Pregenerated sensors for TAF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039117Ensembl transcript IDs: ENSMUST00000041618.13, ENSMUST00000227325.2
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGTCAGCTGTCCTGTGAGAGCACCCACAGGCCTTTGTGTTCTCTCTaGTGCAGACACGGTTTCTGCCGCACTGAAGAGCTGATTTATAAA | + |
Preference number: 1 (lower is better) Translates to: GQLSCESTHRPLCSL*CRHGFCRTEELIYK Trigger: TTTATAAATCAGCTCTTCAGTGCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAAAGGCCTGTGGGTGCTCTCACAGGACAGCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 90 bp | TCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTaGAGCAAATCAATTGTGTTTGTACAGGTGCTGCCCCCGGCCTGC | + |
Preference number: 1 (lower is better) Translates to: SLPRLSLPSTSQLPN*SKSIVFVQVLPPAC Trigger: GCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR TCA 90 bp | TGTGTTCTCTCTGCTGCAGACACGGTTTCTGCCGCACTGAAGAGCTaGTTTATAAACAGGAGTATAAAACTGCTCCATTGTAAAGAGGTG | + |
Preference number: 1 (lower is better) Translates to: CVLSAADTVSAALKS*FINRSIKLLHCKEV Trigger: CACCTCTTTACAATGGAGCAGTTTTATACTCCTGTTTATAAATCAGCTCTTCAGTGCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 90 bp | GAGGTGATAAATAGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTaGTACAACAGAAAGGAAGAGATGAGGTCATCGGCTGTAGACATA | + |
Preference number: 1 (lower is better) Translates to: EVINSLKSQLASPTD*YNRKEEMRSSAVDI Trigger: TATGTCTACAGCCGATGACCTCATCTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACTATTTATCACCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 90 bp | AAAGAAGGGGCTTTGCTCTGGACGCCTGTAAGGTTGGCCACAGCTTaGATACAGTCTCTTAGCAAAATAATTATAGTTTACATAGCCATT | + |
Preference number: 1 (lower is better) Translates to: KEGALLWTPVRLATA*IQSLSKIIIVYIAI Trigger: AATGGCTATGTAAACTATAATTATTTTGCTAAGAGACTGTATGCAAGCTGTGGCCAACCTTACAGGCGTCCAGAGCAAAGCCCCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR TCA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGGCCGCACTGAAGAGCTaGTTTATAAACAGGAGTATA | + |
Preference number: 2 (lower is better) Translates to: PPACTPASTADRDPAWSLAALKS*FINRSI Trigger: TATACTCCTGTTTATAAATCAGCTCTTCAGTGCGGC...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 90 bp | AGGATGAGCTCGGGTCAGCTGTCCTGTGAGAGCACCCACAGGCCTTaGTGTTCTCTCTGCTGCAGACACGGTTTCTGCCGCACTGAAGAG | + |
Preference number: 2 (lower is better) Translates to: RMSSGQLSCESTHRP*CSLCCRHGFCRTEE Trigger: CTCTTCAGTGCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAAAGGCCTGTGGGTGCTCTCACAGGACAGCTGACCCGAGCTCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 90 bp | TTCCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTaGTACAGGTGCTGCCCCCGGCCTGCACCCCGGCCTCTACTGCAG | + |
Preference number: 2 (lower is better) Translates to: FLPLHSFQTAANQLC*YRCCPRPAPRPLLQ Trigger: CTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 90 bp | TCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATaGTGTTTGTACAGGTGCTGCCCCCGGCCTGCACCCCGGCCTCTA | + |
Preference number: 2 (lower is better) Translates to: SHFLPLHSFQTAANQ*CLYRCCPRPAPRPL Trigger: TAGAGGCCGGGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR GCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGTTGTGTTCTCTCTGCTaGAGACACGGTTTCTGCCGC | + |
Preference number: 2 (lower is better) Translates to: RDEVIGCRHTPSGSQGELLCSLC*RHGFCR Trigger: GCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAA...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR GCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCTTGTGTTTGTACAGGTaGTGCCCCCGGCCTGCACCC | + |
Preference number: 2 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCLCLYR*CPRPAP Trigger: GGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAA...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR TCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCGGGTCAGCTGTCCTGTaGGAGCACCCACAGGCCTTT | + |
Preference number: 2 (lower is better) Translates to: KRFHQSLNMACLARRPLSGSAVL*EHPQAF Trigger: AAAGGCCTGTGGGTGCTCTCACAGGACAGCTGACCC...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR TCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGGGGTCAGCTGTCCTGTaGGAGCACCCACAGGCCTTT | + |
Preference number: 2 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVGSAVL*EHPQAF Trigger: AAAGGCCTGTGGGTGCTCTCACAGGACAGCTGACCC...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR GCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCTTGTGTTCTCTCTGCTaGAGACACGGTTTCTGCCGC | + |
Preference number: 2 (lower is better) Translates to: SVHTCELKSNMRIHTEKALCSLC*RHGFCR Trigger: GCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAA...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 90 bp | AATTATGTACAATTACTGACAAAATACACCAACCATTTCCAACACTaGATCCACACTGAGAAACAGTCTGTTGTTGATTCTTCTCAACTC | + |
Preference number: 2 (lower is better) Translates to: NYVQLLTKYTNHFQH*IHTEKQSVVDSSQL Trigger: GAGTTGAGAAGAATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTATTTTGTCAGTAATTGTACATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGTCTTTAAATATGGCTaGTTTGGCAAGAAGGCCACT | + |
Preference number: 3 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAVFKYG*FGKKAT Trigger: AGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGAC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGCAATATCCCATTTGCTaGTTACAAAAAGGCGTAATC | + |
Preference number: 3 (lower is better) Translates to: PPACTPASTADRDPAWSLQYPIC*LQKGVI Trigger: GATTACGCCTTTTTGTAACAAGCAAATGGGATATTG...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 72 bp | CAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTaGCCCCGGCCTGCACCCCGGCCTCTACTGCAGACC | + |
Preference number: 3 (lower is better) Translates to: QTAANQLCLYRC*PRPAPRPLLQT Trigger: GGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 72 bp | TCCTGTGAGAGCACCCACAGGCCTTTGTGTTCTCTCTaGTGCAGACACGGTTTCTGCCGCACTGAAGAGCTG | + |
Preference number: 3 (lower is better) Translates to: SCESTHRPLCSL*CRHGFCRTEEL Trigger: CAGCTCTTCAGTGCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAAAGGCCTGTGGGTGCTCTCACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGTCTTTAAATATGGCTaGTTTGGCAAGAAGGCCACT | + |
Preference number: 3 (lower is better) Translates to: ACVPGELRVDGREGTGQGVFKYG*FGKKAT Trigger: AGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGAC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCGACCCTGCTTGGAGCTaGTGTTCCTGGGGAGCTTCG | + |
Preference number: 3 (lower is better) Translates to: SVHTCELKSNMRIHTEKADPAWS*CSWGAS Trigger: CGAAGCTCCCCAGGAACACAAGCTCCAAGCAGGGTC...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATGACCCTGCTTGGAGCTaGTGTTCCTGGGGAGCTTCG | + |
Preference number: 3 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDDPAWS*CSWGAS Trigger: CGAAGCTCCCCAGGAACACAAGCTCCAAGCAGGGTC...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 72 bp | AGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTaGAGCAAATCAATTGTGTTTGTACAGGTGCTGCCC | + |
Preference number: 3 (lower is better) Translates to: RLSLPSTSQLPN*SKSIVFVQVLP Trigger: GGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGTTAAATATGGCTTGTTaGGCAAGAAGGCCACTCAGC | + |
Preference number: 3 (lower is better) Translates to: STSQLPNCSKSIVFVQVLLNMAC*ARRPLS Trigger: GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAA...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR TCA 72 bp | TCTGCTGCAGACACGGTTTCTGCCGCACTGAAGAGCTaGTTTATAAACAGGAGTATAAAACTGCTCCATTGT | + |
Preference number: 3 (lower is better) Translates to: SAADTVSAALKS*FINRSIKLLHC Trigger: ACAATGGAGCAGTTTTATACTCCTGTTTATAAATCAGCTCTTCAGTGCGGCAGAAACCGTGTCTGCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 72 bp | AATAGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTaGTACAACAGAAAGGAAGAGATGAGGTCATCGGCT | + |
Preference number: 3 (lower is better) Translates to: NSLKSQLASPTD*YNRKEEMRSSA Trigger: AGCCGATGACCTCATCTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR-3UTR CAA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCAATATCCCATTTGCTaGTTACAAAAAGGCGTAATC | + |
Preference number: 3 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVQYPIC*LQKGVI Trigger: GATTACGCCTTTTTGTAACAAGCAAATGGGATATTG...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR GCA 72 bp | CAATATCCCATTTGCTTGTTACAAAAAGGCGTAATCTaGAAATATATAAAAACGTCCGCAAGCATCCCATCA | + |
Preference number: 3 (lower is better) Translates to: QYPICLLQKGVI*KYIKTSASIPS Trigger: TGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAACAAGCAAATGGGATATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTCCTGGGCCCGATCGCTaGCAGTGCAGTGAGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAPGPDR*QCSEVG Trigger: GCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGG...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGGGCTTCGGGGGCTGCTaGATCACCTGTGTGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: PPACTPASTADRDPAWSLGFGGC*ITCVGC Trigger: GCAGCCCACACAGGTGATCCAGCAGCCCCCGAAGCC...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGAGCACCTGTGGGGGTTaGAGGACGGGGTGCCATGGT | + |
Preference number: 4 (lower is better) Translates to: PPACTPASTADRDPAWSLSTCGG*RTGCHG Trigger: ACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCT...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGCGACCATGGGTGTCTaGGTCAAGGTCACCTGCGGG | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAATMGV*VKVTCG Trigger: CCCGCAGGTGACCTTGACGCAGACACCCATGGTCGC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTCGTCCACCTCGCTGTTaGAGAAGACCTCGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGARPPRC*RRPRPA Trigger: TGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACG...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTACGCTGCACTGAGCTaGTCAGCACCACAGCCGTCA | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAYAALS*SAPQPS Trigger: TGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTA...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGCCGCAATGCGACCATaGGTGTCTGCGTCAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAAAMRP*VSASRS Trigger: TGACCTTGACGCAGACACCCATGGTCGCATTGCGGC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCATGTTGGTCGGGTTCTaGGGCGGCTGCGGCAGGCGC | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGMLVGF*GGCGRR Trigger: GCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACAT...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGGGACTGGCTGCAGCTaGTTCAGTTGGATCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAGTGCS*FSWICC Trigger: ACAGCAGATCCAACTGAACCAGCTGCAGCCAGTCCC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGAAGCAAGCGGCGCGGTaGGCTGGAGCCCGGGCGCCG | + |
Preference number: 4 (lower is better) Translates to: RDEVIGCRHTPSGSQGELKQAAR*AGARAP Trigger: CGGCGCCCGGGCTCCAGCTCACCGCGCCGCTTGCTT...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGTGGGGTCACCTGCCGTaGAATAATAGGTGTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: PPACTPASTADRDPAWSLWGHLP*NNRCSW Trigger: CCAGGAACACCTATTATTGCACGGCAGGTGACCCCA...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTCAGTTGGATCTGCTGTaGTGTGGTGAGCATGATCCG | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAQLDLL*CGEHDP Trigger: CGGATCATGCTCACCACACCACAGCAGATCCAACTG...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGACCGTCGTCTGGGCCTaGGACACTTGCTTAATTATG | + |
Preference number: 4 (lower is better) Translates to: PPACTPASTADRDPAWSLTVVWA*DTCLIM Trigger: CATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGT...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGCAGCCTTTGCTGTGTaGCATGAGACACGTAACTCA | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAAAFAV*HETRNS Trigger: TGAGTTACGTGTCTCATGCCACACAGCAAAGGCTGC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCTGCTGCTGCTGGCTCTaGTGGATAAAGGCCGCGGAG | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGCCCWL*WIKAAE Trigger: CTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCA...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGGAGATCTGGACAGGTaGAGCACCTGTGGGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGGDLDR*STCGGC Trigger: GCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCCACGAGGACCATTCCTaGGGGCAGCTGGAAGTTCTG | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGHEDHS*GQLEVL Trigger: CAGAACTTCCAGCTGCCCCCAGGAATGGTCCTCGTG...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCGCGCTGGCCGCCAGCTaGGACTCGAGCGAGCCCACC | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCALAAS*DSSEPT Trigger: GGTGGGCTCGCTCGAGTCGCAGCTGGCGGCCAGCGC...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
3UTR CAA 72 bp | TCGGGTCAGCTGTCCTGTGAGAGCACCCACAGGCCTTaGTGTTCTCTCTGCTGCAGACACGGTTTCTGCCGC | + |
Preference number: 4 (lower is better) Translates to: SGQLSCESTHRP*CSLCCRHGFCR Trigger: GCGGCAGAAACCGTGTCTGCAGCAGAGAGAACACAAAGGCCTGTGGGTGCTCTCACAGGACAGCTGACCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGCTAGTGAAATCTTCTaGTTCAATTTTCCCATCCAG | + |
Preference number: 4 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAASEIF*FNFPIQ Trigger: CTGGATGGGAAAATTGAAGCAGAAGATTTCACTAGC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGGCGACCATGGGTGTCTaGGTCAAGGTCACCTGCGGG | + |
Preference number: 4 (lower is better) Translates to: RDEVIGCRHTPSGSQGELATMGV*VKVTCG Trigger: CCCGCAGGTGACCTTGACGCAGACACCCATGGTCGC...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCTTCCAGGTAACACGGTaGGTTTCACCACAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGFQVTR*VSPQGL Trigger: CAGTCCCTGTGGTGAAACCCACCGTGTTACCTGGAA...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGGGATCATTAACAACTaGCCATTCTCACTCCGCACG | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGGIINN*PFSLRT Trigger: CGTGCGGAGTGAGAATGGGCAGTTGTTAATGATCCC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCTGTGCCAGCTCCTGCTaGTGCATCTCTTTTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGCASSC*CISFAF Trigger: GAAAGCAAAAGAGATGCAGCAGCAGGAGCTGGCACA...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGATCACCTGTGTGGGCTaGGTGAGGCTGATGACCGGG | + |
Preference number: 4 (lower is better) Translates to: RDEVIGCRHTPSGSQGELITCVG*VRLMTG Trigger: CCCGGTCATCAGCCTCACGCAGCCCACACAGGTGAT...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCGA | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSGGGPR*PPAATR Trigger: TCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACC...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGGCGCTGGCCGCCAGCTaGGACTCGAGCGAGCCCACC | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVALAAS*DSSEPT Trigger: GGTGGGCTCGCTCGAGTCGCAGCTGGCGGCCAGCGC...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCATGTTGGTCGGGTTCTaGGGCGGCTGCGGCAGGCGC | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSMLVGF*GGCGRR Trigger: GCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACAT...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGTAGTTGGGGTCACCTaGCGTGCAATAATAGGTGTT | + |
Preference number: 4 (lower is better) Translates to: ACVPGELRVDGREGTGQGVVGVT*RAIIGV Trigger: AACACCTATTATTGCACGGCAGGTGACCCCAACTAC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 72 bp | CTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTaGTACAGGTGCTGCCCCCGGCCTGCACCCCGGCCT | + |
Preference number: 4 (lower is better) Translates to: LHSFQTAANQLC*YRCCPRPAPRP Trigger: AGGCCGGGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATAAGCAAGCGGCGCGGTaGGCTGGAGCCCGGGCGCCG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDKQAAR*AGARAP Trigger: CGGCGCCCGGGCTCCAGCTCACCGCGCCGCTTGCTT...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCGGTGCCATGGTACTCTaGGGCTGGGCCTGGGCATGG | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSGAMVL*GWAWAW Trigger: CCATGCCCAGGCCCAGCCTCAGAGTACCATGGCACC...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCGGGGCTGGAGGGCGCTaGTCACCGAGGCAGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSGAGGR*SPRQLS Trigger: AGACAGCTGCCTCGGTGACCAGCGCCCTCCAGCCCC...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGCTGGGTCTTCTTGTCTaGATCGAGACTTCGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: RDEVIGCRHTPSGSQGELLGLLV*IETSLP Trigger: GGGCAGCGAAGTCTCGATCCAGACAAGAAGACCCAG...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCCCACCCAGAACCAGCTaGGGCTGTACCCCGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSPPRTS*GCTPGD Trigger: ATCTCCCGGGGTACAGCCTCAGCTGGTTCTGGGTGG...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGCGGCTCCGGCCGGGCTaGCGCTCACAACATGGTTCC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEERLRPG*RSQHGS Trigger: GGAACCATGTTGTGAGCGGCAGCCCGGCCGGAGCCG...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCAGTGCAGTCGTGGCCTaGGAAGCAGGCGGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSSAVVA*EAGGCC Trigger: GCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACT...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGAGCTGGCCAGCTCCTGCTGCTaGATCTCTTTTGCTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: RDEVIGCRHTPSGSQGELASSCC*ISFAFC Trigger: GCAGAAAGCAAAAGAGATGCAGCAGCAGGAGCTGGC...CAGCTCACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCCCCGATCGCTGCCAGTaGAGTGAGGTTGGCATCTCG | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCPDRCQ*SEVGIS Trigger: CGAGATGCCAACCTCACTGCACTGGCAGCGATCGGG...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGCCGCAATGCGACCATaGGTGTCTGCGTCAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGAAMRP*VSASRS Trigger: TGACCTTGACGCAGACACCCATGGTCGCATTGCGGC...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 72 bp | CTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATaGTGTTTGTACAGGTGCTGCCCCCGGCCTGCACCC | + |
Preference number: 4 (lower is better) Translates to: LPLHSFQTAANQ*CLYRCCPRPAP Trigger: GGGTGCAGGCCGGGGGCAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCAGCACCTGTGGGGGTTaGAGGACGGGGTGCCATGGT | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKASTCGG*RTGCHG Trigger: ACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCT...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGAGTGCAGTCGTGGCCTaGGAAGCAGGCGGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVSAVVA*EAGGCC Trigger: GCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACT...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCGA | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNGGGPR*PPAATR Trigger: TCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACC...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCAGCATGATCCGGTTGTaGGGCTGCCGCAATGCGACC | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSSMIRL*GCRNAT Trigger: GGTCGCATTGCGGCAGCCTCACAACCGGATCATGCT...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATCTCCCATTCAAAGTTTaGGCGGCGCCGGGGCCGGGC | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDLPFKV*AAPGPG Trigger: GCCCGGCCCCGGCGCCGCGCAAACTTTGAATGGGAG...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCCTGGGCATGGGCCTaGATCTGGGCCAGGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNAWAWA*IWARAC Trigger: GCAGGCCCTGGCCCAGATGCAGGCCCATGCCCAGGC...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCGCCTGGGCATGGGCCTaGATCTGGGCCAGGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIAWAWA*IWARAC Trigger: GCAGGCCCTGGCCCAGATGCAGGCCCATGCCCAGGC...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCTCGTTGTCGCATCTGTaGCAGCTCCTGCTGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCSLSHL*QLLLLH Trigger: ATGCAGCAGCAGGAGCTGGCACAGATGCGACAACGA...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCTGCCGCTCACAACATaGTTCCCGAGCGCGCCGGCG | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETLPLTT*FPSAPA Trigger: CGCCGGCGCGCTCGGGAACCATGTTGTGAGCGGCAG...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATCTGCCGCTCACAACATaGTTCCCGAGCGCGCCGGCG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDLPLTT*FPSAPA Trigger: CGCCGGCGCGCTCGGGAACCATGTTGTGAGCGGCAG...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCGGAGATCTGGACAGGTaGAGCACCTGTGGGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKAGDLDR*STCGGC Trigger: GCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCC...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCCTGGAGCCTGCACAGTaGAGATCTGGACAGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSLEPAQ*RSGQVE Trigger: CTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAG...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATGGGGCTGGAGGGCGCTaGTCACCGAGGCAGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDGAGGR*SPRQLS Trigger: AGACAGCTGCCTCGGTGACCAGCGCCCTCCAGCCCC...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATGGTGCCATGGTACTCTaGGGCTGGGCCTGGGCATGG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDGAMVL*GWAWAW Trigger: CCATGCCCAGGCCCAGCCTCAGAGTACCATGGCACC...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGAGCATGATCCGGTTGTaGGGCTGCCGCAATGCGACC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEESMIRL*GCRNAT Trigger: GGTCGCATTGCGGCAGCCTCACAACCGGATCATGCT...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACCGGCTCCGGCCGGGCTaGCGCTCACAACATGGTTCC | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNRLRPG*RSQHGS Trigger: GGAACCATGTTGTGAGCGGCAGCCCGGCCGGAGCCG...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGAAGCAGGCGGCTGCTaGTGCTGGCTCTGCTGGATA | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEEAGGC*CWLCWI Trigger: TATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGGTGAGGCTGCCGCAATaGGACCATGGGTGTCTGCGT | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVVRLPQ*DHGCLR Trigger: ACGCAGACACCCATGGTCGCATTGCGGCAGCCTCAC...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGGTGAGGCTGCCGCAATaGGACCATGGGTGTCTGCGT | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLVRLPQ*DHGCLR Trigger: ACGCAGACACCCATGGTCGCATTGCGGCAGCCTCAC...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTTGGTTCAGTTGGATCTaGTGTGGTGTGGTGAGCATG | + |
Preference number: 4 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGWFSWI*CGVVSM Trigger: CATGCTCACCACACCACAGCAGATCCAACTGAACCA...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCGGCAGCAGCTGCTTGTaGAGATACAGTAGACAGGGC | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSGSSCL*RYSRQG Trigger: GCCCTGTCTACTGTATCTGCACAAGCAGCTGCTGCC...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCTCGTTGTCGCATCTGTaGCAGCTCCTGCTGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSSLSHL*QLLLLH Trigger: ATGCAGCAGCAGGAGCTGGCACAGATGCGACAACGA...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCCCGATCGCTGCCAGTaGAGTGAGGTTGGCATCTCG | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVPDRCQ*SEVGIS Trigger: CGAGATGCCAACCTCACTGCACTGGCAGCGATCGGG...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATCCTGGGCCCGATCGCTaGCAGTGCAGTGAGGTTGGC | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDPGPDR*QCSEVG Trigger: GCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGG...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR CCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCTGGAGCCTGCACAGTaGAGATCTGGACAGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSLEPAQ*RSGQVE Trigger: CTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAG...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCTGCTGCTGGCTCTGCTaGATAAAGGCCGCGGAGTCT | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKACCWLC*IKAAES Trigger: AGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCA...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR CCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCTGCAGCTGGTTCAGTTaGATCTGCTGTGGTGTGGTG | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCCSWFS*ICCGVV Trigger: CACCACACCACAGCAGATCCAACTGAACCAGCTGCA...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR TCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGCGTCCACCTCGCTGTTaGAGAAGACCTCGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLRPPRC*RRPRPA Trigger: TGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACG...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR TCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGTGGGCCAGGGCCTGCTaGGGGATCATTAACAACTGC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEWARAC*GIINNC Trigger: GCAGTTGTTAATGATCCCTCAGCAGGCCCTGGCCCA...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGTTCACTCCAGCCATTaGCGCAACATCATTGATGTC | + |
Preference number: 4 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGVHSSH*RNIIDV Trigger: GACATCAATGATGTTGCGTCAATGGCTGGAGTGAAC...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
||
CDS-3UTR GCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCCAGGCTTCGGGGGCTaGTGGATCACCAGTGGTGTG | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETPGFGG*WITSGV Trigger: CACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGG...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS-3UTR CCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGGGAAGTTCTGGATGTTaGTCGGGTTCTGCGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVGSSGC*SGSAAA Trigger: AGCCGCCGCAGAACCCGACCAACATCCAGAACTTCC...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCTGCACAGTGGAGATCTaGACAGGTGGAGCACCTGTG | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKACTVEI*TGGAPV Trigger: CACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCA...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGCTGCTGGCTCTGCTaGATAAAGGCCGCGGAGTCT | + |
Preference number: 4 (lower is better) Translates to: LPLHSFQTAANQLCLYRCCCWLC*IKAAES Trigger: AGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCA...GCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCTGCTGGATCACCAGTaGTGTGGGCGGCGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETLLDHQ*CGRRLL Trigger: AAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAG...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS-3UTR CCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCCTTTCCTCTTTTTCCTaGGCCCGATCGCTGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKALSSFS*ARSLPV Trigger: CACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAG...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCCCACCCAGAACCAGCTaGGGCTGTACCCCGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIPPRTS*GCTPGD Trigger: ATCTCCCGGGGTACAGCCTCAGCTGGTTCTGGGTGG...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCAAGGTAAGGCTGAGGTaGAGAGTTCAGTTCTCGGTA | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCKVRLR*RVQFSV Trigger: TACCGAGAACTGAACTCTTCACCTCAGCCTTACCTT...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGCGGACATCACTCGCTTaGTCGTATCTGTCGTCGTCC | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLRTSLA*SYLSSS Trigger: GGACGACGACAGATACGAGCAAGCGAGTGATGTCCG...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCGCCAGCTCCTGCTGCTaGATCTCTTTTGCTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: SVHTCELKSNMRIHTEKAASSCC*ISFAFC Trigger: GCAGAAAGCAAAAGAGATGCAGCAGCAGGAGCTGGC...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGACCCGCGTGATTCTTTaGCGTGTGAACTGTCTGGGG | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVTRVIL*RVNCLG Trigger: CCCCAGACAGTTCACACGGCAAAGAATCACGCGGGT...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGGGCAGCTGGAAGTTCTaGATGTTGGTCGGGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVGSWKF*MLVGFC Trigger: GCAGAACCCGACCAACATCCAGAACTTCCAGCTGCC...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGTGCACAGTGGAGATCTaGACAGGTGGAGCACCTGTG | + |
Preference number: 4 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVCTVEI*TGGAPV Trigger: CACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCA...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGGGACTGGCTGCAGCTaGTTCAGTTGGATCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEGTGCS*FSWICC Trigger: ACAGCAGATCCAACTGAACCAGCTGCAGCCAGTCCC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGCTGGGTCTTCTTGTCTaGATCGAGACTTCGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEELGLLV*IETSLP Trigger: GGGCAGCGAAGTCTCGATCCAGACAAGAAGACCCAG...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCACCGTCGTCTGGGCCTaGGACACTTGCTTAATTATG | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSTVVWA*DTCLIM Trigger: CATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGT...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCTTGACGCAACATCATTaGTGTCATCATCATCCCGGA | + |
Preference number: 4 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCLTQHH*CHHHPG Trigger: TCCGGGATGATGATGACATCAATGATGTTGCGTCAA...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACTGCTGCTGCTGGCTCTaGTGGATAAAGGCCGCGGAG | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNCCCWL*WIKAAE Trigger: CTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCA...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGAAGCAGGCGGCTGCTaGTGCTGGCTCTGCTGGATA | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNEAGGC*CWLCWI Trigger: TATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTC...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTTGCTTCAACCTTAATTaGTCTGGGTCTTCTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGCFNLN*SGSSCL Trigger: CAGACAAGAAGACCCAGAGCAATTAAGGTTGAAGCA...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGATTCCTGGGGGCAGCTaGAAGTTCTGGATGTTGGTC | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLIPGGS*KFWMLV Trigger: GACCAACATCCAGAACTTCCAGCTGCCCCCAGGAAT...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGATTCCTGGGGGCAGCTaGAAGTTCTGGATGTTGGTC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEIPGGS*KFWMLV Trigger: GACCAACATCCAGAACTTCCAGCTGCCCCCAGGAAT...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATCACGAGGACCATTCCTaGGGGCAGCTGGAAGTTCTG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDHEDHS*GQLEVL Trigger: CAGAACTTCCAGCTGCCCCCAGGAATGGTCCTCGTG...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCCAGTTGGATCTGCTGTaGTGTGGTGAGCATGATCCG | + |
Preference number: 4 (lower is better) Translates to: LPLHSFQTAANQLCLYRCQLDLL*CGEHDP Trigger: CGGATCATGCTCACCACACCACAGCAGATCCAACTG...GCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGCAGCTGGTTCAGTTaGATCTGCTGTGGTGTGGTG | + |
Preference number: 4 (lower is better) Translates to: LPLHSFQTAANQLCLYRCCSWFS*ICCGVV Trigger: CACCACACCACAGCAGATCCAACTGAACCAGCTGCA...GCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGTTCCAGGTAACACGGTaGGTTTCACCACAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEFQVTR*VSPQGL Trigger: CAGTCCCTGTGGTGAAACCCACCGTGTTACCTGGAA...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCAAGGTAAGGCTGAGGTaGAGAGTTCAGTTCTCGGTA | + |
Preference number: 4 (lower is better) Translates to: KRFHQSLNMACLARRPLSKVRLR*RVQFSV Trigger: TACCGAGAACTGAACTCTTCACCTCAGCCTTACCTT...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACTACGCTGCACTGAGCTaGTCAGCACCACAGCCGTCA | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNYAALS*SAPQPS Trigger: TGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTA...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGGGCAGCAGCTGCTTGTaGAGATACAGTAGACAGGGC | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETGSSCL*RYSRQG Trigger: GCCCTGTCTACTGTATCTGCACAAGCAGCTGCTGCC...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATACCCGCGTGATTCTTTaGCGTGTGAACTGTCTGGGG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDTRVIL*RVNCLG Trigger: CCCCAGACAGTTCACACGGCAAAGAATCACGCGGGT...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 72 bp | TACAAAGAAGGGGCTTTGCTCTGGACGCCTGTAAGGTaGGCCACAGCTTGCATACAGTCTCTTAGCAAAATA | + |
Preference number: 4 (lower is better) Translates to: YKEGALLWTPVR*ATACIQSLSKI Trigger: TATTTTGCTAAGAGACTGTATGCAAGCTGTGGCCAACCTTACAGGCGTCCAGAGCAAAGCCCCTTCTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGTTGTTCAAAGAATTTaGGCTGAGCCCGGACATCAC | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEVVQRI*AEPGHH Trigger: GTGATGTCCGGGCTCAGCTCAAATTCTTTGAACAAC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGGTTGTTCAAAGAATTTaGGCTGAGCCCGGACATCAC | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLVVQRI*AEPGHH Trigger: GTGATGTCCGGGCTCAGCTCAAATTCTTTGAACAAC...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGTTTGTAGAGCAACAGTaGATGGCTTGTCTCACGCTC | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLFVEQQ*MACLTL Trigger: GAGCGTGAGACAAGCCATTCACTGTTGCTCTACAAA...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGTGGGGTCACCTGCCGTaGAATAATAGGTGTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETWGHLP*NNRCSW Trigger: CCAGGAACACCTATTATTGCACGGCAGGTGACCCCA...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCCGGACATCACTCGCTTaGTCGTATCTGTCGTCGTCC | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIRTSLA*SYLSSS Trigger: GGACGACGACAGATACGAGCAAGCGAGTGATGTCCG...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCGGCAGCTGGAAGTTCTaGATGTTGGTCGGGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIGSWKF*MLVGFC Trigger: GCAGAACCCGACCAACATCCAGAACTTCCAGCTGCC...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATCTGTCTGAACAGCTGTaGCTGTTCCAAGTGAGGCTG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDLSEQL*LFQVRL Trigger: CAGCCTCACTTGGAACAGCCACAGCTGTTCAGACAG...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACCTTTCCTCTTTTTCCTaGGCCCGATCGCTGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNLSSFS*ARSLPV Trigger: CACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAG...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGTTGACGCAACATCATTaGTGTCATCATCATCCCGGA | + |
Preference number: 4 (lower is better) Translates to: STSQLPNCSKSIVFVQVLLTQHH*CHHHPG Trigger: TCCGGGATGATGATGACATCAATGATGTTGCGTCAA...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATGGGATCATTAACAACTaGCCATTCTCACTCCGCACG | + |
Preference number: 4 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDGIINN*PFSLRT Trigger: CGTGCGGAGTGAGAATGGGCAGTTGTTAATGATCCC...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAAT | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEELNYGS*GHLPCN Trigger: ATTGCACGGCAGGTGACCCCAACTACCATAATTAAG...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACCTGTCTGAACAGCTGTaGCTGTTCCAAGTGAGGCTG | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNLSEQL*LFQVRL Trigger: CAGCCTCACTTGGAACAGCCACAGCTGTTCAGACAG...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCGAGAAGTTTTTCTGCTaGGCCGTTTCAGATATTTTT | + |
Preference number: 4 (lower is better) Translates to: SVFKYGLFGKKATQPRMSEKFFC*AVSDIF Trigger: AAAAATATCTGAAACGGCTCAGCAGAAAAACTTCTC...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGTTTGTAGAGCAACAGTaGATGGCTTGTCTCACGCTC | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETFVEQQ*MACLTL Trigger: GAGCGTGAGACAAGCCATTCACTGTTGCTCTACAAA...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | CTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGTGGCCAATATCCTTaGACTTTCTTCAGACAGGTT | + |
Preference number: 4 (lower is better) Translates to: LPLHSFQTAANQLCLYRCCGQYP*TFFRQV Trigger: AACCTGTCTGAAGAAAGTGCAAGGATATTGGCCACA...GCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCAGCCTTTGCTGTGTaGCATGAGACACGTAACTCA | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNAAFAV*HETRNS Trigger: TGAGTTACGTGTCTCATGCCACACAGCAAAGGCTGC...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 72 bp | AAAAATACTGATCAGCGTTCAGTTCACACGTGCGAATaGAAGTCTAACATGAGAATCCACACGGAGAAAGCC | + |
Preference number: 4 (lower is better) Translates to: KNTDQRSVHTCE*KSNMRIHTEKA Trigger: GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGAACGCTGATCAGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCGTTCACTCCAGCCATTaGCGCAACATCATTGATGTC | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIVHSSH*RNIIDV Trigger: GACATCAATGATGTTGCGTCAATGGCTGGAGTGAAC...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCGTAGTTGGGGTCACCTaGCGTGCAATAATAGGTGTT | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPIVVGVT*RAIIGV Trigger: AACACCTATTATTGCACGGCAGGTGACCCCAACTAC...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CCA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAAT | + |
Preference number: 4 (lower is better) Translates to: KGVICKYIKTSASIPSETLNYGS*GHLPCN Trigger: ATTGCACGGCAGGTGACCCCAACTACCATAATTAAG...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR TCA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGAGAAGTTTTTCTGCTaGGCCGTTTCAGATATTTTT | + |
Preference number: 4 (lower is better) Translates to: SLKSQLASPTDCYNRKEEEKFFC*AVSDIF Trigger: AAAAATATCTGAAACGGCTCAGCAGAAAAACTTCTC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCTGTGGCCAATATCCTTaGACTTTCTTCAGACAGGTT | + |
Preference number: 4 (lower is better) Translates to: VTKRRNLQIYKNVRKHPICGQYP*TFFRQV Trigger: AACCTGTCTGAAGAAAGTGCAAGGATATTGGCCACA...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACTGCTTCAACCTTAATTaGTCTGGGTCTTCTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNCFNLN*SGSSCL Trigger: CAGACAAGAAGACCCAGAGCAATTAAGGTTGAAGCA...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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3UTR CAA 72 bp | CAATTACTGACAAAATACACCAACCATTTCCAACACTaGATCCACACTGAGAAACAGTCTGTTGTTGATTCT | + |
Preference number: 4 (lower is better) Translates to: QLLTKYTNHFQH*IHTEKQSVVDS Trigger: AGAATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTATTTTGTCAGTAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | GCCGCGGCCCGCAGCTCGGGCGTGCGCGGCGCGAGGTGGTGGTGGTaGGCCGCGCTGGCCGCCAGCTGCGACTCGAGCGAGCCCACCAGA | + |
Preference number: 5 (lower is better) Translates to: AAARSSGVRGARWWW*AALAASCDSSEPTR Trigger: TCTGGTGGGCTCGCTCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGCCCGAGCTGCGGGCCGCGGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | GGCGGCGCGGGCCCGTTGTTGACCGGGCTGACAGCAGGTGCGGCGTaGGGCGCGGTGGGCGGCGCGGCGCTCCCATTCAAAGTTTGCGCG | + |
Preference number: 5 (lower is better) Translates to: GGAGPLLTGLTAGAA*GAVGGAALPFKVCA Trigger: CGCGCAAACTTTGAATGGGAGCGCCGCGCCGCCCACCGCGCCGCACGCCGCACCTGCTGTCAGCCCGGTCAACAACGGGCCCGCGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | GCAGCTCGGGCGTGCGCGGCGCGAGGTGGTGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCGAGCGAGCCCACCAGATCGCTCACCA | + |
Preference number: 5 (lower is better) Translates to: AARACAARGGGGGPR*PPAATRASPPDRSP Trigger: TGGTGAGCGATCTGGTGGGCTCGCTCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGCCCGAGCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | GGGGGCAGCTGGAAGTTCTGGATGTTGGTCGGGTTCTGCGGCGGCTaGGGCAGGCGCGGGGCCAGCACGGTGGGCGTCAGCGTGGCCCGG | + |
Preference number: 5 (lower is better) Translates to: GGSWKFWMLVGFCGG*GRRGASTVGVSVAR Trigger: CCGGGCCACGCTGACGCCCACCGTGCTGGCCCCGCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTGCTCCCATTCAAAGTTaGCGCGGCGCCGGGGCCGGG | + |
Preference number: 5 (lower is better) Translates to: CPRPAPRPLLQTGTLLGAAPIQS*RGAGAG Trigger: CCCGGCCCCGGCGCCGCGCAAACTTTGAATGGGAGC...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | TCCGCACGAGGACCATTCCTGGGGGCAGCTGGAAGTTCTGGATGTTaGTCGGGTTCTGCGGCGGCTGCGGCAGGCGCGGGGCCAGCACGG | + |
Preference number: 5 (lower is better) Translates to: SARGPFLGAAGSSGC*SGSAAAAAGAGPAR Trigger: CCGTGCTGGCCCCGCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCCAGGAATGGTCCTCGTGCGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | GTCACCTGCGGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTGCTaGATCACCAGTGGTGTGGGCGGCGCCTGCTTGCCAACGCCAACC | + |
Preference number: 5 (lower is better) Translates to: VTCGGRIKAPGFGGC*ITSGVGGACLPTPT Trigger: GGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCCGCAGGTGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS GCA 90 bp | AAGGTCACCTGCGGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTaGTGGATCACCAGTGGTGTGGGCGGCGCCTGCTTGCCAACGCCA | + |
Preference number: 5 (lower is better) Translates to: KVTCGGRIKAPGFGG*WITSGVGGACLPTP Trigger: TGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCCGCAGGTGACCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 90 bp | GGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTGCTGGATCACCAGTaGTGTGGGCGGCGCCTGCTTGCCAACGCCAACCTGTGTGGGCTG | + |
Preference number: 5 (lower is better) Translates to: GPDQGSRLRGLLDHQ*CGRRLLANANLCGL Trigger: CAGCCCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS GCA 90 bp | CCAGGCTTCGGGGGCTGCTGGATCACCAGTGGTGTGGGCGGCGCCTaGTTGCCAACGCCAACCTGTGTGGGCTGCGTGAGGCTGATGACC | + |
Preference number: 5 (lower is better) Translates to: PGFGGCWITSGVGGA*LPTPTCVGCVRLMT Trigger: GGTCATCAGCCTCACGCAGCCCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 90 bp | CCAACGCCAACCTGTGTGGGCTGCGTGAGGCTGATGACCGGGGGCTaGAGGGCGCTGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGC | + |
Preference number: 5 (lower is better) Translates to: PTPTCVGCVRLMTGG*RALVTEAAVFPAVR Trigger: GCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCAGCGCCCTCCAGCCCCCGGTCATCAGCCTCACGCAGCCCACACAGGTTGGCGTTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS GCA 90 bp | ACCACAGCCGTCAGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTGCTaGTGCTGGCTCTGCTGGATAAAGGCCGCGGAGTCTGGGGTCAGC | + |
Preference number: 5 (lower is better) Translates to: TTAVSAVVACEAGGC*CWLCWIKAAESGVS Trigger: GCTGACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACTGACGGCTGTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | AGCACCACAGCCGTCAGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTaGTGCTGCTGGCTCTGCTGGATAAAGGCCGCGGAGTCTGGGGTC | + |
Preference number: 5 (lower is better) Translates to: STTAVSAVVACEAGG*CCWLCWIKAAESGV Trigger: GACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACTGACGGCTGTGGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | TCTGGACAGGTGGAGCACCTGTGGGGGTTGCAGGACGGGGTGCCATaGTACTCTGAGGCTGGGCCTGGGCATGGGCCTGCATCTGGGCCA | + |
Preference number: 5 (lower is better) Translates to: SGQVEHLWGLQDGVP*YSEAGPGHGPASGP Trigger: TGGCCCAGATGCAGGCCCATGCCCAGGCCCAGCCTCAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | GCCGTCAGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTGCTGCTGCTaGCTCTGCTGGATAAAGGCCGCGGAGTCTGGGGTCAGCTGTCTC | + |
Preference number: 5 (lower is better) Translates to: AVSAVVACEAGGCCC*LCWIKAAESGVSCL Trigger: GAGACAGCTGACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACTGACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | TGCTGGATCACCTGTGTGGGCTGCGTGAGGCTGATGACCGGGGGCTaGAGGGCGCTGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGC | + |
Preference number: 5 (lower is better) Translates to: CWITCVGCVRLMTGG*RALVTEAAVFPAVR Trigger: GCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCAGCGCCCTCCAGCCCCCGGTCATCAGCCTCACGCAGCCCACACAGGTGATCCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TGCCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTCGTCCACCTCGCTGTaGAAGAAGACCTCGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: CPRPAPRPLLQTGTLLGASSTSL*KKTSSS Trigger: GCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGA...AGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | GGCGCTGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGCTGCACTaGGCTGCTCAGCACCACAGCCGTCAGTGCAGTCGTGGCCTGCGA | + |
Preference number: 5 (lower is better) Translates to: GAGHRGSCLPSCTLH*AAQHHSRQCSRGLR Trigger: TCGCAGGCCACGACTGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCAGCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | TGGAGGGCGCTGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGCTaGACTGAGCTGCTCAGCACCACAGCCGTCAGTGCAGTCGTGGCC | + |
Preference number: 5 (lower is better) Translates to: WRALVTEAAVFPAVR*TELLSTTAVSAVVA Trigger: GGCCACGACTGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCAGCGCCCTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | GCAGTCGTGGCCTGCGAAGCAGGCGGCTGCTGCTGCTGGCTCTGCTaGATAAAGGCCGCGGAGTCTGGGGTCAGCTGTCTCAAGGCAGGT | + |
Preference number: 5 (lower is better) Translates to: AVVACEAGGCCCWLC*IKAAESGVSCLKAG Trigger: ACCTGCCTTGAGACAGCTGACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | CCCCCGGCCTGCACCCCGGCCTCTACTGCAGACCGGGACCCTGCTTGGAGCTTGCTGGGCAGCAGCTGCTaGTGCAGATACAGTAGACAG | + |
Preference number: 5 (lower is better) Translates to: PPACTPASTADRDPAWSLLGSSC*CRYSRQ Trigger: CTGTCTACTGTATCTGCACAAGCAGCTGCTGCCCAG...CAAGCTCCAAGCAGGGTCCCGGTCTGCAGTAGAGGCCGGGGTGCAGGCCGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | AGCCTGCACAGTGGAGATCTGGACAGGTGGAGCACCTGTGGGGGTTaGAGGACGGGGTGCCATGGTACTCTGAGGCTGGGCCTGGGCATG | + |
Preference number: 5 (lower is better) Translates to: SLHSGDLDRWSTCGG*RTGCHGTLRLGLGM Trigger: CATGCCCAGGCCCAGCCTCAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | AGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTGCTGCTGCTGGCTCTaGTGGATAAAGGCCGCGGAGTCTGGGGTCAGCTGTCTCAAGGCA | + |
Preference number: 5 (lower is better) Translates to: SAVVACEAGGCCCWL*WIKAAESGVSCLKA Trigger: TGCCTTGAGACAGCTGACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | TGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGCTGCACTGAGCTaGTCAGCACCACAGCCGTCAGTGCAGTCGTGGCCTGCGAAGCAG | + |
Preference number: 5 (lower is better) Translates to: WSPRQLSSQLYAALS*SAPQPSVQSWPAKQ Trigger: CTGCTTCGCAGGCCACGACTGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | CTGCTGTGGTGTGGTGAGCATGATCCGGTTGTGAGGCTGCCGCAATaGGACCATGGGTGTCTGCGTCAAGGTCACCTGCGGGGGCCGGAT | + |
Preference number: 5 (lower is better) Translates to: LLWCGEHDPVVRLPQ*DHGCLRQGHLRGPD Trigger: ATCCGGCCCCCGCAGGTGACCTTGACGCAGACACCCATGGTCGCATTGCGGCAGCCTCACAACCGGATCATGCTCACCACACCACAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | GCTGTTCCAAGTGAGGCTGGCTGTGCGGAGCCACCCAGAACCAGCTaGGGCTGTACCCCGGGAGATCGCTGTAGGGTTGTAGTGGGCTGT | + |
Preference number: 5 (lower is better) Translates to: AVPSEAGCAEPPRTS*GCTPGDRCRVVVGC Trigger: ACAGCCCACTACAACCCTACAGCGATCTCCCGGGGTACAGCCTCAGCTGGTTCTGGGTGGCTCCGCACAGCCAGCCTCACTTGGAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTGGCGGCGCGGGCCCGTaGTTGACCGGGCTGACAGCA | + |
Preference number: 5 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGGGAGP*LTGLTA Trigger: TGCTGTCAGCCCGGTCAACAACGGGCCCGCGCCGCC...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGCCAGTGCAGTGAGGTaGGCATCTCGTTGTCGCATC | + |
Preference number: 5 (lower is better) Translates to: ACVPGELRVDGREGTGQGASAVR*ASRCRI Trigger: GATGCGACAACGAGATGCCAACCTCACTGCACTGGC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCGACCCGCGTGATTCTTaGCCGTGTGAACTGTCTGGG | + |
Preference number: 5 (lower is better) Translates to: ACVPGELRVDGREGTGQGDPRDS*PCELSG Trigger: CCCAGACAGTTCACACGGCAAAGAATCACGCGGGTC...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | TGCCGTGCAATAATAGGTGTTCCTGGAGCCTGCACAGTGGAGATCTaGACAGGTGGAGCACCTGTGGGGGTTGCAGGACGGGGTGCCATG | + |
Preference number: 5 (lower is better) Translates to: CRAIIGVPGACTVEI*TGGAPVGVAGRGAM Trigger: CATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAGGAACACCTATTATTGCACGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCCCCGGCTCCTTGAGTTaGTTTTTCTGGGCAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: ACVPGELRVDGREGTGQGPGSLS*FFWAAA Trigger: AGCTGCTGCCCAGAAAAACAAACTCAAGGAGCCGGG...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCATGAGGTCCCTGAGGTaGACCCGCGTGATTCTTTGC | + |
Preference number: 5 (lower is better) Translates to: ACVPGELRVDGREGTGQGMRSLR*TRVILC Trigger: GCAAAGAATCACGCGGGTCAACCTCAGGGACCTCAT...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | TGTTCGTTGAGGTGTCCCTGTCTGAACAGCTGTGGCTGTTCCAAGTaGGGCTGGCTGTGCGGAGCCACCCAGAACCAGCTGAGGCTGTAC | + |
Preference number: 5 (lower is better) Translates to: CSLRCPCLNSCGCSK*GWLCGATQNQLRLY Trigger: GTACAGCCTCAGCTGGTTCTGGGTGGCTCCGCACAGCCAGCCTCACTTGGAACAGCCACAGCTGTTCAGACAGGGACACCTCAACGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | TGGCCCAGTGCAGTCCACTTTCCTCTTTTTCCTGGGCCCGATCGCTaGCAGTGCAGTGAGGTTGGCATCTCGTTGTCGCATCTGTGCCAG | + |
Preference number: 5 (lower is better) Translates to: WPSAVHFPLFPGPDR*QCSEVGISLSHLCQ Trigger: CTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTGGACTGCACTGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | TGGTTCAGTTGGATCTGCTGTGGTGTGGTGAGCATGATCCGGTTGTaGGGCTGCCGCAATGCGACCATGGGTGTCTGCGTCAAGGTCACC | + |
Preference number: 5 (lower is better) Translates to: WFSWICCGVVSMIRL*GCRNATMGVCVKVT Trigger: GGTGACCTTGACGCAGACACCCATGGTCGCATTGCGGCAGCCTCACAACCGGATCATGCTCACCACACCACAGCAGATCCAACTGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | AGTCCACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCCAGTGCAGTaGGGTTGGCATCTCGTTGTCGCATCTGTGCCAGCTCCTGCTGCT | + |
Preference number: 5 (lower is better) Translates to: SPLSSFSWARSLPVQ*GWHLVVASVPAPAA Trigger: AGCAGCAGGAGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | AGTGCAGTCCACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCCAGTaGAGTGAGGTTGGCATCTCGTTGTCGCATCTGTGCCAGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: SAVHFPLFPGPDRCQ*SEVGISLSHLCQLL Trigger: CAGGAGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTGGACTGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | TCTAAACAAAATATGAGGTCCCTGAGGTTGACCCGCGTGATTCTTTaGCGTGTGAACTGTCTGGGGGTTCCCACGCCGGAGCCGCCTGGG | + |
Preference number: 5 (lower is better) Translates to: SKQNMRSLRLTRVIL*RVNCLGVPTPEPPG Trigger: CCCAGGCGGCTCCGGCGTGGGAACCCCCAGACAGTTCACACGGCAAAGAATCACGCGGGTCAACCTCAGGGACCTCATATTTTGTTTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | AATAATAGGTGTTCCTGGAGCCTGCACAGTGGAGATCTGGACAGGTaGAGCACCTGTGGGGGTTGCAGGACGGGGTGCCATGGTACTCTG | + |
Preference number: 5 (lower is better) Translates to: NNRCSWSLHSGDLDR*STCGGCRTGCHGTL Trigger: CAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAGGAACACCTATTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | TTTCACCACAGGGACTGGCTGCAGCTGGTTCAGTTGGATCTGCTGTaGTGTGGTGAGCATGATCCGGTTGTGAGGCTGCCGCAATGCGAC | + |
Preference number: 5 (lower is better) Translates to: FHHRDWLQLVQLDLL*CGEHDPVVRLPQCD Trigger: GTCGCATTGCGGCAGCCTCACAACCGGATCATGCTCACCACACCACAGCAGATCCAACTGAACCAGCTGCAGCCAGTCCCTGTGGTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCGGCGGCGCGGGCCCGTaGTTGACCGGGCTGACAGCA | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSGGAGP*LTGLTA Trigger: TGCTGTCAGCCCGGTCAACAACGGGCCCGCGCCGCC...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCGGCGCGGGCCCGTTGTaGACCGGGCTGACAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: SVHTCELKSNMRIHTEKAGAGPL*TGLTAG Trigger: ACCTGCTGTCAGCCCGGTCAACAACGGGCCCGCGCC...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | GGAGATCGCTGTAGGGTTGTAGTGGGCTGTACCGTCGTCTGGGCCTaGGACACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTGCA | + |
Preference number: 5 (lower is better) Translates to: GDRCRVVVGCTVVWA*DTCLIMVVGVTCRA Trigger: TGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGTACAGCCCACTACAACCCTACAGCGATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GCTTGTGTTCCTGGGGAGCTTCGTGTAGACGGGAGGGAAGGGACAGGACAGGGCTTGTGGCCAATATCCTaGCACTTTCTTCAGACAGGT | + |
Preference number: 5 (lower is better) Translates to: ACVPGELRVDGREGTGQGLWPIS*HFLQTG Trigger: ACCTGTCTGAAGAAAGTGCAAGGATATTGGCCACAA...GCCCTGTCCTGTCCCTTCCCTCCCGTCTACACGAAGCTCCCCAGGAACACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | AGTTCCGTGATGCCGTGCTTTTTACCTATCTCCAGTATCCTCCTCTaGAAAGGCGCGGGGAGGAGGAAGGTGTCGTCTTTACAGGATCGG | + |
Preference number: 5 (lower is better) Translates to: SSVMPCFLPISSILL*KGAGRRKVSSLQDR Trigger: CCGATCCTGTAAAGACGACACCTTCCTCCTCCCCGCGCCTTTGCAGAGGAGGATACTGGAGATAGGTAAAAAGCACGGCATCACGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCTGGAAGTTCTGGATGTaGGTCGGGTTCTGCGGCGGC | + |
Preference number: 5 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCWKFWM*VGFCGG Trigger: GCCGCCGCAGAACCCGACCAACATCCAGAACTTCCA...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 90 bp | CTGTACCGTCGTCTGGGCCTGAGACACTTGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAATAATAGGTGTTCCTGGAGCCTGCAC | + |
Preference number: 5 (lower is better) Translates to: LYRRLGLRHLLNYGS*GHLPCNNRCSWSLH Trigger: GTGCAGGCTCCAGGAACACCTATTATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGTACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TACACCAACCATTTCCAACACTTGATCCACACTGAGAAACAGTCTGTTGTTGATGCTCCCATTCAAAGTTaGCGCGGCGCCGGGGCCGGG | + |
Preference number: 5 (lower is better) Translates to: YTNHFQHLIHTEKQSVVDAPIQS*RGAGAG Trigger: CCCGGCCCCGGCGCCGCGCAAACTTTGAATGGGAGC...ATCAACAACAGACTGTTTCTCAGTGTGGATCAAGTGTTGGAAATGGTTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCCCGGACATCACTCGCTaGCTCGTATCTGTCGTCGTC | + |
Preference number: 5 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCPDITR*LVSVVV Trigger: GACGACGACAGATACGAGCAAGCGAGTGATGTCCGG...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 90 bp | GGCCTGAGACACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTaGAATAATAGGTGTTCCTGGAGCCTGCACAGTGGAGATCTGGAC | + |
Preference number: 5 (lower is better) Translates to: GLRHLLNYGSWGHLP*NNRCSWSLHSGDLD Trigger: GTCCAGATCTCCACTGTGCAGGCTCCAGGAACACCTATTATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAGGAAGAGATGAGGTCATCGGCTGTAGACATACACCTAGCGGGAGTCAGGGTACAGTAGACAGGGCTTaGGTTCCAGGTAACACGGTG | + |
Preference number: 5 (lower is better) Translates to: KGRDEVIGCRHTPSGSQGTVDRA*VPGNTV Trigger: CACCGTGTTACCTGGAACCAAAGCCCTGTCTACTGT...ACCCTGACTCCCGCTAGGTGTATGTCTACAGCCGATGACCTCATCTCTTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGTGGAAGTTCTGGATGTaGGTCGGGTTCTGCGGCGGC | + |
Preference number: 5 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVWKFWM*VGFCGG Trigger: GCCGCCGCAGAACCCGACCAACATCCAGAACTTCCA...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCGACCCGCGTGATTCTTaGCCGTGTGAACTGTCTGGG | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSDPRDS*PCELSG Trigger: CCCAGACAGTTCACACGGCAAAGAATCACGCGGGTC...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCGAGGATGAGCATGAGGTCCCTGAGGTaGACCCGCGTGATTCTTTGC | + |
Preference number: 5 (lower is better) Translates to: SVFKYGLFGKKATQPRMSMRSLR*TRVILC Trigger: GCAAAGAATCACGCGGGTCAACCTCAGGGACCTCAT...GCTCATCCTCGGCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGTCGTCCACCTCGCTGTaGAAGAAGACCTCGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: STSQLPNCSKSIVFVQVLSSTSL*KKTSSS Trigger: GCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGA...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCCTGGGCAGCAGCTGCTaGTGCAGATACAGTAGACAG | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSLGSSC*CRYSRQ Trigger: CTGTCTACTGTATCTGCACAAGCAGCTGCTGCCCAG...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGCCAGTGCAGTGAGGTaGGCATCTCGTTGTCGCATC | + |
Preference number: 5 (lower is better) Translates to: SLKSQLASPTDCYNRKEEASAVR*ASRCRI Trigger: GATGCGACAACGAGATGCCAACCTCACTGCACTGGC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | GTGTGGCATGAGACACGTAACTCACTACATCTGGATGCAGTTCCGTaGTGCCGTGCTTTTTACCTATCTCCAGTATCCTCCTCTGCAAAG | + |
Preference number: 5 (lower is better) Translates to: VWHETRNSLHLDAVP*CRAFYLSPVSSSAK Trigger: CTTTGCAGAGGAGGATACTGGAGATAGGTAAAAAGCACGGCATCACGGAACTGCATCCAGATGTAGTGAGTTACGTGTCTCATGCCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TCAGTTCACACGTGCGAATTGAAGTCTAACATGAGAATCCACACGGAGAAAGCCTTGCTCTGGGTCTTCTaGTCTGGATCGAGACTTCGC | + |
Preference number: 5 (lower is better) Translates to: SVHTCELKSNMRIHTEKALLWVF*SGSRLR Trigger: GCGAAGTCTCGATCCAGACAAGAAGACCCAGAGCAA...GGCTTTCTCCGTGTGGATTCTCATGTTAGACTTCAATTCGCACGTGTGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCTTGCTCTGGGTCTTCTaGTCTGGATCGAGACTTCGC | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSLLWVF*SGSRLR Trigger: GCGAAGTCTCGATCCAGACAAGAAGACCCAGAGCAA...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AGGTTCTCACTTCCTAGGCTCTCACTTCCTTCCACTTCACAGCTTCCAAACTGCGCAACAGTGAATGGCTaGTCTCACGCTCGTTTTCTA | + |
Preference number: 5 (lower is better) Translates to: RFSLPRLSLPSTSQLPNCATVNG*SHARFL Trigger: TAGAAAACGAGCGTGAGACAAGCCATTCACTGTTGC...GCAGTTTGGAAGCTGTGAAGTGGAAGGAAGTGAGAGCCTAGGAAGTGAGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 90 bp | CATCTTTCCTCTGCTTTTCAATCTGATCCAGTTGTTCAAAGAATTTaGGCTGAGCCCGGACATCACTCGCTTGCTCGTATCTGTCGTCGT | + |
Preference number: 5 (lower is better) Translates to: HLSSAFQSDPVVQRI*AEPGHHSLARICRR Trigger: ACGACGACAGATACGAGCAAGCGAGTGATGTCCGGGCTCAGCTCAAATTCTTTGAACAACTGGATCAGATTGAAAAGCAGAGGAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACCCGGACATCACTCGCTaGCTCGTATCTGTCGTCGTC | + |
Preference number: 5 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNPDITR*LVSVVV Trigger: GACGACGACAGATACGAGCAAGCGAGTGATGTCCGG...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACCCCGGCTCCTTGAGTTaGTTTTTCTGGGCAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNPGSLS*FFWAAA Trigger: AGCTGCTGCCCAGAAAAACAAACTCAAGGAGCCGGG...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCATTGACGCAACATCATaGATGTCATCATCATCCCGG | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSIDATS*MSSSSR Trigger: CCGGGATGATGATGACATCAATGATGTTGCGTCAAT...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | TCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGCTGGCAACAGTGAATGGCTaGTCTCACGCTCGTTTTCTA | + |
Preference number: 5 (lower is better) Translates to: STSQLPNCSKSIVFVQVLATVNG*SHARFL Trigger: TAGAAAACGAGCGTGAGACAAGCCATTCACTGTTGC...CAGCACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | GTTACAAAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCACAGTAGACAGGGCTTaGGTTCCAGGTAACACGGTG | + |
Preference number: 5 (lower is better) Translates to: VTKRRNLQIYKNVRKHPITVDRA*VPGNTV Trigger: CACCGTGTTACCTGGAACCAAAGCCCTGTCTACTGT...GATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTTTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | CCTTCCACTTCACAGCTTCCAAACTGCAGCAAATCAATTGTGTTTGTACAGGTGTTGTGGCCAATATCCTaGCACTTTCTTCAGACAGGT | + |
Preference number: 5 (lower is better) Translates to: PSTSQLPNCSKSIVFVQVLWPIS*HFLQTG Trigger: ACCTGTCTGAAGAAAGTGCAAGGATATTGGCCACAA...CACCTGTACAAACACAATTGATTTGCTGCAGTTTGGAAGCTGTGAAGTGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AGTCTAAAAAGTCAGCTTGCTTCGCCAACTGACTGCTACAACAGAAAGGAAGAGGCTGCTGCATCTCTTTaGCTTTCTGCTTCAACCTTA | + |
Preference number: 5 (lower is better) Translates to: SLKSQLASPTDCYNRKEEAAASL*LSASTL Trigger: TAAGGTTGAAGCAGAAAGCAAAAGAGATGCAGCAGC...CTCTTCCTTTCTGTTGTAGCAGTCAGTTGGCGAAGCAAGCTGACTTTTTAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAGCGCTTCCATCAGTCTTTAAATATGGCTTGTTTGGCAAGAAGGCCACTCAGCTTCAATCTGATCCAGTaGTTCAAAGAATTTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: KRFHQSLNMACLARRPLSFNLIQ*FKEFEL Trigger: CAGCTCAAATTCTTTGAACAACTGGATCAGATTGAA...GCTGAGTGGCCTTCTTGCCAAACAAGCCATATTTAAAGACTGATGGAAGCGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACATTGACGCAACATCATaGATGTCATCATCATCCCGG | + |
Preference number: 5 (lower is better) Translates to: KRRNLQIYKNVRKHPIRNIDATS*MSSSSR Trigger: CCGGGATGATGATGACATCAATGATGTTGCGTCAAT...GTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS-3UTR CAA 90 bp | AAAGGCGTAATCTGCAAATATATAAAAACGTCCGCAAGCATCCCATCAGAAACGTTCAATCTGATCCAGTaGTTCAAAGAATTTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: KGVICKYIKTSASIPSETFNLIQ*FKEFEL Trigger: CAGCTCAAATTCTTTGAACAACTGGATCAGATTGAA...CGTTTCTGATGGGATGCTTGCGGACGTTTTTATATATTTGCAGATTACGCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | GCCTGGATGACAGAGCCGGCGGCGGGCGGCGGCGCGGGCCCGTTGTaGACCGGGCTGACAGCAGGTGCGGCGTGCGGCGCGGTGGGCGGC | + |
Preference number: 6 (lower is better) Translates to: AWMTEPAAGGGAGPL*TGLTAGAACGAVGG Trigger: GCCGCCCACCGCGCCGCACGCCGCACCTGCTGTCAGCCCGGTCAACAACGGGCCCGCGCCGCCGCCCGCCGCCGGCTCTGTCATCCAGGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | GCCGCCTGGATGACAGAGCCGGCGGCGGGCGGCGGCGCGGGCCCGTaGTTGACCGGGCTGACAGCAGGTGCGGCGTGCGGCGCGGTGGGC | + |
Preference number: 6 (lower is better) Translates to: AAWMTEPAAGGGAGP*LTGLTAGAACGAVG Trigger: GCCCACCGCGCCGCACGCCGCACCTGCTGTCAGCCCGGTCAACAACGGGCCCGCGCCGCCGCCCGCCGCCGGCTCTGTCATCCAGGCGGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | CGCAGCTCGGGCGTGCGCGGCGCGAGGTGGTGGTGGTaGGCCGCGCTGGCCGCCAGCTGCGACTCGAGCGAG | + |
Preference number: 6 (lower is better) Translates to: RSSGVRGARWWW*AALAASCDSSE Trigger: CTCGCTCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGCCCGAGCTGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | GCGTGCGCGGCGCGAGGTGGTGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCGAGCGAGCCCACCAGAT | + |
Preference number: 6 (lower is better) Translates to: ACAARGGGGGPR*PPAATRASPPD Trigger: ATCTGGTGGGCTCGCTCGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | GGCCCGTTGTTGACCGGGCTGACAGCAGGTGCGGCGTaGGGCGCGGTGGGCGGCGCGGCGCTCCCATTCAAA | + |
Preference number: 6 (lower is better) Translates to: GPLLTGLTAGAA*GAVGGAALPFK Trigger: TTTGAATGGGAGCGCCGCGCCGCCCACCGCGCCGCACGCCGCACCTGCTGTCAGCCCGGTCAACAACGGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | TGCGGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTaGTGGATCACCAGTGGTGTGGGCGGCGCCTGCTTG | + |
Preference number: 6 (lower is better) Translates to: CGGRIKAPGFGG*WITSGVGGACL Trigger: CAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCCGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 72 bp | GGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTGCTaGATCACCAGTGGTGTGGGCGGCGCCTGCTTGCCA | + |
Preference number: 6 (lower is better) Translates to: GGRIKAPGFGGC*ITSGVGGACLP Trigger: TGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CAA 90 bp | CTCCGCACGAGGACCATTCCTGGGGGCAGCTGGAAGTTCTGGATGTaGGTCGGGTTCTGCGGCGGCTGCGGCAGGCGCGGGGCCAGCACG | + |
Preference number: 6 (lower is better) Translates to: LRTRTIPGGSWKFWM*VGFCGGCGRRGAST Trigger: CGTGCTGGCCCCGCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCCAGGAATGGTCCTCGTGCGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | GGCTTCGGGGGCTGCTGGATCACCAGTGGTGTGGGCGGCGCCTGCTaGCCAACGCCAACCTGTGTGGGCTGCGTGAGGCTGATGACCGGG | + |
Preference number: 6 (lower is better) Translates to: GFGGCWITSGVGGAC*PTPTCVGCVRLMTG Trigger: CCCGGTCATCAGCCTCACGCAGCCCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS GCA 72 bp | GGGGGCTGCTGGATCACCAGTGGTGTGGGCGGCGCCTaGTTGCCAACGCCAACCTGTGTGGGCTGCGTGAGG | + |
Preference number: 6 (lower is better) Translates to: GGCWITSGVGGA*LPTPTCVGCVR Trigger: CCTCACGCAGCCCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 72 bp | GGACCATTCCTGGGGGCAGCTGGAAGTTCTGGATGTTaGTCGGGTTCTGCGGCGGCTGCGGCAGGCGCGGGG | + |
Preference number: 6 (lower is better) Translates to: GPFLGAAGSSGC*SGSAAAAAGAG Trigger: CCCCGCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCCAGGAATGGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | GACAGGTGGAGCACCTGTGGGGGTTGCAGGACGGGGTaGCATGGTACTCTGAGGCTGGGCCTGGGCATGGGC | + |
Preference number: 6 (lower is better) Translates to: DRWSTCGGCRTG*HGTLRLGLGMG Trigger: GCCCATGCCCAGGCCCAGCCTCAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | GCCGTCAGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTaGTGCTGCTGGCTCTGCTGGATAAAGGCCGCGGAG | + |
Preference number: 6 (lower is better) Translates to: AVSAVVACEAGG*CCWLCWIKAAE Trigger: CTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACTGACGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | TGCGGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTaGTGGATCACCTGTGTGGGCTGCGTGAGGCTGATG | + |
Preference number: 6 (lower is better) Translates to: CGGRIKAPGFGG*WITCVGCVRLM Trigger: CATCAGCCTCACGCAGCCCACACAGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCCGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227325.2 |
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CDS CCA 72 bp | ACCTGTGTGGGCTGCGTGAGGCTGATGACCGGGGGCTaGAGGGCGCTGGTCACCGAGGCAGCTGTCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: TCVGCVRLMTGG*RALVTEAAVFP Trigger: TGGGAAGACAGCTGCCTCGGTGACCAGCGCCCTCCAGCCCCCGGTCATCAGCCTCACGCAGCCCACACAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | CTCCAGGCTTCGGGGGCTGCTGGATCACCAGTGGTGTaGGCGGCGCCTGCTTGCCAACGCCAACCTGTGTGG | + |
Preference number: 6 (lower is better) Translates to: LQASGAAGSPVV*AAPACQRQPVW Trigger: CCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 72 bp | CAAGGCTCCAGGCTTCGGGGGCTGCTGGATCACCAGTaGTGTGGGCGGCGCCTGCTTGCCAACGCCAACCTG | + |
Preference number: 6 (lower is better) Translates to: QGSRLRGLLDHQ*CGRRLLANANL Trigger: CAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS CCA 72 bp | GGGGGCCGGATCAAGGCTCCAGGCTTCGGGGGCTGCTaGATCACCTGTGTGGGCTGCGTGAGGCTGATGACC | + |
Preference number: 6 (lower is better) Translates to: GGRIKAPGFGGC*ITCVGCVRLMT Trigger: GGTCATCAGCCTCACGCAGCCCACACAGGTGATCCAGCAGCCCCCGAAGCCTGGAGCCTTGATCCGGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227325.2 |
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CDS CAA 72 bp | AGGACCATTCCTGGGGGCAGCTGGAAGTTCTGGATGTaGGTCGGGTTCTGCGGCGGCTGCGGCAGGCGCGGG | + |
Preference number: 6 (lower is better) Translates to: RTIPGGSWKFWM*VGFCGGCGRRG Trigger: CCCGCGCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCCAGGAATGGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | GGCTGCTGGATCACCAGTGGTGTGGGCGGCGCCTGCTaGCCAACGCCAACCTGTGTGGGCTGCGTGAGGCTG | + |
Preference number: 6 (lower is better) Translates to: GCWITSGVGGAC*PTPTCVGCVRL Trigger: CAGCCTCACGCAGCCCACACAGGTTGGCGTTGGCAAGCAGGCGCCGCCCACACCACTGGTGATCCAGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041618.13 |
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CDS GCA 72 bp | GTGGCCTGCGAAGCAGGCGGCTGCTGCTGCTGGCTCTaGTGGATAAAGGCCGCGGAGTCTGGGGTCAGCTGT | + |
Preference number: 6 (lower is better) Translates to: VACEAGGCCCWL*WIKAAESGVSC Trigger: ACAGCTGACCCCAGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | CGCACGAGGACCATTCCTGGGGGCAGCTGGAAGTTCTaGATGTTGGTCGGGTTCTGCGGCGGCTGCGGCAGG | + |
Preference number: 6 (lower is better) Translates to: RTRTIPGGSWKF*MLVGFCGGCGR Trigger: CCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTGCCCCCAGGAATGGTCCTCGTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | GTCAGTGCAGTCGTGGCCTGCGAAGCAGGCGGCTGCTaGTGCTGGCTCTGCTGGATAAAGGCCGCGGAGTCT | + |
Preference number: 6 (lower is better) Translates to: VSAVVACEAGGC*CWLCWIKAAES Trigger: AGACTCCGCGGCCTTTATCCAGCAGAGCCAGCAGCAGCAGCCGCCTGCTTCGCAGGCCACGACTGCACTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | GAGCCTGCACAGTGGAGATCTGGACAGGTGGAGCACCTGTGGGGGTaGCAGGACGGGGTGCCATGGTACTCTGAGGCTGGGCCTGGGCAT | + |
Preference number: 6 (lower is better) Translates to: EPAQWRSGQVEHLWG*QDGVPWYSEAGPGH Trigger: ATGCCCAGGCCCAGCCTCAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | CAGTGGAGATCTGGACAGGTGGAGCACCTGTGGGGGTaGCAGGACGGGGTGCCATGGTACTCTGAGGCTGGG | + |
Preference number: 6 (lower is better) Translates to: QWRSGQVEHLWG*QDGVPWYSEAG Trigger: CCCAGCCTCAGAGTACCATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | CACCGAGGCAGCTGTCTTCCCAGCTGTACGCTGCACTaGGCTGCTCAGCACCACAGCCGTCAGTGCAGTCGT | + |
Preference number: 6 (lower is better) Translates to: HRGSCLPSCTLH*AAQHHSRQCSR Trigger: ACGACTGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCTCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | AGGCAGCTGTCTTCCCAGCTGTACGCTGCACTGAGCTaGTCAGCACCACAGCCGTCAGTGCAGTCGTGGCCT | + |
Preference number: 6 (lower is better) Translates to: RQLSSQLYAALS*SAPQPSVQSWP Trigger: AGGCCACGACTGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | CTGGTCACCGAGGCAGCTGTCTTCCCAGCTGTACGCTaGACTGAGCTGCTCAGCACCACAGCCGTCAGTGCA | + |
Preference number: 6 (lower is better) Translates to: LVTEAAVFPAVR*TELLSTTAVSA Trigger: TGCACTGACGGCTGTGGTGCTGAGCAGCTCAGTGCAGCGTACAGCTGGGAAGACAGCTGCCTCGGTGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | TGTTCCTGGAGCCTGCACAGTGGAGATCTGGACAGGTaGAGCACCTGTGGGGGTTGCAGGACGGGGTGCCAT | + |
Preference number: 6 (lower is better) Translates to: CSWSLHSGDLDR*STCGGCRTGCH Trigger: ATGGCACCCCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAGGAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | CCAGATCGCTCACCACTTTCTCGTCCACCTCGCTGTTaGAGAAGACCTCGTCCAGCAGATCCGAGCCCGCCG | + |
Preference number: 6 (lower is better) Translates to: PDRSPLSRPPRC*RRPRPADPSPP Trigger: CGGCGGGCTCGGATCTGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGAGAAAGTGGTGAGCGATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | AGGTGTCCCTGTCTGAACAGCTGTGGCTGTTCCAAGTaGGGCTGGCTGTGCGGAGCCACCCAGAACCAGCTG | + |
Preference number: 6 (lower is better) Translates to: RCPCLNSCGCSK*GWLCGATQNQL Trigger: CAGCTGGTTCTGGGTGGCTCCGCACAGCCAGCCTCACTTGGAACAGCCACAGCTGTTCAGACAGGGACACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | CCCGATCGCTGCCAGTGCAGTGAGGTTGGCATCTCGTaGTCGCATCTGTGCCAGCTCCTGCTGCTGCATCTC | + |
Preference number: 6 (lower is better) Translates to: PDRCQCSEVGIS*SHLCQLLLLHL Trigger: GAGATGCAGCAGCAGGAGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | TGGATCTGCTGTGGTGTGGTGAGCATGATCCGGTTGTaGGGCTGCCGCAATGCGACCATGGGTGTCTGCGTC | + |
Preference number: 6 (lower is better) Translates to: WICCGVVSMIRL*GCRNATMGVCV Trigger: GACGCAGACACCCATGGTCGCATTGCGGCAGCCTCACAACCGGATCATGCTCACCACACCACAGCAGATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | AGGGACTGGCTGCAGCTGGTTCAGTTGGATCTGCTGTaGTGTGGTGAGCATGATCCGGTTGTGAGGCTGCCG | + |
Preference number: 6 (lower is better) Translates to: RDWLQLVQLDLL*CGEHDPVVRLP Trigger: CGGCAGCCTCACAACCGGATCATGCTCACCACACCACAGCAGATCCAACTGAACCAGCTGCAGCCAGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | AGCTGTAGAGGTGGTGCTGGCCCCAGGGACTGTTCGTaGAGGTGTCCCTGTCTGAACAGCTGTGGCTGTTCC | + |
Preference number: 6 (lower is better) Translates to: SCRGGAGPRDCS*RCPCLNSCGCS Trigger: GGAACAGCCACAGCTGTTCAGACAGGGACACCTCAACGAACAGTCCCTGGGGCCAGCACCACCTCTACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | TTTTTCCTGGGCCCGATCGCTGCCAGTGCAGTGAGGTaGGCATCTCGTTGTCGCATCTGTGCCAGCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: FFLGPIAASAVR*ASRCRICASSC Trigger: GCAGGAGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | ACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCCAGTGCAGTGAGGTaGGCATCTCGTTGTCGCATCTGTGCCAGCTCCTGCTGCTGCATC | + |
Preference number: 6 (lower is better) Translates to: TFLFFLGPIAASAVR*ASRCRICASSCCCI Trigger: GATGCAGCAGCAGGAGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | TCCTCTTTTTCCTGGGCCCGATCGCTGCCAGTGCAGTaGGGTTGGCATCTCGTTGTCGCATCTGTGCCAGCT | + |
Preference number: 6 (lower is better) Translates to: SSFSWARSLPVQ*GWHLVVASVPA Trigger: AGCTGGCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | AATATGAGGTCCCTGAGGTTGACCCGCGTGATTCTTTaGCGTGTGAACTGTCTGGGGGTTCCCACGCCGGAG | + |
Preference number: 6 (lower is better) Translates to: NMRSLRLTRVIL*RVNCLGVPTPE Trigger: CTCCGGCGTGGGAACCCCCAGACAGTTCACACGGCAAAGAATCACGCGGGTCAACCTCAGGGACCTCATATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | ATAATAGGTGTTCCTGGAGCCTGCACAGTGGAGATCTaGACAGGTGGAGCACCTGTGGGGGTTGCAGGACGG | + |
Preference number: 6 (lower is better) Translates to: IIGVPGACTVEI*TGGAPVGVAGR Trigger: CCGTCCTGCAACCCCCACAGGTGCTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAGGAACACCTATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | CACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCCAGTaGAGTGAGGTTGGCATCTCGTTGTCGCATCTGTGC | + |
Preference number: 6 (lower is better) Translates to: HFPLFPGPDRCQ*SEVGISLSHLC Trigger: GCACAGATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | GCAGTCCACTTTCCTCTTTTTCCTGGGCCCGATCGCTaGCAGTGCAGTGAGGTTGGCATCTCGTTGTCGCAT | + |
Preference number: 6 (lower is better) Translates to: AVHFPLFPGPDR*QCSEVGISLSH Trigger: ATGCGACAACGAGATGCCAACCTCACTGCACTGGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTGGACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | AGTTGGGGTCACCTGCCGTGCAATAATAGGTGTTCCTaGAGCCTGCACAGTGGAGATCTGGACAGGTGGAGC | + |
Preference number: 6 (lower is better) Translates to: SWGHLPCNNRCS*SLHSGDLDRWS Trigger: GCTCCACCTGTCCAGATCTCCACTGTGCAGGCTCCAGGAACACCTATTATTGCACGGCAGGTGACCCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | TGTAGTGGGCTGTACCGTCGTCTGGGCCTGAGACACTaGCTTAATTATGGTAGTTGGGGTCACCTGCCGTGC | + |
Preference number: 6 (lower is better) Translates to: CSGLYRRLGLRH*LNYGSWGHLPC Trigger: GCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGTACAGCCCACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | GCAGCAGCTGCTTGTGCAGATACAGTAGACAGGGCTTaGGTTCCAGGTAACACGGTGGGTTTCACCACAGGG | + |
Preference number: 6 (lower is better) Translates to: AAAACADTVDRA*VPGNTVGFTTG Trigger: CCCTGTGGTGAAACCCACCGTGTTACCTGGAACCAAAGCCCTGTCTACTGTATCTGCACAAGCAGCTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | TTTTTCTGGGCAGCAGCTGCTTGTGCAGATACAGTAGACAGGGCTTaGGTTCCAGGTAACACGGTGGGTTTCACCACAGGGACTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: FFWAAAACADTVDRA*VPGNTVGFTTGTGC Trigger: GCAGCCAGTCCCTGTGGTGAAACCCACCGTGTTACCTGGAACCAAAGCCCTGTCTACTGTATCTGCACAAGCAGCTGCTGCCCAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | TGTAGGGTTGTAGTGGGCTGTACCGTCGTCTGGGCCTaGGACACTTGCTTAATTATGGTAGTTGGGGTCACC | + |
Preference number: 6 (lower is better) Translates to: CRVVVGCTVVWA*DTCLIMVVGVT Trigger: GGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACGACGGTACAGCCCACTACAACCCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | ATGCCGTGCTTTTTACCTATCTCCAGTATCCTCCTCTaGAAAGGCGCGGGGAGGAGGAAGGTGTCGTCTTTA | + |
Preference number: 6 (lower is better) Translates to: MPCFLPISSILL*KGAGRRKVSSL Trigger: TAAAGACGACACCTTCCTCCTCCCCGCGCCTTTGCAGAGGAGGATACTGGAGATAGGTAAAAAGCACGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CCA 72 bp | CGTCTGGGCCTGAGACACTTGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAATAATAGGTGTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: RLGLRHLLNYGS*GHLPCNNRCSW Trigger: CCAGGAACACCTATTATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS GCA 72 bp | CACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTaGAATAATAGGTGTTCCTGGAGCCTGCACAGTGGA | + |
Preference number: 6 (lower is better) Translates to: HLLNYGSWGHLP*NNRCSWSLHSG Trigger: TCCACTGTGCAGGCTCCAGGAACACCTATTATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | GAGACACGTAACTCACTACATCTGGATGCAGTTCCGTaGTGCCGTGCTTTTTACCTATCTCCAGTATCCTCC | + |
Preference number: 6 (lower is better) Translates to: ETRNSLHLDAVP*CRAFYLSPVSS Trigger: GGAGGATACTGGAGATAGGTAAAAAGCACGGCATCACGGAACTGCATCCAGATGTAGTGAGTTACGTGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 90 bp | ATCCAGTTGTTCAAAGAATTTGAGCTGAGCCCGGACATCACTCGCTaGCTCGTATCTGTCGTCGTCCTTATAAGAGAAGTTTTTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: IQLFKEFELSPDITR*LVSVVVLIREVFLL Trigger: CAGCAGAAAAACTTCTCTTATAAGGACGACGACAGATACGAGCAAGCGAGTGATGTCCGGGCTCAGCTCAAATTCTTTGAACAACTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS TCA 72 bp | TCTGCTTTTCAATCTGATCCAGTTGTTCAAAGAATTTaGGCTGAGCCCGGACATCACTCGCTTGCTCGTATC | + |
Preference number: 6 (lower is better) Translates to: SAFQSDPVVQRI*AEPGHHSLARI Trigger: GATACGAGCAAGCGAGTGATGTCCGGGCTCAGCTCAAATTCTTTGAACAACTGGATCAGATTGAAAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |
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CDS CAA 72 bp | TTCAAAGAATTTGAGCTGAGCCCGGACATCACTCGCTaGCTCGTATCTGTCGTCGTCCTTATAAGAGAAGTT | + |
Preference number: 6 (lower is better) Translates to: FKEFELSPDITR*LVSVVVLIREV Trigger: AACTTCTCTTATAAGGACGACGACAGATACGAGCAAGCGAGTGATGTCCGGGCTCAGCTCAAATTCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041618.13 ENSMUST00000227325.2 |