Pregenerated sensors for TAF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025782Ensembl transcript IDs: ENSMUST00000026888.11, ENSMUST00000114906.2, ENSMUST00000114907.2, ENSMUST00000114909.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATaGCAGAACCAGCCCAGCCCCGACCCGGCGCAGGGCAGCAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: PLGCAASPQGPGETG*QNQPSPDPAQGSSP Trigger: AGGACTGCTGCCCTGCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | GTTTCCTTCCGGTTGCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTaGGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VSFRLRGPPRPLRGR*AWAGSWLWVLVSLL Trigger: AAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAAGGAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CCA 90 bp | TTCCGGTTGCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGCGCTTaGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: FRLRGPPRPLRGRCA*AGSWLWVLVSLLCL Trigger: TAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | TCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTaGAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SRGVPCSCPCSSGMR*KSTGPGGDRMAEPA Trigger: GGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CCA 90 bp | AGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTaGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: RGSIQRGAMFLSLLL*DALQVHRARGRQDG Trigger: GCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | GAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATaGGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: EHPEGCHVLVLAPLG*AASPQGPGETGWQN Trigger: GTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | GCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATaGTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGAGCATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: ASPRASPPLEFSSAT*CGSSGPCVSEGASR Trigger: TCTGGATGCTCCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CCA 90 bp | CCCCGCCCATTGCGTGGGCGGTGCGCTTGGGCAGGGTCATGGCTCTaGGTCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACA | + |
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Preference number: 1 (lower is better) Translates to: PRPLRGRCAWAGSWL*VLVSLLCLCTAAIT Trigger: TGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | GCGGGAGCTCAGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTaGCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: AGAQAHVFQREHPEG*HVLVLAPLGCAASP Trigger: TGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCTGAGCTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR GCA 90 bp | TTACCTCCCCGTGGAGGGAGTGGGCTTGCCAACTGTAGCTACCGATaGGCCCTTCCATCAGTCAAGGCATTTGGACATTACCTTCTTATC | + |
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Preference number: 1 (lower is better) Translates to: LPPRGGSGLANCSYR*ALPSVKAFGHYLLI Trigger: GATAAGAAGGTAATGTCCAAATGCCTTGACTGATGGAAGGGCGCATCGGTAGCTACAGTTGGCAAGCCCACTCCCTCCACGGGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR TCA 90 bp | TCACAAAAATATTCCCAGTGCTGTGACTGGAGCGTTCTTTCCTTCTaGTTACCTCCCCGTGGAGGGAGTGGGCTTGCCAACTGTAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: SQKYSQCCDWSVLSF*LPPRGGSGLANCSY Trigger: GTAGCTACAGTTGGCAAGCCCACTCCCTCCACGGGGAGGTAATCAGAAGGAAAGAACGCTCCAGTCACAGCACTGGGAATATTTTTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR TCA 90 bp | TCACACAGTGGGATGGGAATGCAACCAAGGTATAAAATAGGCCAATaGAGACAATCTGCACAGGGGTGGACAGGACATGATAGAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: SHSGMGMQPRYKIGQ*RQSAQGWTGHDRNP Trigger: AGGGTTTCTATCATGTCCTGTCCACCCCTGTGCAGATTGTCTTCATTGGCCTATTTTATACCTTGGTTGCATTCCCATCCCACTGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CCA 90 bp | TCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGACATaGCTGAAATCGCAGTGGATTCCAGAGAAAGCCAGAATTAAACAC | + |
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Preference number: 1 (lower is better) Translates to: SSSLFFAYAQQQLQT*LKSQWIPEKARIKH Trigger: GTGTTTAATTCTGGCTTTCTCTGGAATCCACTGCGATTTCAGCCATGTCTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR TCA 90 bp | CGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGACATGGCTaGAATCGCAGTGGATTCCAGAGAAAGCCAGAATTAAACACGATA | + |
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Preference number: 1 (lower is better) Translates to: RLSSLPMHSSNYRHG*NRSGFQRKPELNTI Trigger: TATCGTGTTTAATTCTGGCTTTCTCTGGAATCCACTGCGATTTCAGCCATGTCTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CAA 90 bp | CTTCCGGTTGCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGCGCTaGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPVAGSSPPIAWAVR*GRVMALGPRLSSLP Trigger: AGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCCTCTGGGATGCGCTaGAAGTCCACAGGGCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SPRASPPLEFSSATCCGSSSGMR*KSTGPG Trigger: CCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGA...GCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACCCGGGGGAGACAGGATaGCAGAACCAGCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNPGETG*QNQPSP Trigger: GGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGG...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCCGGGGGAGACAGGATaGCAGAACCAGCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: WRCQPSGQPSTGVFFSNMPGETG*QNQPSP Trigger: GGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGG...CATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGCTTGCTCCTCTGGGATaGGCTGCAAGTCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VTGNRQMEVPALGPALHWLAPLG*AASPQG Trigger: GCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAG...CCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCCCGGGGGAGACAGGATaGCAGAACCAGCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QREHPEGCHVLVLAPLGCPGETG*QNQPSP Trigger: GGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGG...GCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTTGCTCCTCTGGGATaGGCTGCAAGTCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QPSGQPSTGVFFSNMLRELAPLG*AASPQG Trigger: GCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAG...CTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCATAGGCAGATGGAGGTaGCAGCCCTCGGGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: CAWAGSWLWVLVSLLCLCIGRWR*QPSGQP Trigger: GGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTAT...GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CAA 90 bp | AGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTaGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: RPMCFRGSIQRGAMF*SLLLWDALQVHRAR Trigger: CCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCTTGCTCCTCTGGGATaGGCTGCAAGTCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGQPSTGVFFSNMLRELRLAPLG*AASPQG Trigger: GCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAG...CCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CAA 90 bp | ATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTaGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: MCFRGSIQRGAMFLS*LLWDALQVHRARGR Trigger: TCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTCTTCAGCAACATGCTaGGGGAGCTCAGGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: TGNRQMEVPALGPALHWSSSATC*GSSGPC Trigger: ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGA...ACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CAA 90 bp | TTTCAAACCATCAACTTGAGATGTCAATTGCCTGTTTCCTTCCGGTaGCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGCGCTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FQTINLRCQLPVSFR*RGPPRPLRGRCAWA Trigger: TGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGGCAATTGACATCTCAAGTTGATGGTTTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTGAGATGTCAATTGCCTGTTTCCTTCCGGTTGCGGGGTCCTCCCCGCCCAGGGCCAGCCCTCCACTaGAGTTTTCTTCAGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: NLRCQLPVSFRLRGPPRPGPALH*SFLQQH Trigger: ATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCC...TGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGGCAATTGACATCTCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCATCAGTCAAGGCATTTaGACATTACCTTCTTATCTA | + |
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Preference number: 2 (lower is better) Translates to: CAWAGSWLWVLVSLLCLCISQGI*TLPSYL Trigger: TAGATAAGAAGGTAATGTCCAAATGCCTTGACTGAT...GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CAA 90 bp | TTGCCAACTGTAGCTACCGATGCGCCCTTCCATCAGTCAAGGCATTaGGACATTACCTTCTTATCTAATACCATGACGAAAGGTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LPTVATDAPFHQSRH*DITFLSNTMTKGSG Trigger: TCCAGAACCTTTCGTCATGGTATTAGATAAGAAGGTAATGTCCAAATGCCTTGACTGATGGAAGGGCGCATCGGTAGCTACAGTTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR CCA 72 bp | CGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGCGCTTaGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RGPPRPLRGRCA*AGSWLWVLVSL Trigger: AAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | GAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATaGGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: EGCHVLVLAPLG*AASPQGPGETG Trigger: TCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CCA 72 bp | CGCCCATTGCGTGGGCGGTGCGCTTGGGCAGGGTCATaGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGC | + |
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Preference number: 3 (lower is better) Translates to: RPLRGRCAWAGS*LWVLVSLLCLC Trigger: GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | GTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTaGAAGTCCACAGGGCCCGGGGGAGACAGGATGGCA | + |
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Preference number: 3 (lower is better) Translates to: VPCSCPCSSGMR*KSTGPGGDRMA Trigger: TGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CCA 72 bp | ATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTaGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: IQRGAMFLSLLL*DALQVHRARGR Trigger: TCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR CCA 72 bp | CAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTaGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QMEVPALGPALH*SFLQQHAAGAQ Trigger: CTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR-3UTR CAA 90 bp | TGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCGCCATGTTCTTGTCCTaGCTCCTCTGGGATGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: CAWAGSWLWVLVSLLCLCAMFLS*LLWDAL Trigger: CAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGC...GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | CAGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTaGCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCT | + |
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Preference number: 3 (lower is better) Translates to: QAHVFQREHPEG*HVLVLAPLGCA Trigger: AGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| 3UTR TCA 72 bp | TATTCCCAGTGCTGTGACTGGAGCGTTCTTTCCTTCTaGTTACCTCCCCGTGGAGGGAGTGGGCTTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: YSQCCDWSVLSF*LPPRGGSGLAN Trigger: GTTGGCAAGCCCACTCCCTCCACGGGGAGGTAATCAGAAGGAAAGAACGCTCCAGTCACAGCACTGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | CGTGGAGGGAGTGGGCTTGCCAACTGTAGCTACCGATaGGCCCTTCCATCAGTCAAGGCATTTGGACATTAC | + |
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Preference number: 3 (lower is better) Translates to: RGGSGLANCSYR*ALPSVKAFGHY Trigger: GTAATGTCCAAATGCCTTGACTGATGGAAGGGCGCATCGGTAGCTACAGTTGGCAAGCCCACTCCCTCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | GCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTaGCTATGCACAGCAGCAATTACAGACATGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: AGSWLWVLVSLL*LCTAAITDMAE Trigger: TTCAGCCATGTCTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR-3UTR CAA 90 bp | TATCAAGAGTTTTATACAAGTCGATGGGATGCACACGCAGCAGGGGGACTCCAGAGGGGTGCCATGTTCTaGTCCTTGCTCCTCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: YQEFYTSRWDAHAAGGLQRGAMF*SLLLWD Trigger: ATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCT...CTGGAGTCCCCCTGCTGCGTGTGCATCCCATCGACTTGTATAAAACTCTTGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| 3UTR GCA 72 bp | TCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATaGACAGCAGCAATTACAGACATGGCTGAAATCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SWLWVLVSLLCL*TAAITDMAEIA Trigger: TGCGATTTCAGCCATGTCTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR GCA 72 bp | TCCTTAGTATCAAGAGTTTTATACAAGTCGATGGGATaGACACGCAGCAGGGGGACTCCAGCAGTTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: SLVSRVLYKSMG*TRSRGTPAVHT Trigger: TGTGTGAACTGCTGGAGTCCCCCTGCTGCGTGTGCATCCCATCGACTTGTATAAAACTCTTGATACTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGCCTCGTCTCTCTTCTTaGCCTATGCACAGCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPPRLSS*PMHSSN Trigger: ATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGG...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR TCA 72 bp | GGGATGGGAATGCAACCAAGGTATAAAATAGGCCAATaGAGACAATCTGCACAGGGGTGGACAGGACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: GMGMQPRYKIGQ*RQSAQGWTGHD Trigger: ATCATGTCCTGTCCACCCCTGTGCAGATTGTCTTCATTGGCCTATTTTATACCTTGGTTGCATTCCCATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR TCA 72 bp | TCATATACTCTCATCACAAAAATATTCCCAGTGCTGTaGCTGGAGCGTTCTTTCCTTCTGATTACCTCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SYTLITKIFPVL*LERSFLLITSP Trigger: CGGGGAGGTAATCAGAAGGAAAGAACGCTCCAGTCACAGCACTGGGAATATTTTTGTGATGAGAGTATATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR CCA 72 bp | GCACAGCAGCAATTACAGACATGGCTGAAATCGCAGTaGATTCCAGAGAAAGCCAGAATTAAACACGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: AQQQLQTWLKSQ*IPEKARIKHDK Trigger: TTTATCGTGTTTAATTCTGGCTTTCTCTGGAATCCACTGCGATTTCAGCCATGTCTGTAATTGCTGCTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR TCA 72 bp | CAAGGCATTTGGACATTACCTTCTTATCTAATACCATaGCGAAAGGTTCTGGAGAGAAGAAAGGAAATCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGIWTLPSYLIP*RKVLERRKEIE Trigger: CTCGATTTCCTTTCTTCTCTCCAGAACCTTTCGTCATGGTATTAGATAAGAAGGTAATGTCCAAATGCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCAGAAGGCCGGCAGCATaGCCGGGACCCTCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRARGRQDGRTSPAPTRRRRPAA*PGPSLL Trigger: CAGCAGTGAGGGTCCCGGCCATGCTGCCGGCCTTCT...GCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | GCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGCGCTaGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPPIAWAVR*GRVMALGPRLS Trigger: AGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCAGGGCAGACTGGGGCTGGAGGTaGGGTTTTGGGTCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQDGRTSPAPTRRRADWGWR*GFGSVQ Trigger: CTGAACAGACCCAAAACCCCACCTCCAGCCCCAGTC...TGCCCTGCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | CCTGTTTCCTTCCGGTTGCGGGGTCCTCCCCGCCCATaGCGTGGGCGGTGCGCTTGGGCAGGGTCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSFRLRGPPRP*RGRCAWAGSWL Trigger: GAGCCATGACCCTGCCCAAGCGCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACGGAGGTGGCAGGCGCTaGGCTGCACCGAGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPCSSGMRCKSTGPGGDGGGRR*AAPSPS Trigger: GCTGGGACTCGGTGCAGCTCAGCGCCTGCCACCTCC...GTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR TCA 90 bp | TGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCACACTGCAGCCTGGGTaGGGAGTGGTGGCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CAASPQGPGETGWQNQPSTLQPG*GVVAAG Trigger: CCCTGCAGCCACCACTCCTCACCCAGGCTGCAGTGT...GCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCAGGGCACACAGGAATAGGGACTaGGGCTGGAGGTGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQDGRTSPAPTRRRAHRNRD*GWRWGF Trigger: AAAACCCCACCTCCAGCCCCAGTCCCTATTCCTGTG...TGCCCTGCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRARGRQDGRTSPAPTRRFGQNH*ISSGGA Trigger: TGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAA...GCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAAGAAGGCCGGCAGCATaGCCGGGACCCTCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLAPLGCAASPQGPGETRRPAA*PGPSLL Trigger: CAGCAGTGAGGGTCCCGGCCATGCTGCCGGCCTTCT...TGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGGGCACACTGCAGCCTaGGTGAGGAGTGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGMRCKSTGPGGDRMAEPGHTAA*VRSGGC Trigger: GCAGCCACCACTCCTCACCCAGGCTGCAGTGTGCCC...TGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGGTCTGGCTCCCGCTCTaGACAGGCACGTGCGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGNRQMEVPALGPALHWVWLPL*TGTCDH Trigger: GTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGAC...CCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCAGGGCAAGATCCAGATCTGATTaGCCCACTCATCACGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQDGRTSPAPTRRRARSRSD*PTHHGS Trigger: AGATCCGTGATGAGTGGGGCAATCAGATCTGGATCT...TGCCCTGCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114907.2 |
||
| CDS-3UTR CCA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACTCCCAGCCCAGCGCCTaGCAGATCTGCGCCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNSQPSA*QICATE Trigger: CTCGGTGGCGCAGATCTGCCAGGCGCTGGGCTGGGA...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCATGGGAGGCTGTGGTaGTGGAGGGGCCAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPALHWSFLQQHAAGAHGRLW*WRGQIS Trigger: GCTGATCTGGCCCCTCCATCACCACAGCCTCCCATG...AGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGGGACAGATCCAGATCTaGTTGCCCCACTCATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: APLGCAASPQGPGETGWQGQIQI*LPHSSR Trigger: CCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCC...CTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGCTCTGCACAGGCACGTaGGATCACAGCATCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: APLGCAASPQGPGETGWQLCTGT*DHSIDG Trigger: TCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAG...CTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCTCTGCACAGGCACGTaGGATCACAGCATCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: CAASPQGPGETGWQNQPSLCTGT*DHSIDG Trigger: TCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAG...GCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGGGGCTCCCAGCTTTaGCTTCCGTACCACCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLWDALQVHRARGRQDGRGSQL*LPYHLI Trigger: GATGAGGTGGTACGGAAGGCAAAGCTGGGAGCCCCT...GCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGCACAGGAATAGGGACTaGGGCTGGAGGTGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APLGCAASPQGPGETGWQHRNRD*GWRWGF Trigger: AAAACCCCACCTCCAGCCCCAGTCCCTATTCCTGTG...CTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCGGATGGCATCAGGGCTaGGCACACTGCAGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRASPPLEFSSATCCGSGWHQG*AHCSLG Trigger: ACCCAGGCTGCAGTGTGCCCAGCCCTGATGCCATCC...GCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCATGGGAGGCTGTGGTaGTGGAGGGGCCAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSIQRGAMFLSLLLWDALHGRLW*WRGQIS Trigger: GCTGATCTGGCCCCTCCATCACCACAGCCTCCCATG...CAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGCTGGAGGAGCAGCCATaGTTCCCACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPALGPALHWSFLQQHAALEEQP*FPHRAS Trigger: ACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAG...CGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGGCGGTGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTAGGGGCTCCCAGCTTTaGCTTCCGTACCACCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGRCAWAGSWLWVLVSLLRGSQL*LPYHLI Trigger: GATGAGGTGGTACGGAAGGCAAAGCTGGGAGCCCCT...AAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCCGTCATCAGGCTTGTTaGACCCTGGACAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCAASPQGPGETGWQNQPRHQAC*TLDRSR Trigger: TCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACG...GGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGATCAGCCCTGTCCTaGACACGCACAGGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGNRQMEVPALGPALHWRSALS*TRTGES Trigger: GCTCTCTCCTGTGCGTGTCCAGGACAGGGCTGATCT...CCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCAGATATATGGGAAGGTaGGAGGCATGTTGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTGPGGDRMAEPAQPRPRYMGR*EACWKG Trigger: CCCCTTCCAACATGCCTCCCACCTTCCCATATATCT...GGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGGGGGATAACTGGACTTaGGGCAGGGATGACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVLAPLGCAASPQGPGEGDNWT*GRDDRL Trigger: GAGCCTGTCATCCCTGCCCCAAGTCCAGTTATCCCC...CTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGGGATGGCATCAGGGCTaGGCACACTGCAGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSIQRGAMFLSLLLWDALGWHQG*AHCSLG Trigger: ACCCAGGCTGCAGTGTGCCCAGCCCTGATGCCATCC...CAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCACTGCATCTCTTCTaGAGGAGCAGCCATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CAASPQGPGETGWQNQPSPLHLF*RSSHDS Trigger: GGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGG...GCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGCCACTGCATCTCTTCTaGAGGAGCAGCCATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: APLGCAASPQGPGETGWQPLHLF*RSSHDS Trigger: GGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGG...CTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACCGGGACCCTCACTGCTaGAGGGCTGAACAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNRDPHC*RAEQRQ Trigger: CTGCCTTTGTTCAGCCCTTCAGCAGTGAGGGTCCCG...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGAGATGTCAATTGCCTGTTTCCTTCCGGTTGCGGGGTCCTCCCCGCCCAACACTGCAGCCTGGGTaGGGAGTGGTGGCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRCQLPVSFRLRGPPRPTLQPG*GVVAAG Trigger: CCCTGCAGCCACCACTCCTCACCCAGGCTGCAGTGT...TGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGGCAATTGACATCTCAAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGGAGGAGCAGCCATaGTTCCCACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRCQPSGQPSTGVFFSNMLEEQP*FPHRAS Trigger: ACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAG...CATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCCCAAGGGCACCTGCATaGCTTCTGCTGAGGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CAWAGSWLWVLVSLLCLCPRAPA*LLLRCP Trigger: GGGGCACCTCAGCAGAAGCCATGCAGGTGCCCTTGG...GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | GGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGTTATTGGAGGAAGTaGAGGCTTTTGGAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GCAASPQGPGETGWQNQPSYWRK*RLLEWR Trigger: GCGCCACTCCAAAAGCCTCCACTTCCTCCAATAACT...GGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTAGAGAGGGCGGGAGCTaGGGATGGCATCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPLEFSSATCCGSSGPCREGGS*GWHQGW Trigger: CCAGCCCTGATGCCATCCCCAGCTCCCGCCCTCTCT...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGACCACTGCATCTCTTCTaGAGGAGCAGCCATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLAPLGCAASPQGPGETGPLHLF*RSSHDS Trigger: GGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGG...TCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | AGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTaGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSIQRGAMFLS*LLWDALQVHRA Trigger: GGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACATGGCCAGGGACTTGGTaGAGTTATTGGAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLAPLGCAASPQGPGETWPGTW*SYWRKW Trigger: CCACTTCCTCCAATAACTTCACCAAGTCCCTGGCCA...TGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTCTGGCTCCCGCTCTaGACAGGCACGTGCGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPLEFSSATCCGSSGPCVWLPL*TGTCDH Trigger: GTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGAC...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGGCGGTGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTCGTCATCAGGCTTGTTaGACCCTGGACAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGRCAWAGSWLWVLVSLLRHQAC*TLDRSR Trigger: TCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACG...AAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCACCGCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGCTTAGCCTCCGGGGCTaGTACCACCTTGCTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGPALHWSFLQQHAALSLRG*YHLADN Trigger: GTTATCAGCAAGGTGGTACCAGCCCCGGAGGCTAAG...CGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | ATCAACTTGAGATGTCAATTGCCTGTTTCCTTCCGGTaGCGGGGTCCTCCCCGCCCATTGCGTGGGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: INLRCQLPVSFR*RGPPRPLRGRC Trigger: GCACCGCCCACGCAATGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGGCAATTGACATCTCAAGTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGPALHWSFLQQHAAFGQNH*ISSGGA Trigger: TGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAA...CGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTAGATCAGCCCTGTCCTaGACACGCACAGGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REHPEGCHVLVLAPLGCARSALS*TRTGES Trigger: GCTCTCTCCTGTGCGTGTCCAGGACAGGGCTGATCT...AGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCAAATGGAGCCAGCATaGGAGGCTGTGGTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQPSTGVFFSNMLRELRQMEPA*EAVVME Trigger: CTCCATCACCACAGCCTCCCATGCTGGCTCCATTTG...CCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCAAACTCGAAAGGGTCTaGCTCCCGCTCTGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGVPCSCPCSSGMRCKSKLERV*LPLCTG Trigger: GCCTGTGCAGAGCGGGAGCCAGACCCTTTCGAGTTT...GGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCAGGTGGGAGGCATGTTaGAAGGGGCTCCCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QREHPEGCHVLVLAPLGCRWEAC*KGLPAL Trigger: CAAAGCTGGGAGCCCCTTCCAACATGCCTCCCACCT...GCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCCAGACGAAGGCAGCTTaGCTTTCTCCTCATACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRASPPLEFSSATCCGSQTKAA*LSPHTP Trigger: AGGGGTATGAGGAGAAAGCCAAGCTGCCTTCGTCTG...GCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGCACACTGCAGCCTaGGTGAGGAGTGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVSEGASRGVPCSCPCSSGHTAA*VRSGGC Trigger: GCAGCCACCACTCCTCACCCAGGCTGCAGTGTGCCC...AGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PLGCAASPQGPGETGWQNRLVAP*TDPDLI Trigger: AATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCT...GTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGACCACTGCATCTCTTCTaGAGGAGCAGCCATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIGRWRCQPSGQPSTGPLHLF*RSSHDS Trigger: GGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGG...TCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGGTGACTTAGTTTTCTaGCCTGGAGAGCTAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSSGMRCKSTGPGGDRMAGDLVF*PGELAL Trigger: TAAAGCTAGCTCTCCAGGTCAGAAAACTAAGTCACC...TGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTCGGGACCCTCACTGCTaGAGGGCTGAACAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAHVFQREHPEGCHVLVLRDPHC*RAEQRQ Trigger: CTGCCTTTGTTCAGCCCTTCAGCAGTGAGGGTCCCG...AAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCGGACAGATCCAGATCTaGTTGCCCCACTCATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGVPCSCPCSSGMRCKSGQIQI*LPHSSR Trigger: CCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCC...GGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGGACAGATCCAGATCTaGTTGCCCCACTCATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PALHWSFLQQHAAGAQAHGQIQI*LPHSSR Trigger: CCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCC...ATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTCTGGAGGAGCAGCCATaGTTCCCACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAHVFQREHPEGCHVLVLLEEQP*FPHRAS Trigger: ACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAG...AAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCACAGGCTTTTTCGGCTaGATTTCAATGTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGPGGDRMAEPAQPRPTGFFG*ISMFSF Trigger: GAAACTGAACATTGAAATGCAGCCGAAAAAGCCTGT...GGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACCGTCATCAGGCTTGTTaGACCCTGGACAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNRHQAC*TLDRSR Trigger: TCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACG...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVPALGPALHWSFLQQHAFGQNH*ISSGGA Trigger: TGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAA...AGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGTTCAGGACTGTCCAGTaGCCTCTTACCCAAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLVLAPLGCAASPQGPGEFRTVQ*PLTQEV Trigger: AACTTCTTGGGTAAGAGGCCACTGGACAGTCCTGAA...CTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCACGATCACAGCATCGATaGAGTCATCGATGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSGMRCKSTGPGGDRMARSQHR*SHRWFC Trigger: ACAAAACCATCGATGACTCCATCGATGCTGTGATCG...TGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGAGTTATTGGAGGAAGTaGAGGCTTTTGGAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSGQPSTGVFFSNMLRESYWRK*RLLEWR Trigger: GCGCCACTCCAAAAGCCTCCACTTCCTCCAATAACT...CTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCCTGGAGGAGCAGCCATaGTTCCCACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MCFRGSIQRGAMFLSLLLLEEQP*FPHRAS Trigger: ACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAG...GAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGAGCGCCTGGCAGATCTaGGCCACCGAGACCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HGSGSSSLFFAYAQQQLQSAWQI*ATETLN Trigger: GTTGAGGGTCTCGGTGGCGCAGATCTGCCAGGCGCT...CTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PALHWSFLQQHAAGAQAHFGQNH*ISSGGA Trigger: TGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAA...ATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCCTTGAGAAGACACGATaGGGGGAAGGTAATCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPCSCPCSSGMRCKSTGPLEKTR*GEGNPE Trigger: TTCCGGATTACCTTCCCCCCATCGTGTCTTCTCAAG...GGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACAGTTTCACAACTTCTaGGGGAGTCTGTGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGMRCKSTGPGGDRMAEQFHNF*GSLCWF Trigger: AAACCAACACAGACTCCCCCAGAAGTTGTGAAACTG...TTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACACGATCACAGCATCGATaGAGTCATCGATGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLAPLGCAASPQGPGETRSQHR*SHRWFC Trigger: ACAAAACCATCGATGACTCCATCGATGCTGTGATCG...TGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TGNRQMEVPALGPALHWSRLVAP*TDPDLI Trigger: AATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCT...ACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | TGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTaGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFRGSIQRGAMF*SLLLWDALQVH Trigger: GTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTTTGGTGTTTCAGGTCTaGCAGGGGTTTGGGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: REHPEGCHVLVLAPLGCALVFQV*QGFGEH Trigger: ATGTTCCCCAAACCCCTGTCAGACCTGAAACACCAA...AGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTTCACTGCTGAAGGGCTaGACAAAGGCAGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: REHPEGCHVLVLAPLGCASLLKG*TKAVPF Trigger: AAATGGCACTGCCTTTGTTCAGCCCTTCAGCAGTGA...AGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGCTGAACAAAGGCAGTaGCATTTCTTTTGGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPCSCPCSSGMRCKSTGPAEQRQ*HFFWGQ Trigger: TTGCCCCCAAAAGAAATGGCACTGCCTTTGTTCAGC...GGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGAGATCCAGATCTGATTaGCCCACTCATCACGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSIQRGAMFLSLLLWDALRSRSD*PTHHGS Trigger: TGATCCGTGATGAGTGGGGCAATCAGATCTGGATCT...CAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAACATCATCCAAAATaGGGTCTGTTCGGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPALHWSFLQQHAAGAQHHPK*GLFGHR Trigger: TCTATGGCCGAACAGACCCCATTTTGGATGATGTTG...AGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCCAGTTTCACAACTTCTaGGGGAGTCTGTGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRASPPLEFSSATCCGSQFHNF*GSLCWF Trigger: AAACCAACACAGACTCCCCCAGAAGTTGTGAAACTG...GCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCGACTGGGGCTGGAGGTaGGGTTTTGGGTCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MCFRGSIQRGAMFLSLLLDWGWR*GFGSVQ Trigger: CTGAACAGACCCAAAACCCCACCTCCAGCCCCAGTC...GAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCAGCAGTTCACACAGTGGGATGGGAATGCAACCAAGGTATAAAATAGGCAGAGAGGGCGGGAGCTaGGGATGGCATCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSSSHSGMGMQPRYKIGREGGS*GWHQGW Trigger: CCAGCCCTGATGCCATCCCCAGCTCCCGCCCTCTCT...GCCTATTTTATACCTTGGTTGCATTCCCATCCCACTGTGTGAACTGCTGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTCTTGGAGCGTCCAGGTaGCTTCTTTTCTTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: REHPEGCHVLVLAPLGCALGASR*LLFFWD Trigger: ATCCCAAAAGAAAAGAAGTCACCTGGACGCTCCAAG...AGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCGGATCACATAAGTGCTaGCCGTCTCAGTCACGACGC | + |
|
Preference number: 4 (lower is better) Translates to: MCFRGSIQRGAMFLSLLLGSHKC*PSQSRR Trigger: GCGTCGTGACTGAGACGGTCAGCACTTATGTGATCC...GAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGATCACATAAGTGCTaGCCGTCTCAGTCACGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CVSEGASRGVPCSCPCSSGSHKC*PSQSRR Trigger: GCGTCGTGACTGAGACGGTCAGCACTTATGTGATCC...AGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCAGATCCAGATCTGATTaGCCCACTCATCACGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGVPCSCPCSSGMRCKSRSRSD*PTHHGS Trigger: TGATCCGTGATGAGTGGGGCAATCAGATCTGGATCT...GGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCCAAATGGAGCCAGCATaGGAGGCTGTGGTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCFRGSIQRGAMFLSLLLQMEPA*EAVVME Trigger: CTCCATCACCACAGCCTCCCATGCTGGCTCCATTTG...GAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGGGGGATAACTGGACTTaGGGCAGGGATGACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGSGSSSLFFAYAQQQLQGDNWT*GRDDRL Trigger: GAGCCTGTCATCCCTGCCCCAAGTCCAGTTATCCCC...CTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTCTGGAGGTGGGGTTTTaGGTCTGTTCAGAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAHVFQREHPEGCHVLVLLEVGF*VCSEKE Trigger: CTCCTTCTCTGAACAGACCCAAAACCCCACCTCCAG...AAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCTTGGTGTTTCAGGTCTaGCAGGGGTTTGGGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PMCFRGSIQRGAMFLSLLLVFQV*QGFGEH Trigger: ATGTTCCCCAAACCCCTGTCAGACCTGAAACACCAA...GAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGTGGGGGAGTCTGTGTTaGTTTCATCACTGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFFSNMLRELRPMCFRGWGSLC*FHHWDG Trigger: ACCATCCCAGTGATGAAACCAACACAGACTCCCCCA...CCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCAGTGCCATTTCTTTTaGGGGCAACACCAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PMCFRGSIQRGAMFLSLLQCHFF*GQHQLC Trigger: ACACAGCTGGTGTTGCCCCCAAAAGAAATGGCACTG...GAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCAGTGCCATTTCTTTTaGGGGCAACACCAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPMCFRGSIQRGAMFLSLQCHFF*GQHQLC Trigger: ACACAGCTGGTGTTGCCCCCAAAAGAAATGGCACTG...CAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGTTAACTCCCATAAGTTaGAAGGCTTCACCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: WRCQPSGQPSTGVFFSNMLTPIS*KASPTS Trigger: TGATGTTGGTGAAGCCTTCCAACTTATGGGAGTTAA...CATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | TCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGTGTTGGTTTCATCACTaGGATGGTCTCTTTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQPSTGVFFSNMLRELRCWFHH*DGLFNS Trigger: ACTGTTAAAGAGACCATCCCAGTGATGAAACCAACA...CCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTTGGGGGAGTCTGTGTTaGTTTCATCACTGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVFQREHPEGCHVLVLAPWGSLC*FHHWDG Trigger: ACCATCCCAGTGATGAAACCAACACAGACTCCCCCA...AGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTAGATATATGGGAAGGTaGGAGGCATGTTGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVFQREHPEGCHVLVLAPRYMGR*EACWKG Trigger: CCCCTTCCAACATGCCTCCCACCTTCCCATATATCT...AGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGCAGACGAAGGCAGCTTaGCTTTCTCCTCATACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGSGSSSLFFAYAQQQLQQTKAA*LSPHTP Trigger: AGGGGTATGAGGAGAAAGCCAAGCTGCCTTCGTCTG...CTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVFFSNMLRELRPMCFRGRLVAP*TDPDLI Trigger: AATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCT...CCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTGCTGAACAAAGGCAGTaGCATTTCTTTTGGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HVFQREHPEGCHVLVLAPAEQRQ*HFFWGQ Trigger: TTGCCCCCAAAAGAAATGGCACTGCCTTTGTTCAGC...AGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | CCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCGATCTGGTGGTAAAGTaGAGAGCAGAAACAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PMCFRGSIQRGAMFLSLLDLVVK*RAETDG Trigger: ACCATCTGTTTCTGCTCTGCACTTTACCACCAGATC...GAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114907.2 |
||
| CDS-3UTR CCA 90 bp | AGATGTGTGGCGTCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGAGTTCAGAGTACCGATaGCAGCCCCGGCCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCVASLLILVTGNRQMEVSSEYR*QPRPSC Trigger: GCAGCTGGGCCGGGGCTGCCATCGGTACTCTGAACT...CACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGACGCCACACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | AAGGTTCTGGAGAGAAGAAAGGAAATCGAGAGGGCAGATGTGTGGCGTCTTTATAAACTCGAAAGGGTCTaGCTCCCGCTCTGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVLERRKEIERADVWRLYKLERV*LPLCTG Trigger: GCCTGTGCAGAGCGGGAGCCAGACCCTTTCGAGTTT...ATAAAGACGCCACACATCTGCCCTCTCGATTTCCTTTCTTCTCTCCAGAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCTTAGCCTCCGGGGCTaGTACCACCTTGCTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLILVTGNRQMEVPALGLSLRG*YHLADN Trigger: GTTATCAGCAAGGTGGTACCAGCCCCGGAGGCTAAG...CCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGGGAAATGAAGGAATTTaGTGTGGGAAAGTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFFSNMLRELRPMCFRGGNEGI*CGKVTG Trigger: ACCTGTCACTTTCCCACATCAAATTCCTTCATTTCC...CCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | CATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCACAGCAGCAATTACAGTTCAGGACTGTCCAGTaGCCTCTTACCCAAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGSGSSSLFFAYAQQQLQFRTVQ*PLTQEV Trigger: AACTTCTTGGGTAAGAGGCCACTGGACAGTCCTGAA...CTGTAATTGCTGCTGTGCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCAATTACAGACATGGCTGAAATCGCAGTGGATTCCAGAGAAAGCCAGATCACTGCTGAAGGGCTaGACAAAGGCAGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQLQTWLKSQWIPEKARSLLKG*TKAVPF Trigger: AAATGGCACTGCCTTTGTTCAGCCCTTCAGCAGTGA...TCTGGCTTTCTCTGGAATCCACTGCGATTTCAGCCATGTCTGTAATTGCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | AGATGTGTGGCGTCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGAGGTGCCCCCATCAGTaGGCACCTGTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCVASLLILVTGNRQMEVRCPHQ*APVPLP Trigger: AGGAAGAGGAACAGGTGCCCACTGATGGGGGCACCT...CACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGACGCCACACATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGTGTTGGTTTCATCACTaGGATGGTCTCTTTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFFSNMLRELRPMCFRGCWFHH*DGLFNS Trigger: ACTGTTAAAGAGACCATCCCAGTGATGAAACCAACA...CCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGTGGCCAGGGACTTGGTaGAGTTATTGGAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPWPGTW*SYWRKW Trigger: CCACTTCCTCCAATAACTTCACCAAGTCCCTGGCCA...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTCTGGAGAGAAGAAAGGAAATCGAGAGGGCAGATGTGTGGCGTCTTTATCTTGGAGCGTCCAGGTaGCTTCTTTTCTTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVLERRKEIERADVWRLYLGASR*LLFFWD Trigger: ATCCCAAAAGAAAAGAAGTCACCTGGACGCTCCAAG...ATAAAGACGCCACACATCTGCCCTCTCGATTTCCTTTCTTCTCTCCAGAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTGTCTCCTCCAAAAAGCACTAATGGGTATACTTGTGCATGTGAAAATAAGGTGGGAGGCATGTTaGAAGGGGCTCCCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLQKALMGILVHVKIRWEAC*KGLPAL Trigger: CAAAGCTGGGAGCCCCTTCCAACATGCCTCCCACCT...TATTTTCACATGCACAAGTATACCCATTAGTGCTTTTTGGAGGAGACAAAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| 3UTR CAA 72 bp | GTAGCTACCGATGCGCCCTTCCATCAGTCAAGGCATTaGGACATTACCTTCTTATCTAATACCATGACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VATDAPFHQSRH*DITFLSNTMTK Trigger: TTTCGTCATGGTATTAGATAAGAAGGTAATGTCCAAATGCCTTGACTGATGGAAGGGCGCATCGGTAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGACAGGCTTTTTCGGCTaGATTTCAATGTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPTGFFG*ISMFSF Trigger: GAAACTGAACATTGAAATGCAGCCGAAAAAGCCTGT...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GGATGGCATCAGGGCTGGGCACACTGCAGCCTGGGTGAGGAGTGGTaGCTGCAGGGGAGTAGGGCTCACTCGCACAGGAATAGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWHQGWAHCSLGEEW*LQGSRAHSHRNRDW Trigger: CCAGTCCCTATTCCTGTGCGAGTGAGCCCTACTCCCCTGCAGCCACCACTCCTCACCCAGGCTGCAGTGTGCCCAGCCCTGATGCCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACGCAGTGCCATTTCTTTaGGGGGCAACACCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPQGPGETGWQNQPSPDAVPFL*GATPAV Trigger: CACAGCTGGTGTTGCCCCCAAAAGAAATGGCACTGC...GTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCCGGCGCTCTTTCTTTATCTTGTaGGCACACTTCGGGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HRARGRQDGRTSPAPTRRSFFIL*AHFGQN Trigger: GTTCTGCCCGAAGTGTGCCAACAAGATAAAGAAAGA...GCGCCGGGTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGACTGGGGGAGTCTGTGTaGGTTTCATCACTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLAPLGCAASPQGPGETGLGESV*VSSLGW Trigger: CCATCCCAGTGATGAAACCAACACAGACTCCCCCAG...TCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | AGCATGGGAGGCTGTGGTGATGGAGGGGCCAGATCAGCCCTGTCCTaGACACGCACAGGAGAGAGCACTGGTGGGGTCTTCTGTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SMGGCGDGGARSALS*TRTGESTGGVFCGF Trigger: AAACCCACAGAAGACCCCACCAGTGCTCTCTCCTGTGCGTGTCCAGGACAGGGCTGATCTGGCCCCTCCATCACCACAGCCTCCCATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS TCA 90 bp | GTGAGAAGGCCGGCAGCATGGCCGGGACCCTCACTGCTGAAGGGCTaGACAAAGGCAGTGCCATTTCTTTTGGGGGCAACACCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRRPAAWPGPSLLKG*TKAVPFLLGATPAV Trigger: CACAGCTGGTGTTGCCCCCAAAAGAAATGGCACTGCCTTTGTTCAGCCCTTCAGCAGTGAGGGTCCCGGCCATGCTGCCGGCCTTCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGAGTGGCCAGGGACTaGGTGAAGTTATTGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVLAPLGCAASPQGPGETGVARD*VKLLEE Trigger: TTCCTCCAATAACTTCACCAAGTCCCTGGCCACTCC...TGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCAAGGTGGGAGGCATGTaGGAAGGGGCTCCCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPCSCPCSSGMRCKSTGPKVGGM*EGAPSF Trigger: AAAGCTGGGAGCCCCTTCCAACATGCCTCCCACCTT...GGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGGCAGTGCCATTTCTTTaGGGGGCAACACCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPSGQPSTGVFFSNMLREAVPFL*GATPAV Trigger: CACAGCTGGTGTTGCCCCCAAAAGAAATGGCACTGC...CTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GGCCAGATCAGCCCTGTCCTGGACACGCACAGGAGAGAGCACTGGTaGGGTCTTCTGTGGGTTTATAGAGCTGAGGGGTTCTCGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQISPVLDTHRREHW*GLLWVYRAEGFSCF Trigger: GAAGCACGAGAACCCCTCAGCTCTATAAACCCACAGAAGACCCCACCAGTGCTCTCTCCTGTGCGTGTCCAGGACAGGGCTGATCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCGAGTCATCGATGGTTTaGTCTGTCACCACAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWDALQVHRARGRQDGRTESSMV*SVTTGF Trigger: AAAGCCTGTGGTGACAGACAAAACCATCGATGACTC...GGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTGCAACACCAGCTGTGTaGGAGGGGCCTTTATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGNRQMEVPALGPALHWSATPAV*EGPLSC Trigger: ACAAGATAAAGGCCCCTCCAACACAGCTGGTGTTGC...ACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCGCAACACCAGCTGTGTaGGAGGGGCCTTTATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPRASPPLEFSSATCCGSATPAV*EGPLSC Trigger: ACAAGATAAAGGCCCCTCCAACACAGCTGGTGTTGC...GCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAAGAAGTTCTCATCATaGATGACTTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLWDALQVHRARGRQDGKKFSS*MTSSSS Trigger: GGAGGAGGAGGAAGTCATCAATGATGAGAACTTCTT...GCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAAGAAGTTCTCATCATaGATGACTTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWDALQVHRARGRQDGRTKKFSS*MTSSSS Trigger: GGAGGAGGAGGAAGTCATCAATGATGAGAACTTCTT...GGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTGGGCAGGGTCATGGCTCTGGGTCCTCGTCTCTCTTCTTTGCCTATGCCTGGGGGAGTCTGTGTaGGTTTCATCACTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CAWAGSWLWVLVSLLCLCLGESV*VSSLGW Trigger: CCATCCCAGTGATGAAACCAACACAGACTCCCCCAG...GCATAGGCAAAGAAGAGAGACGAGGACCCAGAGCCATGACCCTGCCCAAGCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS GCA 90 bp | CGATTCCGATCCGGAAGAAAACTCGAAAGGGTCTGGCTCCCGCTCTaGACAGGCACGTGCGATCACAGCATCGATGGAGTCATCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFRSGRKLERVWLPL*TGTCDHSIDGVIDG Trigger: ACCATCGATGACTCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGACCCTTTCGAGTTTTCTTCCGGATCGGAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS GCA 90 bp | CACAGTCGTCACAGCCAATCATCGGGCTCCCGTCATCAGGCTTGTTaGACCCTGGACAGATCCAGATCTGATTGCCCCACTCATCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSRHSQSSGSRHQAC*TLDRSRSDCPTHHG Trigger: TCCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGAGCCCGATGATTGGCTGTGACGACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GGTCTGGCTCCCGCTCTGCACAGGCACGTGCGATCACAGCATCGATaGAGTCATCGATGGTTTTGTCTGTCACCACAGGCTTTTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLAPALHRHVRSQHR*SHRWFCLSPQAFSA Trigger: AGCCGAAAAAGCCTGTGGTGACAGACAAAACCATCGATGACTCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | AGTGTCTCCTTCCGATTCCGATCCGGAAGAAAACTCGAAAGGGTCTaGCTCCCGCTCTGCACAGGCACGTGCGATCACAGCATCGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVSFRFRSGRKLERV*LPLCTGTCDHSIDG Trigger: TCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGACCCTTTCGAGTTTTCTTCCGGATCGGAATCGGAAGGAGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GTCACAGCCAATCATCGGGCTCCCGTCATCAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATTGCCCCACTCATCACGGATCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTANHRAPVIRLVAP*TDPDLIAPLITDLV Trigger: CACCAGATCCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGAGCCCGATGATTGGCTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114907.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGACGAGTTATCTGAACTaGAGGTTCCGCTGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSIQRGAMFLSLLLWDALTSYLN*RFRWRE Trigger: CTCTCTCCAGCGGAACCTCAAGTTCAGATAACTCGT...CAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACTTGCTGATAACAATCTaGTCCTGGCCAGCGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNLLITI*SWPAPT Trigger: AGTTGGCGCTGGCCAGGACAAGATTGTTATCAGCAA...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTTTGCTGATAACAATCTaGTCCTGGCCAGCGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: EVPALGPALHWSFLQQHALLITI*SWPAPT Trigger: AGTTGGCGCTGGCCAGGACAAGATTGTTATCAGCAA...AGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCGGGGCTGGTACCACCTaGCTGATAACAATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGVPCSCPCSSGMRCKSGAGTT*LITILS Trigger: GGACAAGATTGTTATCAGCAAGGTGGTACCAGCCCC...GGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGCTGGAGGTGGGGTTTaGGGTCTGTTCAGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPLEFSSATCCGSSGPCAGGGV*GLFREG Trigger: TCCTTCTCTGAACAGACCCAAAACCCCACCTCCAGC...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACCAGCCCAGCCCCGACCTCTTCTTGTGCTTCTaGTCTTTCTTTATCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPQGPGETGWQNQPSPDLFLCF*SFFILL Trigger: CAACAAGATAAAGAAAGACAAGAAGCACAAGAAGAG...GTCGGGGCTGGGCTGGTTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | ACGGCTTTGCAATTGGTAGTTGTGACTTTGCAAATGGAGCCAGCATaGGAGGCTGTGGTGATGGAGGGGCCAGATCAGCCCTGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TALQLVVVTLQMEPA*EAVVMEGPDQPCPG Trigger: TCCAGGACAGGGCTGATCTGGCCCCTCCATCACCACAGCCTCCCATGCTGGCTCCATTTGCAAAGTCACAACTACCAATTGCAAAGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGACTTGGTGAAGTTATaGGAGGAAGTGGAGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPALGPALHWSFLQQHAADLVKL*EEVEAF Trigger: AAAAGCCTCCACTTCCTCCAATAACTTCACCAAGTC...CGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGGACTTGGTGAAGTTATaGGAGGAAGTGGAGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPSGQPSTGVFFSNMLREDLVKL*EEVEAF Trigger: AAAAGCCTCCACTTCCTCCAATAACTTCACCAAGTC...CTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTTTCTCCTCATACCCCTaGTGTAGAGGCTCAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPLEFSSATCCGSSGPCFSSYP*CRGSGV Trigger: CACTCCTGAGCCTCTACACAAGGGGTATGAGGAGAA...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACATCTCGATCTTTCTTCTaGTCCTTATGTTTCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLAPLGCAASPQGPGETSRSFF*SLCFSR Trigger: GCGAGAGAAACATAAGGACAAGAAGAAAGATCGAGA...TGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCTTTATCTTCTCATGTTaGTGCTTCTCCTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLWDALQVHRARGRQDGFIFSC*CFSFSF Trigger: GAAGGAGAAGGAGAAGCACAAACATGAGAAGATAAA...GCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGGGGCTGGTACCACCTaGCTGATAACAATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPLEFSSATCCGSSGPCGAGTT*LITILS Trigger: GGACAAGATTGTTATCAGCAAGGTGGTACCAGCCCC...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCCATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGGCTGGAGGTGGGGTTTaGGGTCTGTTCAGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPMCFRGSIQRGAMFLSLAGGGV*GLFREG Trigger: TCCTTCTCTGAACAGACCCAAAACCCCACCTCCAGC...CAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | CTGGCCAGCGCCAACTCGCAGAGTCAACCTGGGGATAACTGGACTTaGGGCAGGGATGACAGGCTCCACTTTTATCTTCTCATGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LASANSQSQPGDNWT*GRDDRLHFYLLMFV Trigger: CACAAACATGAGAAGATAAAAGTGGAGCCTGTCATCCCTGCCCCAAGTCCAGTTATCCCCAGGTTGACTCTGCGAGTTGGCGCTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GTCACAGCCAATCATCGGGCTCCCGTCATCAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATTGCCCCACTCATCACGGATCACATA | + |
|
Preference number: 5 (lower is better) Translates to: VTANHRAPVIRLVAP*TDPDLIAPLITDHI Trigger: TATGTGATCCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGAGCCCGATGATTGGCTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTCTAACGGCTTTGCAATaGGTAGTTGTGACTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGNRQMEVPALGPALHWSLTALQ*VVVTLQ Trigger: TTGCAAAGTCACAACTACCAATTGCAAAGCCGTTAG...ACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTACAGACGAAGGCAGCTaGGCTTTCTCCTCATACCCC | + |
|
Preference number: 5 (lower is better) Translates to: CVSEGASRGVPCSCPCSSTDEGS*AFSSYP Trigger: GGGGTATGAGGAGAAAGCCAAGCTGCCTTCGTCTGT...AGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGTTTTTCTGGGAGCATaGGTGAGAAGGCCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVSEGASRGVPCSCPCSSVFLGA*VRRPAA Trigger: TGCTGCCGGCCTTCTCACCAATGCTCCCAGAAAAAC...AGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCTCTTTCTTTATCTTGTaGGCACACTTCGGGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VPCSCPCSSGMRCKSTGPSFFIL*AHFGQN Trigger: GTTCTGCCCGAAGTGTGCCAACAAGATAAAGAAAGA...GGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCAAGGACAAGAACATGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCACTCTTCTTGTGCTTCTaGTCTTTCTTTATCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSSGMRCKSTGPGGDRMALFLCF*SFFILL Trigger: CAACAAGATAAAGAAAGACAAGAAGCACAAGAAGAG...TGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS GCA 90 bp | TCCCGTCATCAGGCTTGTTGCACCCTGGACAGATCCAGATCTGATTaGCCCACTCATCACGGATCTGGTGGTAAAGTGCAGAGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRHQACCTLDRSRSD*PTHHGSGGKVQSRN Trigger: GTTTCTGCTCTGCACTTTACCACCAGATCCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114907.2 |
||
| CDS CCA 90 bp | CTTTATCTTGTTGGCACACTTCGGGCAGAACCACTGCATCTCTTCTaGAGGAGCAGCCATGATTCCCACACAGGGCCAGTGGTACCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LYLVGTLRAEPLHLF*RSSHDSHTGPVVPI Trigger: GATTGGTACCACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAAGTGTGCCAACAAGATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTTTGGTAGTTGTGACTTaGCAAATGGAGCCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPLEFSSATCCGSSGPCLVVVT*QMEPAW Trigger: CCATGCTGGCTCCATTTGCAAAGTCACAACTACCAA...ACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AACTTGAGATGTCAATTGCCTGTTTCCTTCCGGTTGCGGGGTCCTCCCCGCCCAGAGTCATCGATGGTTTaGTCTGTCACCACAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NLRCQLPVSFRLRGPPRPESSMV*SVTTGF Trigger: AAAGCCTGTGGTGACAGACAAAACCATCGATGACTC...TGGGCGGGGAGGACCCCGCAACCGGAAGGAAACAGGCAATTGACATCTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGGGATGCGCTGCAAGTCCACAGGGCCCGGGGGAGACAGGATGGCAGAACTCTTCTTGTGCTTCTaGTCTTTCTTTATCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGMRCKSTGPGGDRMAELFLCF*SFFILL Trigger: CAACAAGATAAAGAAAGACAAGAAGCACAAGAAGAG...TTCTGCCATCCTGTCTCCCCCGGGCCCTGTGGACTTGCAGCGCATCCCAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCTCCACTGGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATTCTCGATCTTTCTTCTaGTCCTTATGTTTCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PALHWSFLQQHAAGAQAHSRSFF*SLCFSR Trigger: GCGAGAGAAACATAAGGACAAGAAGAAAGATCGAGA...ATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCCAGTGGAGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTGGGATGCTTATCTTTCTCCCGCTaGCTTCTTTCTCGATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QREHPEGCHVLVLAPLGCLSFSR*LLSRSF Trigger: GAAAGATCGAGAAAGAAGCAAGCGGGAGAAAGATAA...GCATCCCAGAGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGTTTTATACAAGTCGATGGGATGCACACGCAGCAGGGGGACTCCAGGTTTTTCTGGGAGCATaGGTGAGAAGGCCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YQEFYTSRWDAHAAGGLQVFLGA*VRRPAA Trigger: TGCTGCCGGCCTTCTCACCAATGCTCCCAGAAAAAC...CTGGAGTCCCCCTGCTGCGTGTGCATCCCATCGACTTGTATAAAACTCTTGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | AGATGGAGGTGCCAGCCCTCGGGCCAGCCCTCCACTGGAGTTTTCTTCAGCAACTTTATCTTCTCATGTTaGTGCTTCTCCTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RWRCQPSGQPSTGVFFSNFIFSC*CFSFSF Trigger: GAAGGAGAAGGAGAAGCACAAACATGAGAAGATAAA...GTTGCTGAAGAAAACTCCAGTGGAGGGCTGGCCCGAGGGCTGGCACCTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS GCA 90 bp | TTCTTGTCTTTCTTTATCTTGTTGGCACACTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCAGCCATGATTCCCACACAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSFFILLAHFGQNH*ISSGGAAMIPTQGQ Trigger: CTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAAGTGTGCCAACAAGATAAAGAAAGACAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | TGGGCGCTTCATGGAGGGCATTTCTTCCACTTCAGGACTGTCCAGTaGCCTCTTACCCAAGAAGTTCTCATCATTGATGACTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WALHGGHFFHFRTVQ*PLTQEVLIIDDFLL Trigger: GAGGAGGAAGTCATCAATGATGAGAACTTCTTGGGTAAGAGGCCACTGGACAGTCCTGAAGTGGAAGAAATGCCCTCCATGAAGCGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS CCA 90 bp | GCTCTGCACAGGCACGTGCGATCACAGCATCGATGGAGTCATCGATaGTTTTGTCTGTCACCACAGGCTTTTTCGGCTGCATTTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: ALHRHVRSQHRWSHR*FCLSPQAFSAAFQC Trigger: ACATTGAAATGCAGCCGAAAAAGCCTGTGGTGACAGACAAAACCATCGATGACTCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS GCA 90 bp | CTTGGGGCAGGGATGACAGGCTCCACTTTTATCTTCTCATGTTTGTaGTTCTCCTTCTCCTTCTCTCTCTTCTCTCTCTCCCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGAGMTGSTFIFSCL*FSFSFSLFSLSLLS Trigger: GGAGAGAAGGGAGAGAGAGAAGAGAGAGAAGGAGAAGGAGAAGCACAAACATGAGAAGATAAAAGTGGAGCCTGTCATCCCTGCCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
||
| CDS-3UTR CAA 90 bp | TATCAAGAGTTTTATACAAGTCGATGGGATGCACACGCAGCAGGGGGACTCCAGAGGTCTGACAGGGGTTaGGGGAACATGAGCTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: YQEFYTSRWDAHAAGGLQRSDRG*GNMSYN Trigger: ATTGTAGCTCATGTTCCCCAAACCCCTGTCAGACCT...CTGGAGTCCCCCTGCTGCGTGTGCATCCCATCGACTTGTATAAAACTCTTGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | TCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGCCAGCCCTCGGGTTCTCCTCATACCCCTaGTGTAGAGGCTCAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLILVTGNRQMEVPALGFSSYP*CRGSGV Trigger: CACTCCTGAGCCTCTACACAAGGGGTATGAGGAGAA...CCCGAGGGCTGGCACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTTTCTTCAGCAACATGCTGCGGGAGCTCAGGCCCATGTGTTTCAGAGGGTTATCTTTCTCCCGCTaGCTTCTTTCTCGATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: GVFFSNMLRELRPMCFRGLSFSR*LLSRSF Trigger: GAAAGATCGAGAAAGAAGCAAGCGGGAGAAAGATAA...CCCTCTGAAACACATGGGCCTGAGCTCCCGCAGCATGTTGCTGAAGAAAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | AGATGTGTGGCGTCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGAAGGTGGGAGGCATGTaGGAAGGGGCTCCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RCVASLLILVTGNRQMEVKVGGM*EGAPSF Trigger: AAAGCTGGGAGCCCCTTCCAACATGCCTCCCACCTT...CACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGACGCCACACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGACAGACGAAGGCAGCTaGGCTTTCTCCTCATACCCC | + |
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Preference number: 5 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPTDEGS*AFSSYP Trigger: GGGGTATGAGGAGAAAGCCAAGCTGCCTTCGTCTGT...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | TATCAAGAGTTTTATACAAGTCGATGGGATGCACACGCAGCAGGGGGACTCCAGTCTTTCTTTATCTTGTaGGCACACTTCGGGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: YQEFYTSRWDAHAAGGLQSFFIL*AHFGQN Trigger: GTTCTGCCCGAAGTGTGCCAACAAGATAAAGAAAGA...CTGGAGTCCCCCTGCTGCGTGTGCATCCCATCGACTTGTATAAAACTCTTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGACGAGTTATCTGAACTaGAGGTTCCGCTGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPTSYLN*RFRWRE Trigger: CTCTCTCCAGCGGAACCTCAAGTTCAGATAACTCGT...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | CATGTGTTTCAGAGGGAGCATCCAGAGGGGTGCCATGTTCTTGTCCTTGCTCCTCTCTTCTTGTGCTTCTaGTCTTTCTTTATCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HVFQREHPEGCHVLVLAPLFLCF*SFFILL Trigger: CAACAAGATAAAGAAAGACAAGAAGCACAAGAAGAG...AGGAGCAAGGACAAGAACATGGCACCCCTCTGGATGCTCCCTCTGAAACACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| CDS CCA 90 bp | CACAGGCTTTTTCGGCTGCATTTCAATGTTCAGTTTCACAACTTCTaGGGGAGTCTGTGTTGGTTTCATCACTGGGATGGTCTCTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: HRLFRLHFNVQFHNF*GSLCWFHHWDGLFN Trigger: GTTAAAGAGACCATCCCAGTGATGAAACCAACACAGACTCCCCCAGAAGTTGTGAAACTGAACATTGAAATGCAGCCGAAAAAGCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | GACTCCAGCAGTTCACACAGTGGGATGGGAATGCAACCAAGGTATAAAATAGGCATTAACTCCCATAAGTaGGAAGGCTTCACCAACATC | + |
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Preference number: 5 (lower is better) Translates to: DSSSSHSGMGMQPRYKIGINSHK*EGFTNI Trigger: GATGTTGGTGAAGCCTTCCAACTTATGGGAGTTAAT...GCCTATTTTATACCTTGGTTGCATTCCCATCCCACTGTGTGAACTGCTGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026888.11 |
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| CDS-3UTR CAA 90 bp | ACTCTTCACAGGTTGACTCCATTCCCACTTTTCTGCAATTTAACATCAAGGCCGTTGGTAGTTGTGACTTaGCAAATGGAGCCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLHRLTPFPLFCNLTSRPLVVVT*QMEPAW Trigger: CCATGCTGGCTCCATTTGCAAAGTCACAACTACCAA...CGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACCTGTGAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGCAATTACAGACATGGCTGAAATCGCAGTGGATTCCAGAGAAAGCCAGACTAACGGCTTTGCAATaGGTAGTTGTGACTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QQQLQTWLKSQWIPEKARLTALQ*VVVTLQ Trigger: TTGCAAAGTCACAACTACCAATTGCAAAGCCGTTAG...TCTGGCTTTCTCTGGAATCCACTGCGATTTCAGCCATGTCTGTAATTGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | AGATGTGTGGCGTCTTTATTAATACTTGTCACTGGTAATAGGCAGATGGAGGTGAGGTCTGACAGGGGTTaGGGGAACATGAGCTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RCVASLLILVTGNRQMEVRSDRG*GNMSYN Trigger: ATTGTAGCTCATGTTCCCCAAACCCCTGTCAGACCT...CACCTCCATCTGCCTATTACCAGTGACAAGTATTAATAAAGACGCCACACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTTGTCTCCTCCAAAAAGCACTAATGGGTATACTTGTGCATGTGAAAATAGGAGTGGCCAGGGACTaGGTGAAGTTATTGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TLCLLQKALMGILVHVKIGVARD*VKLLEE Trigger: TTCCTCCAATAACTTCACCAAGTCCCTGGCCACTCC...TATTTTCACATGCACAAGTATACCCATTAGTGCTTTTTGGAGGAGACAAAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | CTGACCGTCTCAGTCACGACGCTCCTCACGGGGGCTTaGGCACTCCCTATTCCAGAGAGGGCGGGAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTVSVTTLLTGA*ALPIPERAGAG Trigger: CCCAGCTCCCGCCCTCTCTGGAATAGGGAGTGCCAAAGCCCCCGTGAGGAGCGTCGTGACTGAGACGGTCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | GGCTGTGGTGATGGAGGGGCCAGATCAGCCCTGTCCTaGACACGCACAGGAGAGAGCACTGGTGGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCGDGGARSALS*TRTGESTGGVF Trigger: GAAGACCCCACCAGTGCTCTCTCCTGTGCGTGTCCAGGACAGGGCTGATCTGGCCCCTCCATCACCACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | CGCACAGGAATAGGGACTGGGGCTGGAGGTGGGGTTTaGGGTCTGTTCAGAGAAGGAGCGGGCTTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTGIGTGAGGGV*GLFREGAGLAS Trigger: GGAGGCTAAGCCCGCTCCTTCTCTGAACAGACCCAAAACCCCACCTCCAGCCCCAGTCCCTATTCCTGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | GCCTCCGGGGCTGGTACCACCTTGCTGATAACAATCTaGTCCTGGCCAGCGCCAACTCGCAGAGTCAACCTG | + |
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Preference number: 6 (lower is better) Translates to: ASGAGTTLLITI*SWPAPTRRVNL Trigger: CAGGTTGACTCTGCGAGTTGGCGCTGGCCAGGACAAGATTGTTATCAGCAAGGTGGTACCAGCCCCGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | GAAGGAGCGGGCTTAGCCTCCGGGGCTGGTACCACCTaGCTGATAACAATCTTGTCCTGGCCAGCGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: EGAGLASGAGTT*LITILSWPAPT Trigger: AGTTGGCGCTGGCCAGGACAAGATTGTTATCAGCAAGGTGGTACCAGCCCCGGAGGCTAAGCCCGCTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS GCA 72 bp | TCCGGAAGAAAACTCGAAAGGGTCTGGCTCCCGCTCTaGACAGGCACGTGCGATCACAGCATCGATGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGRKLERVWLPL*TGTCDHSIDGV Trigger: GACTCCATCGATGCTGTGATCGCACGTGCCTGTGCAGAGCGGGAGCCAGACCCTTTCGAGTTTTCTTCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | AGCCCTGTCCTGGACACGCACAGGAGAGAGCACTGGTaGGGTCTTCTGTGGGTTTATAGAGCTGAGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SPVLDTHRREHW*GLLWVYRAEGF Trigger: GAACCCCTCAGCTCTATAAACCCACAGAAGACCCCACCAGTGCTCTCTCCTGTGCGTGTCCAGGACAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS GCA 72 bp | CACAGCCAATCATCGGGCTCCCGTCATCAGGCTTGTTaGACCCTGGACAGATCCAGATCTGATTGCCCCACT | + |
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Preference number: 6 (lower is better) Translates to: HSQSSGSRHQAC*TLDRSRSDCPT Trigger: AGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGAGCCCGATGATTGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | GGGGCTGGTACCACCTTGCTGATAACAATCTTGTCCTaGCCAGCGCCAACTCGCAGAGTCAACCTGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: GAGTTLLITILS*PAPTRRVNLGI Trigger: TATCCCCAGGTTGACTCTGCGAGTTGGCGCTGGCCAGGACAAGATTGTTATCAGCAAGGTGGTACCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | CAATTGGTAGTTGTGACTTTGCAAATGGAGCCAGCATaGGAGGCTGTGGTGATGGAGGGGCCAGATCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QLVVVTLQMEPA*EAVVMEGPDQP Trigger: GGGCTGATCTGGCCCCTCCATCACCACAGCCTCCCATGCTGGCTCCATTTGCAAAGTCACAACTACCAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | AATCATCGGGCTCCCGTCATCAGGCTTGTTGCACCCTaGACAGATCCAGATCTGATTGCCCCACTCATCACG | + |
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Preference number: 6 (lower is better) Translates to: NHRAPVIRLVAP*TDPDLIAPLIT Trigger: CGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTGATGACGGGAGCCCGATGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| CDS CCA 72 bp | TCTGGAGGAGCAGCCATGATTCCCACACAGGGCCAGTaGTACCAATCGTCACAGTCGTCACAGCCAATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGGAAMIPTQGQ*YQSSQSSQPII Trigger: GATGATTGGCTGTGACGACTGTGACGATTGGTACCACTGGCCCTGTGTGGGAATCATGGCTGCTCCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026888.11 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| CDS GCA 72 bp | CAGGCTTGTTGCACCCTGGACAGATCCAGATCTGATTaGCCCACTCATCACGGATCTGGTGGTAAAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QACCTLDRSRSD*PTHHGSGGKVQ Trigger: CTGCACTTTACCACCAGATCCGTGATGAGTGGGGCAATCAGATCTGGATCTGTCCAGGGTGCAACAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114907.2 |
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| CDS CCA 72 bp | GCCAACTCGCAGAGTCAACCTGGGGATAACTGGACTTaGGGCAGGGATGACAGGCTCCACTTTTATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ANSQSQPGDNWT*GRDDRLHFYLL Trigger: GAGAAGATAAAAGTGGAGCCTGTCATCCCTGCCCCAAGTCCAGTTATCCCCAGGTTGACTCTGCGAGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 90 bp | GCACAGGCACGTGCGATCACAGCATCGATGGAGTCATCGATGGTTTaGTCTGTCACCACAGGCTTTTTCGGCTGCATTTCAATGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AQARAITASMESSMV*SVTTGFFGCISMFS Trigger: ACTGAACATTGAAATGCAGCCGAAAAAGCCTGTGGTGACAGACAAAACCATCGATGACTCCATCGATGCTGTGATCGCACGTGCCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS GCA 72 bp | TTCTTTATCTTGTTGGCACACTTCGGGCAGAACCACTaGATCTCTTCTGGAGGAGCAGCCATGATTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FFILLAHFGQNH*ISSGGAAMIPT Trigger: TGTGGGAATCATGGCTGCTCCTCCAGAAGAGATGCAGTGGTTCTGCCCGAAGTGTGCCAACAAGATAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026888.11 ENSMUST00000114906.2 ENSMUST00000114907.2 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | CGTGCGATCACAGCATCGATGGAGTCATCGATGGTTTaGTCTGTCACCACAGGCTTTTTCGGCTGCATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAITASMESSMV*SVTTGFFGCIS Trigger: TGAAATGCAGCCGAAAAAGCCTGTGGTGACAGACAAAACCATCGATGACTCCATCGATGCTGTGATCGCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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| CDS CAA 72 bp | TTGTTTCTAACGGCTTTGCAATTGGTAGTTGTGACTTaGCAAATGGAGCCAGCATGGGAGGCTGTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LFLTALQLVVVT*QMEPAWEAVVM Trigger: CATCACCACAGCCTCCCATGCTGGCTCCATTTGCAAAGTCACAACTACCAATTGCAAAGCCGTTAGAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026888.11 ENSMUST00000114909.2 |
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