCCGTTGGGGCCGTaGTTGGGAGTGCCGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMPPLGP*LGVPPL Trigger: GAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGG...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS GCA 90 bp | TCTCCTGGAGATGCCGCTTCAAGAGCTGGTACGAGTCCCGGGAAATaGGGAGAACGAATTTACTCGTCCGAAAGTCCAGCATGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGDAASRAGTSPGK*GERIYSSESPAWSR Trigger: ACGAGACCATGCTGGACTTTCGGACGAGTAAATTCGTTCTCCGCATTTCCCGGGACTCGTACCAGCTCTTGAAGCGGCATCTCCAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCACCGTTGGGGCCGTTGTaGGGAGTGCCGCCGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NVVAIETWNCLVQIFQAAPLGPL*GVPPLP Trigger: GGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGG...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTACCGCCGCCGCCGCCGTaGGGGCCGTTGTTGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IQSTINVPSTNIIPLIQLPPPPP*GPLLGV Trigger: CACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGG...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAAGCAACTGAAATGTCTGTCTGACTTCAAGTGTACTAGGTCATATGTACCCTCAGGCTCTAGCTaGACCGCCACCTCCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGKQLKCLSDFKCTRSYVPSGSS*TATSVC Trigger: GCAGACGGAGGTGGCGGTCAAGCTAGAGCCTGAGGG...TACATATGACCTAGTACACTTGAAGTCAGACAGACATTTCAGTTGCTTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTAGCTCTGCCGGAGGAATaGCAGCACGGCCAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQSTINVPSTNIIPLIQLALPEE*QHGQEG Trigger: ACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGC...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS TCA 90 bp | ATAGTGATCGGTAGCCCAAAGCCGAGCTACTCGGTCATGGCCTCCTaGCACGAAATAATATCCGTATGGAGAAAACTGTGTGTCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: IVIGSPKPSYSVMAS*HEIISVWRKLCVPY Trigger: GTATGGGACACACAGTTTTCTCCATACGGATATTATTTCGTGTCAGGAGGCCATGACCGAGTAGCTCGGCTTTGGGCTACCGATCACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | CATCAAGCCGTGTCCAATATCCCAAAGAAGTACTCTGCCATCTGTTaGTCCTGTAGCCAGGAATCTCCCATTGGGAGAAAATGTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQAVSNIPKKYSAIC*SCSQESPIGRKCQG Trigger: TCCTTGACATTTTCTCCCAATGGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTACTTCTTTGGGATATTGGACACGGCTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | TACACAGTTACCATTGAGGACATCCCAGAGCCGCACAGTTCTGTCTaGAGAGCCCGTAGCAACATAGTTCGAATTTGGATGAAATCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTVTIEDIPEPHSSV*RARSNIVRIWMKSS Trigger: ACTAGATTTCATCCAAATTCGAACTATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGGCTCTGGGATGTCCTCAATGGTAACTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 90 bp | CCGCACAGTTCTGTCTGCAGAGCCCGTAGCAACATAGTTCGAATTTaGATGAAATCTAGTGCAATTCACATCAGCAAGATGGCCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PHSSVCRARSNIVRI*MKSSAIHISKMASK Trigger: TTTGCTGGCCATCTTGCTGATGTGAATTGCACTAGATTTCATCCAAATTCGAACTATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS-3UTR CAA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAACATGGCGTCGATCTGTaGCTTACTGCGAGGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LITEVFAFSLPFPNSSFQHGVDL*LTARHP Trigger: GGGATGCCTCGCAGTAAGCAACAGATCGACGCCATG...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTACACAGTTACCATaGAGGACATCCCAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SFHTIQSTINVPSTNIIPLTQLP*RTSQSR Trigger: GCGGCTCTGGGATGTCCTCAATGGTAACTGTGTAAG...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTGCCAGGAATCTCCCATaGGGAGAAAATGTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGARNLP*GENVKE Trigger: TTCCTTGACATTTTCTCCCAATGGGAGATTCCTGGC...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS GCA 90 bp | AATTTACTCGTCCGAAAGTCCAGCATGGTCTCGTTCCCTTTCATGTaGTCCTTTTTGGTAAGACTAGATAACACTCGTAGGTCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLLVRKSSMVSFPFM*SFLVRLDNTRRSSW Trigger: CCAGGATGACCTACGAGTGTTATCTAGTCTTACCAAAAAGGAGCACATGAAAGGGAACGAGACCATGCTGGACTTTCGGACGAGTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | GAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATCATTGTAGGGTCTCCTaGTTGGTTGTAGGCCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: ETWNCLVQIFQAAYFQIHHCRVS*LVVGRQ Trigger: TTGTCGGCCTACAACCAACAAGGAGACCCTACAATG...ATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAATGTAGGGTCTCCTTGTaGGTTGTAGGCCGACAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LITEVFAFSLPFPNSSFQCRVSL*VVGRQD Trigger: GTCTTGTCGGCCTACAACCAACAAGGAGACCCTACA...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCATACTTCCAGATCCATGCCGAGGCGCACTCGTTaGGTAGTTTCTTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: KRGTVLFRFSKQHTSRSMPRRTR*VVSFIF Trigger: GAATATGAAAGAAACTACCAAACGAGTGCGCCTCGG...CATGGATCTGGAAGTATGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 90 bp | TATGTACCCAATAACAACTCCTGGGAATTCTCAGGTAGGTTTATATaGCCGGTGGCTGTAGTAAAGTCATCAGTCTCTAAGTCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YVPNNNSWEFSGRFI*PVAVVKSSVSKSSN Trigger: GTTTGAAGACTTAGAGACTGATGACTTTACTACAGCCACCGGGCATATAAACCTACCTGAGAATTCCCAGGAGTTGTTATTGGGTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 90 bp | ACAACTGGTGTTGATTTGGTCATATATGTACCCAATAACAACTCCTaGGAATTCTCAGGTAGGTTTATATGCCCGGTGGCTGTAGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGVDLVIYVPNNNS*EFSGRFICPVAVVK Trigger: CTTTACTACAGCCACCGGGCATATAAACCTACCTGAGAATTCCCAGGAGTTGTTATTGGGTACATATATGACCAAATCAACACCAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | GTAGGAACTGAGATGTTGGTGGATGGCTGTACATGTAGACTTAGGAAGTGTGGTAGATCTGATGCTTGTTaGACACTACGAAGCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VGTEMLVDGCTCRLRKCGRSDAC*TLRSFL Trigger: TAAAAAGCTTCGTAGTGTCAAACAAGCATCAGATCT...ACCACACTTCCTAAGTCTACATGTACAGCCATCCACCAACATCTCAGTTCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | CTAATCACTGAGGTATTTGCTTTTAGTCTCCCTTTTCCAAACAGTAGCTTCCAAAAAAATACCTTCGATTaGTTCGCCTCTCGTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LITEVFAFSLPFPNSSFQKNTFD*FASRFA Trigger: GGCGAAACGAGAGGCGAACAAATCGAAGGTATTTTT...TTGGAAGCTACTGTTTGGAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTAG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AGTTTCCACACAATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTGGACTGTATTATCCATaGAACCTGATGCCAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SFHTIQSTINVPSTNIIPGLYYP*NLMPKF Trigger: AAATTTTGGCATCAGGTTCAATGGATAATACAGTCC...AGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGATTGTGTGGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCAGGTGTACAACTGGTGTaGATTTGGTCATATATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NVVAIETWNCLVQIFQAAGVQLV*IWSYMY Trigger: GTACATATATGACCAAATCAACACCAGTTGTACACC...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | AATGTGGTTGCTATAGAAACGTGGAACTGTCTTGTTCAGATTTTCCAAGCAGCAACAACTGGTGTTGATTaGGTCATATATGTACCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NVVAIETWNCLVQIFQAATTGVD*VIYVPN Trigger: ATTGGGTACATATATGACCAAATCAACACCAGTTGT...TGCTGCTTGGAAAATCTGAACAAGACAGTTCCACGTTTCTATAGCAACCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGCACCATAAATGTCCCCTCCACGAACATAATACCTCTTATTCAACTATTCATGTGCTCCTTTTaGGTAAGACTAGATAACACT | + |
|
Preference number: 5 (lower is better) Translates to: IQSTINVPSTNIIPLIQLFMCSF*VRLDNT Trigger: AGTGTTATCTAGTCTTACCAAAAAGGAGCACATGAA...TAGTTGAATAAGAGGTATTATGTTCGTGGAGGGGACATTTATGGTGCTTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 90 bp | CCGCCGGCCGCCGCTGCCACTGCCACATTCCCGCCGCCGCCGCCGTaGGGGCCGTTGTTGGGAGTGCCGCCGCTCCCCTCGCCTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPAAAATATFPPPPP*GPLLGVPPLPSPAP Trigger: CGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGGCAGTGGCAGCGGCGGCCGGCGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | TCCCGCCGCCGCCGCCGTTGGGGCCGTTGTTGGGAGTaGCGCCGCTCCCCTCGCCTGCGCCGTCGCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRRRRWGRCWE*RRSPRLRRRQP Trigger: AGGCTGGCGACGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CCA 72 bp | CCACATTCCCGCCGCCGCCGCCGTTGGGGCCGTTGTTaGGAGTGCCGCCGCTCCCCTCGCCTGCGCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PHSRRRRRWGRC*ECRRSPRLRRR Trigger: GCGACGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS TCA 72 bp | CGTCCCCGGAGGCTCGGGGGCCGCAGAGCCGGGAACTaGAGCGGTGACCCGGCTGAGAAGCGCGCTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPRRLGGRRAGN*SGDPAEKRAGR Trigger: GCGGCCAGCGCGCTTCTCAGCCGGGTCACCGCTTCAGTTCCCGGCTCTGCGGCCCCCGAGCCTCCGGGGACG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS GCA 72 bp | GTGCCGCCGCTCCCCTCGCCTGCGCCGTCGCCAGCCTaGGGAGGTAGCAGCGTCGGCGGTCCCTCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPPLPSPAPSPA*GGSSVGGPSGS Trigger: AGAGCCTGAGGGACCGCCGACGCTGCTACCTCCGCAGGCTGGCGACGGCGCAGGCGAGGGGAGCGGCGGCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CAA 72 bp | ACTGCCACATTCCCGCCGCCGCCGCCGTTGGGGCCGTaGTTGGGAGTGCCGCCGCTCCCCTCGCCTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TATFPPPPPLGP*LGVPPLPSPAP Trigger: CGGCGCAGGCGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGGCAGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CAA 72 bp | GCCGCTGCCACTGCCACATTCCCGCCGCCGCCGCCGTaGGGGCCGTTGTTGGGAGTGCCGCCGCTCCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAATATFPPPPP*GPLLGVPPLPS Trigger: CGAGGGGAGCGGCGGCACTCCCAACAACGGCCCCAACGGCGGCGGCGGCGGGAATGTGGCAGTGGCAGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CCA 72 bp | AGGAATTGCAGCACGGCCAGGAGGGTCTGTCGGTCGTaGGGAGCGCCGGCCTCCGCCGGAGCGGCGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RNCSTARRVCRS*GAPASAGAAGT Trigger: GGTGCCCGCCGCTCCGGCGGAGGCCGGCGCTCCCCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CAA 90 bp | GCGCAGCGCCTCTTCGGCCTCGCGGAGGTTGCTCTGCCGGAGGAATaGCAGCACGGCCAGGAGGGTCTGTCGGTCGTGGGGAGCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQRLFGLAEVALPEE*QHGQEGLSVVGSAG Trigger: GCCGGCGCTCCCCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CAA 90 bp | AGCAGCCGGGCCTCCCGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTaGCTCTGCCGGAGGAATTGCAGCACGGCCAGGAGGGTCTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRASRRSASSASRR*LCRRNCSTARRVCR Trigger: CCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCGGGAGGCCCGGCTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS GCA 72 bp | CCTCCCGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTTaGTCTGCCGGAGGAATTGCAGCACGGCCAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGAAPLRPRGG*SAGGIAARPGG Trigger: CCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCGGGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
||
| CDS CAA 72 bp | GCCTCCCGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTaGCTCTGCCGGAGGAATTGCAGCACGGCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRRSASSASRR*LCRRNCSTARR Trigger: CCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCGGGAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | CGGCGCAGCGCCTCTTCGGCCTCGCGGAGGTTGCTCTaGCGGAGGAATTGCAGCACGGCCAGGAGGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RRSASSASRRLL*RRNCSTARRVC Trigger: ACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAGGCGCTGCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 72 bp | CTCTTCGGCCTCGCGGAGGTTGCTCTGCCGGAGGAATaGCAGCACGGCCAGGAGGGTCTGTCGGTCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LFGLAEVALPEE*QHGQEGLSVVG Trigger: CCCCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | TCTTCGGCCTCGCGGAGGTTGCTCTGCCGGAGGAATTaGAGCACGGCCAGGAGGGTCTGTCGGTCGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSASRRLLCRRN*STARRVCRSWG Trigger: TCCCCACGACCGACAGACCCTCCTGGCCGTGCTGCAATTCCTCCGGCAGAGCAACCTCCGCGAGGCCGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | TCTCCTGCCAGGCTGCCCACCATGGCGTCGATCTGTTaGTTACTGCGAGGCATCCCGTCGAAGATGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SPARLPTMASIC*LLRGIPSKMSM Trigger: CATCGACATCTTCGACGGGATGCCTCGCAGTAAGCAACAGATCGACGCCATGGTGGGCAGCCTGGCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS TCA 72 bp | GGTCTCCTTGTTGGTTGTAGGCCGACAAGACAGCACTaGCGTCTGGCTGGTCTTCCACAGCTACACTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GLLVGCRPTRQH*RLAGLPQLHLQ Trigger: TTGCAAGTGTAGCTGTGGAAGACCAGCCAGACGTCAGTGCTGTCTTGTCGGCCTACAACCAACAAGGAGACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | GATGCCGCTTCAAGAGCTGGTACGAGTCCCGGGAAATaGGGAGAACGAATTTACTCGTCCGAAAGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DAASRAGTSPGK*GERIYSSESPA Trigger: TGCTGGACTTTCGGACGAGTAAATTCGTTCTCCGCATTTCCCGGGACTCGTACCAGCTCTTGAAGCGGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 72 bp | TTGTTGGTTGTAGGCCGACAAGACAGCACTGACGTCTaGCTGGTCTTCCACAGCTACACTTGCAACCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLVVGRQDSTDV*LVFHSYTCNLS Trigger: GGAAAGGTTGCAAGTGTAGCTGTGGAAGACCAGCCAGACGTCAGTGCTGTCTTGTCGGCCTACAACCAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | ACCATTGAGGACATCCCAGAGCCGCACAGTTCTGTCTaGAGAGCCCGTAGCAACATAGTTCGAATTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: TIEDIPEPHSSV*RARSNIVRIWM Trigger: CATCCAAATTCGAACTATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGGCTCTGGGATGTCCTCAATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 72 bp | CCCTTGTGCCCAGTGAAGATTCTTACACAGTTACCATaGAGGACATCCCAGAGCCGCACAGTTCTGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PLCPVKILTQLP*RTSQSRTVLSA Trigger: TGCAGACAGAACTGTGCGGCTCTGGGATGTCCTCAATGGTAACTGTGTAAGAATCTTCACTGGGCACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS TCA 72 bp | GGTAGCCCAAAGCCGAGCTACTCGGTCATGGCCTCCTaGCACGAAATAATATCCGTATGGAGAAAACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSPKPSYSVMAS*HEIISVWRKLC Trigger: ACACAGTTTTCTCCATACGGATATTATTTCGTGTCAGGAGGCCATGACCGAGTAGCTCGGCTTTGGGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | GTCCGAAAGTCCAGCATGGTCTCGTTCCCTTTCATGTaGTCCTTTTTGGTAAGACTAGATAACACTCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VRKSSMVSFPFM*SFLVRLDNTRR Trigger: CCTACGAGTGTTATCTAGTCTTACCAAAAAGGAGCACATGAAAGGGAACGAGACCATGCTGGACTTTCGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | GTGTCCAATATCCCAAAGAAGTACTCTGCCATCTGTTaGTCCTGTAGCCAGGAATCTCCCATTGGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VSNIPKKYSAIC*SCSQESPIGRK Trigger: TTTTCTCCCAATGGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTACTTCTTTGGGATATTGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 72 bp | TCCAGCATGGTCTCGTTCCCTTTCATGTGCTCCTTTTaGGTAAGACTAGATAACACTCGTAGGTCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSMVSFPFMCSF*VRLDNTRRSSW Trigger: CCAGGATGACCTACGAGTGTTATCTAGTCTTACCAAAAAGGAGCACATGAAAGGGAACGAGACCATGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | TCCAGCAATCAGACTAGAGTCATCAGTGACATCCACTaGAGTGAGGCCCTGGTAAGCATTAAGGAATGTATA | + |
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Preference number: 6 (lower is better) Translates to: SSNQTRVISDIH*SEALVSIKECI Trigger: TATACATTCCTTAATGCTTACCAGGGCCTCACTGCAGTGGATGTCACTGATGACTCTAGTCTGATTGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS TCA 72 bp | TTGTGTCCTTTATACCCAACCAAGCAAGTGAAAGTCTaGAGGCTCCAGAGTCTAACAGTTCCATCCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LCPLYPTKQVKV*RLQSLTVPSSE Trigger: TTCAGAGGATGGAACTGTTAGACTCTGGAGCCTTCAGACTTTCACTTGCTTGGTTGGGTATAAAGGACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS GCA 72 bp | AATAACAACTCCTGGGAATTCTCAGGTAGGTTTATATaGCCGGTGGCTGTAGTAAAGTCATCAGTCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: NNNSWEFSGRFI*PVAVVKSSVSK Trigger: CTTAGAGACTGATGACTTTACTACAGCCACCGGGCATATAAACCTACCTGAGAATTCCCAGGAGTTGTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 72 bp | TCTGTCTGCAGAGCCCGTAGCAACATAGTTCGAATTTaGATGAAATCTAGTGCAATTCACATCAGCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SVCRARSNIVRI*MKSSAIHISKM Trigger: CATCTTGCTGATGTGAATTGCACTAGATTTCATCCAAATTCGAACTATGTTGCTACGGGCTCTGCAGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 72 bp | GTTGATTTGGTCATATATGTACCCAATAACAACTCCTaGGAATTCTCAGGTAGGTTTATATGCCCGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VDLVIYVPNNNS*EFSGRFICPVA Trigger: AGCCACCGGGCATATAAACCTACCTGAGAATTCCCAGGAGTTGTTATTGGGTACATATATGACCAAATCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 72 bp | GTAGTAAAGTCATCAGTCTCTAAGTCTTCAAACGCTTaGACGGCGTCCCATAACCGGACTGTATTATCCATT | + |
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Preference number: 6 (lower is better) Translates to: VVKSSVSKSSNA*TASHNRTVLSI Trigger: AATGGATAATACAGTCCGGTTATGGGACGCCGTCAAAGCGTTTGAAGACTTAGAGACTGATGACTTTACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CCA 72 bp | ATAATATCCGTATGGAGAAAACTGTGTGTCCCATACTaGGTAGTTGTGTCCTTTATACCCAACCAAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: IISVWRKLCVPY*VVVSFIPNQAS Trigger: ACTTGCTTGGTTGGGTATAAAGGACACAACTACCCAGTATGGGACACACAGTTTTCTCCATACGGATATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS TCA 72 bp | ATAACTCTGCTCGATGGCAGTCCAGAGAACATTCAATaGAGTGTTTCAGTCCACTGTAGTATTCTTCATACA | + |
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Preference number: 6 (lower is better) Translates to: ITLLDGSPENIQ*SVSVHCSILHT Trigger: TGTATGAAGAATACTACAGTGGACTGAAACACTTCATTGAATGTTCTCTGGACTGCCATCGAGCAGAGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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| CDS CAA 90 bp | ACCAAGTTTCTTCTTGTAAAATGTAGGTGTACAACTGGTGTTGATTaGGTCATATATGTACCCAATAACAACTCCTGGGAATTCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TKFLLVKCRCTTGVD*VIYVPNNNSWEFSG Trigger: ACCTGAGAATTCCCAGGAGTTGTTATTGGGTACATATATGACCAAATCAACACCAGTTGTACACCTACATTTTACAAGAAGAAACTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026027.7 |
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